>input_sequence_33448
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-----------------------------------------------ATGGCAGAAGGTCTTATACTTGTTGTGCTTTCG
AAAATCGCAGCTACCTTTGGAGGAGTTGCACTGAATGCAATTAGGTTGAAATTGGGGAAGGAAGGCAACATTTTACTTGA
AACAGAAAACATGATGAAACAAATTGAGATTGAATTTGAGATCATGCAGGCCTTCATAAGTCAAGTACATCCATATAGTG
AAAATAACCAAATTCTCAAAGCATGGCTGAAGCACATAAGGAAGATTGCCTCTGAAGTTGAGGATATCATCGACGAATAT
TCATTTCTCCTTGGAAAAATGGACAATGTAGAAGGTCTTCTGAATAAGGCACTCCATCGATCAAAGAGGGTGAAGGCATG
GAAAGATATTTCTGCTCAGCTCAAACAAGTACAAGAAAGACTTCAAAATCTATCAACTGTGAAAGAAAGATACGGCATAA
CAGTAGCTGCTGGACTTGGGGGTGGATCTTCACACCACAATGTTACTCGTAAGATGTACATGTCTGATTCTTCCTACTTA
AGTGATAATGACAATGAAGAAATCATAGGAAATGAAGATGAAGCAAAAAAGCTGACACAATGCATAAATGATGATGGTTT
GGATCGTACGATTATCTCCATCTGTGGAATGGGTGGTTCCGGCAAAACAACTCTTGTAAGCAGCATCTGTAGGAAACAAA
AAATCAGAAAGAACTTCGATTGCTATGCTTGGATCACGGTATCACCAAATTATCCCGTTGAAGATCTTCTAAGTAAACTG
ATCAAACAACTTTATATTCCTGATGAGCAAGCTGGTACAACTGATCCAACACATTTGGTGGATAAAATCCATAGTTACCT
CGGGAACAAGAGATACCTTATTGTCTTGGATGACATGTGGAATAGAGATTCTTGGTTATTCCTTGAACGAGCATTTGTCA
AGAATAAGTGCAGAAGTAGAGTCATCATTACTACTCGCACGGAAGCTGTTGCCTCATTTGCAGAGGATAACCAGACTATC
AGAATTGGTCTTCTTCCACAAAGAGAATCATGGGACCTCTTCAGCAGAAAAGCATTCTCAAGGCAAAACAGGGCAACATC
GGGATGCCCTCAAGGTCTTGTTCCCTGGGCAGAAAAAATTCTAGAGAGATGCCAAGGCTTGCCCCTCGCTATAGTAGCTA
TAGGGAGTCTCCTATCTTACAGAGAAATGGAGGAACATGAGTGGAAGCTATTCTACAATCAACTTAACTGGCAACTAACA
AATAATCCAGAGCTGAACTGGGTTTCAAGTTTTCTGAAGCTAAGCTTGGATGATCTTCCAAGCCACTTGAGGAACTGTTT
CTTGTACTGTGGGTTATTCCCCGAAAATTACCGAATACGACGGAAATGGATAATCAGATTGTGGGTAGCTGAAGGTTTCG
TTGAGGATCGCGGAACAGAGACGACCCTGGAGGAAGTCGCCGAGGATTACCTCAAAGAACTTGCTCAGCGCTCACTGATT
CAAGTGACGGAAAGAAATGAATACGGAAGGCCAAAAAGATTTCAGGTGCATGACCTTGTGAGAGAAATGACGCCGACCAT
ATCAAGAAAAGAGAGGTTCGCTCTTATCTGGAATAACCCAGACGTGACAGACGGCGGTGACGAAGCAAGCCGTGTATCAG
TGCATCGTGGAGGCCAGGTCTTTCAGCCAGGCCCAGCTTCACAACATCTGCGCTCATTTTTGTTGTTCGACAAGCATGTG
CCGGTTCCATGGATCTGCGCCGCTTCATCGAATTTCAGGCTGCTAAGGGTGTTGTGCCTCAGATACTCCCTCCTCGAGCA
CATCCCGGAAGCCATCACAGCTGGTCTGTTCAATCTGCACTACCTTGATTTCTCACGTACGAAAGTGAAGACCATACCAA
GATCAATAGCGAGGCTCAAGAAACTGCAGTCATTGCACCTCAGGTTTGCTCGTGTGATGGAGCTGCCACGTGAAATAGCG
ATGCTCTCAAGCCTCCGGCACTTATCTGTGAGCAACGATTTGTATGGCACATCAGTCACTGGTAGCATCTGGAAGCTCAA
GCACTTGCAGACTCTCCGTGAGGTGAAGGCCAACAAAGATTTGGTTCAAAATCTGGGGTGCCTCACGCAGCTAAGAAGCC
TGGGCATCACGGCAGTCCTTCCAAGCTACGGCGGGGACCTGTGGACTTCGATAGGGAAGATGACCGTCCTGACGAAACTG
GCGGTCGGAACTCGCGGCGAAAACGACGAAGTCCTCAGTTTGGACAAGTTCAAGCCGCTCAGAAACGTGGAGAAGTTTTA
CCTGACGGGCAAGCTGGAGAACGGGGTGCTCTTTCCGGTATCCGAGGGGTTTGACAAGCTCAAGGTCCTGACAAATGCGC
TGGTCCGGGCTGGCGCAGGACCCGCTCAAATCCTTGTCTGA---------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr2A_1_TraesCS2A01G421000
ACGCCACCCTAGTGGCTCAGGGCCTCTTTGGCTCAAACAAGAAGCGGAGGAAAAAATATAGCAATAATATTTTTTTCCTA
TGGGAGCACTATTTATACGTTTGGCTCAATGGAGCAAATAAAAAGGAGAGAATCCTTTGAACTCATTTCAAAAGAAAAAC
GCAGAAATTCTACCATCCGCTTGGACTGGTTTATA---TTTTCTATGCACGAAGAACGAGATTGGGACCCTTAGTGACAT
AAGGCTAGTCATAGTGGGAGTAACTTAGCTAATAACATAGCGCACTTCAAGAAATTTTTGCTTATGTGGCAAGTATTTAA
TGAGAGGTGGTAACATAATATATTACTGTAACATAGCGCTTTCCAAAACAAAATGAGTCTACAAGCTAATAAATGAAGTC
ATCTATGACACTACTATTATGTTACTTTGCATTATGAAGATAGTAACTTAGACCAGTGTCATATGCATAACATTAGTCTA
AGTTACTCCCCACTATGACCAGCCTAATAGCATTCTAATTATACTTTTCATGTAGTTTGACTTTGATTTGACCATTTTTA
TTAGGATTTCTATGTTTCCTCTATTCTTGTGAATCAAACACTTAAGTTTACAAAGTTCATGTGTTTTCCGATCATCTAGT
TTGCGCATGCATTCATATCATATTCCTATGTGTTTAGAATTATGCGAACCAAACGAGTCCTAAGCAGCAAGGACATTGGC
AATCACATGACCTAGGGGACTGAGTCCGTGATGCCTCCCAATAATAGAATTATCTCATTGTGTATGCTTTCCAATAATAG
CATTACCTCGCAGCTATTGAACAAGAAAATAATCTGATGATGTAAAAGGGACGTCGATGGCTTTGAAAATAGTAT-CTTT
TTTT--ATTAAGTATCTTATTGTGGATGAATTTGTGGTGTCTTACAAAGTGATTTTC-TCATTTCCTGCCAGTTACGAAA
TCACCGACGGGAGGGGTCAACCAGCTGAAGTAGTGAAGTCAGGAACCATGGCAGAAGGTCTTATACTTGTTGTGCTTTCG
AAAATCGCAGCTACCTTTGGAGGAGTTGCACTGAATGCAATTAGGTTGAAATTGGGGAAGGAAGGCAACATTTTACTTGA
AACAGAAAACATGATGAAACAAATTGAGATTGAATTTGAGATCATGCAGGCCTTCATAAGTCAAGTACATCCATATAGTG
AAAATAACCAAATTCTCAAAGCATGGCTGAAGCACATAAGGAAGATTGCCTCTGAAGTTGAGGATATCATCGACGAATAT
TCATTTCTCCTTGGAAAAATGGACAATGTAGAAGGTCTTCTGAATAAGGCACTCCATCGATCAAAGAGGGTGAAGGCATG
GAAAGATATTTCTGCTCAGCTCAAACAAGTACAAGAAAGACTTCAAAATCTATCAACTGTGAAAGAAAGATACGGCATAA
CAGTAGCTGCTGGACTTGGGGGTGGATCTTCACACCACAATGTTACTCGTAAGATGTACATGTCTGATTCTTCCTACTTA
AGTGATAATGACAATGAAGAAATCATAGGAAATGAAGATGAAGCAAAAAAGCTGACACAATGCATAAATGATGATGGTTT
GGATCGTACGATTATCTCCATCTGTGGAATGGGTGGTTCCGGCAAAACAACTCTTGTAAGCAGCATCTGTAGGAAACAAA
AAATCAGAAAGAACTTCGATTGCTATGCTTGGATCACGGTATCACCAAATTATCCCGTTGAAGATCTTCTAAGTAAACTG
ATCAAACAACTTTATATTCCTGATGAGCAAGCTGGTACAACTGATCCAACACATTTGGTGGATAAAATCCATAGTTACCT
CGGGAACAAGAGATACCTTATTGTCTTGGATGACATGTGGAATAGAGATTCTTGGTTATTCCTTGAACGAGCATTTGTCA
AGAATAAGTGCAGAAGTAGAGTCATCATTACTACTCGCACGGAAGCTGTTGCCTCATTTGCAGAGGATAACCAGACTATC
AGAATTGGTCTTCTTCCACAAAGAGAATCATGGGACCTCTTCAGCAGAAAAGCATTCTCAAGGCAAAACAGGGCAACATC
GGGATGCCCTCAAGGTCTTGTTCCCTGGGCAGAAAAAATTCTAGAGAGATGCCAAGGCTTGCCCCTCGCTATAGTAGCTA
TAGGGAGTCTCCTATCTTACAGAGAAATGGAGGAACATGAGTGGAAGCTATTCTACAATCAACTTAACTGGCAACTAACA
AATAATCCAGAGCTGAACTGGGTTTCAAGTTTTCTGAAGCTAAGCTTGGATGATCTTCCAAGCCACTTGAGGAACTGTTT
CTTGTACTGTGGGTTATTCCCCGAAAATTACCGAATACGACGGAAATGGATAATCAGATTGTGGGTAGCTGAAGGTTTCG
TTGAGGATCGCGGAACAGAGACGACCCTGGAGGAAGTCGCCGAGGATTACCTCAAAGAACTTGCTCAGCGCTCACTGATT
CAAGTGACGGAAAGAAATGAATACGGAAGGCCAAAAAGATTTCAGGTGCATGACCTTGTGAGAGAAATGACGCCGACCAT
ATCAAGAAAAGAGAGGTTCGCTCTTATCTGGAATAACCCAGACGTGACAGACGGCGGTGACGAAGCAAGCCGTGTATCAG
TGCATCGTGGAGGCCAGGTCTTTCAGCCAGGCCCAGCTTCACAACATCTGCGCTCATTTTTGTTGTTCGACAAGCATGTG
CCGGTTCCATGGATCTGCGCCGCTTCATCGAATTTCAGGCTGCTAAGGGTGTTGTGCCTCAGATACTCCCTCCTCGAGCA
CATCCCGGAAGCCATCACAGCTGGTCTGTTCAATCTGCACTACCTTGATTTCTCACGTACGAAAGTGAAGACCATACCAA
GATCAATAGCGAGGCTCAAGAAACTGCAGTCATTGCACCTCAGGTTTGCTCGTGTGATGGAGCTGCCACGTGAAATAGCG
ATGCTCTCAAGCCTCCGGCACTTATCTGTGAGCAACGATTTGTATGGCACATCAGTCACTGGTAGCATCTGGAAGCTCAA
GCACTTGCAGACTCTCCGTGAGGTGAAGGCCAACAAAGATTTGGTTCAAAATCTGGGGTGCCTCACGCAGCTAAGAAGCC
TGGGCATCACGGCAGTCCTTCCAAGCTACGGCGGGGACCTGTGGACTTCGATAGGGAAGATGACCGTCCTGACGAAACTG
GCGGTCGGAACTCGCGGCGAAAACGACGAAGTCCTCAGTTTGGACAAGTTCAAGCCGCTCAGAAACGTGGAGAAGTTTTA
CCTGACGGGCAAGCTGGAGAACGGGGTGCTCTTTCCGGTATCCGAGGGGTTTGACAAGCTCAAGGTCCTGACAAATGCGC
TGGTCCGGGCTGGCGCAGGACCCGCTCAAATCCTTGTCTGAAATGGGGAACTTAGTTTACCTCAACCTCTATTGTGCGTA
TGACGGGGAATCCCTGGCATTCTGTTCTGGATGGTTTCCCAAGCTCAAGCGGTTGTTCCTAGGAAAGCTGGACAATCTGA
GTTCAGTTGAGATAAGCGATGGCTCCATGACCAACTTGACATACCTAGAGCTTCGTGAGCTCTGGAGCCTGGAAGCCGTG
CCTGAAGGCCTCGGGTACCTTAGGTCGCTTCAGCACCTGTATGCGCGGAACATGCCGAGGGACTTCGCCGCGCAGCTGGA
AGGAGACCGCAAGGGATTTGTTCAGCATATTGCCAACATCGAATGCGTCTGACCGACGCACTTTCATCATCTGGTTCTCG
GTTTTCTGTAACAG-------AGGATGATTCGGACAGAAGAAATGTTTCAGTGCGAA-----CTAGTTTCAGATCTCCAG
TTTCAGCATGGTGTTGAGAGGTGACGCGCC--------------------AGACCATTTATTTCCTTTTGTTGTTGGCCA
TGTAATAAGAGGGATTGCTTAGATTT----TGCTGTGCTCGCGGTTGTCTTCAGTGTTTCTAACTATAAATAAATAAAAC
CCCTCAGATATATTAATTCCAG----------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TGTTTTTCTCATCTATATAT-TTCAGTCAAAACCAGAGTCAGAG
ATTTGCTTATGGATTGTAGGTTGTGTCATATGGATGCTGTAACAATCACTCCAGTGCTTTTGATCTGTGTATATCCGGGT
TTGCTGGTCGGCAAGAAGTGACTCGTTTATTCAGGATCGGGTGGGTTTCGGCCCCT-GCCATCCATTCAGTCCTCTTTTC
CATTATACTACTACTCGCAGAATTAAGCCCTTTCTCTGTAAATGCTTTG-CTTTTAACTGTAAACCGCACCCAGGCCAGG
CAGATGTGTTTGCAGATTCTGCTTAACTGCCATTCCGATAGGCCATATGATACGAGCAAATGAATCTGGTCATATTTCTT
TGGAGTATTTAACCAAAAACTACCACATTTCATGGAAACGTGTCCAGAAACTAC
>chr2B_1
ACGCCACCCTAGTGGCTCAGGGCCTCTTTGGCTCAAAAGTGGAG----GGAAAAAATATAGAAACAATAATTACTTCCTA
TGGTAGCACTATTTATACGTTTGGCTCAATGGAGCAAATAAAAAGGAGAGAATCCTTTGAACTCATTTCAAAAGAAAAAC
GCGGAAATTCTACCATCCACTTGAACTGATTTTTAAAAATTTCTATGCACGAAGAACGAGATTGGGACCCTTAGTGACA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TAATAGCATTCTAATTATACTTTTTACGTAGTTTGACTTTGATTTCACCATGTTTA
TTAGGATTTCTATGTTTTCTCTATTCTTGTGAATCAAACACTCAAGTTTACAAAGTTCATGTGTTTTCCGGTTATCTATT
TTGCACATGCATTCATATCATATTCCTATGTGTTTATATTTATGTGAACCAAACGGGTCCTAAGCAGCAAGGAGATTGGC
AATCACAGGACCTAGGGGACTGCGTTCGTGATGCCTCCCAATAATAGAATTATCACATTGTGTATGCTTTCCAATAATAG
CATTACCTCATAGCCACTGAACAAGGAAATAATCTGATGATGTAAAAGGGACGTCAATGGCTTTGAAAACAGTATCCTTT
TTTT--ATTAAGTATCTTATT----ATGAATTTGTGGTGTCTTACAAAGTGATTTTCCTCATTTCCTGCCAGTTATAAAA
TCACCGACGGGAGGGGTCAAGCAGCTGAAGTAGTGAAGTCAGGAATCATGGCAGAAGGTCTGATACTTGTCGTGCTTTCG
AAAATCGGAGCTACCTTTGGAGGAGTTGCACTGAATGCAATTAGGTTGAAATTGGGGAAGGAAGGCAACATTTTACTTGA
AACAGAAAACAGGATGAAACAAATTGAGATTGAATTTGAGATCATGCAGGCCTTCATAAGTCAAGTAGATCCATATAGTG
AAAATAACCAAATTCTCAAAGCATGGCTGAAGCACATAAGGAAGATTGCCTCTGAAGTTGAGGATATCATCGACGAATAT
TCATTTCTCCTTGGAAAAATGGACAATGCAGAAGGTCTTCTGAATAAGGCACTCCATCGATCAAGGAGGGTGAAGGCATG
GAAAGATATTTCTGCTCAGCTCAAACAAGTACAAGAAAGACTTCAAAATCTATCAACTGTGAAAGAAAGATACGGCATAA
CAGTAGCTGCTGGACTTGGGGGTGGATCTTCACGCCACAATGTTACTCGTAAGATGTACATGTCTGATTCTTCCTACTTA
AATGATAATGACAATGAAGAAATCATAGGAAATGAAGATGAAGCAAAAAAGTTGACACAATGCATAGATGATGATGGTTT
GGATCGTACAATTATCTCCGTCTGTGGAATGGGTGGTTCCGGCAAAACAACTCTTGTAAGCAGCATCTATAGGAAACAAA
AAATCAGAAAAAACTTCAATTGCTATGCTTGGATCACGGTATCACCAAATTATCCCGTTGAAGATCTTCTAAGTAAACTG
ATCAACCAACTTTGTATCCCTGATGAGCTAGCTGGTACAACTGATCCAACAGATTTGGTGGATAAAATCCACAGTTACCT
CGGGAACAAGAGATACCTTGTTGTCTTGGATGACATGTGGAATAGAGATTCTTGGTTATTCCTTGAACGAGCATTTGTCA
AGAATAAGTGCAGAAGTAGAGTCATCATTACTACTCGCACAGAAGCTGTTGCATCATTTGCAGAGGATAACCAGACTATC
AGAATTGGTCTTCTTCCACAGAGAGAATCATGGGACCTTTTCAGCAGAAAAGCATTCTCAAGGCAAAACAGGGCAACATC
GGGATGCCCTCAAGGTCTTGTTCCCTGGGCAGAAAAAATTCTGGAGAGATGCCAAGGCTTGCCCCTCGCTATAGTAGCTA
TAGGGAGTCTCCTATCTTACAGAGATATGGAGGAACATGAGTGGAAACTATTCTACAATCAACTGAATTGGCAACTAACA
AATAATCCAGAGCTGAACTGGGTTTCAAGTTTCCTGAAGCTAAGCTTGGATGATCTTCCAAGCCACTTGAGGAACTGTTT
CTTGTACTGTGGGTTATTCCCCGAAAATTACCCAATACGACGGAAATGGATAATCAGATTGTGGGTAGCTGAAGGTTTCG
TCGAGGATCGCGGAACAGAGACGACTCTGGAGGAAGTCGCCGAGGATTACCTCAAAGAACTTGCTCAGCGCTCACTGATT
CAAGTGACGGAAAGGAATGAGTACGGAAGGCCAAAAAGATTTCAGGTGCATGATCTTGTGAGAGAAATGACGCTGACCAT
ATCAAGAAAAGAGAGGTTCGCTCTTATCTGTAATAACCCAGACGTGACAGACGGCGGCGACGAAGCAAGCCGTGTATCAG
TGCATTGCGGAGGCCAGGTCTTTCAGCCAGGCCCAGCTTCACAACATCTGCGCTCGTTTTTGTTGTTCGACAGGCATGTG
CCGGTTCCATGGATCTGCGCTGCTTCATCGAATTTCAGGCTGCTAAGGGTGTTGTGCCTCAGATACTCCCTCCTCGAGCA
CATCCCAGATGCCATTACAACTGGTCTGTTCAATCTGCACTACCTTGATTTCTCGCGTACGAAAGTGAAGACGATACCAA
GATCAATAGCGAGGCTCAAGAAACTGCAGTCGTTGCACCTCCGGTTTGCTCGTGTGATGGAGCTGCCACGTGAAATAGCG
ATGCTCTCAAGCCTCCGGCACTTGTCTGTGAGCAACGATTTGTACGGCACATCAGTCACTGGTAGCATCTGCAAGCTCAA
GCACTTGCAAACTCTCCGAGAGGTGAAGGCCAACAAAGATTTGGTTCAGAATCTGGGGTGCCTGACGCAGCTAAGAAGCC
TGGGCATCACGGCAGTCCTTCCAGGCCATGGCGTGGACCTGTGGACTTCGATCGGAAAGATGACCGTCCTGACGAAACTG
GCAGTCGGAACTCGCGGCGAAAACGACGAAGTCCACAGTTTGGACAAGTTCAAGCCGCTCAGAAACCTGGAGAAGTTTTA
CCTGACGGGCAAGCTGGAGAAAGGGGTGCTTTTTCCGGAGTCCGAGGGGTTTGACAGGCTCAAGGTCCTGAC-AATGCGC
TGGTCCGGGCTGGCGCAGGACCCGCTCAAATCCTTGTCTGAAATGGGGAACCTAGTTTACCTCAACCTCTATTGTGCGTA
TGACGGGGAGTCCCTGGCGTTCTGTTCTGGATGGTTTCCCAAGCTAAAGCGGCTGTTCCTAGGGAAGCTGGACAATCTGA
GTTCAGTTGAGATAAGCGATGGCTCCATGACCAACTTGACATACCTAGAACTTCGTGAGCTCTGGAGACTGGAAGCCGTG
CCTGAAGGCCTCGGGTACCTTAGGTCGCTTCAGCACCTGTATGCGCGGAACATGCCGAGGGACTTCGCCGCGCAGCTGGA
AGGAGGCCGCAAGGGATCTGTTCAGCATATTGCCAACATCGAATGTGTCTGACCGACGCATTTTCATCATCT------CG
GTTTTCTGTAACAG-------AGGATGATTCGGACAGAAGAAATGTTTCGGTGCGAACAACGCTAGTTTCAGACCTCCAG
TTTCAGCATGGTGTTGAGAGGCGAAGCACTGGGACTGGAAATGCATGCAGAGACCATTTATTTCCTTTTGTTGTTGGCCA
TGCAATAAGAAGGATTGCTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTTTTCTCATCTATATATATTCAGTCAAAACCAGAGTCAGAG
ATTTGCTTATGGATTGTAGGCTGTGTCATATGGATGCTGTGACAATCACTCCGGTGCTTTTGATCCATGTATATCCAGT-
------------------------GTTTATTCAAGATCAGATGGGTTTCGGCCCCTA-CCATCCATTCATTCCTCTCTTC
CATTATTATATTACTCGCAGAATTAAGACCTTCCTCTGTAAATGCTTTGTTTTTTAACTGTAAACCGCATCCAGGCCAGG
CAGATGTATTTGCAGATTCTGCTTCACTGGCATTTGG--AGGCCATATGATACGAGCGCATGAATCTGGTCATATTTCTT
------------------------------------------------------
>chr2D_59
----------------------------------------------------------TAGCAATAATATTTTTTTCCTA
TGGTAGCACTATTTGTACGTTTGGCTCAATGGAGCAAATAAAAAGGAGAGAATCCTTTGAACTCATTTTAAAAGAAAAAC
GCGGAAATCCTACCATCCACTTGGATTGGTTTTTAAAATTTTCTATGCACGAAGAACGAGATTGGGATCCTTAGTGACA-
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------TAATAGCATTCTAATTATACTTTTTACGTAGTTTGACTTTGATTTGACCATGTTTA
TTAGGATTTCTATGTTTCCTCTATTCTTGTGAATCAAACACTCAAGTTTACAAAGTTCATGTGTTTTCCGATCATCTAGT
TTGCACATGCATTCGTATCATATTCCTATGTGTTTAGAATTATGCGAACCAAACAGGTCCTAAGCAGCAAGGAGATTGGC
AATCACATGACCTAGGGGACTGAGTTCGTGATGCCTCCCAATAATAGAATTATCTCATTGTGTATGCTTTCCAATAATAG
CATTACCTCATAGCTACTGAACAAGAAAATAATCTGATGATGTAAAAGGGACGTCAATGGCTTTGAAAACAGTATCCTCT
TTGTTGATTAAGTATCTCA------------TTGTGGTGTCTTACAAAGTGATTTTCCTCATTTCCTGGCAGTTATAAAA
TCACCGACGGGAGGGGTCAACCAGCTGAAGTAGTGAAGTCAGGAATCATGGCAGAAGGTCTGATACTTGTTGTGCTTTCG
AAAATCACAGCTACCTTTGGAGGAGTTGCACTGAATGCAATTAGGTTGAAATTGGGGAAGGAAGGCAACATTTTACTTGA
AACAGAAAACAGGATGAAACAAATTGAGATTGAATTTGAGATCATGCAGGCCTTCATAAGTCAAGTAGATCCATATAGTG
AAAATAACCAAATTCTCAAAGCATGGCTGAGGCACATAAGGAAGATTGCCTCTGAAGTTGAGGATATCATCGACGAATAT
TCATTTCTCCTTGGAAAAATGGACAATGCAGAAGGTCTTCTGAATAAGGCACTCCGTCGATCAAAGAGGGTGAAGGCATG
GAAATATATTTCTGCTCAGCTCAAACAAGTACAAGAAAGACTTCAAAATCTATCAACTGTGAAAGAAAGATACGGCATAA
CAGTAGCTGTTGGACTTGGGGGTGGATCTTCACGCCACAATGTTACTCGTAAGATGTACATGTCTGATTCTTCCTACTTA
AATGATAATGACAATGAAGAAATCATAGGAAATGAAGATGAAGCAAAAAAGTTGACACAATGCATAGATGATGATGGTTT
GGATCGTACAATTATCTCCATCTGTGGAATGTGTGGGTCCGGCAAAACAACTCTTTTAAGCAGCATCTATAGGAAACAAA
AAATCAGAAAGAACTTCGATTGCTATGCTTGGATCACGGTATCACCAAATTATCCCGTTGAAGATCTTCTAAGTAAACTG
ATCAACCAACTTTGTATCCCTGATGAGCACGCTGGTACAACTGATCCAACAGATTTGGTGGATAAAATCCACAGTTACCT
TGGGAACAAGAGATACCTTGTTGTCTTGGATGACATGTGGAATAGAGATTCTTGGTTATTCCTTGAACGAGCATTTGTCA
AGAATAAGTGCAGAAGTAGAGTCATCATTACTACTCGCACAGAAGCTGTTGCATCATTTGCAGAGGACAACCAGACTATC
AGAATTGGTCTTCTTCCACAAAGAGAATCATGGGACCTCTTCAGCAGAAAAGCATTCTCAAGGCAAAACAGGGCAACATC
GGGATGCCCTCAAGGTCTTGTTCCCTGGGCAGAAAAAATTCTGGAGAGATGCCAAGGCTTGCCCCTCGCTATAGTAGCTA
TAGGGAGTCTCCTATCTTACAGAGAAATGGAGGAACATGAGTGGAAACTATTCTACAATCAACTGAATTGGCAACTAACA
AATAATCCAGAGCTGAATCGGGTTTCAAGTTTCCTGAAGCTAAGCTTGGATGATCTTCCAAGCCACTTGAGGAACTGTTT
CTTGTACTGTGGGTTATTCCCGGAAAATTACCCAATACGACGGAAATGGATAATCAGAGTGTGGGTAGCTGAAGGTTTCA
TCGAGGATCGTGGAACAGAGACGACACTGGAGGAAGTCGCCGAGGATTACCTCAAAGAACTTGCTCAGCGCTCACTGATT
CAAGTGACGGAAAGGAATGAGTACGGAAGGCCAAAAAGATTTCAGGTGCATGATCTTGTGAGAGAAATGACGCTGACCAT
ATCAAGAAAAGAGAGGTTCGCTCTTATCTGGAATAACCCAGACGTGACAGACGGCGGCGACGAAGCAAGCCGTGTATCAG
TGCATTGTGGAGGCCAGGTCTTTCAGCCAGGCCCAGCTTCACAACATCTGCGCTCATTTTTGTTGTTCGACAGGAATGTG
CCGGTTCCATGGATCTGCGCCGCTTCATCGAATTTCAGGCTGCTAAGGGTGTTGTGCCTCAGATACTCCCTCCTCGAGCA
CATCCCGGAAGCCATCACAGCTGGTCTGTTCAATCTGCACTACCTTGATTTCTCGCGTACGAAAGTGAAGACGATACCAA
GATCAATAGCGAGGCTCAAGAAACTGCAGTCGTTGCACCTCAGGTTTGCTCGTGTGATGGAGCTGCCACGTGAAATAGCG
ATGCTCTCAAGCCTCCGGCACTTGTCTGTGAGCAACGATCTGTATGGCACATCAGTCACTGGTAGCATCTGCATGCTCAA
GCACTTGCAAACTCTCCGAGAGGTGAAGGCCAACAAAGATTTGGTTCAGAATCTGGGGTGCCTCACGCAGCTAAGAAGCC
TGGGCATCACGGCAGTCCTTCCAAGCTACGGCGGGGACCTGTGGACTTCGATAGGGAAGATGACCGTCCTGACTAAACTG
GCGGTCGGAACTCGCGGCGAAAACGACGAAGTCCTCAGTTTGGACAAGTTCAAGCCGCTCAGAAACCTGGAGAAGTTTTA
CCTGACGGGCAAGCTGGAGAACGGGGTGCTCTTTCCGGTATCCGAGGGGTTTGACAAGCTCAAGGTCCTGAC-AATGCGC
TGGTCCGGGCTGGCGCAGGACCCGCTCAAATCCTTGTCTGAAATGGGGAACCTAGTTTACCTCAACCTCTATTGTGCGTA
TGACGGGGAGTCCCTGGCGTTCTGTTCTGGATGGTTTCCCAAGCTCAAGCGGCTGTTCCTAGGGAAGCTGGACAATCTGA
GTTCAGTTGAGATAAGCGATGGCTCCATGACCAACTTGACATACCTAGAGCTTCGTGAGCTTTGGAGCCTGGAAGCCGTG
CCTGAAGGCCTCGGGTACCTCAGGTCGCTTCAGCACCTGTATGCGCGGAACATGCCGAGGGACTTCGCCGCGCAGCTGGA
AGGAGACCGCAAGGGATTTGTTCAGCATATTGCCAACATCGAATGTGTCTGACCGACGCACTTTCGTCATCT------CT
GTTTTCTGTAACAGTTAACACAGGATGATTCGGACAGAAGAAATGTTTCGGTGCGAACTGCGCTAGTTTCAGACCTCCAG
TTTCAGCAAGGTGTTGATAGGCGAGGCACTGGGA----------ATGCAGAGACCATTTATTTCCTTTTGTTGTTGGCCA
TGCAATAAGAGGGATTGCTTAGAGAGATAGTGCTGCGTTCGCGGTTGTCTTCAGTGTTTCTAATC---AAAAATAATAAT
CCGTCAGAGATATTAATTCCAG----------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------CGTTTTTCTCAGCTATATAT-TTCAGTCAAAACC--AGTCAGAG
ATTTGCTTATGGATTGTAGGCTGTGTCATATT-ATGCTGTAACAATCACTCCAGTGCTTTTGATCTATGTATATCC-GGG
TTGCTGGTCGGCAAGAAGC-ACTCGTTTATTCAATATCAGATGGGTTTCGGCCCCAGGCCATCCATTCAGTCCTCTCTTC
CATTATAC---TACTTGCAGAATTAAGCCCTTTCTCTGTAAATGCTTTG-TTTTTAACTGTAAACCGCATCCAGGCCAGG
CTGATGTATTTGCAGATTCTGCTTCAGTAGCATTTGG--AGGCCATATGATACGGGCGAATGAATCTGGTCATACTTCTT
------------------------------------------------------
>SNPs
-------------------------------------SSS-S--SSSS--------------------------------
---S----------------------------------------------------------------------------
--S---------------S-------------S----------------------------------------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS------------------------S-S------------------------S----
------------------------------------------S-------------------------------------
----S--------------------------------------------------S-----------------S------
-------------------------S------------------------------------------------------
---------SS-----S--------------------------------------S-------------S----------
---------------------SSSS--------------------------------------------------SS---
---------------------------------------------S---------------S------------------
--------------------------------------------------------------------------------
-----------S-------------------------------------------------------S------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
-S-------------------------------------------------S--------------S-------------
---------S----------------------------------------------------------S-----------
--------------------------------------------------------------------------------
-----S-------S---S---------------------------------S-------------------S--------
-------------------S------------------------------------------------------------
----------------------------------------S-----------S---------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
----------------------------------------------S-----------------S--S------------
--------------------------------S-----------------------------------------------
--------------------------------S-----------------------------------------------
-S-----------------------S------------------------------------------------------
--------------S-----S--------------------------------S-------------------S------
---------------------------------------------------------S----------------------
-----S------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
------------------------------------------------------S-----------------S-------
-------------------------------S------------------------------------------------
-----------------------S-----------------------------------------------S--------
---------S--------S-----------------------------S-------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
------------------------------------------------------------------------S-------
---------------------------------------------------S----------------------------
---------S--------S---------------------------------S----------S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S--------------------------SSSSSS--
-------------------------------------------------S-----------------------S------
---------------------S--S--S-S--------------------------------------------------
--S--------------------SSS---------S-S-------------------------SSSSS--S--SS-S--S
--S-----S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------S---------------------------------------------S---------S--S
------------------SS-------------S----S-S-----------------------------------S---
----------S---------------------------------------S------------------S----------
-------S----------------S----S----SS-SS------------------S----------------------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_48
----------------------------TGGCTCAAACAAGAAGCGGA--------------------------------
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------------------------------------------------------
>reverse_1778
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TCCTGATGAGCAAGCTGGTAC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_1474
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------CTTGGGGGTGGATCTTCACA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_2618
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TGACGAAGCAAGCCGTGTAT---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_2402
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TGGGTAGCTGAAGGTTTCG
TT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_3862
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TGACGCGCCAGACCATTTAT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
