>input_sequence_33439
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-----------------------------------------------------ATGGCGGCCGCTGCGGGGTCGTACGGC
AAGCTCCACAAGTCATTCAAGCTTGCCGCTCGCTCCATACTCACCGCCTTCTCCCGCGAGGTTGGTTCCCTCCC------
----------------GC---CTAGTGAAAAAGCTTCAGGCCCACGCCGTGAGTCAGATCAGTTCCTCTT-ATGTGCTCT
TGGGATGAATTAACTCGTGTGTTATTCTTGCATCTTAGGATCTTAACAATGCTTTCCCATCATTCACTGATGCTGAAAGG
GAGCGCCTGTACCAAATGTTCATCTATGTGAGTGTTCCAATCTTTCCTCAGTCCACAGTTACTGCTAAATCTCACAATGT
TTGCCCTACGTGCAACTCAATATGCCATTAAAAGTTTGGATTGTGTATCTGTGTCTGAATGTAGCTCTTAACTTCTGATC
TGTTTTCC-TTTTTATTTTATTTCAGGTGATCAAGTCTTTGCATGGCAACATTGTGGTACAGTTATTGCGCCCAAGCTGG
TTTCTACTTTCCAGTATGATGCAAATATCTAAGGCTGCACTGAATACTTAATTTTCAGCAGAGTTTAACTGGCTGATCAA
CTCCTGCATATGTTGAAAAAAACATACATTACGTGCATTTCTAGATATGTGTGGTGCTAACTGGCTGGTGACACAATCTT
ATCTTCAGAAACAGAAATACCCAGCACCTTGTCTTGTCC-TTTTTTCATGGAATTGTATTACTTGTAAACTGTGCAATTA
CTCACAAAAGTGTCATTTCACTTTACTATGCG-------CCTTGGGGTATGGCAAGACATACTCAATGTCTAGGCTATCA
AACACCATTTCAATGGTTAAAAAGAAGGCGATGAGCTAATAACTATATAGTGCAGGATTAATTCATAATTAGTAGTGCCA
ATTTTGCTAGTATCTGCTCTCCTTTGATCCCTTTACATGTGCCTAACCACAATATT-TTGAGCGGACTGGGCGCTTAATT
TGTTTACTTTTGCATATGCAGCTGAACTACGAAGCTGATATATCTTATGTTATGTTTGCTGAACCTGATGATGTTTTATT
TATTTCTTGCATGTGCCAGCACTGTATTAATGCCATTGTATTGAAGTGATTCCTCTTGTTCATGCTGCAGGAGGAGTTCC
GAAATGTGTGCGACGAAATAGAAGTAATTTCTTGACCAATACTTCCTGACGATGCTGATAGATTTTGAGCACACCTTTGG
GCTCAACATAATCAGCGTCAAGTTTATTAACACCCGCGACAAATGCTGTGATTTGTAGCAGCATTTTTAAATGTTTAATG
ACATGACTATCAATTGTTTTAGATTGCTACTGCCCTTGACAAGGTAGATCAGTTTGTTGAAGAACAAACTCTGGATGTTT
TATCTTCAGACAAGTATGAACTTTTTCCTTTGGCTTTGAGATTCTGTTGTGGAATTTCTGGGTTCTAAATAGTGTTTA--
ATCTTCTAAGAAATTTGATCATACGGTATGGATAGGCTGGGTAGGATTTGCAATTGCAGTGGAGGTTCTCTTGTGCATGC
TACTCATTACC-AAACCTATATAAATGCATGAATATGTTCTTTCTGGAAATCCAGCACAGCTTTCCTTGAATTATCCTTT
GTCCAGGGTTAACCAAATACAGTTCACTTGGAATGAAAGCTCATTCAATTATGAGCCTATATAAATGCATAATGATGTTC
TTTCTGGAAATTCAGCACATCTTTTCTTGAATTGTTGCTGTTTGTTAAAAGTCACAGAATATAGTTTATTTGAGATGACA
GCTCATTCGTTTACAGGACTAGCATTGAAGACATCAAAGAAAGGATATCAAAGGAGAAGAAGGATGAAATTGAACGTTTA
AAAGGTTTACTAGAGAAGGTATTATCCATCTGAAAAGCAGATTTGCAACCTTTAAGTTTATCATTGAAATGGTCCTTCAG
CACTCCATGCCCTGTGGTTGAGTTTTGAATTT--GTCTTTTTTAAGTTTTGACTAAATAGCAGTTGAGTTCTTATCACTC
CATTGCTGTCAACATGATATTTAGTTGCAACATGTTACCCTCCCCACCACAAAAAAACAA----------AAAC-AAAAT
TTATGGTGCTGTTACTGCTGTAAGTGTTACATGATGGTCACCTTAAGAAGCGCCGACAACGCAATTTATCTTCGTCTCAA
ACTAATATTGATTAGCTTTCTGCTCACACCATAAC-GCAGACTCAAGAAAGGAACAATGCCATGAAGGCCCGAATCGAAC
CCTTGAAGCAAGGGGAGGATTTCAATGACACAAGAGATGTTCTCACGAAGGTCTTACTTTAGGTCTATGTTTCTGTCGTG
CTTTCTTCTTATTACCCTTCCTGTTTTGATTCGATTTCTTGGGACTTGTTTTGCAGCTGAAGCAATGGAATTCTGCGTGT
CAGAGCTACGATGACCATTGA-----------------------------------------------------------
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--------------------
>chr5A_1_TraesCS5A01G372300
TATTTTTATTTTTTCTATATAACGACGTTTGTAAGGTTGCGTGAAGCTTAATGTATGGTCTTAGCCCTTTTTCGCAATAA
GAATTAAAATAAAAAAGATTATTCTTTAAAAGTTGTCAACTCCAACCCAGTTCAAATGCTTCAATTCGACATCGCATTTT
CAGGTTGTCCACTTTCTCCTGGCCACCGCTTCGTCCCCGCCGCCAACAGCCCGCGCCGGCCGGATCTGCCGCCTCCGCGC
CTCTCCTCTCAGCTGCTCCACGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCCTCGATCTGAGAAAAAA
ATGGCCAAGGGGCGAACTTGCGAGAGACGGAGCGACTGCACGCTG----------GCGGGCAGAACCGCCTACCATCCCC
ATCCCTAAACCCTAGCAATTATCCCCTCTTATTGCAGGCAACCGACGGCATCTAGGCAGAGCCGCCCACCATTCCACCGG
AATCGGAAAACCTAGTCG---CGGCGCCTCGATCTCGCCTGAACTTACCGTCGATGGCGGCCGCTGCGGGGTCGTACGGC
AAGCTCCACAAGTCATTCAAGCTTGCCGCTCGCTCCATACTCACCGCCTTCTCCCGCGAGGTTGGTTCCCTCCC------
----------------GC---CTAGTGAAAAAGCTTCAGGCCCACGCCGTGAGTCAGATCAGTTCCTCTT-ATGTGCTCT
TGGGATGAATTAACTCGTGTGTTATTCTTGCATCTTAGGATCTTAACAATGCTTTCCCATCATTCACTGATGCTGAAAGG
GAGCGCCTGTACCAAATGTTCATCTATGTGAGTGTTCCAATCTTTCCTCAGTCCACAGTTACTGCTAAATCTCACAATGT
TTGCCCTACGTGCAACTCAATATGCCATTAAAAGTTTGGATTGTGTATCTGTGTCTGAATGTAGCTCTTAACTTCTGATC
TGTTTTCC-TTTTTATTTTATTTCAGGTGATCAAGTCTTTGCATGGCAACATTGTGGTACAGTTATTGCGCCCAAGCTGG
TTTCTACTTTCCAGTATGATGCAAATATCTAAGGCTGCACTGAATACTTAATTTTCAGCAGAGTTTAACTGGCTGATCAA
CTCCTGCATATGTTGAAAAAAACATACATTACGTGCATTTCTAGATATGTGTGGTGCTAACTGGCTGGTGACACAATCTT
ATCTTCAGAAACAGAAATACCCAGCACCTTGTCTTGTCC-TTTTTTCATGGAATTGTATTACTTGTAAACTGTGCAATTA
CTCACAAAAGTGTCATTTCACTTTACTATGCG-------CCTTGGGGTATGGCAAGACATACTCAATGTCTAGGCTATCA
AACACCATTTCAATGGTTAAAAAGAAGGCGATGAGCTAATAACTATATAGTGCAGGATTAATTCATAATTAGTAGTGCCA
ATTTTGCTAGTATCTGCTCTCCTTTGATCCCTTTACATGTGCCTAACCACAATATT-TTGAGCGGACTGGGCGCTTAATT
TGTTTACTTTTGCATATGCAGCTGAACTACGAAGCTGATATATCTTATGTTATGTTTGCTGAACCTGATGATGTTTTATT
TATTTCTTGCATGTGCCAGCACTGTATTAATGCCATTGTATTGAAGTGATTCCTCTTGTTCATGCTGCAGGAGGAGTTCC
GAAATGTGTGCGACGAAATAGAAGTAATTTCTTGACCAATACTTCCTGACGATGCTGATAGATTTTGAGCACACCTTTGG
GCTCAACATAATCAGCGTCAAGTTTATTAACACCCGCGACAAATGCTGTGATTTGTAGCAGCATTTTTAAATGTTTAATG
ACATGACTATCAATTGTTTTAGATTGCTACTGCCCTTGACAAGGTAGATCAGTTTGTTGAAGAACAAACTCTGGATGTTT
TATCTTCAGACAAGTATGAACTTTTTCCTTTGGCTTTGAGATTCTGTTGTGGAATTTCTGGGTTCTAAATAGTGTTTA--
ATCTTCTAAGAAATTTGATCATACGGTATGGATAGGCTGGGTAGGATTTGCAATTGCAGTGGAGGTTCTCTTGTGCATGC
TACTCATTACC-AAACCTATATAAATGCATGAATATGTTCTTTCTGGAAATCCAGCACAGCTTTCCTTGAATTATCCTTT
GTCCAGGGTTAACCAAATACAGTTCACTTGGAATGAAAGCTCATTCAATTATGAGCCTATATAAATGCATAATGATGTTC
TTTCTGGAAATTCAGCACATCTTTTCTTGAATTGTTGCTGTTTGTTAAAAGTCACAGAATATAGTTTATTTGAGATGACA
GCTCATTCGTTTACAGGACTAGCATTGAAGACATCAAAGAAAGGATATCAAAGGAGAAGAAGGATGAAATTGAACGTTTA
AAAGGTTTACTAGAGAAGGTATTATCCATCTGAAAAGCAGATTTGCAACCTTTAAGTTTATCATTGAAATGGTCCTTCAG
CACTCCATGCCCTGTGGTTGAGTTTTGAATTT--GTCTTTTTTAAGTTTTGACTAAATAGCAGTTGAGTTCTTATCACTC
CATTGCTGTCAACATGATATTTAGTTGCAACATGTTACCCTCCCCACCACAAAAAAACAA----------AAAC-AAAAT
TTATGGTGCTGTTACTGCTGTAAGTGTTACATGATGGTCACCTTAAGAAGCGCCGACAACGCAATTTATCTTCGTCTCAA
ACTAATATTGATTAGCTTTCTGCTCACACCATAAC-GCAGACTCAAGAAAGGAACAATGCCATGAAGGCCCGAATCGAAC
CCTTGAAGCAAGGGGAGGATTTCAATGACACAAGAGATGTTCTCACGAAGGTCTTACTTTAGGTCTATGTTTCTGTCGTG
CTTTCTTCTTATTACCCTTCCTGTTTTGATTCGATTTCTTGGGACTTGTTTTGCAGCTGAAGCAATGGAATTCTGCGTGT
CAGAGCTACGATGACCATTGAGCTTCTCTGGTGGAA--------TCAAGAGACATCTGCTGTGTAGCTTTGTGTGGTTGT
AGAGTGGAGGTCGAGTCAGGAGTCATGCTCCCCCATGAACCAATGGTGCTAACCAATTGTAGCGTGATTCTGTTTCTGAG
TTGCAAGACGTAGCTGTTGCGTTTCTGTATTTTTG-TGGCTCCTGTTTCCTGCACCCATAATTGATGCTTGCTTTAGTGA
TCATCCAGATGACACTCCTGGTTCCATTTTCTCCCTTGACATTTGTTTTTCAC-TTTGGTGT-CCAAGTCTTAATGAGAA
AATCCCAAGAAAAAAAA-TGCATGTATTCCCCAAATTACTGCAGTTATATACTCCCTCTGTAAAAAAATATAAGAGCGTT
TAGATCACTAAAATAGTGATCTAAACACTTATATTTCTTTACTGAGGGAGTAGAAGGAAATCTGTCAAAAAGGAAATAAT
GAACACATTTTGATTCTGAAGTTGAAATCTCAGAGGGG-TTGCTGTAACAC-CCATAGCATAGCCGTTTTACCTCTTCTT
CTTCTTCTTCATTTTTTTTTCTTGTAAATTTCCACCCTAATATGGTGCCAGT------TGTTGCCTCCTTTTCTTAGGGA
AAAATTTCTGATCTGAATCATGGCATAGGTTTAGCTGCTCCTG--ATATGCTACTAGCATGTAGTGTAAAAAAACATACA
AGGAACAGCTCCCTCGTATGCTGAATGATAAACTGAATTGAACTTACAGAAGGATTGCAGCTAGGGAC-GGGATTAAAAT
TGGTTGGTTTGGGATGTAATCATGGTGGGGTGTGGAGTCTGAAGGGAATGCAGCAA-----GTGACCAAGTGCTCTACAC
-AAGCAGCTTCTTTGGAGATGAAACTCTGGCCGGCAGAGAAGCTGGGGTTCACCAAGACAACCATCCAGGCAAATCCAGA
CTCTGTTTACTTTGTATAGTAAG----------CAGGCGTTCTCCTCGCCTTTTGCGTGCATAGTTAGTTTGTTCAGAGA
TCAGTCTCAAGTCTGAATTT
>chr5B_780
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-----------------------------------------------------------CTCCCTCGATCTGATAAAAAA
-TGGCCAAGGGGCGAACTTGCGCGAGACGGAGCGGCTGCGTGCCATCCCCATTTTGCGGGCAGAACCGCCTACCATCCCC
GCCCCTAAACCCTATCAATTATCCCCTCTTATTGCAGGCAGCAACCGGAATCTAGGCGGACCCGCCCGCCATTCCACCGG
AATTGGAAAACCTAGTAGTCCCGGCGCCTCAACCTCGCCTGAACTCACCGTCGATGGCAGCCGCCGCGGGGTCGTACGGC
AAGCTCGACAAGTCATTCAAGCTTGCCGCTCGCTCCGTACTCACGGCCTTCTCCCGCGAGGTTGGTTCCCTTCCAACCCT
CAACGACGCCGGGGCGCTTGACTAGTGAAAAAGCTTCGGGCCCTCGCCTTGAGTGGGGTCCGTTCGTCTT-GTGTGCTCA
TGAGATGAATTGACTCGTG--TTATTCTTGCATCTTAGGATCTTAACAATGCTTTCCCATCGTTCACGGACGCCGAAAGG
GAGCACCTGTACCAAATGTTCATCTATGTGAGTGTTCTTATCTTTCCCCGGTTCACAGTTACTGCTAAATCTCTCAATCT
TTGCCCTACGTGCAAGTCC-TACGCCGTTAAAAGTTTGGATTGTCTATCTGTATCTGAACTGAATACTTAACTTCTGATC
TGTTTTCCTTTTTTATTTTATTTCAGGCGATCAAGTCTTTGCATGGCAACATAGTGGTACAGTTCTTGCG--CAAGCTGG
TTTCTACTTTCTAGTGTGATGCAAATATTTAAGGCTGCACTGAACACTTAATTTTGAGCAGAGTTTAACTGGCTGATCAA
CTCGTGCATATGTTGAAAAAAACATACATTGCGTACATTTCTAGATATGTGTGGTGCTAACTGGATGATGACACAATCTT
ATCTTCAGAAACAGAAATACCCAGCACCTTGTCTTGTCCTTTTTTTCGTGGAATTGTATTACTTGTAAACTGTGCAATTA
CTCACAAAAGTGTCATTTCGCTTTACTACGCG-------CCTTGGGGCATAGCAAGACATACTCAATGTCTAGTCTATCA
AACACCATTTCAATGGTTAAAAAGAAGGTGACGAGCTAATAACTGTATAGTGCAGGATTAATTCATAATTAGTAGTGCCA
ATTTTGCTAGTATCTGCTCTCCTTTGATCCCTTTCCATGTGCCTAACCACGATATTCTTGAGCGGACTGGGCGCATAATT
TGTTTACTTTTGCATATGCGGCTGAACCACGAAGCTGATATATCTTATGTTATATTTGCTGAATCTGATGATGTTTTATT
TATTTCTTGCATGCGCCAGCACTGTATTAGTGCCACTGTATTGAAGTGATACCTCTTTTTCATGCTGCAGGAGGAGTTCC
GAAATTTCTGCGACGAAATAGAAGTAATTTCTTGAGCAACACTTCCTCACGATGCTGATAGATTTTGAGCGCACTTTTGG
GCTCAACATAATCAGCTTCAAGTTTATTAACACCCGCGACAAATGTTGTGATTTGTAGCAGCATTTTTAAATGTTTAATG
ACATGACTATCAATTGTTTTAGATTGCTACTGCCCTTGACAAGGTAGATCAGTTTGTCGAAGAACAAACTCTGGACGTAT
TATCTTCAGACAAGTATGAACTTTTTCCTTTGCCTTTGAGATTCTGTTGTGGAATTTCTGGGTTCTAAATAGTGTTTATA
CTCTTTTAAGAAATAGGACCACACGGTACAGATAGGCTGCTTAGGATTTGCAATTGCAGTAGAGGTTCTCTTTTGCATGC
TACTCATTACCCAAACCTATATAAATGCATGAATATGTTCTTTCTGGAAATCTAGCACAATTTTTCTTGT-TTTTCCTTT
CTCCAGAGTTAACCACATACAGTTCACTTGGGATGAAAGCTGATTCAATTATGAACCTATATAAATGCATCAT-ATGTTC
TTTCTTGAAGTTCAGCAAACCTTTTCTTGAATTATTGCTGTTGGTTAAAAGTTACTCAATATAGTTTACTTGGGATGACA
GCTCATTCATTTGCAGGACTAGCATTGAAGACATGAAAGAAAGGATATCAAAGGAGAAGAAGGATGAAATTGAACTTTTA
AAAGGTTTACTAGAGAAGGTATTATCCATCTAAAAAACACTTTTGCAACC-TTAAGTTTATTATCGAAATGGGCCTTCAG
CACTCCATGCCCTGTGGTTGAGTTTTGAATTATAGTCTTCTTTAAGTTTTGACTAAGTAGCAGTTGAGTTCTTATTACTC
CATTGCTGCCAACACGGTATTTAGTTGCAAAGAGTTGCTCTCCCCACCACAAAAAGAAAACAAAACAAAAAAAC-AAAAT
TTGTGGTGCTGTTAATGCTGCAAGTGTTACATGATGTTCACCTTAAGAAGCGCAGACAACGCAATTTATCTTCATCTCAA
ACTAATACTGACTAGCTTTCTGCTCACACCAATACTGCAGACTCAAGAAAGGAACAATGCCATGAAGGCCCGAATCGAAC
CCTTAAAGCAAGGGGGGGATTTTAATGACACAAGAGATGTTCTCGCGAAGGTCTTACTTTAGGTCTATGTTTCTGTCGTG
CTTTCTTCTTATTACCCTTCCCATTTTCATTCGATTTCCTGGGACTTGTTTTGCAGCTGAAGGAATGGAATACTGCATGT
CAGAGCTGCAATGACCATTGAGCTTCTCTGGTTACTTGATGTAGTCAAGAGACATCTGCTGTGTAGCTTTGTGTGGTTGT
AGAGTAGAAGTTGAGTCAGGAGTCATGCTCCCCCATGAACCAATGGTGCTAACCAACTGTAGCGTGATTTTGTTTCTGAG
TTGCAAGACGTAGCTGTTGTGTTTTTGTGTTTTCGTTGGCTCCTGTTTCCTGCACCCATAGTTGATGCTTTGCTTTAGTG
---------------TCCTGGTTCCATGTTCTCCCTTGACAGTTGTTTTTCAG-TTTGGTGTCCCAATTCTTCATGAAAA
ATGCCCAAGAAAAAAAA-TGCATGTGTTCCCAAAATTACTGTGCCTATTTATA---------------------------
------------------------------------------------------AGG-----------------------
------ATTTTGAATCTGAAGTTGAAACAAATATCAAGATTGCTGCAGCACTCCATAGCATAGCCATTTTACCTC-----
-----------TTTTTTTTTTTTGTAAATTTCCACCCTAATATGGTGCCAATACTGAATGTTGCCTCCT-----------
--------------------------------------------------------------------------------
-----------------ATGCTGAATGATAAACTGAATTGAACTTACCGAAGGATTGCTGTTAGCAACTGGGATTGAAAT
TGGTTGGTTTGGGATCTAATCATGGTGGGGTGTTGAGCCTGGAGGGAATGCAGCGAGCAAGGTGACCAAGTGCTCTCCAG
-AAGCAGCTTCTTTGGAGACG-AACTCTCGCCGGCAGACAAGCTGGGGTTCACCAAGGCAGCCATCCAGGCAAAACCAGA
CTCTGTTCTCAGTCCCAAAATAAGTGTCGTTGACAGGTGTTCTCCTCGCCTTTTGTGTGCATAGTTAGTTTGCTCAGAGA
TCAGTCTCAAGTCTGAATTT
>chr5D_836
CTGCGT--------------------------------------------------------------------------
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-----------------------------------------GCTG----------GCGGGCAGAGCCGCCTACCATCCCC
ATCCCTAAACCCTAGCCATTATCCCCTCTTATTGCAGGCAACAGACGGCATCTAGGCAGAACCTCCCACCATTCCACCGG
AATCGGAGAACCTAGTCG---CGGCGCCTCAACCTCGCCTGAACTCACCGTCGATGGCGGCCGCTGCGGGGTCGTACGGC
AAGCTCGACAAGTCATTCAAGCTTGCCGCTCGCTCCATACTCACCGCCTTCTCCCGCGAGGTTGGTTCCCTTCCCACCCT
CAATGACGCCGGGCGTGC---CTAGTGAAAAAGCTTCGGGCCCTCGCCGTGAGTGGGATCCGTTCGGCTTAATGTGCCCT
TGAGATGAATTGACCCGTGTGTTATTCTTGCATCTTAGGATCTTAACAATGCTTTCCCATCGTTCACGGACGCCGAAAGG
GAGCGCCTGTACCAAATGTTCATCTATGTGAGTGCTCCAATCTTCCCCCAGTTCACAATTATTGCTAAATCTGTCAATCT
TTGCCCTACGTGCAAGTCC-TACGCCGTTAAAAGTTTCGATTGTGTATCTGTATCTGAACTGAACACTTAACTTCTGATC
TGCTTTCC-TTTTTATTTTATTTCAGGTGATCAAGTCTTTGCATGGCAATATAGTGGTACAGTTATCGCGCCCAAGCTGG
TTTCTACTTTCTAGTATGATGCAAATATTTAAGGCTACACTGAACACTTAATTTTCAGCAGAGTTTAACTGTCTCATCAA
GTCCTGCATATGTTGAAAAAAACATACATTACGTGCATTTCTAGATATGTGTGGTGCTAACTGACTGGTGACACAATCTT
ATCTTCAGAAACAGAAATACCCAGCACCTTGTCTTGTCC-TTTTTTCATGGAATTGTATTACCTGTAAACTGTGCAATTA
CTCACAAAAGTGTCATTTCACTTTACTATGCGGTATGCGCCTTGGGGTTTGGCAAGACATACTCAATGTCTAGGCTATCA
AACACCATCTCAATGGTTAAAAAGAAGGTGATGAGCTAATTACTGTATAGTGCAGGATTAATTCATAATTAGTAGTGCCA
ATTTTGCTAGTATCTGCTCTCCTTTGATCCCTTTCCATGTGCCTAACCACGATATT-TTGAGAGGACTGGGCGCATAATT
TGTTTACTTTTGCATATGCGGCTGAACTACGAAGCTGATATATCTTATGTTATGTTTGCTGAACCTGATGATGTTTTATT
TATTTCTTGTATGCGCCAGCACTGTATTAATGCCATTGTATTGAAGTGATACCTCTTGTTCATGCTGCAGGAGGAGTTCC
GAAATCTCTGCGATGAAATAGAAGTAATTTCTTGAGCAACACT-------------GATAGATTTTGAGCACACTTTTGG
GCTCAACATAATCAGCTTCAAGTTTATTAACACCCGCGACAAATGTTGTGATTTGTAGCAGCATTTTTAAATGTTTAATG
ACATGACTATCAATTGTTTTAGATTGCTACTGCCCTTGACAAGGTAGATCAGTTTGCCGAAGAACAAACTCTGGACGTAT
TATCTTCAGACAAGTATGAAC-TTTTCCTTTGCCTTTGAGATTCTGTTGTAGAATTTCTGGGTTCTAAATAGTGTTTA--
CTCTTTTAAGAAACAGGACCACACGGTACAGATAGGCTGCTTAGGATTTGCAATTGCAGTAGAGGTTCTCTTTTGCATGC
TACTCATTACCCAAACCTATATAAATGCATGAATATGTTCTTTCTGGAAATCTAGCACATTTTTCCTTGT-TTTTCCTTT
CTCCAGAGTTAACCACATACAGTTCACTTGGGATGAAAGCTGATTCAATTATGAACCTATATAAATGCATCAT-ATGTTC
TTTCTTGAAGTTCAGCAAACCTTTTCTTGAATTATTGCTGTTTGTTAAAAGTTACACAATATAGTTTACTTGGGATGACA
GCTCATTCATTTGCAGGACTAGCATTGAAGACATCAAAGAAAGGATATCAAAGGAGAAGAAGGATGAAATTGAACTTTTA
AAAGGTTTACTAGAGAAGGTATTATCCATCTAAAAA-CACTTTTGCAACC-TTAAGTTTATTATCGAAATGGGCCTTCAG
TACTCCATGCCCTGTGGTTGAGTTTTGAATTATAGTCTTCTTTAAGTTTTGACTAAGTAGCAGTTGAGTTCTTATCACTC
CATTGCTGTCAACACGGTATTTAGTTGCAAAGAGTTGCTCTCTCCACCACAAAAAGAAAACAAAACAAAAAAAAAAAAAT
TTGTGGCGCTGTTAATGCTGCAAGTGTTACATGATTTTCACCTTAAGAAGCGCAGACAACGCAATTTATCTTCATCTCAA
ACTAATACTGACTAGCTTTCTGCTCACACCAATACTGCAGACTCAAGAAAGGAACAATGCCATGAAGGCCCGAATCGAAC
CCTTGAAGCAAGGGGAGGATTTCAATGACACAAGAGATGTTCTCACGAAGGTCTTACTTCAGGTCTATGTTTCTGTCGTG
CTTTCTTCTTATTACCCTTCCTATTTTCATTCGATTTCCTGGGACTTGTTTTGCAGCTGAAGGAATGGAATTCTGCATGT
CAGAGCTGCAATGACCATTGAGCTTCTCTGGTTACTCGATGTAGTCAAGAGACATCTGCTGTGTAGCTTTGTGTGTTCGT
AGAGTGGAGGTCGAGTCAGGGGTCATGCTCCCCCATGAACCAATGGTGCTAACCAATTGTAGCGTGATTTCGTTTCTTCG
TTGCAAGGCATAGCTGTTGCGTTTCTGTATTTTCGTCGCCTCATGTTTCCTGCACCCATAGTTGATGCTTGCTTTAGTGA
TCATCCAGATGACACTCCTGGTTTCATGTTCTCCCTTGACATTTTTTTTTCTGGTTTGCTGT-CCAAGTCTTCATGAGAA
AAGCCCAAGAAAAAAACGTGCATCCGTTCCCCAAATTACTGCATTTATATACG---------------------------
------------------------------------------------------AGGAAATCTGGCAAAAAGGAAATAAA
GAACACATTTTGAATCTGAAGGTTAAATCTCAGGGGGG-TTGCTGCAACACTTTATAGCATAGCCATTTTACCTC-----
-----------TTC--TTTTTTTGTAATTTTCCAACCTAATATGGTGCCAATACTGAATGTTGCATCCTTTTCTTCGAGA
AAAATATCTGATCTGAATCATGACATAGGTTTAGTTGCTTCTGTGATGTACTACTAGTATGTAATAT-AAAAAACATTCA
AAGAACAGCTGCTTCGCATGCTGAATGATAAACTGAATTGAACTTACCGAAGGATTGCAGTTAGCAGCTGCGATTAAAAT
TGGTTGGTTTGGGATCTAATCATGGTGGGGGGTGGAGTCTGGAGGGAATGCAGCAAGTCAGGTGACCAAGTGCTCTACAC
AAAGCAGCTTCTTTGGAGGTG-AACTCTCGCCGGCAGACAAGCTGGGGTTCACCAAGACGGTCATCCAGGCAAAGCCAGA
CTCTGTTTACTCTGCAGTAAGCA---------------------------------------------------------
--------------------
>SNPs
SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S------
S---------------------S-----------S----SS---------------------------------------
------------------------------------------S-----------------S-------------------
------------------------------S-S------------S----------------------------------
------S----------------------------------------------------------------S--------
-------------------------------------S-----S----------SS----S----S--------------
--S--------S-------------------------------------------------S-----S--S--S------
-----------------------------------------------S----S--------------------S----S-
---------------S--SS--S---S-------------------------S------SSS-S-S--------------
----------------------------------------------------S---------------------------
-----------S----------------S---------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------S-----------------------------------
----------------------------------S---------------S-----------------------S-----
-------------------S------------------------------------------------------------
-------------S------------------------------------S-----------------------------
-----S-S---------------------------S---S-------S--------------------------S-----
----------------S----------------------------S----------------------------------
---------------------------------------------------------S-----------------S--S-
--------------------------------S-----------------------------------------------
S----S--------SS--S--S------SS---------SS-------------------S-----------S-------
----------------------------------------------------S------SS--------SS--S------
S-----S--------S---------------S---------S------------S---------------S--S------
-----S---S-------S-S-------------S------------------S---S-----------S---S-------
--------S---S--------------------------------------------------------------S----
-------------------------------S----S--SS---------S----------S--S-------S-------
-------------------------------S-------S----------------S-----------------------
--------------S-S-------------SSS---S-S----------------S-S----------------------
--S-----------S-----S---------------S----------------S-------------------S------
-------S---S-------------------SS-----------------------------------------------
--------------------------------------------------------------------------------
----------------------S----S----------S-----------------------S-------------S---
-------S-S----------------------SSSS--------------------------------------------
---------------------------------------------------------------------S----------
---------------------------------S--------------------------S-------------------
---------------------------S------------------------S-------------------S-------
--S----------------------S-----------------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S--------------S
-------------S-------------------S-----------S-------------------S---------SSSSS
SSSSSSSSSSS---------S-----------------------------S------------------------S-S--
-----S----------------S-----------S----S-------S-S-------S-----S-S-S---------S--
-S--------S-S---S------------------------------S------------S---SS--------------
---------------S-------------------------S--------------------------------------
---------------------S------S---------S---------------------S-------------S-----
-----------S--S-S-SSS-S--------------S-----------------S----------------S-------
--------------------
>forward_184
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----TTGTCCACTTTCTCCTGGCC--------------------------------------------------------
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>reverse_1354
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-------------------------------------------------------------------------ACAATGT
TTGCCCTACGTGC-------------------------------------------------------------------
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--------------------
>forward_1006
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------CCTCGATCTCGCCTGAACTT----------------------------------
--------------------------------------------------------------------------------
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--------------------
>reverse_2541
--------------------------------------------------------------------------------
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------------------------------------------------------------GGAGGTTCTCTTGTGCATGC
--------------------------------------------------------------------------------
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>forward_1380
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TTGCCCTACGTGCAACTCAA------------------------------------------------------------
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--------------------
>reverse_3071
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------------------------------CATGTTACCCTCCCCACCAC------------------------------
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--------------------
>forward_2286
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--------------------------TTAACACCCGCGACAAATGC----------------------------------
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>reverse_3157
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------------------------------------GTCACCTTAAGAAGCGCCGA------------------------
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>forward_2630
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--------------------------------------------------TCCAGCACAGCTTTCCTTGA----------
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>reverse_4359
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--------------------------------------GAAGCTGGGGTTCACCAAGA----------------------
--------------------------------------------------------------------------------
--------------------
