>input_sequence_33408
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--------------------------------------------------------------------------ATGGAG
GAAGCCAAGGGTGAGCATACGCACACCCACGCCGCGCTCTCTCGTCCATCCGTCCATCCGCC------------CGCCCG
CCCGCGGATCGCCACCGGCCGGCGGCAATTCGTCCTGCTCCGGATCGGT-----CGCGTGCTAGCTTTCCTTCTTCTTTT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAGAGCAATGGCGCCGATAGCATAAAAGGCAAAGCCACCGCCCTGCTTTT
GCCACATCTGGGAAGTCTTCTTACTTTTGCCACACAAAATCGTACTGCACCTAGCATTGGGAAAACAAACTAGGCCTGTA
GATAGATAGCCAGTTCTGTGCTCTGGTTAACAATTTTGTTCTCTGCTCCGATCACACGCAGTCACTCCTTCAAGGGCTGC
CCTGCAACTGTTTACAACCTTCCAAGTTCATTGGGAGTCTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTATGTGATGT--
---------------------------AATCCTTGTACGCATTTCATAGTTTCTTCTACCAGATT-TTGGGAA-AATCCT
GTGCAAATTATGAAATAACATGGCTGCCTCAGTAATCATCTTCTTTGGTCTTCCGCAGTTGTGGAGACCAGGGATGGAAC
TATCGCAGTTGCTTCAGCGTTTCCCGGTCATCAGGAAGGTACTAATTACCATTTGTCCTCCCTCTAGTTCTTACTTACCA
CACTGCAACTCTGCAAGGCAAGGCATATCTGACCATTGCAGGGCCCTTTGCTACATTTGTTATTTTCTGTAATTGGGGGG
CTATTCAGAAAGGCTTTCTTCTTTATGCTTATGTTTTGCCTCGTTCAACAGCCGTACAAGATAGGGATCACAAGTTCTTG
TCGAAAGCTGTAGAAGAGGCGTACAAAGGAGTTGACTGTGGCCATGGAGGACCGTTTGGCGCGGTCGTCGTCCGCAACGA
CGAAGTAATAGTTGGGTGCCATAACATGGTTTTGAACAACACCGATCCAACTGCCCATGCTGAAGTCACTGCAATAAGAG
AGGTAGGGTTCCATGTGCCCAAAGGTTATCCCCACCAACTACTTGACGCT-----TGTTGTTTGCATTTTGGTACTGAAT
AGTTCCTACCTTGTGGTAGCCTCACCTGCTGATATAGGTTGTGCCCATTTGGCCATTTGATTCTTCCTGCATATGAAACT
AGTTCTCACCAACTACTTGGTGCTTACTGTCACCTGTCGATATAGTCTGTATCCAATTCAGGCTTCATGCTTTTGGAACC
AGCACCACATCATTCTTGCAGAATGTATTTGTTATTTGTGCTCACCTGTCTACACAGATGAGACAGAATATGTTTTAGCC
TCTTTGTCCATTCTTGTACATCTTCATGTTTTAGATTTTCAGCTTTCCTGATGCTCACGTTAGTGGTGATATTATCTTGT
ACCACCTTGTCAAATTATGCTACTTCAGTGCTACTACATAAAGTTGAGTGTTCAAGCGTGTTATATACTTTGTTGAAGAC
AGGGCTAAATAAAGTTCCATGGTGATGCAAACAAACTCTACCAGCCTAACAACTGTTTCTTT-TAATTTTCATCAGAAAG
CTTGGTAATTGATGAGTTATCAGTGATGGATAGCCTTTATATTTTAAAATTTCCTTGCTGAATGGTA-------------
----------------------------------------------------ACAGAGTAGACACTGTCCACATTAGTGG
ATAAAAATATAACATATTTATTTTGACACAAGAACATGCATTTATTTTTCGGAATAATCCACTAAGGGCTGTTGTCAGTG
GCACTAGGTCGTATGGTTCATATTCCCTCTGAGCCTGTATATAATGCATGGCAGTTTTGCATTTTATATTGGTTCTTTTC
CATTGTCTGGTTATCTGTCTCACACAATCAGT-TTTCGCTTGTACTCTAGGCTTGCAAAAAGCTTGGGAAGATTGAGCTG
TCGGACTGCGAAATGTACGCATCATGTGAACCTTGCCCAATGTGTTTTGGGGCTGTTCATCTATCCCGGATCAAGGTTGG
CCC-TTACCTTACCATTCCTCATCTGGTACAATATGGTTTGTCTAATCCTTAATGAGCAATCTTGTTGAATGCTTCAATG
CAGAGGCTGGTGTACGGAGCCAAGGCGGAAGCTGCTATTGCCATTGGATTCGACGACTTCATTGCTGATGCTCTTAGAGG
AACTGGGTTCTACCAGAAGGCCAACATGGAGATCAAGCGAGCCGATGGGAATGGAGCTCTGCTTGCTGAACAAGTCTTTG
AGAACACCAAGGAGAAATTCCGAATGTACTAA------------------------------------------------
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>chr4A_1_TraesCS4A01G358800
GGAGGTAGTACTCTCTGGCTTCCAAAATGCAGTGCATATTTCTTTTATTTTCTAAAAGTCAAACACATTTATGTTTGAAC
AAAAAGTAGAGAAAGAAAAAACATCCATAATACAAAATCAGTATTCGTAAGATTCATCATCAAGTACACTTTCATGTTTT
ATTTATTTAGCATATAAGCTTGGTCAGCCACAAACATTATGGAGTGGAGGTAGCGTGGACATATATCTTATGACCGAGTC
TAATGAAACCAGTTTGATGAATAAAAAGTTGGTATATTTTTTCTGTAGACATGTTTGGATTTATAGACGTTTGATTCGAT
GTGATCAATGTTTTGCCCGTGAATCAAAGAGAGGTGCTCATAGGAGTACGGCGTGCGTGGGCGCCATGGACCTGATGAAA
TTGGCACCGTATGCCAACATGATTGTAATGATCTCCGTTGATTAGCACAATTCTTTTACTCGCAAAGAACACACTTTCTG
CTTAGACAGAAAGGGTGAGAGATAAAAAGTCGCACATGTGCGGCGGAGGATGAAGAAGAATCCCGGCGACGCAGGCCATG
TTCCGATCCC------------ATCCCACG-AACACGTCAGCCTTTCGTGTCGGCTCATCCCACGTCGTCAG---AAGGA
AAGAGTAAAATGCGAAC------GCGCCGCGGCAGCGTGATGCACGCGACCGACCGACCATGCCAACCGACGGTGGGCCG
CCCCG--------CCGCTCCATCACCGCCGTCCGTCACGCGCCGCCCTCCCGGTCCACCATCGGCGGGCGTCGGCGCTTG
CTTGCCTCCCTCTCTCTATCCCTATCCGGTTGCGTCCGGCACTCCGCCAGTGGCCCGGCGCGGCCCTATTTACACGCCGC
GCACGCGTCCACGACGACCCA----CACACCTCTTTCCTTCCTTCCCAATTCCCGTTCCTACGGACAGGCAGACACGCAA
CAGCCCGACGCGCATCTCGCTCGGGGAGCTCCGCCGCCGATCCGCCCGCCCGCTCGCCCCCTCACTCGCCCGCCATGGAG
GAAGCCAAGGGTGAGCATACGCACACCCACGCCGCGCTCTCTCGTCCATCCGTCCATCCGCC------------CGCCCG
CCCGCGGATCGCCACCGGCCGGCGGCAATTCGTCCTGCTCCGGATCGGT-----CGCGTGCTAGCTTTCCTTCTTCTTTT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAGAGCAATGGCGCCGATAGCATAAAAGGCAAAGCCACCGCCCTGCTTTT
GCCACATCTGGGAAGTCTTCTTACTTTTGCCACACAAAATCGTACTGCACCTAGCATTGGGAAAACAAACTAGGCCTGTA
GATAGATAGCCAGTTCTGTGCTCTGGTTAACAATTTTGTTCTCTGCTCCGATCACACGCAGTCACTCCTTCAAGGGCTGC
CCTGCAACTGTTTACAACCTTCCAAGTTCATTGGGAGTCTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTATGTGATGT--
---------------------------AATCCTTGTACGCATTTCATAGTTTCTTCTACCAGATT-TTGGGAA-AATCCT
GTGCAAATTATGAAATAACATGGCTGCCTCAGTAATCATCTTCTTTGGTCTTCCGCAGTTGTGGAGACCAGGGATGGAAC
TATCGCAGTTGCTTCAGCGTTTCCCGGTCATCAGGAAGGTACTAATTACCATTTGTCCTCCCTCTAGTTCTTACTTACCA
CACTGCAACTCTGCAAGGCAAGGCATATCTGACCATTGCAGGGCCCTTTGCTACATTTGTTATTTTCTGTAATTGGGGGG
CTATTCAGAAAGGCTTTCTTCTTTATGCTTATGTTTTGCCTCGTTCAACAGCCGTACAAGATAGGGATCACAAGTTCTTG
TCGAAAGCTGTAGAAGAGGCGTACAAAGGAGTTGACTGTGGCCATGGAGGACCGTTTGGCGCGGTCGTCGTCCGCAACGA
CGAAGTAATAGTTGGGTGCCATAACATGGTTTTGAACAACACCGATCCAACTGCCCATGCTGAAGTCACTGCAATAAGAG
AGGTAGGGTTCCATGTGCCCAAAGGTTATCCCCACCAACTACTTGACGCT-----TGTTGTTTGCATTTTGGTACTGAAT
AGTTCCTACCTTGTGGTAGCCTCACCTGCTGATATAGGTTGTGCCCATTTGGCCATTTGATTCTTCCTGCATATGAAACT
AGTTCTCACCAACTACTTGGTGCTTACTGTCACCTGTCGATATAGTCTGTATCCAATTCAGGCTTCATGCTTTTGGAACC
AGCACCACATCATTCTTGCAGAATGTATTTGTTATTTGTGCTCACCTGTCTACACAGATGAGACAGAATATGTTTTAGCC
TCTTTGTCCATTCTTGTACATCTTCATGTTTTAGATTTTCAGCTTTCCTGATGCTCACGTTAGTGGTGATATTATCTTGT
ACCACCTTGTCAAATTATGCTACTTCAGTGCTACTACATAAAGTTGAGTGTTCAAGCGTGTTATATACTTTGTTGAAGAC
AGGGCTAAATAAAGTTCCATGGTGATGCAAACAAACTCTACCAGCCTAACAACTGTTTCTTT-TAATTTTCATCAGAAAG
CTTGGTAATTGATGAGTTATCAGTGATGGATAGCCTTTATATTTTAAAATTTCCTTGCTGAATGGTA-------------
----------------------------------------------------ACAGAGTAGACACTGTCCACATTAGTGG
ATAAAAATATAACATATTTATTTTGACACAAGAACATGCATTTATTTTTCGGAATAATCCACTAAGGGCTGTTGTCAGTG
GCACTAGGTCGTATGGTTCATATTCCCTCTGAGCCTGTATATAATGCATGGCAGTTTTGCATTTTATATTGGTTCTTTTC
CATTGTCTGGTTATCTGTCTCACACAATCAGT-TTTCGCTTGTACTCTAGGCTTGCAAAAAGCTTGGGAAGATTGAGCTG
TCGGACTGCGAAATGTACGCATCATGTGAACCTTGCCCAATGTGTTTTGGGGCTGTTCATCTATCCCGGATCAAGGTTGG
CCC-TTACCTTACCATTCCTCATCTGGTACAATATGGTTTGTCTAATCCTTAATGAGCAATCTTGTTGAATGCTTCAATG
CAGAGGCTGGTGTACGGAGCCAAGGCGGAAGCTGCTATTGCCATTGGATTCGACGACTTCATTGCTGATGCTCTTAGAGG
AACTGGGTTCTACCAGAAGGCCAACATGGAGATCAAGCGAGCCGATGGGAATGGAGCTCTGCTTGCTGAACAAGTCTTTG
AGAACACCAAGGAGAAATTCCGAATGTACTAATGTGTAGC-AAAGACATGGTAGAATTTCACAGCATGAAAGACCCTGAT
GCTCAG---AAAAAATAATGTAATTGTCAACATTCTGTCATTGGTGATGGACCACAAACTATGAATTTGAATATACCATT
TGATTCTCATTACGCTTCTATTTCTCAGAAATAAGTATGTTATTGTTCGAGGAGGATCAGTACTACCTTGCTCCTTCATT
TGATCTTTCTTAATT--------------TGGGTACATTCCTGGTG---ATAATAAGGCCTTCATCATCAGCCCATCTTA
AAAAA------------------------ATACGGCATTTCATAATTTTTACATAGCAGAAATAACTGAATACTGTTTTT
CTAGCCATCCCATGTTTTTGGTTGTTTCCTCCTGCATTTCAGTTGATGTTTTTTGATTCGTTATTTGCATAGCAGCAATC
ATTGAATATGTTTTAATTCTGTGTAAGTGTTTAGATCTTTACTTGCTAAAAGTGAGTTTCCTCCTGCATTTCAACCATGC
ATAC-----------------TCAACTTGCAATGAAGGAAGCCTGCTCACAAAACTGAAC-ATATCTAAT-----TGTTC
TTAAAT-CTATGACTCAAAACTGAAATATTACAGTAATTTTGCTTTTGTTCTCATGCTCCAACAA-GGCTTTGGAAACAG
AGAACAAATCAA-GATCATGACAGAACAAGCTAGCACTGACACTCATCTCCACATCTATATACAAAGAAACAAATTGCAT
TCTAAGCAAAACTGATTGCAAAAATAAGATATACATGGCTAACACGATGCATCCGATGACGC-AAGCCCCTTTGCAACAA
ATAACAAGCATCTATATCTACCTACATTACAGCGACACCAACTGCAATAATGAATTTAGTAATATGTTGGCACTAGGCTT
ATTATGTATGGATGCCCGTGAACCAACGGCTAAAGAACTGCCACCGTCATAGCAGATCGATGTCTCT-CACAATCAGTTC
TGAGTTGCTCGCACGACTCTGGAGTCACAGAGTTTGAATATCCTTGAATAAGCGAACAATTCCAC
>chr5B_502
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---------------------ATAAAAAGTCGCGCATGTGCGGCGCAAGAT---GAAGAATCCCGGCGACGCAGGCCATG
TTCCGATCCCCCATCCCATCCCATCCCATGAAACACGTCAGCCTTTCGTGTCGGCTCATCCCACATCGTCC---AAAGGA
AAGAGTAAAATGCACATGCGCCAGCGCCGCGGCAGCGTGATGCACGCGACCGACCAA-----------------------
--CCG--------CCGCTCCATCACCGCCGTCCGTCACGCGCCGCCCTCCCTCCCGGTCCCCCGTCGGCGTCGCCGCTTG
CTTGCCTCCCTCTCTCTATCCCTATCCGGTTGCGTCCGGCACTCCGCCAGTGGCCCGGCGCGGCCCTATTTATACAGCAC
GCACGCG---ACGACGACCCACCCACACACACACCTCTCTCCTTCCCAATTCCCATTCCTACGGACAGGCAGACACGCAA
CAGCCCGGCGCGCATCTCGCTCGGGGAGCTCCGCCGCCGATCCGCCCGCCTCCCCCTCCCCTCGCTCGCCCGCCATGGAG
GAAGCCAAGGGTGAGCATACGCACACCCACGCCGCGCTCACTCATCCACCCATCCATCCGCC------------CGACCG
CGGA----CCGCCACCGGCCGGCGGCAATTCGTCCCGCTCCGGATCGGTCGCGTCGCGTGCTAGCTTTCCTTCCTCTTCT
TCTTTGTTAGTCGCTCTCGGGGGCGGCGGATCGCCGCCTCCTGCGCCGCGCCGGCCGATCCGACGAGCGTGGGGCGGATC
CGAGCGTGGGGCGCGTGCCGGACGGGGGCTGGGAAATGTGGCTGTTTTGTTTCGGA---TGGGTCCTCTGCTCTGCTTCG
A------------------------------------------CCGATAACATAAAAGGCAAAGCCACCGCTCTGCTTTC
GCCACATCTGGGAAGTCTGTTAGTTTTGCAATATGTGAAGTGATGTGCTCCTACCG--------------TACGCCTGTA
GAT---TACCCAGTTCTGCACTCTG----ACAATTTTGTTTTCTGCTCCGATTGCACGCAGTCACTCTTCCAAGGGCTGC
CCTGCTACTGCTTACAACCTTCCAAGTTCATGGAGGGTC----------------TTGTTTGTTTGTTTATGTGAT----
---------------------------AATTCTTGTGCGCATTTCATAGTTTCTTCTGCCAGATTGTTGGGTA-AATCCT
GTGCAAATTATGAAGTAACTTGGGTGGCTCAGGACTCATCTTCTTTGTTCTTCTGCAGTTGTGGAGACCAGGGATGGGAC
TATCGCAGTTGCTTCAGCGTTTCCCGGTCATCAGGAAGGTACTAATTACCATTT--CCTCTCTCTACTTCTTACTTACCA
CA--------CTGCAAGGCAAGGCATATCTGACCATTGCAGAACCCTTTGCTACATTTCTTGTTCTGTGTGATTGGAGAG
CTGCTCA-AAAGGCTTTCTTATATATGCTTATGTTTTGCCTCGTTTAACAGCGGTACAAGATAGGGATCACAAGTTCTTG
TCGAAAGCGGTAGAAGAGGCTTACAAAGGAGTTGACTGTGGCCATGGAGGCCCCTTTGGCGCGGTTGTCGTCCGCAACGA
CGAAGTAATAGTTGGGTGCCATAACATGGTTTTGAACAACACCGATCCAACTGCCCATGCTGAAGTCACTGCAATAAGAG
AGGTAGGGTGCCATGTGCACAGATGTTATCCCCACCAACTACAACTACTTGGTGCTGCTGTTTACATTTTGCTATTGAAT
AGT--------------AGCTCCACCTGCTGATATATGCTTG--------------------------------------
----------------------------------------------CTGTATCCAATACAGACTTCATGCTTTTGGAACC
AGTACCACAACATTCTTGCAGAATGTA-TTGTTATTTGTGCTCACCTGTCTACACAGCTGAGATAGAATATGTTCTAGCC
TCTTTGTCCATTCTTGTACATCTTCATGTTTTAGATTTTCAGCTTTCCTGATGCTCACATTAGTAGTGATATTATCTTGT
ATCACCTTGTCAAATTAAGCGACTTCAGAATG-----------------------------------CTTTGTTGAAGAC
AGGGCTAA----AGTTCCATAGTGATGCAAACAAACTCTACCAGCTTAAGAACTGTTTT-TTCTAATTTTCATCAGAAAG
CTTGGTAATGGATGAGTTGTCAGTGCTGG--AGCCTTTATATTTTAAAATGTCCTTGCTGAATGGTA-------------
----------------------------------------------------ACAGAGTAGGTACTGTCCACATTAGTGG
ATAAAATAG-AACATGTTTATTGTGACATCAAAACTTGCATTTATTTTTCTAAACAATCCACCAAGGGTTGTTGTTAGTG
TCA--------TATGGTTCGTATTCCCTCTGAGCTGGTATATAATGCTTGGTATTTTTGCATTTTATATCAGTTCCATTC
CATCGCGTGGTTATCCGTCTCACACAAACAGT-TTTCGCTTGTACTCTAGGCTTGCAAAAAGCTTGGGAAGATTGAGCTG
TCGGATTGCGAAATGTACGCCTCATGTGAGCCTTGCCCAATGTGTTTTGGGGCTGTTCATCTATCCCGGATCAAGGTTCG
CCCCTTGCCTTACCATTCCTCATCTGGTACAATATGCTTTGTCTAATCCTTAATTAGCAATCTTGTTGAATGCTTCAATG
CAGAGGCTGGTGTACGGAGCCAAGGCGGAAGCTGCTATTGCCATTGGATTCGACGACTTCATCGCTGATGCTCTGAGAGG
AACCGGGTTCTACCAGAAGGCCAACATGGAGATCAAGCGAGCAGATGGGAATGGAGCCCTGCTTGCTGAACAAGTCTTTG
AGAACACCAAGGAGAAATTCCGAATGTACTAATGTGTAGC-AAAGACATGGTAGAATTTCACAGCATGGAAGACCCTGAT
GCTCAGAAAAAAAAATAATGTAATTGTCAACATTCTGTCATTGGTGATGGACCACAAACTATCAATTTAAATATACCATT
TGATTCTCATTACGCTTCTATTTCTCAGAAATAAGTATGTTATTGTTCGAGGAAGATTAGTATTACCTTGCTCCTTCATT
TGATCTTTCTTAATTCTGAGATAGCAATTTGGATACATTGCTGGTGATAATAATAAGGCTTTCATCATCAGCCCATCTTT
AAAAAGTC------AGAGAAATCTATGAA-TACGGCATTTCATAATTTG--CATAGCAGAAACAACTGGATACAGTTTTT
CTAGCCATCACA----------TGTTTCCTCCTGCATTTCAGTTCATGTTTTTTGATTCGTTATTTACATAGCAGAAATC
GCTGAATACGTTTTAATTCTGTGTAAATATTTAGTCCTGAACTTGCTAAAAGTGAGTTTCCCACTGCATTTCAGCCAAGC
ATAAATGCCATTCCTTGCTATTCAACTTGCAATGAAGGAAGCCTACTCACAAAATTGGAC-ATATCCAATTGTTCTGTTC
TTAAAC-CTATGACTCAAAACTGAAATATTACAGTAATTTTGCTTTTGTTCTCATGCTCCAACAAGGGCTTTGGAAACAG
AGAACAAATCAAAGATCATGACAGAACAAGCTAGCACTGACATTCATCTCCACGTCTATATACAAAGAAACAAATTGCAT
TCTAAGCAAAACTGATTGCAAAAATAAGATATACATGGCTAACACGACGCATCCCATGACGCAAAGCCCCTTTGCAACAA
ATAACAAGCATATATATCTACCTACATTACAGCGACACCAACTGCAATAACGAATTTAGTAATATGCTGGCACTAGGCTT
ATTATGTATGGATGCCCGTGAACCAACGGCTAAAGAACTGCCACCGTCGTAGCAGATCGATGTCTCTTCACAATCTGCTC
TGAGCTGCTCGCACGACTCTGGAGTCACAGAGTTTGAATAGCCCTGGATAAGCGAACAATTCCAC
>chr5D_504
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-----------------------AAAAACCCGCACATGTGCGGCGCAAGATGAAGAAGAATCCCGGCGACGCAGACCACG
TTCCGATCCC------------ATCCCACGAAGCACGTCAGCCTTTCGTGTCGGCTCATCCCACGTCGAAATCGAAAGGA
AAGAGTAAAATGCACATGCGCC------GCGGCAGCGTGATGCACGCGACCGACCTA-----------------------
--CCGACGGTGGGCCGCTCCATCACCGCCGTCCGTCACGCGCCGCCCTCCCTCC--------------------------
-------CCCTCTCTATCCCTCTATCCGGTTGCGTCCGGTACTCCGCCAGTGGCCCGGCGCGGCCCTATTTATTCGCCGC
GCACGCG---ACGACGACCCC----CACACACACCTCCTTCCTTCCCAATTCCCATTCCTACGGACAGGCAGACACGCAA
CAGCCCGGCGCGCATCTCGCTCGGGGAGCTCCGCCGCCGATCCGCCCGCCTCCCCCTCCCCTCACTCGCCCGCCATGGAG
GAAGCCAAGGGTGAGCATACGCATACCCACGCCGCGCTCTCTCGTCCGTCCATCCATCCGCCCGCCCGCCCGCCCGACCG
AGGG----TCGCCACCGGCCGGCGGCAATTCGTCCTGCTCCGGATCGGTCGCGTCGCGTGCTTGCTTTCCTTCTTCTTA-
-----GTTAGTCGCTCTCGGGGGCGGCGGATCGCCGCCTCCTGCGCTGCGCCGGCCGATCAGTCGAGCGCCGGGCGGATC
CGAGCGGGGGCGCGC-GCCGGACGGGGGGTGGGAAATGTGGCTGTTTTGTTTCGGAGGATGGGTCCTCTGCTCTGCTCCG
A------------------------------------------CCGATAACATAAAAGGCAAAGGCAGGGCTCTGCTTTT
GCCACATCTGGGAAGTCTGTTAGTTTTCCCATCTGTCAAGTGATGTGCTCCTACCG--------------TACGCCTGTA
GATAGATTGCCAGTTCTCTACTCTGGTTAACGATTTTGTTTTCTGCTCCGATCACACGCACTCACTCCTCCAAGGCCTAC
CCTGCTACTGCTTACAACCTTCCAAGTTCACGGGGGATCTTGTTCATTTGTTTGTGTCATAATTCTTGCACACATTTCAT
AGTTTCTTCTATGTGACTTGGGTGATAAATTCTTGTACACATTTCATAGTTTCTTCTACCAGATT-TTGGATACAATCCT
GTGCAAATTATGAAGTAACTTGGGTGCCTCGGTAATCAACTTCTTCCTTCTTCTGCAGTTGTGGAGACCAGGGATGGGAC
TATCGCAGTTGCTTCTGCGTTTCCTGGTCATCAGGAAGGTACTAACTACCATTT--CCTCTCTCTACTTCTTACTTACCA
CA--------CTGCAAGGCAAGGCATATCTCACCATTGCAGGGCCCTTTGCTACATTTGCTATTTTCTGTAATTGGAGAG
CTGCTCA-AAAGGCTTTCTTGTTTATGCTTATGTTTTGCCTCGTTCAACAGCGGTACAAGATAGGGATCACAAGTTCTTG
TCGAAAGCCGTAGAAGAGGCTTACAAAGGAGTTGACTGTGGCCATGGAGGCCCGTTTGGCGCGGTTGTCGTCCGCAATGA
TGAAGTAATAGTTGGTTGCCATAACATGGTTTTGAACAACACCGATCCAACTGCCCATGCTGAAGTCACTGCAATAAGAG
AGGTAGGTTGCCATGTGGACAGAGGTTATCCCTAACAACTACTAGGTGCT-----TGCTGTTTACATTTTGCTACTGAAT
GTTTTTCC---TGTAGTGGCCTCATCTGCTGATATAGG------------------------------------------
----------------------------------------------CTGTATCCGATTCAGGCTTCATGCTTTTGGAACC
AGTACCACTACATTCTTGCAGAATTTA-TTGTTATTTGTGCTCACCTGTCGACACAACTGAGATGGCATATGTTCTAGCC
TC--TGTCCATTCTTGTACATCTTCATGTTTTACATTTTCAGTTTTCCTTATTCTCACATTAGTAGTGATATTATCTTGT
ATCACGTTGTCAAATTGAGCTACTTCAGTGTGACTACATAAAGTTGACTGTTCAAGCGTGTTATATACTTTATTGAAGAC
AGGGCTAA----AGTTCCATAGTGATGCAAACAAACACTTCCAGCCTAACAATTGTTTC-TT-TTATTTTCATCAGAAAG
GCTGGTAATGGATGAGTTATCATTGATGGATAGCCTTTATATTTTAACATTTCCTTGCTGAATGGTACTCCCTCCGTCCC
AAAATTCTTGTCTTAGATTTGTCTAAATACGGATGTATCTACGGAGGGAGTAACAGGGTAGGTACTGTCCACATTAGTGG
ATAAAATAG-AACATATTTATTTTGACATAAGAACATGTATTTATTTTTCTGAATAATCCACCAAGGGCTGTTGTTAGTG
GCACTAGGTTGTATGGTTCATATTCCCTCTGAGCCGGTATATAATGCATGGTAATTTTGCATTTTATATTATTTCATTTC
CATTGTTTGGTTATCCGTCTCACACAATCAGT-TTTTGCTTGTACTCTAGGCTTGCAAAAAGCTTGGAAAGATTGAGCTG
TCGGATTGTGAAATGTACGCATCATGTGAACCTTGCCCAATGTGTTTTGGGGCTGTCCATCTATCCCGGATCAAGGTTCA
CCCCTTACCTTACCATTCCTCATCCGGTACAATATGGTTTATCGAATCCTTAATTAACAATCTCGTTGAATGCTGCAATG
CAGAGGCTGGTGTACGGAGCCAAGGCGGAAGCTGCTATTGCCATTGGATTCGACGACTTCATTGCTGATGCTCTGAGAGG
AACTGGGTTCTACCAGAAGGCCAACATGGAGATTAAGCGAGCAGATGGGAATGGAGCTCTGCTTGCTGAACAAGTCTTTG
AGAACACCAAGGAGAAATTCCGAATGTACTAATGTGTAGC-AAAGACATGGTAGAATTTCACATCATGAAAGACCCTGAT
GCTCAG---AAAAAATAATGTAATTGTCAACATTCTGTCATTGGTGATGGACCACAAACTATCAATTTAAATATACCATT
TGATTCTCATTA-------------------TACGCATGTTATTATTCAAGGAAGATTAGTATTACCTTGCTCCTTCATT
TGATCTTTCTTAATTCTGAGATACTAATTTGGG---------GGTG---ATAATAAGATCTTCATCATCAGACTATCTTT
AAAAAAAAGTCTTAAGAGAAATCTATGAAATACAGCATTTCA--------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TAAAAGTGAGTTTCCTCCTGCATTTCAACCATGC
ATAAATGACATTTCTTGCTATTCAACTTGCAACGAAGGAAGCCTACTCACAAAATTGGGGAATATCCAATTGTTCTGTTC
TTAAAATCTACGACTCAAAACTGAAATATTACAGTAATTTTGCTTTTGTTCTCATGCTCCAACAA-GGCTTTGGAAACAG
AGAACAAATCAAAGATCGTGACAGAACAAGCTAGCACTGACATTCATCTCCACATCTATGTAC-AAGAAACAAATTGCAT
TCTAAGCAAAACTGATTGCAAAAATAAGATATACATGGCTAACACGACGCATCCCATGACGCAA-GCCCCTTTGCAACAA
ATAACAAGCATCTATATCTACCTACATTACAGCGACACCAACTGCAATAATGAATTTAGTAATATGTTGGCACTAGGCTT
ATTATGTATGGATGCCCGTGAACCAACGGCTAAAGAACTGCCACCGTCATAGCAGATCGATGTCTCTTCACAATCTGTTC
TGAGTTGCTCGCACGACTCTGGAGTCACAGAGTTTGAATAGCCCTGGATGAGCGAACAATTCCAC
>chr5B_2981
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-------------TCTGTATCAAATAATCGGTATTTTGCTTTCACTCTAGGCTTGCAAAAAGCTTGGCAAGATTGACTTG
TCGGATTGCGAAATGTATGCATCCTGCGAACCTTGTCCAATGTGTTTTAGCGCCGTTCATCTATCCCGGATCAAGGTTCG
CCCCTTACTGCTGTAGAATGCATGTAGCTTAATTTGTTTACTAACTAG------TAATAATCATGCTGAATTCTGCAATG
CAGAGGCTGGTGTATGGAGCCAAGGCAGAAGCTGCTGTTGCCATTGGATTTGACGCCTTCATTGCTGATGCTCTCGGAGG
AACTGGGCACTACCGTACGGCCAACCTGGAGATAAAGCGAGCAGATGGGAATGGAGCCCTGCTTGCTGAACAGGTCTTTG
AGAACACCAAGGGGAAATTTCGATTGAAATAATGTGTAGATAAAGACATGATGTGATTTCACATCATGGGAGCCCTTGAT
GCTCAG---AAAAAATAATGTAATTGTCAAAATTATGTCATTGGTGATGGACTAAAAACTATCAACTTAAATATACCATT
TGATTCTAATT---------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS------------------------S-S--------------------------------
-----------------------------------------------------------------------S--------
-------------SS-S--------------------------------------S-SSSSSSSSSSSSSSSSSSSSSSS
SS-------------------------------------------------SSS-SSS-SS-S-SS-------S------
------------------------------------------------------------------------S-------
-------SSS--------------------SSSSS-------------------S-------------------------
-------S------------------------------------------SS-S-SS-----------------------
---------------------------------------------------S------------------------S---
-SS-SSSS----------------------------------------------------------------------S-
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---------------------S--------
------------------SS-SSS---SS-SS-SSSS--SS-SSS---S----S-SSSSSSSSSSSSSSS--S-------
-------------------S--------------------S----------------------------S----------
-----S----S--------------------S---S--------SS------------------------------SS--
------------------------------S----------------------------------------S--------
--------------S----S---S-----------------------S-----S-----------------------S--
------------------------------------------------------SS----S-----S-------------
--SSSSSSSS------------------------------------------------------------------S-S-
--SS---S------------S-------------------------------S---------------------------
--------S-----------S-----------------------------S--------------S--------------
--------------------------------------------------------------------------------
---------S--------S--S---------------------S-SS----------S-----S-------S--------
----SSSSSSS---S-----------------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------
--S------S-----------------S-----------------------------S-----S----------S-----
----------------------------------------------------------S-----S---------------
-S---------------S------------SS---------------S--------------------------------
--------SSSS--------S--------------------------------------S--------------------
---------S----------------------------------------------------------------------
-------------------------------------------------------------SS-----------------
------SSSS------------------S---------------------S-----------S------------S----
---------S-------------------------S---------------S-S----------------S----S----
------S-------------------------------------------------------------------------
-----S------------------------------------------------------------------------S-
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------S-----
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----S-----------
-----------------------------------------------------S---S----S-----------------
---------------------------------------S---------------------------------------S
------------------------------------------------SSS-----------S-----S----S------
---------S--SSSSSSSSSS----------------------S---------------------S--------S----
SS------S-----------------S-S-----SS--SS----------------------------------------
---S----------------------------------------S---------S--S--------S-------------
-----S--------------------------------------------------------------------------
------------------------------------------S-------------------------------------
-----------------------------------------------S------S-------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
----------------------------------------S--S--S------------------
>forward_35
---------------TGGCTTCCAAAATGCAGTGC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_1808
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------GTCTTCCGCAGTTGTGGAGA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>forward_36
----------------GGCTTCCAAAATGCAGTGCA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_1928
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------ACTCTGCAAGGCAAGGCATA-----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>forward_1838
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------TTGTGGAGACCAGGGATGGA--
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>reverse_3023
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TAAGGGCTGTTGTCAGTG
GC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>forward_2262
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--GTAGGGTTCCATGTGCCCAA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_3483
--------------------------------------------------------------------------------
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------------------------------------------CGATGGGAATGGAGCTCTGC------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>forward_2619
--------------------------------------------------------------------------------
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---------------------------------------CAGCTTTCCTGATGCTCACG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------
>reverse_4556
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------AGTTC
TGAGTTGCTCGCACG--------------------------------------------------
