>input_sequence_33404
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-----------------------------------------ATGGAGACGAAGCGCGTCGGATTCGCGGAGCCGAGGATC
GAAGGCGACGGCGAGGCAGGGCTAGGAAGCCCAGTTCGCGGGGCCACGACCGGGGAAGAGGAGGCCGTCGTCGTCGGCGG
CGGCAAGGCAAACCCACGGCCGCTCCGCCGCAGAGGGGTCAACGTGAAGCGGAAGGCGGCCCTGAGGAGGAAGCACCTGC
CTCCCCGCGACGGGGAAAAGCGGCCGC---CTCCGGCCCGGAGCTCGGCGCCGGTGGCGGGGGATTACAG------GGAG
GAGGACGCGATCGCCGTGCACCGTCGGGTCTGGGAGAGGAGATGGGCCGGCAATTTCGGCTCCTTCGACGACGAAAGTGA
GAAGAAACC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------CT
CTACTTGCGTC--------------------TGATTTTTCTAGTGCCACGCCTTACTTGTTCAGTATAAGCATCTATCGA
CGCTGGAAAT----------------TGAAGCAATTTTGTTGCTGTTGTTGTTACATT-GGATTGGATTACACGCCACAG
CCACAAATCCTACGCATAGATCACAGACCTTTTGCACTGCATATTGCTAGGATCATATACATTATATAGTTACTGAAACT
AGACTGCTGGTGAGATTAAATCTGTTTTGCTGTTGCTGTTGTTAGATTAGATAGATTCAATGCCACAACCACAAATCCAA
CCCATTGACCACAGACCCTTTTGCACTGCGTAATTGCTAGGATAGCCTAGGAACGTAGTTACTGAAACTGGACCGCGGCT
GGTCAAATTAAAGCTGTTTTGTTGTTGCTCTTGTTAGATTAGATTGGATGCCACAGCCACGAACCCAAACCATTGATCAG
AGACAT-TTGCACTGCATAATTGCTGGGACAAG-GTTA----------------------CTGAAACTGAACTGCTGATC
GATTCAG-----GCAAGCCGTCCGTTTGCTGGTTCGCTGGTTCAGGGAGAACAGACAAACCGGCTGGTTAAATGTTCCAT
GGTTTGCCTGTTGAGCTAAAAAGTAAAAACTGTATGCCTGTTTT-------------TCTTTTCCATCTGATTGCATACA
TGGAACAAGGCTGGTAAAGATCCTAGTTCCAGTCTTTTCCTATTTATCTGGCTGTATGGTCCGTTTTCGATAACTGATTG
CTTATGTATAGAATGCCAACTCAGCCATAGATAAGAACATGGATGG-------CATTCATATCTATTTTCTGGTGTATGC
TGCTACTTAGCGTTGTCTGT----TACTGTTTTCCAATAACATGCTAGTACCATCGTCTAAGTGTCTGCCTATA-TCTTT
ATTTGTGCTGCAAG-------------TATTTATCACCAACTTAATTTGTCTTCTCGCAGCGGGTATCGGTCCCATGTGC
TACACATCCGCACCGCCCACCCCGGAATACCTTTTCAGAGAACAGGCCGTGCAGATCTTCTCCATCAGGGTCAGGGCCCC
AACAGATGGTCTCAAGTGGCCACTGCATGTCCATGGCTATGTCGCCACCAGAGACTCGATGGATCGCAATCGCAACTATC
TCTTTAGGCGCGCAAGGGATAACTGCCAAACCCTCACGCAAAACGTGAGTACCACCTAAT--------TTTCTCTGTTTT
ACCTGCCTTGTCAACAATCTCTTGCTGCTAGTACTACCCGGCCTCTTAATCTACTGTGCAATTAGATGTACTACTTCTCA
TTCAATGTTTACGCTGACCAACCTTTATG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TTTATCTAATTTCAACCTTGAACAACTAAGCAATCG---AACAAATAAACATCCTTTTGGATCAACCTTTG
ATTAATATAATATGC--TGGTTGCATCTCTGCTTGTTGGA----AACAACAAGACATATTTCTACAAGTCTGTCAG---T
TGATTAATCACAGGGTAATGCTTGTGTTGCAGGATCCATTCTTGCTGTTAACAGGCCCATCCCGCGCGGTAGTGTTCCTC
GATCCGATCACGTTCGAAGTCCAGCTAAAAGTGAAGGGAAAAGGGGAGTCCGAAGACGAAATGCTGGCTTTTGCTGTCTT
CTACTACGGCGACGGGAATGCTTGTGCACGCAAGCTCTCCATGTCCATCCCCCACAACCGCTGCACGCTCGAGTACGAAG
TGGCGCTGCGGCCGCGCTCGGTCGAGGCCACCATCAGCGTCAAGATCGTCGAAGGGTCATGGCCGGAGAACCACCGAGGA
CAGGTTGTCGCCCTCACCTCCGGCGTAGACGGGGAGGTCGTCTTGCTTCGTTCTGGAGACAGAGAACTGCCCGTCGGTTC
GGACGGCGCGATCGAGCTCTCGAGGCGGGTTGTTTCTGTAGATCTAAGAGAGAAACTGGTGGTTGCTGTGGACGCCTCTC
TGTCCGGTTTCCTTGCGCGGGGTACAGCTGAGTTCAAGCCGGAGAACTATGGCACGAGCCACGGCGTGTGCGACCTCGGT
TCCTGCAAGATTCAAGTCGCCGTTGCTTGGTCCCTTTTCGTTATTGTTTTGGGAAGATAG--------------------
--------------------------------------------------------------------------------
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--------------------
>chr2B_1_TraesCS2B01G588100
TAGTACCGGTTGGTAACACCAACCGGTACTAAAGGTCCCCCATACCAGGGCGCGAGCTCACGCCACGTGGTGGCACTTTA
GCGCCGGTTCGTGCCGAACCGGTACTAAAGGGGGGGGGGCTTTAGTGCCCACACTTTAGTGCCGGTTATGGAACCGGCAC
TAAAGGCCCTTACGAACCGGCGCTAAAGCTCCATTTTCTACTAGTGAGGCAGAAGGGCTCGCACCCCTGTAACTCATACG
CATATAATCCAGTCGACCGCCTCCGGGCTCCGAGACGTAGGGCTGTTACTTCCTCCGAGAAGGGCCTAAACTCGTAACAT
CCTTGCGTATACAACTACTCCATAGCTAGGATCTTGCCTCTCCATACCTACCACCTATTCTACTGTCAGGCTTAGAACCA
CGACAGATGAGGCTGGACCCCTGGCACGCTTGCATTAAAAAAGGAGAGGACTCCGGAGGTTTCTAGACACTGCTATGTGG
GCCAAGTTAGGTGGACGCATTCACTTCGGCAGAGTTGGTAATTGGGCGGCTGACATGCGAGCCCGAGGCGGACACCAAGC
GGACCGTCTAGACCGTTTTATGCCTGTGTGAACGTAAATCAGACGCAAATATGGGTCAAAAATGCATACGGACGAACAAC
GAGCGGACCGATTTTGAGTTTATGTCGGAGTGTTAGGCATGTGTTTTATCTGTTTCAACGCAAACGGACACGCACGGACT
ATTTGTGTCGCGCGTTGGAGTTTCCCTTGTATAACCTCAAGGTTCTCAACTCAGGAGAAGCCCGACTGGAATCCG-GCGT
TCTTTCAATTTCATCCCTTCTCCGCCCTTGGATGGAGATCCTGCGGCCCAGGATTACCCCGATGCAAGGAAGCCCTCTCC
GACTCTGCTTCGGCCCCGCGTGGTTGATTAGGCTGAGCGTGGGTGTGAAGCACGGCTGTAGGGTGGTGGGGTGGCAGTGG
GACTCAGCGTGAGCGGCGTCGCGGCGGAGGTGGGGTTGGGGATGGAGACGAAGCGCGTCGGATTCGCGGAGCCGAGGATC
GAAGGCGACGGCGAGGCAGGGCTAGGAAGCCCAGTTCGCGGGGCCACGACCGGGGAAGAGGAGGCCGTCGTCGTCGGCGG
CGGCAAGGCAAACCCACGGCCGCTCCGCCGCAGAGGGGTCAACGTGAAGCGGAAGGCGGCCCTGAGGAGGAAGCACCTGC
CTCCCCGCGACGGGGAAAAGCGGCCGC---CTCCGGCCCGGAGCTCGGCGCCGGTGGCGGGGGATTACAG------GGAG
GAGGACGCGATCGCCGTGCACCGTCGGGTCTGGGAGAGGAGATGGGCCGGCAATTTCGGCTCCTTCGACGACGAAAGTGA
GAAGAAACC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------CT
CTACTTGCGTC--------------------TGATTTTTCTAGTGCCACGCCTTACTTGTTCAGTATAAGCATCTATCGA
CGCTGGAAAT----------------TGAAGCAATTTTGTTGCTGTTGTTGTTACATT-GGATTGGATTACACGCCACAG
CCACAAATCCTACGCATAGATCACAGACCTTTTGCACTGCATATTGCTAGGATCATATACATTATATAGTTACTGAAACT
AGACTGCTGGTGAGATTAAATCTGTTTTGCTGTTGCTGTTGTTAGATTAGATAGATTCAATGCCACAACCACAAATCCAA
CCCATTGACCACAGACCCTTTTGCACTGCGTAATTGCTAGGATAGCCTAGGAACGTAGTTACTGAAACTGGACCGCGGCT
GGTCAAATTAAAGCTGTTTTGTTGTTGCTCTTGTTAGATTAGATTGGATGCCACAGCCACGAACCCAAACCATTGATCAG
AGACAT-TTGCACTGCATAATTGCTGGGACAAG-GTTA----------------------CTGAAACTGAACTGCTGATC
GATTCAG-----GCAAGCCGTCCGTTTGCTGGTTCGCTGGTTCAGGGAGAACAGACAAACCGGCTGGTTAAATGTTCCAT
GGTTTGCCTGTTGAGCTAAAAAGTAAAAACTGTATGCCTGTTTT-------------TCTTTTCCATCTGATTGCATACA
TGGAACAAGGCTGGTAAAGATCCTAGTTCCAGTCTTTTCCTATTTATCTGGCTGTATGGTCCGTTTTCGATAACTGATTG
CTTATGTATAGAATGCCAACTCAGCCATAGATAAGAACATGGATGG-------CATTCATATCTATTTTCTGGTGTATGC
TGCTACTTAGCGTTGTCTGT----TACTGTTTTCCAATAACATGCTAGTACCATCGTCTAAGTGTCTGCCTATA-TCTTT
ATTTGTGCTGCAAG-------------TATTTATCACCAACTTAATTTGTCTTCTCGCAGCGGGTATCGGTCCCATGTGC
TACACATCCGCACCGCCCACCCCGGAATACCTTTTCAGAGAACAGGCCGTGCAGATCTTCTCCATCAGGGTCAGGGCCCC
AACAGATGGTCTCAAGTGGCCACTGCATGTCCATGGCTATGTCGCCACCAGAGACTCGATGGATCGCAATCGCAACTATC
TCTTTAGGCGCGCAAGGGATAACTGCCAAACCCTCACGCAAAACGTGAGTACCACCTAAT--------TTTCTCTGTTTT
ACCTGCCTTGTCAACAATCTCTTGCTGCTAGTACTACCCGGCCTCTTAATCTACTGTGCAATTAGATGTACTACTTCTCA
TTCAATGTTTACGCTGACCAACCTTTATG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TTTATCTAATTTCAACCTTGAACAACTAAGCAATCG---AACAAATAAACATCCTTTTGGATCAACCTTTG
ATTAATATAATATGC--TGGTTGCATCTCTGCTTGTTGGA----AACAACAAGACATATTTCTACAAGTCTGTCAG---T
TGATTAATCACAGGGTAATGCTTGTGTTGCAGGATCCATTCTTGCTGTTAACAGGCCCATCCCGCGCGGTAGTGTTCCTC
GATCCGATCACGTTCGAAGTCCAGCTAAAAGTGAAGGGAAAAGGGGAGTCCGAAGACGAAATGCTGGCTTTTGCTGTCTT
CTACTACGGCGACGGGAATGCTTGTGCACGCAAGCTCTCCATGTCCATCCCCCACAACCGCTGCACGCTCGAGTACGAAG
TGGCGCTGCGGCCGCGCTCGGTCGAGGCCACCATCAGCGTCAAGATCGTCGAAGGGTCATGGCCGGAGAACCACCGAGGA
CAGGTTGTCGCCCTCACCTCCGGCGTAGACGGGGAGGTCGTCTTGCTTCGTTCTGGAGACAGAGAACTGCCCGTCGGTTC
GGACGGCGCGATCGAGCTCTCGAGGCGGGTTGTTTCTGTAGATCTAAGAGAGAAACTGGTGGTTGCTGTGGACGCCTCTC
TGTCCGGTTTCCTTGCGCGGGGTACAGCTGAGTTCAAGCCGGAGAACTATGGCACGAGCCACGGCGTGTGCGACCTCGGT
TCCTGCAAGATTCAAGTCGCCGTTGCTTGGTCCCTTTTCGTTATTGTTTTGGGAAGATAGATAGACCGTGTTGGGTAGTG
TTTGGTGGTTGCCTGTTTAGCGATTTTCAGTGGTAGCATCCCTGAAGCTGTTGAACTGTTTCTGTATGGTCATGTCATGA
TGCCTTTTCGTGGCACTCAGCTTGTTATGTGTTTGCTCAGATGTTATGGCACTCAATTTGTAATTTTATACCCTAGGAAT
GCATGGTTTCTAAAAGAAGAAGGTATATTTCTGCACAAATTAGCACATGTATATTTCCCTGTACACATTGCTTCCTATAT
CATCAATTCTGAAGGAAGTATATGACCACATGTTGTTTCCTTTATCATCAGTTTGGGTGTACATGGCCAAATTATTTCCC
TGAACGTTGTAATATTTATGCCACTCGGGTCCAGTGTTACTATTTACTCCCTCTGTATCGTAGTGTCAAAAAACGTCTTA
TATTTTGATACAGAGGGAGTATGCTGTGTACCTGACACCATCCGATTCAAGGCATTTGTATGCTCTTCTTATTGTACCTG
GGAATAGTTAGAGAACCAGTTTTTTTGGGAGCATAAGAGAATCAGCTTAGCTAAACTTATGACATGTTTTGGACCTCCAA
TCTTTATTTTATCTTTACCTCTTTATTACCTAATATTAAAAGGAGGATTGTTTCTCCACTTATTTTGTCATCCTTTTATG
TTTTTTGTACTTTGTCCGTTTTTTGTAAAATAAAAAAGGAAAAATTTGGGCTCATGAGGTCTCGAACCAAGGTGGGCAGG
AAGTGAGCAAAACACACTAACCAACTCGGCTTGTGATTGTGTGCAAACACAGGAAACTTCCTTATTATAGGAGGAGCGGG
GTTTCTCAAAAAATAAAATAAATTCGAAAGGCAGGCCAGACCACTGCTCACTATAAACGCAAATACTAATCTCCGCACAT
CTAGAAACGGCTGCCCCATGCATGCACGTAAAAAAAAGGCTGCGCCATGTGTTACGGATGGCCCATGCACCTAAAAAAGG
GGCTGCCCCATATGTGTCGC
>chr2B_759
AAT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------GTTCTCAACTCAGGAGAAGCCCGACTAGTAGATATGTGT
TCTTCCGATTTCAGCCGTGCTCCACCCTTGGATGGAGATCCTGCGGCCCAGGGTCACCCCA-------GAAACCCACTCC
GACTCTGCTTCGTCCCCGCGTGGGTGATTAGGCTGAGCGTGGGCGTGAAGCATA--------------------------
---------TGGGCGGCAGGGTCGGGAAGTGGGGAGTGGCGATGG------------------------------GGATC
GAAGGCGACGGCGAGGCACGGCCGGGAAGTCCAGTTCGCCGGGTCGCCACCGGGGAAGGCGAGGCG------GTCGGCGG
CGGCGAGGCAAACGCACGGTCGCCACGCCGCAGAGGGGTGAAGGTGAAGCG------GGCCCTGAGGAGGAAGCCCCTGC
CTCCCCGCGGCGAGAAGCAGCGGCCGGCTTCTCCGGCCCGGAGCTCGGCGCCGGCGGAGGAGGAGTACAGCCACAGGGAG
GAGGACGCCATCACCAGGAGCCGTCGGATCTGGGAGAGGCGCTGGGCCGGCCGCTACGGCGCCTTTGACAACGAAAGTAA
GGAGAAGCATCT--------------------------------------------------------------------
------------------------------------------------------------------------CATCGATT
CTATTCCTCAAAATCTTGATTCCCCTTGCCTGCCATGTCAC---------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------TTTTCTAGTGCCACCCCATATATGTTCAGTAGATAGAATGATTAA
TTGCACAAGGGACCAATGATCCATACTGAAGCAGTTTTGTTGCTCTTGTTGTTACATTTGGATTGGATTG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GATTGGATTGGGTGCCACTGCCACAAACCCAACCCATTGACCAG
GGACACCTTGCATTGCATATTGGATATTGCTATGCTAGGATCATCATTTTTACTGAAAGTCTGAAACTCAATTGCTCATC
CGGTT------------------------------GCTGGGTCAGGGAGAACAGACAAACCCATTGATCAGTGACCCTTT
GCATTTTGCAATTCCTAATGCTAGGATCATACTCACTGAAACTGGACTGCTGATCGGTCTTTTCCTTCTTATTA------
------------------------------------------TTCAACTGCCCATATGTTCCGGTTACAGTAACTGATTA
CTTCTGTATACAGTACCAA----ACCCAACCCCGGCAATAGTCATGAATGAACCGTCAGTATCTACTTTCTGATGTATGT
TGCTACCTAGCGGTGTATGATATCTGAGTAGCATATC----------------------AAGTATCTATGAATA-CCTTA
AATTTGGCTTTCTTCTTTTTACTGGGATATCTAGCAATAACTTAATTTTTCTTCTTGCAGCAAGTATCGGTCCCATGCGC
TACACATTCAAACCGCTTACCCCAGAATACCTATTCACAGAACAGACCGTGCAAATCTTCTCCATCAGGGTCAGGGCCCC
AACAGATGGTCTCAGGTGGCCACTGCATGTCCATGGCCACATTGCCACCAGAGACTCGATGGATCAGAATCGCAACTATC
TCTTCAGGCGCACAAGGGATAACTGCCAAAGCCTCACACAAGACGTGAGTACCATCTATCTAGTTGTCTCTGTTTGTTTT
ACCTTCTTCGTCAACAATCACTTGCTCCTA--------------------------------------------------
--------------------------------------------------------------------------------
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--------------------
>chr3B_1190
--------------------------------------------------------------------------------
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----------------------------------------------------------------------AAGCGCCTGC
CTCCCCATGATGGGGAAAAGCGGCCAC---CTCTGGCCCGGAGCTCGGCGCCGGTGGCGGGGGATTACAG------GGAG
GAGCTCGGACCCG-------------------------------------------------------------------
-------------------------GTGTTGCTGTGAAAGCAACTGTTGAGGGAGCTGACCCCCAGCCGTCGTCCTGCAC
ATCGGTGACTGAATTGGCGGTCAGGCAACAGCAGTCCGCCGCCCCGTCCACCCCAATCCCAACGGCAGCAAGCAGCGATT
CAATTCCTCTCACGGTCTAAGATCCAGAGGTACTGCTGCACCGCACTACTGCCTACATTTTCGGTTCCTCTCACAGTTTC
TGCTTTAGTCTGCTGAACTTAAATAAGAAGTGAAGCTCCCTGTCATTTTATCCGAGTTGCAGGTGAGCTCATGGATGGAT
CAGATTCACTTTGCGCCGGAAAGGAAAGCTCCCTCAGCCATGCCCTTTGGAAGAGGAGATTAAGTCAGGTTGTATTGTAT
TGTACACAGCTCTATTGCAAGTTTTTGGACATAAATATGGAAGTAGATTGTAGCAGTATCTTGCAAACAACTAGTAGCAC
TATTACAGGGTAGTGTCCGATGATTATTCATACATCTTCAGACGTAATGGACTGAAAGCATCAAAATACAGTGGTTGCTA
TTGTTGCAACACACGCGTAGAAAAAGTACAACCTTGAATGTTGACAGAGTATGGTAGTCCCTGTTTTGATTTATGGCATA
AGTTCATTTTCATACGAGACAAAAGGCTTCGGAGGCATCTGCAGACTCTGAAGCCTCCCTGTTAGCATGTTAACAACCTT
TGTCATCGACAGACTGTTTCTCGGCTTCCACTAGATGCACCACAGTGCCACCATAGCCAGCTGCCTCACCTTGTCTTTCT
CTTCTTGAGTCGTTTCCAACGTAATTGCGTTTGATTTTTCTAGTGCCACGCCTTACTTGTTCAGTATAAGCACCTATCGA
CGCTGGAAAT----------------TGAAGCAATTTTGTTGCTGCTGTTGTTACATT-GGATTGGATTACACGCCACAG
CCACAAATCCTACGCATAGATCACAGACCCTTTGCCCCGCATATTGCTAGGATCATAC----TATATAGTTACTGCAACT
AGATTGCTGGTGAGATTAAATCTGTTTCGTTGTTGCTGTTGTTAGATTAGAT----TCAATGCCACAACCACAAATCCAA
CCCATTGACCACAGACTC-TTTGCACTGCATAATTGCTAGGATAGCCTAGGAACATAGTTACTGAAACTGGACCGC---T
GGTCAAATTAAAGCTGCTTTGTTGTTGCTCTTGTTAGATTAGATTGGATGCCACAGCCACGAATCCAAACCATTGATCAG
AGACCT-TTGCACTGCATAGTTGCTGGGATAATAGTTA----------------------CTGAAACTGAACTGCTGATT
GATTTAGGGCAGGCAAGCCGTCCGTTTGCTGCTTCGCTGGTTCCAGGAGAACAG--------------------------
--------------------------------------------------------------------------------
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--------------------
>chr5B_1190
--------------------------------------------------------------------------------
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----------------------------------------------------------------------AAGCGCCTGC
CTCCCCGCGACGGGGAAAAGCGGCCGC---CTCCGGCCCGGAGCTCGGCGCCGGTGGCGGGGTATTACAG------GGAG
GAGGACGCGATCGCCATGCACCGTCGGGTCTGGGAGAGGAGATGGGCTGGCAATTTCGGCTCCTTCGACGATGAAAGTGA
GAAGAAACCGAGACAAGGTGAGGCAGTGTTGCTGTGAAAGCAAGTGTTGAGGGAGCTGACCCCAGGGCATCGCCCTACAC
ATCGGTGACTGAATTGGCGCTCAGGTAGCAGCAGCCTGCCGCCCCGTCCACCCCAATCCTAATGGCAGCAAGCAGCGATT
CGATTCCTCTCACGGTCTAAGATCAAGAGGTACTACTGCACCACACTACTGCCTACATTTTCGGTTCCTCTCACAGTTTC
TGCTTTAGTCTGCTGAACTTAAATAAGAAGTGAAGCTCCCTGTCATTTTATCTGAGTTGCAGGTGAGCTCATGGATGGAT
CAGATTC--TTTGTGCCGGAAAGGAAAGCTCCCTCAGCCATGCCCTCCGGAAGAGGAGATTAAGTGAGGTTGTATTGTAT
TGTACACAACTCTATTGCATGTTTTTGGACATAAATATGGAAGTAGATTGTAGCAGTATCTTGCAAACAACTAGTATCAC
TATTACAGGGTAGTGTCCGGTGATTGTTCATACATCTTCAGACCTAATGGACTGAAAGCATCAAAATACAGTGGTTGCTA
TTGTTGCAACACACGCGTAGACAAAGTACAACCTTGAATGTTGACAGAGTATGGTAGTCCCTGTTTTGATTTATGGCATA
AGTTCATTTTCATACGAGAC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TGAAACTGGACCGC---T
GGTCAAATTAAAGCTGCTTTGTTGTTGCTCTTGTTAGATTAGATTGGATGCCACAGCCATGAATCCAAACCATTGATCAG
AGACCT-TTGCACTGCATAGTTGCTGGGACAATAGTTA----------------------CTGAAACTGAATTGCTGATT
GATTCAGGGCAGGCAAGCCGTCCGTTTGCTGCTTCGCTGGTTCAGGGAGAAC----------------------------
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--------------------
>chr1A_1999
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------TACA
TGGAACAAGGCCGGTAAAGATCCTGGTTACAGTCTTTTCCTGTTCAACTGCTCATATGGTCTGGTTTTTG--------TA
CTTCTATATACAATACCAACCCAATCCAACCACAGCAAAGTTCATGAATTAACCATTAATGTCTACTTTCTGGTGTAGCT
TGCTACTTAGCCATTAGCCGTGTATACTGCTTTCCGATAACAACAAGCTAGTACTGGTATTTCAGTATTTATCTGTCTTT
CTTTGTACTGCAAG-------------TATGTACCAATAACTTAATTTGGCTTCTTGCAGCAAGTATCGGTCCCATGTGC
TACACATCTGAACCACCCACCCCGGAATACCTTTTCAGAGAACAGACTGTGCAGATCTTCTCCATCAGGGTCAGGACCCC
AACAGATGGTCTCAAGTGGCCGCTGCATGTCCATGGCTATGTCGCCACCAGAGACTCAATGGATCATAATCGCAACTATC
TCTTCAGGCGCACA-GGGATAACTGCCAAACCTTTACCCAGAAGGTAAGTGCCATCTACCAG--TGTGTCTGTTTGTTTT
ACTGTCTTCGTTAATCTTGTATTTTTGGTCTCCTAATCTGCTACACTCTTGTAGACGT----------------TTCTCA
TTCTTTTTTCCCCATGTTTCATTCAGAGTTCTAGGTAACCCATTAAGTTAAAATCCTAGTATCTTCTCTGTAAAAAAAAA
AAGGAGGACAGACCCAGTGCATAGAAGCTCCCACACAAGGTGGGGTCTGGGGAGGGATTATAGGAACCTAGTCTTACCCC
TGCAAAGTGCAATGCAGAGAGGCTGGTTCGAACCCAGGACCTCTTGGCACACTCTTTTTATAAGTGGTGATCTGACTATG
TTTCGATCGGGTAGTAATTTCAGCATGTTGCTTTCGTGTACTAGAAGCACCGTGTGTTTATGGATTAGGTGCATGTTAAG
CTGTATGGTTTTATCTAATTTCAACCTTGAACCACTTCTAAACAATCAAACACATAAGCATTGCTTTGAATCAACCTTAG
ATTAATATTGTTTTGGTTGGTTGCATCTGTCCTTGTTCTGAAATAATAACAAGACCTAAATCTACAAGTCTGTCACCGAT
TGATTAATCAATGA-TAATGCTTGTGTTGCAGGATCCATTCTTGCTGCTAACGGGCCCATCCCGTGCGGTAGTGTACCTT
GGTCCGATCACATTTGAAGTCCAGCTAAAAGTAAAGGGCGAAGGAGAGTCCGAAGATGAGATGCTGGCTTTTGGTGTCTT
CTACTATGGTGATGGGAATGCTTGTGCACGCAAGCTCTCTATGTCTGTCCCCTACAAGCGGTGCACACTCGAGTATGAAG
TGGCGCTTCGGCCACGCTCGGTCGAGGCCACCATCAGTATCAAGGTCATTGATGGGTCATGGCCAGAGAACCACCATGGA
CAAGTCGTTGCCCTCACCTCCGGTGTGGATGGGAAGGTCATCCTGCTAGACG---------GAGAACTGCCCGTCGGTCC
GGACGGCGCGATCGAGCTCTCAAGGCGAGTTGTTTCTGTGGATTTAAGAGAGAAACTGATAGTTGCTGTGGATGCTTCCC
TGTCCGGTTTTCCCGCGCAAGCCACCGCCGAATTCATGCCGGAGAACTCTGGCATGAGCGGCCGCATTTGCGACCTCGGT
TCCTGCAAGATTCAAGTCACCGTTGCTTGGTCCCTCTTTGTTATTGTTTTGTGAAC------AGACTCTGTTGGGTGGTG
CTTGGTGGTTGC--------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------
>SNPs
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------S-S-SSSS--S--
----S-S------S--S-S----S----------------------------S-S-----SSSSSSSS---S---S----
------------S----------S-------------------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS--S-----SSS-SS-S-S--SS---SS---S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
------------------S---SS-----S---------S---S-S-S----------SS-----SSSSSSS--------
----S--------S-----S---SS--------------S--S--------SSSSSS-----------------S-----
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
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--S----S----------------------------------------------------------------S-------
--------------------------------------------------------------------------------
-----------------------------S-----S-S-------------------SSSSS-------------S----
---S-----------------------S-S----------------------SSSS------------------------
----------------S-S----------S------------------------S---------------------SSS-
----------------S---------------------------------------------------------------
-------------------S------------S-----------------------------------------------
-------------------------------S-----------------------------SSS--S-S-SSSSSS-SS-
-SS--SSSSSS-SSSSS-SSSSSSS-SS-SSS-SSSSSSSSS-S---------------------S---S---SSS----
-----------S------------S---S------------S--S-S---S-SS---------S----SS---------S
---S------S---S-----S--S--SS-SSSS--S-S-S-SSSS------------S-------S-------------S
------------S---S--S---------S-----S------SSSSSS--SS-SS-SSS----S---SSSS---------
------------------------------S--S--SS-----------------S-----SS-----------------
----------S----------------------------------S----------------------------------
-----------------------------------------------------------------SS-------------
----S------S-------------------------S----------------S---SS---------S-S-S------
----S-S-S---------------------SSSSS-S-S-SSSSSS-SS-S--SSSSSSSSSSSSSSSSSSSSS------
---SS-S--SS-SS--SSSS-SSSSS-SS---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S---SSSS--SSS-------S----S---SSS----S---------S-
--------SS-S-SS-------------S-S------SSS------S--------S--SS---------------S----
----------SS-SS--------------------------------S----S-----------S----------S---S
-S---------S--S-----------------S-----SS----S-----------S--S-------------S------
------S--S--S--------------------------S-----SS-----S----S--S-----S--------S----
-------S-----S-----------------------SS-----S--S-S--S-----------S----------SS---
--S--S--S--------------S--S--S---S-----S--S----SSSSSSSSSSSSSS-----------------S-
---------------------S-----S-----------S---S--------------S-S-----------S--S--S-
----------S-SS----SS-SS--S--S--S----S-----------S-----S----SS-S--S-S------------
------------------S----------------S--S------------S---SSSSSSS----SS--------S---
S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS
>forward_288
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TCCGAGACGTAGGGCTGTTA--------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_2752
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-------------------------------GTTCGCTGGTTCAGGGAGAA-----------------------------
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--------------------
>forward_807
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------TGGAATCCGGCGT
TCTTTCA-------------------------------------------------------------------------
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--------------------
>reverse_3934
--------------------------------------------------------------------------------
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-------------GCTGGTTGCATCTCTGCTTG-----------------------------------------------
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--------------------
>forward_2816
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------CCAT
GGTTTGCCTGTTGAGC----------------------------------------------------------------
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--------------------
>reverse_4113
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--------------------------------GAAGGGAAAAGGGGAGTCCG----------------------------
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--------------------
>forward_3486
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--------------------------GCTAGTACTACCCGGCCTCT----------------------------------
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>reverse_5387
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--------------------------CGGCTTGTGATTGTGTGCAA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------
