>input_sequence_33335
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----------------------ATGGCGACGCACCACCCGGCCTCCCCGACCGGCGCCGGCGCCGGCGGCAAGTCCCCCT
CCTCCTCGCCCTCGCCGCCGCCGGCCGTGCGCCTGGCGGCGTCGCAGGCGGCGGCGGTGGCGGCGATCCAGCCCAGCTCG
CCGCGCTACTTCTTCTCCTCCCTCGC---------CGCCTCCTCCTCGCCGCACCGCCGCATCGCCATCGCCGTCGACCT
GTCCGACGAGTCCGCCTTCGCCGTCAAGTGGGCCGTGCAGAACTACCTGCGCCCGGGCGACGCCGTCGTGCTCCTCCACG
TGCGCCCCACCTCCGTGCT----------------------CTACGGCGCCGACTGGGGCTCCATCCCCGTCACCGT---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------CGACGACGGCGA
CGAGAAGGGGG---GAGGAGGCGCGGCG---------------CCG---GCGTCCGGGGACCCGGAGGAGGACGCGCGCA
AGAAGCGGGAGGAGGACTTCGACGCCTTCACCTCCACCAAGTCGCAGGACCTGGCGCAGCCGCTCGTCGCCGCGCAGATT
CCCTTCAAGATCCACATCGTCAAGGACCACGACATGAAGGAGCGCCTCTGCCTCGAGGCCGAGCGCCTCGGCCTCTCCGC
CATGATCATGGGCAGCCGCGGCTTCGGCGCCTCCCGCAGGGCAGGTAATGGCAGGCTAGGGAGTGTCAGCGACTACTGCG
TGCACCACTGCGTCTGCCCCGTGGTGGTTGTCAGATACCCTGATGACGCCGGAGCGTCGGGCGGTGCCGAGTCTGTGGGG
GATGAGCTAAGGACGGTGCCTGAGAACGAGGTGGTGTTCCATGAGGCACCAGAGGGGCAGAAAGGTCTGTTCCTTTGCTT
CACCTCGTTTGTACTTTCCATTGCATAGTTTTGTTTGCCCATGAAGTAGGTA-TGAAATGTTATGTGTTACTAGTATTCA
GGGTGGCAAATTCAGAGAAGTAAAA-----ATTTGGACACTGG-AAATGATTAGAGTGCGTTTGATAGTGATGGCAAGGA
AGAAGACACATGATGAAGAGTGTCGCTAT---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TAGTAAAC
CCGTCGCATTGTGTTAGTCATTAGCACTAATTCACTACAGAAGTCCGGTGAATAGCCCAGCCAATCTGTAAAGTAGCGGA
AACTGGAAATGCATAGCCCAGTGAAAATGAAAGTAAAAATTTGGACACTGGAAATGATTAGAATGCATTTGATAGTGATG
GCAAGGAAGGAGACTGGCTATGCTAATTAGTAAACTGGTTGCATTGCATTAGCACTAATTCACTACAGAAGTCCAGTGAA
TACCCTAGTGAATCTGCATAGTAACGGAAACTGGAAATGCATAGACTAGTGAAAATACCATAACACAAAACAGGTTGCCT
CTGAAACTGTGAATTAGCAAAACCGTTGTACAGAGAATAGCATGCCAAGCTACATTTCACATTGTGTTGCCTTTCTGCTC
TGACTGAGTCG-ATATTTGACCTGTGCGCTGTTTGCTTAGTTGCATTTGACATCACTACTATCTATCATATGCATACCTA
GCAGATATGCACTTCATTTATGAATTTGATTAAGCTGCTTTCATTATTGGATGATGGAGCTTTGAATTCTCTTTTGTATG
CTGAAATTTGCTAAAGTTGTCTTCTCATACGCGATAAGAATGGAGGATTGCTGCAATTTATCTAACTGAAAGCCTCAAAA
AAGGAAACGGTATTGTATATT--GTAGATCTAGTGAGTTTTACCCGCTCACCATTTGCAGATACTGAAGTTGCAGTTTCA
TTGGGGTGGATTC-GAGAAAACACCTTACTAGTCACTGTTATGTTTGTTCATCT--GTATATCTTAGAAAATCATAATGC
AAACTTTTTTGTGTTTGATGGAAACTGATTTCATGAGAATATGTGGAGGAAGAATGAAAGAGGTCTTTCAGTTACCTTTA
GGTAGACGTAGACTTATATCGAATTGTGCTCAGAATCTTGTCATGTAGC-------------------------------
------CTATCATTTGCGCTTGTAGTTCCAAACCGA----------CAATAGTGCCCAATGTAAGATGCATGGACATATA
TGTAAGATGCATGGGCATATCCAGACGGCATCATCTGGAAAGGTGAACT--TACTGCTTTAAAGAGTAT-----------
-ATTGTCTTCCACACAAAGTC--AGATGCTCAGACTTGAAAACACCTACTAGTCTTGGGCATACACACCCTGAGGCACTG
CCTTCTGATATGCTTATCTTTTGGTTGAACATAAGAAAATAAAACT--------CATAATATTTGCTTGCTTTCATTACG
TGCATCCCACCATAATATGTGCAGCATAACATTGACATTGCTTGATCGCTACCTAGTTGGTGTCTATTTCAGG-------
----------CTGTATGCTCCTTTGTTATTGCTGATGTTATTCTG------TGTACTGTCTTGTTGGTTGGTGAGTTTAT
TCGTGTGCTCATATCATGAATAAGATTTGGATTTCTCCTGTCTTGACAGAAAACTGA-----------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr1B_1_TraesCS1B01G333600
ACGGAGCTCGAGGACACATGTCCACCACAAGGATGCCGCCGACGCCACGACATCCCCGCTTGAACAGACTGCTTCCCAGA
TCCTTCACCAACCATAGAGATGATCACCTCGCCGGAGAAGAATCCGGAGCTTCTTTATTCAGCATCGCCATCGCCGCCGC
TGAAGCCAAGATGTCGAACGATCCAAAACCATAAGCTTCTTGGGCCGTAAAATCTAAAGTTAAAACGATCCACACGCGTG
GGATCCGGCGACCCCCCTCGTCACCGACGACCAAAAGGTCACCGGCGGAGGAGAGCCGCCGGAAGACAACGTGGGAAGGA
GCGGCACTTCTGATGGCAGGGGCTAGGTTTTGCTACCAGGTTCTACGTGGAGATTATGTACTGTCAAAAACACGGCGTAT
GAGCGATGTACACTGCACAATGTCCGTATTTTCACGTCACATCATAGTCAGCGACCAATCAAATTCCTGTGTACGGTGAC
TAAAGTGACCTCGCGAAGCAAGTTCAAGTACCGACAATGAATTTTACTCGAGTTAAGGCCAGTTCTTTTGGGCGGCTCAA
AAATTAAGCTGCTTCTTCCCCGCTAAAAGAATAAGCCGTCCTATATATTTGTTGAGATTTCTAAATTAGTTATACTATAA
CTAGTTTAGAAGCCCCATGAACAAGAAAGACGGCTTATGAAAAAAGTTAGGAGGGGACGGCTTCGGGCTGTAAATCTCAT
CTAACATAAATGAAAGAAAGCGTAAAGCGACAAAACCCGCAGTCA-----------------------------------
--------------------------------------------------------------------------------
---------------------GGCGGCGGCTACGTGTCCAGGCCAGAATACGCCAGCGCCGCCGCAGTTTCACAAGAAAC
CGGCAGCAGTTCCAGTTCCTCAGTCCACCGCAAGTTGCACAGCCCCAAATCTCAATCTTTGGCAAAACCCTCGTCTCCTC
TCCCCCCATTCTCTCCTGAGATTCCCCTCATCAGATCGAGAGCTG------CACAGTAGTGTTCCGCATTCGGATCGAGC
AGCCGGAGGACCAACAACCATCATGGCGACGCACCACCCGGCCTCCCCGACCGGCGCCGGCGCCGGCGGCAAGTCCCCCT
CCTCCTCGCCCTCGCCGCCGCCGGCCGTGCGCCTGGCGGCGTCGCAGGCGGCGGCGGTGGCGGCGATCCAGCCCAGCTCG
CCGCGCTACTTCTTCTCCTCCCTCGC---------CGCCTCCTCCTCGCCGCACCGCCGCATCGCCATCGCCGTCGACCT
GTCCGACGAGTCCGCCTTCGCCGTCAAGTGGGCCGTGCAGAACTACCTGCGCCCGGGCGACGCCGTCGTGCTCCTCCACG
TGCGCCCCACCTCCGTGCT----------------------CTACGGCGCCGACTGGGGCTCCATCCCCGTCACCGT---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------CGACGACGGCGA
CGAGAAGGGGG---GAGGAGGCGCGGCG---------------CCG---GCGTCCGGGGACCCGGAGGAGGACGCGCGCA
AGAAGCGGGAGGAGGACTTCGACGCCTTCACCTCCACCAAGTCGCAGGACCTGGCGCAGCCGCTCGTCGCCGCGCAGATT
CCCTTCAAGATCCACATCGTCAAGGACCACGACATGAAGGAGCGCCTCTGCCTCGAGGCCGAGCGCCTCGGCCTCTCCGC
CATGATCATGGGCAGCCGCGGCTTCGGCGCCTCCCGCAGGGCAGGTAATGGCAGGCTAGGGAGTGTCAGCGACTACTGCG
TGCACCACTGCGTCTGCCCCGTGGTGGTTGTCAGATACCCTGATGACGCCGGAGCGTCGGGCGGTGCCGAGTCTGTGGGG
GATGAGCTAAGGACGGTGCCTGAGAACGAGGTGGTGTTCCATGAGGCACCAGAGGGGCAGAAAGGTCTGTTCCTTTGCTT
CACCTCGTTTGTACTTTCCATTGCATAGTTTTGTTTGCCCATGAAGTAGGTA-TGAAATGTTATGTGTTACTAGTATTCA
GGGTGGCAAATTCAGAGAAGTAAAA-----ATTTGGACACTGG-AAATGATTAGAGTGCGTTTGATAGTGATGGCAAGGA
AGAAGACACATGATGAAGAGTGTCGCTAT---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TAGTAAAC
CCGTCGCATTGTGTTAGTCATTAGCACTAATTCACTACAGAAGTCCGGTGAATAGCCCAGCCAATCTGTAAAGTAGCGGA
AACTGGAAATGCATAGCCCAGTGAAAATGAAAGTAAAAATTTGGACACTGGAAATGATTAGAATGCATTTGATAGTGATG
GCAAGGAAGGAGACTGGCTATGCTAATTAGTAAACTGGTTGCATTGCATTAGCACTAATTCACTACAGAAGTCCAGTGAA
TACCCTAGTGAATCTGCATAGTAACGGAAACTGGAAATGCATAGACTAGTGAAAATACCATAACACAAAACAGGTTGCCT
CTGAAACTGTGAATTAGCAAAACCGTTGTACAGAGAATAGCATGCCAAGCTACATTTCACATTGTGTTGCCTTTCTGCTC
TGACTGAGTCG-ATATTTGACCTGTGCGCTGTTTGCTTAGTTGCATTTGACATCACTACTATCTATCATATGCATACCTA
GCAGATATGCACTTCATTTATGAATTTGATTAAGCTGCTTTCATTATTGGATGATGGAGCTTTGAATTCTCTTTTGTATG
CTGAAATTTGCTAAAGTTGTCTTCTCATACGCGATAAGAATGGAGGATTGCTGCAATTTATCTAACTGAAAGCCTCAAAA
AAGGAAACGGTATTGTATATT--GTAGATCTAGTGAGTTTTACCCGCTCACCATTTGCAGATACTGAAGTTGCAGTTTCA
TTGGGGTGGATTC-GAGAAAACACCTTACTAGTCACTGTTATGTTTGTTCATCT--GTATATCTTAGAAAATCATAATGC
AAACTTTTTTGTGTTTGATGGAAACTGATTTCATGAGAATATGTGGAGGAAGAATGAAAGAGGTCTTTCAGTTACCTTTA
GGTAGACGTAGACTTATATCGAATTGTGCTCAGAATCTTGTCATGTAGC-------------------------------
------CTATCATTTGCGCTTGTAGTTCCAAACCGA----------CAATAGTGCCCAATGTAAGATGCATGGACATATA
TGTAAGATGCATGGGCATATCCAGACGGCATCATCTGGAAAGGTGAACT--TACTGCTTTAAAGAGTAT-----------
-ATTGTCTTCCACACAAAGTC--AGATGCTCAGACTTGAAAACACCTACTAGTCTTGGGCATACACACCCTGAGGCACTG
CCTTCTGATATGCTTATCTTTTGGTTGAACATAAGAAAATAAAACT--------CATAATATTTGCTTGCTTTCATTACG
TGCATCCCACCATAATATGTGCAGCATAACATTGACATTGCTTGATCGCTACCTAGTTGGTGTCTATTTCAGG-------
----------CTGTATGCTCCTTTGTTATTGCTGATGTTATTCTG------TGTACTGTCTTGTTGGTTGGTGAGTTTAT
TCGTGTGCTCATATCATGAATAAGATTTGGATTTCTCCTGTCTTGACAGAAAACTGAGGGTAATAGCAAA-GCACCGAGC
AGCCAGATGAAAGAG-GAGAGACCAAGTCTTGCTTGATGCCAAACCCCCT-------TGTAACTGAGTGGTCTTTCCACT
CTGCTTTGCACTTCTGAGTTTGTATCAGACTCAT-GTAGATCATGGACCAGTCCTTGCTGTTTCGCTTCCTGAGAATTGA
AATGAGAATAATGTTATTCTACATATGGTAGCTGTTAACCTGTTGTATGAATGTTTCTGCTTGGCC-CCCCGGAACATGA
TTTCGTATGCCGACTTGTTTTTATTGCCATTGCCCATTGGTGACCAATCCTATGTTTTTTCGTTTCTCCGA---------
-------------------------TAAGTGTAGATTATTGGTGGATCTTGGTTGCTTTGCTGTTGGAAAGAAGTGCTGT
TTTTCTGCATATAGGAGCTACTG-------------TGTTTCTACTTGCCTC----GCTGTGTTCATTTGGTTACCTATT
TTGCACGGGGCAGTTTTTGTAGACAGGCATAATCACAGATTTTGCATGGGGCAGTTCCTGCATATAGGAGTCGGGGTCGC
CGGTCTGCAGATTAGTTTGCTCAAATCTGAGCTACCACCGGCTCTTTTTTCAGAGAGAGAAGCTACTACAGGCTCTTGTG
TGCAATGGATCATGGCTTCCGAGCAAATACCGAGTTTCTTGGCAAATCTTCCAGCCTTGCCTTGCTTGGTGTCTCCTTTG
GAAACATAAAATTTTATGTTGAATACACATGCACAAAGAAAATATTGACTTAGGGACTGTTCGGAGTCTCTCTGCTTCAC
GCTGCCGCTCCTGGAGCTGGCGGAGTTTTAGTTCAAAACTGCGGAGTGAGTGAATGGGCACTCCTCATATTCCTAAAATC
CATACATCGACAAAACTCGGGAGAAACAAAAAGAACAAACATACAAAAATCTTGTTCAAAACAAAACCAGATCCTACTCC
AGGGGAGGAACATGCATCTCCCTTTTTCCTTCTCCGTGCAATTGTTCCTGTGTGCCTTACTACTAGATACATCCATTTC
>chr4B_2
-CGGAGCCCGAGGACACATGTCCACCACAAGGATGCCGCCGCCGCCATGACATCCCCGCTTGAACAGACTGGTTCCCAGA
TCCTTCACCGACCATAGAGATGATCGCCTCGCCGGAGAAGAATCCGGAGCTTCTTTATTCAGCATCGTCGTCGCCACCGC
CGAAGCCAAGACGTCGAACGATC---------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------CAAAACCCTAAGCTTCTTGGGCCCTAAATCCTAAAGCTATAAATGATCCA
CACACGCGGTATCCGGCGACCCTCCTCACCACTAACGACCAAAAGGTCGCCGGCGGAGGAGAGCCGCCGGAAAACGGTGC
CGGAAGGAGCGGCTCTCCCGTGGCGGCGGCTAGGTTTCTCGCTACAGGAGG-----------------------------
---------------------------------------------------------------AAAACCCTCGACCCGCT
TATGTTCCGTGGTAGCATAGCAGAACGTCTTTGAGCTTGACACCAA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CGCCCGT---------CACCTGCCTCCGGCAGCACCATAGCAGCCACTGCCATCCATGAAC
CACGAGCCCAGCACATGTTTCGTCTTTCAGATGTCGTTGATGCAGACCACAATCTGCATCC--------GCTCCTCGACT
ACCTCCCAAGCTCCGTGCCGACGTTGGAGCGGACGACGTCGCAACGGCGGAGCCCGAGGACACATGTCCACCACAAGGAT
GCCGCCGCCGCCATGACATCCCCGCTTGAACAGACCGGTTCCCAGATCCTTCACCGACCATAGAGATGATCGCCTCGCCG
AAGAAGAATCTGGAGCTTCTTTATTCAGCATCGTCGTCGCCGCCGCCGAAGCCAAGACGTCGAACGATCCAAAACCCTAA
GCTTCTTGGGCCCTAAAACCTAAAGTTATAAACGATCCACACATGCGGTATCCGGCGACCCCCCTCACCACTGACGACCA
AAAGGTCGCCG---GCGGAGGAGAGCCG---------------CCG---GAAAACGGTGCCG------------------
--------------------------------------------------------------------------------
-----------------------------------GAAGGAGCGGCTCTCCTGTGGCGGCGGCTA---------------
--------------------------------------------------------------------------------
-------------------------GGTTTCTCGCTACAGG---------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr1A_730
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---------ATCAAAGAAAGCGTAAAGTGACAAAACCCGCAGTCA-----------------------------------
--------------------------------------------------------------------------------
---------------------GGCGGCGGCTACGTGTCCAGGCCAGAATACGCCAGCGCCGCCGCAGTTTCACAAGAAAC
CGGCGGCAGTTCCAGTTCCTCAGTCCACCGCAAGTTGCACAGCCCCAAATCTCAATCTTTGGCAAAACCCTCGCCTCCCC
TCCCC-CATTCTCCCGTGAGATTCCCCTCATCAGATCGAGAGCTGCACCTCCACAGTAGCGTTCCGCATTCGGATCGAGC
AGCCGGAGGGCCAACCATGGC---GGCGACGCACCACCCGGCCTCCCCGACCGGCGCCGGC---------AAGTCCCCCT
CCTCCTCCCCCTCGCCGCCGACGCCTGTGCGCCTGGCGGCGGCGCAGGCGGCGGCGGTGGCGGCGATCCAGCCCAGCTCG
CCGCGCTACTTCTTCTCCTCCCTCGC---------GGCCTCCTCCTCGCCGCACCGCCGCATCGCCATCGCCGTCGACCT
GTCCGACGAGTCCGCCTTCGCCGTCAAGTGGGCCGTGCAGAACTACCTGCGCCCGGGCGACGCCGTGGTGCTCCTCCATG
TGCGCCCCACCTCCGTGCT----------------------CTACGGCGCCGACTGGGGCTCCATCCCCGTCTCCGT---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------CGACGACGGCGA
CGCGGAGGGGGAAGGAGGAGGCGCGGCG---------------CCG---GCGTCCGGGGACCCGGAGGAGGACGCGCGCA
AGAAGCGGGAGGAGGACTTCGACGCCTTCACCTCCACCAAGTCGCAGGACCTGGCGCAGCCGCTCGTCGCCGCGCAGATC
CCCTTCAAGATCCACATCGTCAAGGACCACGACATGAAGGAGCGCCTCTGCCTCGAGGCCGAGCGCCTCGGCCTCTCCGC
CATGATCATGGGCAGCCGCGGCTTCGGCGCCTCCCGCAGGGCAGGCAACGGCAGGCTCGGGAGTGTCAGCGACTACTGCG
TGCACCACTGCGTCTGCCCCGTCGTGGTTGTCAGGTACCCTGATGACGCCGGAGCGGCTGGCGGTGCCGAGTCTGTGGGG
GATGAGCTGCGGACGGTGCCTGAGAACGAGGTGGTGTTCCACGAGGCGCCAGAGGGTCAGAAAGGTCTGTTCCTTTGCTT
CACCTCGTTTGTACTTTCCATTGCATAGTTTTGTTTACCCATGAAGTAGGTAATGAACTGTTATGCGT---TAGTATTCA
GGGTGGCAAATTCAGAAAAATAAAA-----ATTTGGACACTGG-AAATGATTAGAATGCGTTTGATAGTGATGGCGAGGA
AGAAGACACATTATGAAGAGTGTCGCTAT---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TAGTAAAC
TCGTCGCATTGGATTAGGCATTAGCACTAATTCACTACAGAAGTCCGGTGAATAGCCCAGCCAATCTGTAAAGTAGCGGA
AACTGGAAATGCATAGCCCAGTGAAAATGAAAGTAAAAATTCGGACACTGGAAATGATTAGAAAGCATTTGATAGTGATG
GCAGGGTAGGAGAGTCGCTATGGTGTTATTT-AACTGGTTGCATTGCATTAGCACTAATTCACTACAAAAGTCCAGTGAC
TACCCTAGTGAATCTGCATAGTAACGGAAACTGGAAATTCATACACTAGTGAAAATACCATAACATAAAATCGGTTGCCT
CTGAAACTGTGAACTAGCAAAACCGTTGTACAGAGAATAGCATGCCAAGCG----TTCACATTGTGTTGCTGTTCTGCTC
TGACTGAGTCG-ATAT------TGTGCGCTGTTTGCTTAGTTGCATTTGACATCACTATTATCTATCATATGCATACCTA
GCGGATATGCACTTCATTTATGAATTTGATTAAACTGCTTTCATTATTGGATGTTGGAGCTTTGAATTCTCTTTTGTATG
CCGAAATGTGCTCAAGTTGTCTTCTTATACGTGATAAGAATGGAGGATTGGTGCAATTTATCAAACTGAAAGTCTCAAAA
AAGGAAACTGTATTCTATATT--GTAGATCTAGTGAG----------------------GATATTGAAGTCGCAGTTTCA
TTGGGGGTGGATTAGAGAAAACACCGTACTAGTCACTGTTATGTTTGTTCATCTGTACATCCCTTAGAAAATCACAATGG
AAACTTTTTTGTGTGTGATGGAAACTGATTTCATGAGAATATGTGGAGGAAGAATGAAAGAGATCTTTCAGTTACCTTTA
GGTACACGTAGACTTACATCGAATTGTGCTCAAAATCTTGTCATGTAGC-------------------------------
------CTGTCATTTGCACTTGTAGTTCCAAACCGA----------CAAT------------------------------
-GTAAGATGCATGGACATATCCAGACGGCATCATCTGGAAAGGGGAACTTATACTGCTTTAAAGAGTAT-----------
-ATTGTCGTCCACACAAAGTC--AGATGCTCAGACTTGAAAACACCTACTAGTCTTGGGCATACACACCCTGAGGCACTG
CCTTCTTATATGCTTATCTTTTGGTTGAACATAAGAAAATAAAACTATCCTGAGCATAACATTTGCTTGCTTCCATCATG
TGCATCACACCATAATATGCGCAGCGTAACATTGACATTGCTTGATCGCTACCTAGTTGGTGTCTATTTCAGGTCATTGC
CTTTTACAAACTGTATGCTCCTTTGTTATTGCCGATGTTATTCTG------TGTACTGTCTTGTTGGTTGGTGAGTTTAT
TCGCGTGCTCATATCATGAATAAGATTTGGATTTCTCCTGTCTTGACAGAAAACTGAGGGTAATAGCAAAAGCACAGAGC
AGCCAGATGAAAGAG-GAGAGAGCAAGTCTTGCTTGATGCCAAACCCCCT-------TGTAACTGAGTGGTCTTTCCACT
CTGCTTTGCACTT-TGTGTTTGTATCAGACTCGT-GTAGATCATGGACCAGTCCTTGCTGCTTCCCTTCCTGAGAATTGA
AATGAGAATAATGTTATTCTGCATATTGTAGCTGTTAACCTGTTGTATGAATGTTTCTGCTTGGCC-CCCTGGAACATGA
TTTCGTATGCCGACTTGTTTTCATTG-------CCATTGGTGACCAATCCTATGTTTTTTGTTTGTTTCTCCATCGTCTT
TGCTTTTGCATAATTCTGCTTGCAGTAAGTGTAGATTATTGACGGATCTTGGTTGCTTTGCTGTTGGAAAGAAGTACTAT
GTTCCTGCATATAGGAGCTACTTTTTGGATAATGGATGTTTCTACTTGCCTCACTTGCTGTGTTCATTTGGTTACCGATT
TTGCATGGGGCAGTTTGTGTAGACTGGCATAATCAC--------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr1D_733
--------------------------------------------------------------------------------
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------------AAAGAAAGCGTAAAGTGACAAAACCCGCAGTCA-----------------------------------
--------------------------------------------------------------------------------
---------------------GGCGGCGGCTACGTGTCCAGGCCAGAATACGCCAGCGCCGCCGCAGTTTCACAAGGAAC
CGGCAGCAGTTCCAGTTCCTCAGTCCACCGCAAGTTGCACAGCCCCAAATCTCAATCTTTGGCAAAACCCTCGCCTCCTC
TCCCC-CATTCTCTCGTGAGATTCCCCTCATCAGATCGAGAGCTGCAC------AGCAGTGTTCCGCATTCGGGTCGAGC
AGCCGGAGGACCAACCATGGC---GGCGACGCACCACCCGGCCTCCCCGACCGGCGCCGGCGCCGGCGGCAAGTCCCCGT
CCTCCTCTCCCTCGCCGCCGCCGGCCGTGCGCCTGGCGGCGTCGCAGGCGGCGGCCGTCGCGGCGATCCAGCCCAGCTCG
CCGCGCTACTTCTTCTCCTCCCTCGC---------GGCCTCCTCCTCGCCGCACCGCCGCATCGCCATCGCCGTCGACCT
GTCCGACGAGTCCGCCTTCGCCGTCAAGTGGGCCGTGCAGAACTACCTGCGCCCGGGCGACGCCGTCGTGCTCCTGCACG
TGCGCCCCACCTCCGTGCT----------------------CTACGGCGCCGACTGGGGCTCCATCCCCGTCTCCGT---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------CGACGACGGCGA
CGGGGAGGGGGGAGGAGGAGGCGCGGCG---------------CCG---GCGTCCGGGGACCCGGAGGAGGACGCGCGCA
AGAAGCGGGAGGAGGACTTCGACGCCTTCACCTCCACCAAGTCGCAGGACCTGGCGCAGCCGCTCGTCGCCGCGCAGATC
CCCTTCAAGATCCACATCGTCAAGGACCACGACATGAAGGAGCGCCTCTGCCTCGAGGCCGAGCGCCTCGGCCTCTCCGC
CATGATCATGGGCAGCCGCGGCTTCGGCGCCTCTCGCAGGGCAGGTAACGGCAGGCTCGGGAGTGTCAGCGACTACTGCG
TGCACCACTGCGTCTGCCCCGTGGTGGTTGTCAGGTACCCTGATGACGCCGGGGCTGCGGGCGGTGCCGAGTCTGTGGGG
GATGAGCTGCGGACGGTGCCTGAGAACGAGGTGGTGTTCCATGAGGCGCCAGAGGGGCAGAAAGGTCGGTTCCTTTGCTT
CATCTCGTACTTTGTTTG--------------------CCATGAAGTAGGTAACGAAATGTTCTGTATGATACGG-TTCA
GGATGGCTAATTCAGGAAAATTAAATAAAAATTTGGACATTGCCAAATGGTCAGAATGCATTTGATAGTGATGGCAAGGA
AGGAGACACACGATGAAGAGTGTTGCTACTACCTCCATCCGGGTTTACTAGTCCCCCTCGTATTTTGGGTCATATTTTGA
CCTTAAATGTAACTAATAAAATATAAGTTATATGTAACAAAAATAATATCATAGGAAACTACATTCAAGTAATAATTCAA
CAATATTATTTTTGGTCATGCATTAACATTTTGCTAATCAAATACAATATGTGGTTGGAGTTTGATCCAAGATACGATGG
GGACTAATAAACTCAAACGGAGGTACTCCCTAGTACAAAGTTGGGTCATCTATTTTGGAACGGAGGGAGTAGTAGTTAAC
TGGTCGCATT-------GCACTAGCACTAATTCACTACAGAAGTCCAGTGAATGGCCTAGTGAATCTGTATAATAGCGGA
TACTGGAAATACATAGCCCAGT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GAAAATACCAAAACACAAAACAGGTTGCCT
CTGGAACTGTGAG-TAGCAAAACAGCTGTACGGACAATGGCCTGTCAAGCTACATTGCACATTATGTTGCTGTTCTGCTC
TGGCTGAGTCAAATATTTGACCTGTATGTTG-TTACTTAGTTGCATTTGACACTACTATTATCTATCCTATGCATACCTA
GCAGATATGCACTTCATTTATGAATGGAATTAAACTGTTTTCATTATTGAATGATGGAGCTTTGAATTGTGTTTTATATG
TTGAAATGTGCTAA-GTTGTCTTCTTACC--CGATAAGAATGGATGATTGCTGCAAGTAATCAAATTGAAAGTCTC-AGA
ATGGGAACTGTATTGTATGTTTTGTAGATCTAGA----------------------------------------------
-----------------AAAACACCTTTCAAGTTACTGTTATGTTTGTTCATCTATGTATCCCTTGTAAAATTACAATTG
TTTTTTTTTTTTG-GTGATGGAAATTGATTTCATGAGAATATGTGGAGGAAGAATGAAAGATGTCTTTCAGTTACCTTTA
GGTAGATGTAGACTTATTTTGAATT-TGCTCTGAATCTTGTCATGTGCTTATCGTCCCATGGGTTAGGACCTAAGAGTGA
TGTCTTCTACCATTTGCACTTGTAGTTCCAAACTGATAACAACTGCCAAT------------------------------
-GTAAGATGCATGGACATATCCAGGTGGCATCATCTAGAAAGTGGAACT--TCTTGCTTTAATGAGTACTCCGTATTTGT
CATTGTGTTCCACACAAAGTCGGAGATGCTCAGACTTGAAA-CACCTACTAGTCG-GGGTATACACACCCTGAGGCACTG
TCTTTTTAGATGCTTATCTTTTGATCGAACATAAGAAAATAAAACCATCCAGAACATACCATTTGTTCGCCTTCATATTC
TGTATCCCACCATAACATGCTCAGCGTAACATTGGCATCACTTGATCGCAACCTAGTTAGTGTCTATTTCAGGTCATTCA
CTTTTACAGCCTGTATAATCCTTTGTTATTGCCCATGTTATTCCTTATCAATCTACTGTCTAGTTGGCTGGCGAGTTGTT
TTACATGCTTACATCACGAATAAGATTCTGATTTGCCCTGTCTTAACAGAAAACTGAGGAGGTAATAGCAAGCACCAAGC
AGCCAGATTACAAGGAGAGAGAGCAAGTCTTGCTTGATGCCAAACCCCTCTGTAAGCTGTAACTGAGTGGTCTTTCCACT
CTGCTTTGCAATT-TGAGTTTGTATCAGACGTGTGGTAGATCATGGACCAGTCCTTGCTGTTTCGCTTCCTGAGAATTGG
AATGAGAATAATGTAATTCTGCATATGGTAGCTGTTAACCTGTTGTGTGAACGTTTTTTGCCTAGCTCCCTGGAACATTG
CTTCATATGCCGACTTGTTTTTATTG-------CCA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr3D_1071
CGCCGGCCCCGGCGCT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------GCCGCCGGTGCGGCTCGCGGCGGGGCAGGCGGCGA---------CGATCCAGCCCTCCTCC
CCGCGCTACTTCTTCTCCTCGCTCGCCGGCAAGGACGCCTCCTCC------CACCGCCGCATCGCCATCGCCGTCGACCT
CTCCGACGAGTCCGCCTTCGCCGTGCGGTGGGCCGTGCAGAACTACCTGCGGCCCGGCGACGCCGTCGTGCTCCTCCACG
TGCGCCCCACCTCCGTCCT----------------------CTACGGCGCCGACTGGGGCTCCATCCCCGTCTCCGT---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------CTCCGACGACGA
CGCGGACGACGCCGCCGTCGCCGCCGCCGCCGAGGGCTCCGAGCCCCACGCCGCCTCCTCCGCGGAGGAGCTGCAG---A
AGAAGCGGGAGGAGGACTTCGACGCCTTCACCTCCACCAAGTCGCAGGACCTGGCGCAGCCGCTCGTCGCCGCGCAGATC
CCCTTTAAGATCCACGTCGTCAAGGACCACGACATGAAGGAGCGCCTCTGCCTCGAGGCCGAGCGCCTTGGCCTGTCCGC
CATGATCATGGGAAGCCGCGGATTCGGGGCCTCGCGCAAGGGCGGCAAGGGGAGGCTCGGGAGTGTTAGTGATTACTGTG
TGCATCACTGTGTCTGCCCGGTTGTGGTTGTTCGCTACCCAGATGACGC-------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr3A_1071
CGCCGGCCCCGGCGCT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------GCCGCCGGTGCGGCTCGCGGCGGGGCAGGCGGCCA---------CGATCCAGCCCTCCTCC
CCGCGCTACTTCTTCTCCTCGCTGGCCGGCAAGGACGCCTCCTCC------CACCGCCGCATCGCCATCGCCGTCGACCT
CTCCGACGAGTCCGCCTTCGCCGTGCGGTGGGCCGTGCAGAACTACCTGCGCCCCGGCGACGCCGTCGTGCTCCTCCACG
TCCGCCCCACCTCCGTCCT----------------------CTACGGCGCCGACTGGGGATCCATCCCCGTCTCCGT---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------CTCCGACGACGA
CGCGGACGATGCCGCCGTCGCCGCCGCCGCCGAGGGCTCCGACCCC---GCCGCCGCCTCCGCGGAGGAGCTGCAG---A
AGAAGCGGGAGGAGGACTTCGACGCCTTCACCTCCACCAAGTCGCAGGACCTGGCGCAGCCGCTCGTCGCCGCGCAGATC
CCCTTTAAGATCCACGTCGTCAAGGACCACGACATGAAGGAGCGCCTCTGCCTCGAGGCCGAGCGCCTTGGCCTGTCCGC
CATGATCATGGGGAGCCGCGGATTCGGGGCCTCGCGCAAGGGCGGCAAGGGGAGGCTCGGGAGTGTTAGTGATTACTGTG
TGCATCACTGTGTCTGCCCGGTTGTGGTTGTGCGCTACCCAGATGA----------------------------------
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-------------------------------------------------------------------------------
>chr3B_1071
CGCCGGCCCCGGCGCT----------------------------------------------------------------
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-------------------GCCGCCGGTGCGCCTCGCGGCGGGCCAGGCGGCCA---------CGATCCAGCCCTCCTCC
CCGCGCTACTTCTTCTCCTCGCTCGCCGGCAAGGACGCCTCCTCC------CATCGCCGCATCGCCATCGCCGTCGACCT
CTCCGACGAGTCCGCCTTCGCCGTGCGGTGGGCCGTGCAGAACTACCTGCGCCCCGGCGACGCCGTCGTGCTCCTCCACG
TGCGCCCCACCTCCGTCCT----------------------CTACGGCGCTGACTGGGGCTCCATCCCCGTCTCCGT---
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--------------------------------------------------------------------CTCCGACGACGA
CGCGGACGACGCCGCCGTCGCCGTCGCCGCCGAGGGCTCCGACCCC---GCCG---CCTCCGCGGAGGAGCTGCAG---A
AGAAGCGGGAGGAGGACTTCGACGCCTTCACGTCCACCAAGTCGCAGGACCTGGCGCAGCCGCTCGTTGCCGCGCAGATC
CCCTTTAAGATCCACGTCGTCAAGGACCACGACATGAAGGAGCGCCTCTGCCTCGAGGCCGAGCGCCTTGGCCTGTCAGC
CATGATCATGGGAAGCCGCGGATTCGGGGCCTCGCGCAAGGGCGGCAAAGGGAGGCTCGGGAGTGTTAGTGATTACTGTG
TGCATCACTGTGTCTGCCCGGTTGTGGTTGTTCGCTACCCAGATGACGC-------------------------------
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-------------------------------------------------------------------------------
>SNPs
S------S---------------------------------S-----S-----------------------S--------
---------S---------------S-----------------------------------------S-S-----S----
S----------S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS--S---------------S----------------------------------------------------
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-------------------------------------------------------------------------S------
-----S--------------------------------------------------------------------------
---------------S-SSSSSSS--------------------------------------------------------
-------S------------------------------------------------------------------------
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----S---------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
------------------------------------------------S--------S----------------------
----------------------------------S---------------------S-----------------------
--------SS-------------------------------------S--------------------------------
------------------------------------S-------------------------------S-S---------
----------------S--S-----------------------------------S------------------------
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--------------------------------------------------------------------------------
S----------SS----S--------------------------------------------------------------
-----------------------------------------S---------------------S----------------
---S--S------S-S------S-SS-SSS-S-----------------------------------S-----------S
--------------------------------------S----S------------------------------------
-------------S--------------------------------------------------------SS--------
----------------------------------------------------------S---------------------
---------------------------------S----------------------------------------------
-------S-----------------S------------------------------------S---------S-------
--------S----------------------------SSSSSSSSSSSSSSSSSSSSSS----S------S---------
------SS-SS-S-----------------------------------------------SS------------S----S
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S-------------S----------------------------S------------------------------------
--------------------------------------------------------------------------------
------S----------------------------------------------------S----------------S-S-
-------------------S-----S------------------------------------------------------
--------------------------------S-----------------------------------------------
---S----------------------------------------------------------------------------
----------------------S---------------------------------------------------------
-------------S------------------S-----------------------------------------------
--------------------S-------------------------------------------------S---------
--------------------------SSSSSSS---------------------------SS--SS-S-SS---------
-----------------------------------------SS--------------------------------S--S-
S--S------------------S-----------------------------------------------------S---
-----S----------S-------S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_351
--------------------------------------------------------------------------------
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-----------GATGGCAGGGGCTAGGTTTT-------------------------------------------------
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>reverse_2058
--------------------------------------------------------------------------------
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---------------------------------------------------------AGGGAGTGTCAGCGACTACT---
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-------------------------------------------------------------------------------
>forward_355
--------------------------------------------------------------------------------
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---------------GCAGGGGCTAGGTTTTGCTA---------------------------------------------
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-------------------------------------------------------------------------------
>reverse_2884
--------------------------------------------------------------------------------
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---AGGAAGGAGACTGGCTATGC---------------------------------------------------------
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-------------------------------------------------------------------------------
>forward_2738
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------------------------------------------------------------------------------AC
CCGTCGCATTGTGTTAGT--------------------------------------------------------------
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>reverse_4823
--------------------------------------------------------------------------------
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----------------------AAATCTGAGCTACCACCGGC--------------------------------------
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-------------------------------------------------------------------------------
