>input_sequence_33316
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------------------------------------------ATGGATGCAATCACAG-CCCCAATG----TTTCTTTTG
TTGGATTTTTTTAGAGATGCTGCTGCTGCAGTGCTGCTGCTTTC-TTTTGTCCCAATTGGCGATGAACTGGGTGATCTCC
TACGATAGTTTCCACATTACCATATGGGCGGTTCCCACATAAGTACAGGGGTGGTCGCCACATTTACTAGCGGCGCAATC
GCCA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TATATGTGCAAAACTATAGCGCGCAGCAGGGGTGTTTTAACCAGTGGCTCTCTCT
CACGGCATTCTTTTTTTACTCTCGGTGTTTTAAAATGAACAGGGGTCTTTGAAAATGCCAAGGAGGAAGAAGAGCCGGTT
GGATCCAGTTGCAGGCGGCAGGCAGATAGCCAGTAAGGTTTGTGTTTTTC-ACTAATTTACTGCCCTTTGTTAGTTATCA
CATTGCCAGCATCATGTTGTTCACG--------------TAGCTTTTTTTTTTGCATAGCTAATTTCTTCATATCAATTG
TGGCACACATACCCCTTTTTACCACATATTTTCATATCAATTGTTGCTTTTTTCCAGTAGTACTTGCCAAAATCATACTA
CATAGTTACCAATTTTT--GCTCAGGCTCAGATTGATGGAACTGAGCAGACATCGCCACTCGCCATTTGTAAGCTCTACG
AGCACATCAACGAAGGTCAACGCGTTGCTGTCAGAGCCATGGGGACTGGGCAGCTCCTGGACATCAAGTGTGCATACTTA
CACAACACCATCCTGACATGGTTCACAAGGTTGTACCACTCAGGAAGGAGAGGGTTTGTCGTGCCAGGACGCGGGTTCAT
TCCACTGACCGAGGAGTCTGTACATCAGATTTTGGGCATCCCTCATGGAGACATTGAGGTCAAGTATGAAACCGACTATG
ACATGGAACAGGAGTTCGCAGCTACTTTGTTTCCGGGCAATGGCAGCAGGCCAAACATCACGACAGTTGCTACTGCAATC
ATTAACCATAACGAGGCTGATGATAGATTCAAGAAGTTATGGCTTATTTACATTGTCTCAACCGTGTTGGCCCCTACGAC
CAATGCACGGATCAGCAACAAGTGCTACCCCATGCTGGTAGCACACTCATCTATGAGAGATTTCATATAGCAGCAGCACC
TCTTTTGTTTGTTTTTCTCTTGCTTGCTTTGACACTTTATTTATTTATTTTTCCCTTTTTGTTTTGAAAAGGCGGATATC
AACCGGGCAGACAGGCTGAACTTGTGCAAATTTGTCGTGGACCAGCTCCACGAGCACCTCTCAAAGGGGAAATATACAAT
TGGGTGCTTACTTTACTGCATGGTGAGTGACACCCCATCCAAAATTTTCTTGGTTTTTCAAAGTAAACATACAAGTATAC
TTACTAGGCAACTATTTTTTAAGCATGTTTCTGGGTTT-TTTAATCTGGCAGCTACA-----------------------
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----------------------------AGTATTTGCTTTTCTTAGGCAACCACATAAGTATAATATCAGGCAACTATGT
GCTCCTCCATCTTGCCCAATCTGGGTTTACTAGCCATTTTGGGGTTCCGCGCATTTTTGCATGTCCCACTCTGATTTATA
TCTCTCTTTTTTTCTGTCACTTTATCTTGCA-CCCGCAGTTAAGGTACCTTGATGCTTTGGATTGTGATGGCATGGAGCT
TGAGTTAACTGACACACCATATAGAGTAAACGCATGGTCCAAGACCCAGGTTGATGTTGTCGCTGAGCTGGACATGTTAG
AGCATGATCCACCCTGTTTTGGCAAACTTCAGGTTCTTTTCACCTCATCGTCCCTCTTTTTATTTCCACACAACATTAAT
GACAATAAGTTCATTTTACAATAGTAGGAGTATTTCCTGAGAATCAACCTCTCTCATGGAGGATCAACCCTTTTTTTGAT
CTTCTTTTTTCAAACATGTACATGCAGCTAAAGGAAGAATTCAGAGAGGAGGCTGCTAGTGGATCAGGCACAAGCATATT
GAGTCTGTTCGGAGGCCCTGGTGGCTTCGAAACCTGGATGAAGCAAAACACCCACCCAAGTTGTTCTGAAAATGTAAAAA
CAAGAATCCTTTTTTTTTCTTTTTCTTTGACAAGGATGTGTCCTCTACCCTG------TATCACCTTTTCCCACACCCAA
ACCTCACCCCAAAATGCTGTGATAATGCTTTTTACTGTTTTTTTT-CTGCAGAACAAGCTTAAAGTACAGGGGATCATCC
ACAAGTTTGCATCAGGGTTGGAGACTCTCCTTGGTGATCTCGTACAGGGGATGACAGCCCCAACAGCAAGTAATTCAACC
AAAAGTAGGAGGGGCAGGCGCAACGAAATAGAAAAAAATGATGATACGTTGTTTGAAGATTCGTCATCATCAGAATCTGA
CGGCGACACGGATGGGGACGATGATACGTCGTTTGCGTCATCTTCAGAATCCGTAGTGCTAGCAGAATGA----------
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----------
>chr6A_1_TraesCS6A01G040600
TGTGAAAAGATTAGCTATATGGAACCTGTAATATTTTGATCTTGTCTATAAATCTGTTGGATTGTCTAATAATCACCATT
TTTTGAGGTCTTTAGCTTGATGCTCTTTGAGACCTGTAATTAATCTTTTGATCTCATCATTTTACTAGATGTGGAAAGAT
TGGA------------------TTTTGTTATTTTACTGTACTGTGTAGACAGAGTTGTAA--------------------
----------GTGTGCTGATTTTTGTTTCCGCAAAAAAAGGTGCACTGATTTTTAGGTCACACTATATCCAACCGGTCAG
TGAGGCCTCAAATTTCTGATGAAATGGGCTGGCCCATGGCCTGATATATTGACCTTGGGCCACGGGGGCAGGTCCAAGGC
CTAGGCCTTTTTTATTTCTTTGCCTGAGCGGCGCTGCGTGTCGTCTTCCTCCATTTCCTTTCCTCAACTTCGTCTAAAAA
AAAATCCATTCCTCAACTGCATCGGGGCTCACTT-------------GGCGGAGGCGGCGACCCCTTCCAGATCCGCTCC
GACGCCGGCGTGCAGGCAACTCCGGTGAGTCCACTTGACGCAGTGTACCTCGCGCAG-TTTTTTTCCTCTCTCTCTCTCT
CTCTCGCGGGACGGTGGTTGGGCGGGGGCGCAATCGGCGGTTTGCAGAGAGGAACTAAATCCGTCGGGCGACAGCGGCAA
AAGACGCGAGATGTGGCCGCCGGTGGAGGATGAGGATTACTCCTTCCTCTCGACGGCCTGTCCACCCCGACCTCCTGCCT
CGCCCGGTCCATAGAGGCCGCCGCCAGCGCGCGGAGGTGGCGGGCGGTGAGCAGAGTCTGAAACTCGTGCTCAAAAGTTC
CTCGTCTCCCAGAGTATGGTCT----------GAGAAACTCTGAATAAGTTGAATCCGTGGAATTGATTTTCAAA-CATG
ATGTTCCACCATCTAACAGTGGCATACAGCTTAAATTGAACTGCGAGTTTTTTTATTATTATTGTAGGGATGCTGCTGCT
G---------TGTTTTATTTTCTTTTTCTCTTGATTGATGAAATGGATGCAATCACAG-CCCCAATG----TTTCTTTTG
TTGGATTTTTTTAGAGATGCTGCTGCTGCAGTGCTGCTGCTTTC-TTTTGTCCCAATTGGCGATGAACTGGGTGATCTCC
TACGATAGTTTCCACATTACCATATGGGCGGTTCCCACATAAGTACAGGGGTGGTCGCCACATTTACTAGCGGCGCAATC
GCCA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TATATGTGCAAAACTATAGCGCGCAGCAGGGGTGTTTTAACCAGTGGCTCTCTCT
CACGGCATTCTTTTTTTACTCTCGGTGTTTTAAAATGAACAGGGGTCTTTGAAAATGCCAAGGAGGAAGAAGAGCCGGTT
GGATCCAGTTGCAGGCGGCAGGCAGATAGCCAGTAAGGTTTGTGTTTTTC-ACTAATTTACTGCCCTTTGTTAGTTATCA
CATTGCCAGCATCATGTTGTTCACG--------------TAGCTTTTTTTTTTGCATAGCTAATTTCTTCATATCAATTG
TGGCACACATACCCCTTTTTACCACATATTTTCATATCAATTGTTGCTTTTTTCCAGTAGTACTTGCCAAAATCATACTA
CATAGTTACCAATTTTT--GCTCAGGCTCAGATTGATGGAACTGAGCAGACATCGCCACTCGCCATTTGTAAGCTCTACG
AGCACATCAACGAAGGTCAACGCGTTGCTGTCAGAGCCATGGGGACTGGGCAGCTCCTGGACATCAAGTGTGCATACTTA
CACAACACCATCCTGACATGGTTCACAAGGTTGTACCACTCAGGAAGGAGAGGGTTTGTCGTGCCAGGACGCGGGTTCAT
TCCACTGACCGAGGAGTCTGTACATCAGATTTTGGGCATCCCTCATGGAGACATTGAGGTCAAGTATGAAACCGACTATG
ACATGGAACAGGAGTTCGCAGCTACTTTGTTTCCGGGCAATGGCAGCAGGCCAAACATCACGACAGTTGCTACTGCAATC
ATTAACCATAACGAGGCTGATGATAGATTCAAGAAGTTATGGCTTATTTACATTGTCTCAACCGTGTTGGCCCCTACGAC
CAATGCACGGATCAGCAACAAGTGCTACCCCATGCTGGTAGCACACTCATCTATGAGAGATTTCATATAGCAGCAGCACC
TCTTTTGTTTGTTTTTCTCTTGCTTGCTTTGACACTTTATTTATTTATTTTTCCCTTTTTGTTTTGAAAAGGCGGATATC
AACCGGGCAGACAGGCTGAACTTGTGCAAATTTGTCGTGGACCAGCTCCACGAGCACCTCTCAAAGGGGAAATATACAAT
TGGGTGCTTACTTTACTGCATGGTGAGTGACACCCCATCCAAAATTTTCTTGGTTTTTCAAAGTAAACATACAAGTATAC
TTACTAGGCAACTATTTTTTAAGCATGTTTCTGGGTTT-TTTAATCTGGCAGCTACA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AGTATTTGCTTTTCTTAGGCAACCACATAAGTATAATATCAGGCAACTATGT
GCTCCTCCATCTTGCCCAATCTGGGTTTACTAGCCATTTTGGGGTTCCGCGCATTTTTGCATGTCCCACTCTGATTTATA
TCTCTCTTTTTTTCTGTCACTTTATCTTGCA-CCCGCAGTTAAGGTACCTTGATGCTTTGGATTGTGATGGCATGGAGCT
TGAGTTAACTGACACACCATATAGAGTAAACGCATGGTCCAAGACCCAGGTTGATGTTGTCGCTGAGCTGGACATGTTAG
AGCATGATCCACCCTGTTTTGGCAAACTTCAGGTTCTTTTCACCTCATCGTCCCTCTTTTTATTTCCACACAACATTAAT
GACAATAAGTTCATTTTACAATAGTAGGAGTATTTCCTGAGAATCAACCTCTCTCATGGAGGATCAACCCTTTTTTTGAT
CTTCTTTTTTCAAACATGTACATGCAGCTAAAGGAAGAATTCAGAGAGGAGGCTGCTAGTGGATCAGGCACAAGCATATT
GAGTCTGTTCGGAGGCCCTGGTGGCTTCGAAACCTGGATGAAGCAAAACACCCACCCAAGTTGTTCTGAAAATGTAAAAA
CAAGAATCCTTTTTTTTTCTTTTTCTTTGACAAGGATGTGTCCTCTACCCTG------TATCACCTTTTCCCACACCCAA
ACCTCACCCCAAAATGCTGTGATAATGCTTTTTACTGTTTTTTTT-CTGCAGAACAAGCTTAAAGTACAGGGGATCATCC
ACAAGTTTGCATCAGGGTTGGAGACTCTCCTTGGTGATCTCGTACAGGGGATGACAGCCCCAACAGCAAGTAATTCAACC
AAAAGTAGGAGGGGCAGGCGCAACGAAATAGAAAAAAATGATGATACGTTGTTTGAAGATTCGTCATCATCAGAATCTGA
CGGCGACACGGATGGGGACGATGATACGTCGTTTGCGTCATCTTCAGAATCCGTAGTGCTAGCAGAATGAAATATTTTCT
GGTTTACTTTGTACTGGTTGCTATATTTATTTTGATATTTTTCTCGG-------------ATCTATCAAGTGTGATGCAA
TCTGTATGT-TGTCCCCTCTTTGCTAGTGATTCATAACCAACAATACTAGAGCATTTTCAGACTTCGTTTATCAACATAG
G---------------ATTTGACATCGCTGTTCATTTGGGACATTATAATTCATAATGTTCGGTCGGAGTTATTTTCTCA
GCATTTCTT----TGTCACTCATATGTAATCGGGCCACTAGCCTATAGAGTTTCTAGATGCTGTCAGGTAGTTATGGGTC
ATC--GTTTCTACTCCCTCCTTTCCGATTTATAGGGTTTATCTTAAAATTTTAGTTTTTTCATTTTATAAGGCTCAATTT
GGTTGTTTTCCATCACATGTTCAGATTCCAAGGTGCATTAAATCATTGCATGCAAGTACTAAGAAAAAATTGACCAATGC
ATGTAATTTATGCAGGCATGCATTGCAATTAATGCATTGGTAACCATACTTTTTTGAGAAAAATAAGAGCATTAATTAGG
TGCTTTTGCAAACTACAAAAAGTATTTCATCACTCACCATCTATCTTGGTTGGTGAGAATTTTTTATTAAGCCTTGTAAA
CCGAAAAGGAGGGAGTATGATCCTAGATTCCACATTCACGCTACCTCGTACTATGAGATTTTAAGACTTCTAATGCATGG
ATGCTTAAATGAGGTGCTAAGTGCATTAAAAGAATTAGCAACTAAACTCCCCAA-------------------------C
TAAGCTCCCTCCATTTAATTAGGCATAGACTCAGATTTGTGTTTTTACCTAGGTACACCTGCTTAGTATCGTTTCTTCCT
GAAACTGCAAAGTGAGAATTGATTAGATTATTGAAAAAGGCTTGTGCTCCGATTTATATATAAAGCAACGAGCAATCATC
ATGCAACTCAACACACTCTACTCGACACCCCAACACACACACTCAAGGCATAATACATGGACGATAAGAACAGGTACACA
AAAGAGTCGT
>chr6D_1
TGTGAAAAGA-TAGCTATGTGGAACCTGTAATCTTTTGATCTTGTCTATGAATCTGTTGGATTGTCTAACAATCACCATT
TTTTTAGGTCTTTAGCTTGATGCTCTTTGAGACCTGTAAT----CTTTCGATCTCATCATTTTACTAGATGTGGAAAGAT
TAGATATGTGGAATGATTGGATTTTTGTTATTTTACTGTACTGTGTAGACAGAGTTGTAA--------------------
----------GT------------------------------GCACTGATTTTTAGGTCAGACTATATCCAACCGGTCAG
TGAGGCCTCAAATTTCTGATGAAATGGGCTGACCCATGGCCTGATATATTGACCTTGGGCCACGGGG-CAGGTCCAAGGC
CTTGGCCTTTTTATTT--TTTGCCTGAGCGGCGCTGCGTGTCGTCTTCCTCCATTTCCC---------------------
--------TTCCTCAACTGCATCGGGGCTCACCGGATTGCGAGGAAGAGCGGAGGCGGCGACCCCTTCCAGATCCGCTCC
GACGCCGGCGTGCAGGCTACTCCAGTGAGTCCACTTGACGCAGTGTACCTCGCGCAG-TTTTTTTTT----------TCT
CTCTCGCGGGACGGTGGTTGGGCGGGGACGCAATCGGCGGTTTGCAGAGAGGAACTAAATCCGTCGGGCGACAGCGGGGA
ACGACGCGAGATGTGGCCGCCGGTGGGAA-----GATTAGTCCTTCCTCTCCACGGCCTGTCCACCCCGACCTCCTGCCT
CGCCTGGTCCATAGAGGCCGCCGCCAGCGCGCCGCGGTGGCCGGCGGTGAGCAGAGTCTGAAACTCGTGTTCAAAAGTTC
CTCGTCTCCCAGAGTATGGTCT----------G--AAACTCTGAATAAGTTGAATCCGTGGAATTGATTTTCAA-GCATG
ATGTTCCACGATCT---AGTGGCATACAGCTTAAATTGAACTGCGAGCTTTTTTGTTG--ATTGTAGGGATGCTGCTGCT
GCTGCTGCTGTGTTTTATTTTCTTTTTCTGTTGATTGATGAACTGGATGTAGTCAGAG-CCCCAGTGTTCCTTTCTTTTG
TC-GATTTTTCTAGAGATGCTGCTGCTGC--CGCTTTCTTTTATGTTTTATCCCAAGTGACGATGAACTAGATGATCTCC
TACGATAGTTTCCACATTACCATATGGGCGGTTCCCACATATTTACAGGGGTGGTTGCCACATTTACTAGCGGCGCAATC
GCCTTGTATGCTGGCGCTTCTTTGCATAGAGTAGTTGACATATATGCAGTTACCACATTTACTCATTAGTGCAGTCGCCA
TATATGGCTGGTACTTTTTGCATAAACCAGTAGTCTGTGTTGTGCATCCATGCAAGCTCATTGAGATAAGCCG--CTGAA
GGCGCTGATTTTCTTTATCTTCACTTATATGTGCAAAACTATAGCGCGTAGCAGGGATGTTTTAGCCAGTGGCCCTCTAT
CACGGCGTT-TTTTCTTACTCTCCATGTTTTAAAATGAGCAGAGTTTTTTGAAAATGCCAAGGAGGAAGAAGAGCCGGCT
GGATCCAGTTGCAGGCGGCAGGCAGATAGCCAATAAGGTTCGTGTTTTTTTACTAATTTACTGCCCTTTGTTA----TCA
CATTGCCAACATCATGTTCTTCACGTGGTCAAATATCCATAGCTTTTTTTTTTGCATAGCTAATTTTTTTGTATCAATTG
TGGCACACATAACCCTTTTTACCACATTTTTTCATATCAATTGTCGCTTTTTTCCAGTAGTACTTGCCAAAATCATACTG
CATAGTTACCAATTTTTTTGCTCAGGCTCAGGTTGATGGAACTGAGCAGACATCGCCACACGCCATTTGTAAGCTCTATG
AGCACATCAACGAAGGTCAATGCGTTGCTGTCAGAGCCATGGGGACTGGACCGTTCCTGGACATCAAGTGTGCATACTTA
CACAACACCGTCGTGACATGGTTCACAAGGTTGTACCACTCAGGAAGGAGAGGGTTTGTCGTGCCAGGACATGGGTTCAT
TCCACTGACCGAGGAGTCTGTACATCAGATTTTGGGCATCCCTCATGGAGACATTGAGGTCAAGTATGAAGCCGACTATG
ATATGGAACAGGAGTTCGCAGCTACTTTGTTTCCGGGCGATGGCAGCAGGCCAAACATCACGACAGTTGCTACTGCAATC
ATCAACCATAGCGAGGCTGATGATAGATTCAAGAAGTTGTGGCTTATTTACACTGTCTCAACTCTGTTGGCCCCTACGAC
CGATGCACGGGTCAGCAACAAGTGCTACCCCATGCTGGTAACACACTCTTCCAT--GAGATTTCATATAGCAGCAGCACC
TCTTTTGTTTGTTTTTCTCTTGCTTGCTTTGACACTTC----------TTTTTCCTTTTTGTTTTGAGAAGGCGGATATC
AACCGGGCAGACAGGTTGAACTTGTGCAAATTTGTCGTGGACCAGCTCCACGAGCACCTCTCAAATGGGAAGTACACAAA
TGGGTGCTTACTTTACTGCATGGTGAGTGACACCCCATCCAAAATTTTCTTGGTTTTTCAAAGCAAACATACAGGTATAC
TTACTAGGCAACTATTTTTTAAGCATGTTTCTGGGTTT-TTTAATCTGGCAGCTACA-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AGTATTTGCTTTTCTTAGGCAACCACATAAGTATAATATCAGGCAACTATGT
GCTCCTCCATCTTGCCCAATCTGTGTTTATTAGCCATTTTGGTGTTCCGCGTATTT-TGCATGTCCCACTCTCTTA-TTA
TATCTCGTTTTTTCTGTCTGTTAATCTTGTA-CCA-CAGCTAAGGTACCTCGATGCTTTGGATTGTGATGGCATGGAGCT
TGAGTTAACTAACACACCATATAGAGTAAACGCATGGTCCAAGACCCAGGTTGATATTGTCGCTGAGCTGGACATGTTAG
AGCATGATCCACCCTGTTTTGGCAAATTTCAGGTTCTTTTCACCACCTCCTCCCTCTTTTTTTC-CCACACAGCATTACT
GACAATAGGTTCATTTTAGAATAGTAC------TTCCAGAGAATCAACCTCTCTCATGGAGGATCAACC-TTTTTTTGAT
CTCTTTTTTTCAAACATGTACATGCAGCTAAAGGAAGAATTCAGAGAGGAGGCTGCTAGTGGATCGGGCACAAGCACATT
GGGTCTGTTCGGAGGCCCTGGTGGCTTCGAAACCTGGATGAAGCAAAACACCCACCCAAGTTGCTCTGAAAATGTAAAAA
CAAGAATCCTTTTTT---CTTTTTCTTTGACAAGGATGAGTTGATGTGCCATCTACCCTATCACCTTTTCTCACACCCAA
ACCTCACCCTAAATTGCTCTGATAATGCTTTTTACTGTTTTTTTT-CTGCAGGACAAGCTTAAAATACAGGGGATCATCC
ACAAGTTTGCATCAGGGTTGGAGACCCTCCTTGGTGATCTCGTACAGGGGATGACAGCCCCAACAGCAAGTAATTCAACC
AAAAGTAGGAGGGGCAGGCGCAACGAAATAGAAGAAAATGATGATACATTGTTTGAAGATTCATCATCATCAGAATCTGA
CGGTGACGCAGATGGGGACGATGATACGTCGTTTGCGTCGTCATCAGGATCCCTAGTGCTAACAGAATGAAACATTTTCT
GGTTTACTTTGTACTGGTTGCTAAATTTATTTTTATATTTTTCTCGCTACAGA---------------------------
-----------------TCTATGCTAGTGATTGATAA----CAATACTGGAGCATTTTCAGACTTTGTTTATCAACACAG
GATTACAATAATCGTCATTTAACATTGCTGTTCATTTGGGGCATTATAATACCTAATGTTTGGTCGGAGTTATTTTCTCA
ACGTGTCTTTGTCTGTCACTCATATGTAATCGGGCCATTAGCCTATAGAGTTTCTAGATGCTGTCAGGCAGTTATGGGTC
GTC--GTTTC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TATGATCCTAGATTCCACATTCACGCTACCTCGTA---TGAGATTTTAA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>chr6B_20
-------------------TGGAACCTGCACTCTTTTGATCTTGCCTATGAATCTGTTGGGTTGTCTAATAATCACCATT
TTTTAAGGTCTTTAGCTTGATGCTCTTTGAGACCTGTAAT----CATTCGATCTCATCATTTTACTAGATGTGGAAAGAT
TGGA------------------TTTTGTTATTTTACGGTACTGTGTAGACAGAGTTGTAAGTGTACTGGTATTTTTTTCG
CAAAAAAAAAGT------------------------------GCACTGATTTTTAGGTCAGACTATATCCAACCGGTCAG
CAAGGCCTCAAATTTCTGATGAAATGGGCTGACCCATGGCCTGATATA-------TGGGCCACGGGGGCAGGCCGAAGGC
-------------------------------CGCTGCGTGTCGTCTTCCTCCATTTCCC---------------------
--------TTGGTCAACTGCATCGGGGCTCACCGGATTGCGAGGAAGGGCGGAGGCGGCGACACCTTCCAGATCCGCTCC
GACGCCGGCGTGCGGGCAACTCCGGTGAGTCCACTTGACGCAGTGTACCTCGCGCAGATTTTTTTTC----------TCT
CGTGCGCGGTACGGTGGTTGGGCGGGGGCGCAATCGGCGGTTTGCAGAGAGGAACTAAATCCGTCGCGCGACAGCGGGGA
ACGACGCGAGATGTGGCCGCCGGTGGAGGATGAGGATTACTCCTTCCTCTCGACGGCCTGTCCACCCCGACCTCCTGCCT
CGCCTGGTCCATAGAGGCCGCCGCCAGCGCGCGGAGGTGGCCAGCGGCGAGCAGAGTCTGAAACTCGTGTTCAAAAGTTC
CTCGTCTCCCAGAGTATGGTCTGAGTCACTGAG--AAACTCTGAATAAGTTGAATCCGTGGAATTTATTTTCAAAGCATG
ATGTTCCACCATCT---AGTTGCATACAGCTTAAATTGAACTGCGAGCTTTTTTGTTG--ATTGTAGGGATGCTGCTGCT
G---------TGATGTATTTTCTTTTTCTGTTGATTGATGAACTGGATGCAGTCACAGCCCCCAATG----TTTCTTTTG
TC-GACTTTTTTAGAGATGCTGCTGCTGC--TGCTGCTGCTTTC-TTTTATCCCAAGTGGTGATGAACTAGATGATCTCC
TACGATAGTTTCCACATTACCATATGGGCGGTTCTCACATAAC---------------------TACAGGCGGCGCAATC
GTCATGTATGCTGGCGCTCCTTTGCATAGAGTAGTTGACATATATGCAGTTGCTACATTTACACATTAGTGCAGTTGCCA
TATATGGCTGCTGCTTTTTGCATAAAGCAGTAGTCTGTGCTGTGCATCCATGCAAGGTCAATCAGAGAAGCCCCACTGAA
GGCGCTAATTTTCTTTATCTTCAATTATATGTGCAAAACTATAGAGCGTAGCAGGGATGTTTTAACCAGTGGCCCTCTCT
CGCGTCATTCTTTTAATACTCTCCGTGTTTTAAAATGAACAGGGGTTTTTGAAAATGCCGAGGAGGAAGAAGAGCCGGTT
GGATCCAGTTGCAGGCGGCAGGCAGATAGCCAGTAAGGTTTGTGTTTTTC-ACTAATTTACTGCCCTTTGTTAGTCATCA
CATTGCCAACATCATGTTGTTCATGTAGCAT------------TTTTTTTTTTGCATAGCTAATTTCTTCTTATCAATTG
CGGCACACATACCCCTTTTTACCACATATTTTCATATCAATTGTCGCTTTTTTCCAGTAGTACTTGCCGAAATCATACTA
CATAGTTACCAATTATTTTGCTCAGGCACAGGTTGATGGAACTAAGCAGGCATCGCCACACGCCATTTGTAAGCTCTACG
AGCACATCAACGAAGGCCAACGCGTTGCTGTCAGAGCCATGGGGACTGGGCCGCTCCTGGACATCAAGTGTGCATACTTA
CACAACACTGTCCTAACATGGTTCACAAGGTTGTACCATTCAGGAAGGAGAGGGTTTGTCGTGCCCGGACGCGGGTTCAT
TCCACTGACCGAGGAGTCTGTATATCATATTCTGGGCATCCCTCGTGGAGATATCGAGGTCAAGTATGAAGCCGACTATG
ACATGGAACAGGAGTTCGCAGCTAGTTTGTTTCCGGGCGATGGCAGCACGCCAAAGATCACGACAGTTGCTACTGCAATC
ATTAACCATAACGAGGCTGATGATAGATTCAAGAAGTTATGGCTTATTTACATTGTCTCAACCGTGTTGGCCCCTACGAC
CGATGCACGGATCAGCAACAAGTGCTACCCCATGCTGGTAACACACTCTTCTATGAGAGATTTCATATAGCAGCAGCATC
TCTTTTGTTTGTTTTTCTCTTGCTTGCTTTGACACTTTATTTATTTATTTCA---TTTTTGTTTTGAAAAGGCGGATATC
AACCGGGCAGACAGGTTGAACTTGTGCAAATTTGTCGTGGACCAGCTCCACGAGCACCTCTCAAAGGGGAAGTACACAAA
TGGGTGCTTACTTTACTGCATGGTGAGTGACACCCCATCCAAAATTTTCTTGGTTTCTCAAAGTAAACATACAAGTATAC
TTACTAGGCATCTAC-TTTTAAGCATGTTTCTGGTTTTCTTTTATCTGGCAGCTACTCCCTCTGTTCCTAAATGTAAGTC
TTTGTAGAGATTCCACTATAAACCGCATACGGATGTATATAGATGCATTTTAAGTTTAGATTCATTCATTTTGCTGCGTA
TGTAGTCCACCTAGTGGAATCTCTACAAAGACTTGTATTTGGGAACGGAGGGAGTACATTTTTAGTACTCCCTCCGTCCG
GAAATACTTGTCTTCAAAATGGATAAAAGGAGATGTATCTAGACGTATTTTAGTTCTAGATACATCTCTTTTCATCTATC
TTGATGACAAGTATTTTCGGACGGAGGGAGTATTTGTTTTCCTTAGCCAACCACATAAGTATAATATCAGGCAACTATGT
GCTCCTCCATCTTGCCCAACCTGGGTTTATTAGCCATTTTGGGGTTCCGCATATTTTTGCATGTCCTACTCTCTGATTTA
TATCTTTTTTGTTCTGTCTGTTTATTTTGTACCCA-CAGCTAAGGTACCTCGATGCTTTGGATTGTGATGGCATGGAGCT
TGAGTTAACTGACACACCATATAGAGTAAACGCATGGTCCAGGACCCAGGTTGATGTTGTCGCTGAGCTGGACATGTTAG
AGCATGATCCACCCTGTTTTGGTAAACTTCAGGTTCTTTTCACCTCCTCCTCCCTCTTTTTTTTTCCACGCAGCATTAAT
GACAACAGGTTCATTTCAGAATAGTAC------TTCCGAAGAATCA-------------------AACC-TTTTTTTGAT
CTCTTTTTTTCAAACATGTACATGCAGCTAAAGGAAGAATTCAGAGAGGAGGCTGCTAGTGGATCAGGCACAAGCACATT
GG----GTTCGGAGGCCCTGGTGGCTTCGAAACCTGGATGAGGCAAAACACCCACCCAAGTTGCTCTGAAAATGTAAAAA
CAAGACTCCTTTTTT---CTTTTTCTTTGACAAGGATGAGTTGATGTGCCATCTATCCTATCACCTTTTCTCACACCCAA
ACCTCACCCTAAATTGCTCTCATAATGCCTTTTACTGTTTTTTTTTCTGCAGAACAAGCTTAAAGTACAGGGGATCATCC
ACAAGTTTGCATCAGGGTTGGAGACCCTCCTTGGTGATCTCGTACAGGGGATGACAGCCCCAACAGCAAGTAATTCAACC
AAAAGTAGGAGGGGCGGGCGCAATGAAATGGAAGAAA-TGATGATGCATTGTTTGAAGATTCGTCGTCATCAGAATCTGA
CGGTGACGGAGATGGGGACGATGATACGTCGTTTGCGTCGTCATCAGGATCCGTAGTGCTAGCAGAATGAAATATTTTCT
GGTTTACTTTGTGCTGGTTGCTAAATTTATTTTGATATTTTGTAGTGCTAGCGTGAATTTATCTATCAAGAGTCAATGCG
ATTTGCGCGCTGTCCCCTCTATGCTAGTGATTGATAACCAACAATACTGGAGCATTTTCAGACTTCGTTTATCAACACAG
GATTATAATAATCGTCGTTTGACATCGCTGTTCATTTGGGACATTATAATTCCTAATGTTCGGTCGGAGTTATTCTCTCA
GC---------------------ATGTAATCGGGCCATTAGCCTATAGAGTTTCTAGATGCTGTCAGGTAGTTATGGGTC
ATCTCGTTTC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TATGATCCTAGATTCCACGTTCACGCTACCTCGTAA---GAGATTTTAAGACATCTTCCAATGCA
TGGGAG-----------------------------TAGCAACTAAACTCCCCAATACATATGTGTTTAGTTTTTGGTTGC
TAAGCTCCCTTCATTTAATTAGGCATAGACTCAGATTTGTGTTTCTACCTAGGTATACGTGCTTAGCATCGTTTCTTCCT
GAAACTGCAAAGTAAGAATTGATTAGATTACTAAAAAAGGCTCGCGCTCCGATTTATTTATAAAGCAACGACCAATCATC
ATACAACTCAACACACTCCACTCAACACCACAACGCACACACTCAAGACATGATACATGGGTGATAAGAACAGGTACACA
AAAGAGCCGT
>SNPs
----------S-------S-------------S----------------S------------------------------
----S-----------------------------------SSSS----S-------------------------------
--------------------------------------------------------------------------------
------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------S-------------------
-------------------------------S------------------------------------------------
--S---------SS--SS----------------------------------------SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS------------------------SS----------------------------------------------
-----------------------------------------------------------------S-SSSSSSSSSS---
-----------------------------------------------------------------------------SS-
-S------------------------------------------------------------------------------
----S------------------------------------S---------------------------S----------
---------------------------------SS---------------------------------------------
--------------SSS------------------------------S------S--SSS--------------------
-----------------------------S------------S--------S----------------------------
-SS--------------------------SS------------------S------S------------S-S--------
------------------------------------------S------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------S----------------S------
--------------S--------S----------------------S---------------------------------
---------------------------------------------------------------------------S----
--------S-------------------------------------------------------------S---------
--------------------------------------------S-----------------------------------
-------------------------------S---------------------------S--------------------
---------------------------------------------------S----------------------------
---------S----------------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
-S--------------------------------------S-------S-------------------------------
----------------------------------------------------S---------------------------
---------------S-------------------------------------------------------S--S----S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S---------------------S--------------------SS-S-S--
-S----------------SS---------S----SS---S----------S-----------------------------
--------------------------------------------------------------------------------
----------------------------------------------S--S-----------S----------S-------
-------S----------S-------SSSSSSS----S-------------------------------S----------
--SS------------------------------------------------------------------------S---
-S-------------------------------------------------------------S----------------
---------------SSS--------------------S--SSSSSSS--SS------------------S---------
---------S---S----S-------------------------------------------------------------
-------------------------S------------------------------------------------------
---------------------------------S-------------S--------------------------------
---S---S-S-----------------------------S--S----S--------------------------------
-----------------------S----------------------------------------------S--S-SSSSS
SS-SSSSSS-----------S-----------S---------------S----------------------------S--
----------------------------------------------------S---------------------------
--S-S--------------------------------S------------------------------------------
----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS-----------------------------------SSS--------------S---SSSSSSSSS
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------------
----------S---------------------------------S----------S--S-------S-------------
-------------S----------------S-S---------S-S------------S-------------S--------
--S---------------S----S-----S----S------------S---S--------SS------------------
------S---
>forward_459
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------GTGTCGTCTTCCTCCATTTCCT---------------------
--------------------------------------------------------------------------------
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>reverse_1972
--------------------------------------------------------------------------------
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---------------------------------------------------AGCTCCTGGACATCAAGTGTG--------
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>forward_1489
--------------------------------------------------------------------------------
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-----------------------------TGTGCAAAACTATAGCGCGC-------------------------------
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>reverse_3150
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-----------------------------CACCCGCAGTTAAGGTACCT-------------------------------
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>forward_2199
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-------------------AGCTACTTTGTTTCCGGGCA-----------------------------------------
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>reverse_3928
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-------ACGGATGGGGACGATGATAC-----------------------------------------------------
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----------
>forward_3517
--------------------------------------------------------------------------------
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---------------------------------------------------------AGTGGATCAGGCACAAGCAT---
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>reverse_4990
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-----------------------------CCAACACACACACTCAAGGC-------------------------------
----------
