>input_sequence_33103
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----------ATGTGCTACGAGCTGGCGGACCAACGTGGACCGCACGGCAGCGGCGGCGGCCGGACGGTGAAGGGCGACG
ACGGCAGCGCCGGGGCGGCGTCGGGAATGAC---AATGGCGAGCCCGGCGGACCTCATGTCGGGCTACTACCAGGCGCAG
GAGATGTCGACGATGGTGTCGGCGCTGTCGCGGGTCGTGGCGGAGGACGACCCGTGGGCGCCGTCCGGCTCCGGCGCCGG
GCCGGAGGGGTGGGGCTGGGAGGAGCAGCAGGCAATGCACGCCGGCGCTGGCGGCGGCGGCGGCGGCGGCTACGTGCACG
AGCTGGGGAGCTTCCCG---------TCTTCAGAGTTCGCAGGTAACAAACAGTCAACACACGCATGCTATTGAAGC-TA
GCTTGGCCAGGAAGAGTTTCTGAGTCTGCATGCTCTGCTTTTGCCTTGGATTTGATATTGCTCCACCGAGCTTCTCCGCA
CGATCTGC--TTTTGCCCGATCGCATTCTTGCATGCTACTCCAGCTCGAAACGTGTCAGGCATGGGCAAAATCTCCTTT-
-TTTAGAGTGTC-------------------------------------------------TTTT-ATGCGATGCATTCA
GAGGTTCATTACTAGTATCCTAATAAGCTTGTAACATAAAGGAAATGTCTATATCCATCGGTGCAAAACAGCAAGTTAT-
--------------------------------------------------------------------------------
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----------------------------AGTAATATTCTACAAGAATATTTTAGAGGTAAAAAA-CTAATATTGGCACCC
CGGGCGTACACCATTCTTCTT-----------------------------------------------------------
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---------------------------------ATAACTTAACTTAACCAAGAAGACATTCGATGAAGTTCGAACCTTTA
CGTTTCTAGCTCTGATCAGGTCATAAAGAACCGGTGAACACGTGTACTACCAGTTTTGGTCAGTGCAGAGCCCTAGGCAC
AAAATGTGT--TACGAAAAGAGTTATTTCTTGGAAATAATAGAGGAAAATGCGTGCGGAACATGCAAGCGCGCGCGAGTG
TAACAAACT-GGTCGTACGGACGAACGGCGTGCAGCTCAAAGTCGAAACGCTGGACGGAACCGAGGCGCCTGGATTCCTC
GTAGCTGTCTAGCTGACATAAGGAAAATGAAACAAACCCTATCTCTTGTAATCCACTGCTGCACAGTTGTACGCCATTGA
ACCTAGTCTTG---TAATCCACTGCACCTCTGCAACGGAACAAAGATA-----------CAGCTAAGTCTTCAGGTAG--
-----CATTTCATCGTACATACGTATAAAATACAGTGCATCTTCGTGTCAAGTAGGA-------CATGTCAATATGTCAT
GGATGAGCTTGCGTGACGCGCATACAACAC-----CGAGAATACGGTCGAGAGACTTCATTTCTTTCCTGAAAAGGCAG-
TTTTTTCCTTCATTTTCTTCTTCTTTTG----CGACGAAAAGCGCTTCGAATTCTTGAGCTGGTGCTTATCGCTTTGCTG
GA-GCATGAATATCTTTTCT------CTACTGCCTTCCAGTTCACATTCCTAAATTTAGCCCCTCGGTGATCGGGACGGA
CGCGCTTTATTAACACCTTGCAAATCGCGTTCCGGTGCATGCACATACA----CACACTGCATGCGCGAGTGCACAACTT
GGAACACGCTTGCGCTGGCTCGCTTTGCATCCTATCTGCTTTC------GCTTTGGCGCCCCGCCCCCGTGACACC----
--------------ATATAAATATGCTTCCGCGTGCGTGCGCAGGGTCGGATCAGAGCTCGGACACCCAGAGCGC-----
----------GACCATGGAGGAACACCGCTCCCGCTCCCCGGCGTCGTCCAACGT------GGTGGAGGCGCCGCGGCGG
CGGTACCGCGGGGTGCGGCAGCGGCCGTGGGGCAAGTGGGCGGCGGAGATCCGGGACCCGCACAAGGCGGCGCGCGTCTG
GCTCGGCACCTTCGAGACGGCCGAGGCCGCGGCGCGCGCCTACGACGACGCCGCGCTGCGCTTCCGCGGCAGCCGCGCCA
AGCTCAACTTCCCCGAGGACGCGCGCCTGCACCCGGCCACCGTCGCCCCCGCCGCCGCGCCGGCCCGGGCGCCGATCGCC
GCGGCATCGGCCTCGACGCCCGCCGTGTACGCCGCCGCCGGGCCGGCCTCCGACTACCTGCGCTACCAGATGCTCCTGCA
GGGCAGGGG---CGCCGCCGCCAACCAGGGCAACCTTCTCTCGTTCTACGGCGGGGGC---GG---GGGCGGCGCCATGT
CCAGCTCGTACGGCGGCGG---CGGCGGAGTCATGAGCAGCTCTTATGGCGGCGGTGCCAGCGGCGG---------CACC
ATGAGCGGTTTCCTGGGCTCCTACTACTCGTTCCCGTCCTCCTCCGTGTCGGTGGCCACCGTGCCGTCCTCCTCCTCGGC
CTCCTCTGCGCCGGGCCACTACTACTCGTCGCCGCACGACTCG---------CAGCAGCAGCAGGGCGACGCGGCGGCGG
AGTGGAGCTGGGAGAGCGCGCTGGCGCCCTACCCGGGGACGACGGCGGCGGCCTCCTGGTCCGACTCGAGCCAGCAGCCG
TACCACCCGCCGCACACCCAATAG--------------------------------------------------------
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----------------------
>chr3D_1_TraesCS3D01G372900
CAGTGGCAACTCAACGAAACAATCCACCACCGTCGCGCGCGGTT---ACCTGAAGAAAGTTATACCACTACTACTA----
--CTAGACAGTTCGTTGGAAGGAAAACTACCCAAGGAAATGATCAAAATCGCGACGGGAAAAAGAAGAA-----AAGAAA
GGTAGCGAAATGAGATAAGCACGCTCCACATAACGAACTGCTCCTCCTCGTCGCTGACCGCGTCAACCGGCCGTCCAGGG
TGCGTGAACCACGTACGCGCTCCTCCCTCCCTCATGTCGGCGAAAGCGATCGGTACCGGAGCAAGTAGTGGAGCAGTAAG
TAAATCTGACCCAAGCCTCGGC----------------------CCTCAGATAATACAACACGAGGCTGCGTATTCGAGC
GACATCGAATGGATGGATCGGATCCAACGCTGCCGACCTATGAAACTGTGTG---TTCGATCATGCGCATTGGCGACCGT
ACGGA--CCCCCGTTCACACCGGGGACTGCCTGGAATGTACTAGTAGTAGGCTAGTAGCAGCGTAAGTGGAAGGTACGTG
AATTACCAAGAGACCTTCGTTAACTAAATTTATAATCCGAGGGGTAAAACTCGCACATTGCTTGACCGCCTCGGATCGTC
AGAGGCAGGAGGAAGCTGAAGCTTTTTCTTCAGAAAAATAAACGAGAGCAGAGGAGGGACGAGGCTACAGCTGAACTGGC
CTCTCTGCCTCCCCGTTTGAAACGAACATCTCATGACGGCTATTTCGCCACGTTTTTTCTTTCTTTC-------TCTTTC
TCCCTTTCTTGCTTGCTGATTATTATTAGTGGCACGTACGTGCTCCGCCGCTAGCCTA-GCTATATATGCGAAGGTCGCC
CCCCG-GAAATGTTCGAAGCGTTGAACGAAATTAAACGAGAGAGAGAGAGTGAGAGAGATCGTAGTAGCTCCCAGCCTCA
CGACGACTCCGCTCTGCTCTGCCATTTGAAAAGAAAGGTTCGGAGGGAGGCGCTGTTTTTTCTGCGCTGGGCGGGCGGCG
GGCGACTTTGATGTGCTACGAGCTGGCGGACCAACGTGGACCGCACGGCAGCGGCGGCGGCCGGACGGTGAAGGGCGACG
ACGGCAGCGCCGGGGCGGCGTCGGGAATGAC---AATGGCGAGCCCGGCGGACCTCATGTCGGGCTACTACCAGGCGCAG
GAGATGTCGACGATGGTGTCGGCGCTGTCGCGGGTCGTGGCGGAGGACGACCCGTGGGCGCCGTCCGGCTCCGGCGCCGG
GCCGGAGGGGTGGGGCTGGGAGGAGCAGCAGGCAATGCACGCCGGCGCTGGCGGCGGCGGCGGCGGCGGCTACGTGCACG
AGCTGGGGAGCTTCCCG---------TCTTCAGAGTTCGCAGGTAACAAACAGTCAACACACGCATGCTATTGAAGC-TA
GCTTGGCCAGGAAGAGTTTCTGAGTCTGCATGCTCTGCTTTTGCCTTGGATTTGATATTGCTCCACCGAGCTTCTCCGCA
CGATCTGC--TTTTGCCCGATCGCATTCTTGCATGCTACTCCAGCTCGAAACGTGTCAGGCATGGGCAAAATCTCCTTT-
-TTTAGAGTGTC-------------------------------------------------TTTT-ATGCGATGCATTCA
GAGGTTCATTACTAGTATCCTAATAAGCTTGTAACATAAAGGAAATGTCTATATCCATCGGTGCAAAACAGCAAGTTAT-
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----------------------------AGTAATATTCTACAAGAATATTTTAGAGGTAAAAAA-CTAATATTGGCACCC
CGGGCGTACACCATTCTTCTT-----------------------------------------------------------
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---------------------------------ATAACTTAACTTAACCAAGAAGACATTCGATGAAGTTCGAACCTTTA
CGTTTCTAGCTCTGATCAGGTCATAAAGAACCGGTGAACACGTGTACTACCAGTTTTGGTCAGTGCAGAGCCCTAGGCAC
AAAATGTGT--TACGAAAAGAGTTATTTCTTGGAAATAATAGAGGAAAATGCGTGCGGAACATGCAAGCGCGCGCGAGTG
TAACAAACT-GGTCGTACGGACGAACGGCGTGCAGCTCAAAGTCGAAACGCTGGACGGAACCGAGGCGCCTGGATTCCTC
GTAGCTGTCTAGCTGACATAAGGAAAATGAAACAAACCCTATCTCTTGTAATCCACTGCTGCACAGTTGTACGCCATTGA
ACCTAGTCTTG---TAATCCACTGCACCTCTGCAACGGAACAAAGATA-----------CAGCTAAGTCTTCAGGTAG--
-----CATTTCATCGTACATACGTATAAAATACAGTGCATCTTCGTGTCAAGTAGGA-------CATGTCAATATGTCAT
GGATGAGCTTGCGTGACGCGCATACAACAC-----CGAGAATACGGTCGAGAGACTTCATTTCTTTCCTGAAAAGGCAG-
TTTTTTCCTTCATTTTCTTCTTCTTTTG----CGACGAAAAGCGCTTCGAATTCTTGAGCTGGTGCTTATCGCTTTGCTG
GA-GCATGAATATCTTTTCT------CTACTGCCTTCCAGTTCACATTCCTAAATTTAGCCCCTCGGTGATCGGGACGGA
CGCGCTTTATTAACACCTTGCAAATCGCGTTCCGGTGCATGCACATACA----CACACTGCATGCGCGAGTGCACAACTT
GGAACACGCTTGCGCTGGCTCGCTTTGCATCCTATCTGCTTTC------GCTTTGGCGCCCCGCCCCCGTGACACC----
--------------ATATAAATATGCTTCCGCGTGCGTGCGCAGGGTCGGATCAGAGCTCGGACACCCAGAGCGC-----
----------GACCATGGAGGAACACCGCTCCCGCTCCCCGGCGTCGTCCAACGT------GGTGGAGGCGCCGCGGCGG
CGGTACCGCGGGGTGCGGCAGCGGCCGTGGGGCAAGTGGGCGGCGGAGATCCGGGACCCGCACAAGGCGGCGCGCGTCTG
GCTCGGCACCTTCGAGACGGCCGAGGCCGCGGCGCGCGCCTACGACGACGCCGCGCTGCGCTTCCGCGGCAGCCGCGCCA
AGCTCAACTTCCCCGAGGACGCGCGCCTGCACCCGGCCACCGTCGCCCCCGCCGCCGCGCCGGCCCGGGCGCCGATCGCC
GCGGCATCGGCCTCGACGCCCGCCGTGTACGCCGCCGCCGGGCCGGCCTCCGACTACCTGCGCTACCAGATGCTCCTGCA
GGGCAGGGG---CGCCGCCGCCAACCAGGGCAACCTTCTCTCGTTCTACGGCGGGGGC---GG---GGGCGGCGCCATGT
CCAGCTCGTACGGCGGCGG---CGGCGGAGTCATGAGCAGCTCTTATGGCGGCGGTGCCAGCGGCGG---------CACC
ATGAGCGGTTTCCTGGGCTCCTACTACTCGTTCCCGTCCTCCTCCGTGTCGGTGGCCACCGTGCCGTCCTCCTCCTCGGC
CTCCTCTGCGCCGGGCCACTACTACTCGTCGCCGCACGACTCG---------CAGCAGCAGCAGGGCGACGCGGCGGCGG
AGTGGAGCTGGGAGAGCGCGCTGGCGCCCTACCCGGGGACGACGGCGGCGGCCTCCTGGTCCGACTCGAGCCAGCAGCCG
TACCACCCGCCGCACACCCAATAGCGCAGCAATCGCAAAACCAAAGCCAAGGCCAAGATTCTGCGCCGTCTCTGGAAGAA
AGAATAAGTTGTGTACGGATGGCGACGGAGACGGGCGCAGCAGCAGCAAGCAGAAGATCGAGAAAAAAACAAGCAGAAGA
AGATCGAGAATGATGGCGTCACTCGCTGA------------GGGGCATGTGTTGATTGACAGCTATGGACGGTGCTCATT
TTGTTCGTTCGTTGATTATTAGTTTGGGTGGTGGGGCGGGGTCGACCCGTTGTTAGTACTTTCTGTTTTGGTTATTA---
CTGCAAATTAAGCGAAGAAATGGAGGT-----------------------TTGGATACTTCAGGGGAGGTTAAATCAGTG
TCTTTTGGGAAGCTTTAATCGTGTCGTTTGGGAAAAATAATGTTGCTGCGTAGATTTGTAGTGTGGTCTCTACTGCAAAG
CATGGCATGGATTAGCAGCTCCGATCGATTTTTATTAGGAATGTATGATGATGCTATCTTAGAAGTGTCATGTAGGATAC
ATGATGAGATGGAGGAGGAAGAACTCATACTAAGACAGACTTGTCTTCTTTTATATTTAAAAGAAAACAAGAGATGATCT
TTTAGCATAATGTCTCATCATGTTTTTAGAAATAACTACAGTAATTACTAAGAAATGATTCATTGTAGACATTTTTTTGT
TCATCTCTAAATTATATGCAAGACTTAAAATAAAATTATCTTATAATCATTGTATATGCCTTTAAAGAAACCACTGAATT
CTAGTACAATGTTTGAACAAGAAGAGATCGTACTACGATACAAACGCGATCCATTCCACGGCCGGCCGATGGAAAAAAGA
TGGTGTCATGCTCGGCCTTCATGCCATTTTTTTTTTTTTTGCATTTGTGTGTGATGCCATTATTTTCCTTCCACTGACCT
CTTTGTACAATGTTTAATTTTTTTTACGGGAAATTAGGGCGGCCTGTGCCAGCCTGAACTTATATTTGCTGGGGAGAGAT
GACGACATTCATGTAGTTACAC
>chr3B_1
CAGTGGCAACTCAACGAAACAATCCACCACCGTCGCGCGCGGCGGCAACCTGAAGAAAGTTATACCACTACTACTAGACT
GTCTAGACAGTTCGTTGGAAGGAAAACTACCCAAGGAAATGATCAAAACCGTGACGGGAAAAAAGGAGAAGAAGAAGAAA
GGAAGCGAAATCAGATAAGCACGCTCCACATAACGGACTGCTCCTCCTCACCGCTGACCGCGTCAACCGGCCGTCCAGGG
TGCGTGAACCACGAACGCGCTCCT-CCTCCCTCATGTCGGCGAAAGCGATCGGTACCGGAGCAAGTAGTGGAGCAGTAAG
TAAATCGGACCCTGGTTCTCAAAAAAAGTAAATCGGACCCCAAGCCTCAGATAATACAACACGAGGCTGTGTATTCGAGC
GACATCGAATG-------CTGATCCAATGGTGCCGACCTGCGAACTGTGTATCAATTCGATCATGCGCATTGGCCACCGT
ACAAATTCCCCCGTTCACACCGGGGACTGCTTGGAATGTACCAGTACTGGTAGCGTCGTGTGCTAAGTGGAAGCTACGTG
AATTACCAAGAGACCTTCGTTAATTCAATTTATAATCCGAGGGGTAAAACTCGCACATTGTTTCACCGCCTCGGATCGTC
AGAGGCAGGAGGAAGCTGAAGCTT-TTCTTCAGAAAAATAAACGAGAGCA---------------TAGAGCTGAACTGGC
--CTCTGCCTCCCCGTTTGAAACGAACTTCTCATGACGGCTATTTAGCCACGTTTTTTTCCCTCTCCCTTTCTTTCTTTC
TTTCTTTCTTTCTTGCTG---ATTATTAGTGGCACGTACGTAGAGCGGCTGGTGCGAGTGCTATATATGCCAAGGTCGTC
CCCCCAGAAATGTTCGAACCGTTGAACGAAATTAAACGGGAGAGAGAT--------AGATCGTACTAGCTCCCAGCCTCA
CGACGACTCTGCTCTGCTCTGCCATTTGAAAAGAAAGGAGGTGAGGCGCTG-----TTTTTCTGCGCTGGGCGGGCGGCG
GGCGACTTTGATGTGCTACGAGCTGGCGGACCAACGTGGACTGCACGGCA---GCGGCGGCCGGACGGTGAAGGGCGAG-
--GGCAGCTCCGGGGCGCCGTCGGGAATGACGACAATGGCGAGCCCGGCGGACTTCATGTCGGGCTACTACCAGGCGCAG
GAGATGTCGACGATGGTGTCGGCGCTGTCGCGGGTCGTGGCGGAGGACGACCCGTGGGCGCCGTCCGGCTCCGGCGCCGG
GGCGGAGGGGTGGGGCTGGGAGGAGCAGCAGGCAATGCACGCCGC------------CGGAGGAGGCGGCTACGTGCACG
AGCTGGGGAGCTTCCCCGGCGCGCCATCTTCAGAGTTCGCAGGTAACAAACAGTCAACACACGCATGCTATTGAAGCTTA
GCTTGGTCGGGAAGAGTTTCTGAGTTTGCATGCTCTGCTTTTGCCTTGGATTTGATATTGCTCCACCGAGCTTC---GCA
CGCTCTACTTTTTTGCCCGATCACATTTTTGCATGCTACTCCAGCTCGAAACGTGTCAGGCATGGGCAAAATCACCTTTC
CAGAGTATACATCTTATGCATTCAGAGGTTTTTTTTTTATCGGATGCATTCAGAGTTTCTTTTTT-ATCTGATGCATTCA
GCGGTTTATTACTAGTATCCTAATAAGCTTGTAAAATAAAGGAAATGTCTATATCCGTCGGTGAAGCAAACGAAGTGGCT
CACCCCCTAACGAAGAACTCATTTAGTGAAAAAATTTGTATGTTTTGGGAATCTATAATCCCTGATTTTATTTCTCACTA
TATTGTACTCCCTCTGTTCTATAATAGTATCAAACACGTTTTTGTATTATAGGATAAGGGAGTAAATGATATGTCTGTTA
TCAAAGGAATAAAATCTGTTGCTTTCAAAAACACACGCTATAGCAACTTTGTTCTACCTCTAGTACAAAGTTATACTAAG
CTTGAGACAGTTATTTTGAGACGGAGGGAGTAATATTTTACAAGAATATTTTAGAGGTAAAAAAACTAATATTGGCACCC
CGGGTGTACATCATTCGGCTTA----------------------------------------------------------
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----------------------------------TAACTTAACTTAAACAAGAAGACAATCGATGAAGTTCGAACCTTTA
CGTTTCTAGCTCTGATCAGGTCATAAAGAATCGGTGAACACGTGTAGTGCCAGTTTTGGTCAGTGCAGAGCCCTAGGCAC
AAAATGTGTTATATGAAGAGAGTTATTTCTTGGAAATAATAGAGGAAAATGCGTGCGGAACATGCAAGCGCGCGCGACCA
TAACAAACT-GGTCGTACGGAGGAACGGCGTGTAGCTCAAAGTCGAAACGTCGGACGGAACCGAGGCGCCTGGATTCCTC
G--------TAGCTGACATAAGGAAAATGAAACGAACCCTATCTCTTGTAATCCACTGCTGCACAGTTGTACGCCATTGA
ACCTAGTCTTG---TAATCCACTGCACCTCTGCAACGCAACAAAGACA-----------CAGCTAAGTCTTCAGGTAGTA
CGTAGCATTTCATCGTACATATGTATAAAATACAGTGCATCTTCGTGTCATGTACGTAGGAGTACATGCCAATATGTCAT
GGATGAGCTTGCGTGACGCGCATACAACA-----ACGAGAATACGGTCGAGAGAGTTCATTTCTTTCCTGAAAAGGCAGT
TTTTTTCCTTCATTTTTTCCTCCTTTTG----CAACGAAAAGCGGTTCGAATTCTTGAGGTGGTGCTTATCGCTTTGCTG
GAAGCATGAATATCTTTTCT------CTACTGCTTTCCAGTTCACATTCCTAAATTTAACCCCTCGGTGATCGGGACGGA
CGCGCTTTATTAACACCTTGCAAATCGCGTTCGGGTGCATGCACATACA----CACACTGCATGCGCGAGTGCACAACTT
GGAACACGCTTGCGCTGCCTCGCTTTGCATTCTCTCTGCTTTT------GCTT-GGCGCCTCGTCCCCGTGACACC----
--------------GTATAAATATGCTTCCGCGTCCGTGCGCAGGGTCGGATCAGAGCTCGGACACCCAGAGCGCGAGCG
CGAGCGCGGCGACCATGGAGGAACACCGCTCCCGCTCCCCGGCGTCGTCCAACGTGGAGGCGGCGGAGGCGCCGCGCCGG
CGGTACCGAGGGGTGCGGCAGCGGCCCTGGGGCAAGTGGGCGGCGGAGATCCGGGACCCGCACAAGGCGGCGCGCGTCTG
GCTCGGCACCTTCGAGACGGCCGAGGCCGCGGCGCGCGCCTACGACGACGCCGCGCTGCGCTTCCGCGGCAGCCGCGCCA
AGCTCAACTTCCCCGAGGACGCGCGCCTGCACCCGGCCACCGTCGCCCCCGCCGCCGCGCCGGCCCGTGTGCCGATCGCC
GCGGCGTCGGCCTCGACGCCCGGCATGTACGCCGGCGCCGGGCCGGCCTCCGACTACCTGCGCTACCAGATGCTCCTGCA
GGGCAGAGG---CGCCGCCGCCAACCAAGGCAACCTTCTCTCGTTCTACGGCGGGGGC---GGCGGCGGCGGCGGCATGT
CCAGCTCGTACGGCGGCGG---C---------ATGAGCAGCTCATATGGCGGCGG------CGGCGG---------CACC
ATGAGCGGTTTCCTGGGCTCCTACTACTCGTTCCCGACCTCCTCCGTCTCGGTGGCCACCGTCCCGTCATCCTCCTCCGC
GTCCTCTGCTCCGGGCCACTACTACTCGTCGCCGCACGACTCGCAGCAGCACCAGCAGCAGCAGGGCAACGCGGCGGCGG
AGTGGAGCTGGGAGAGCGCGCTGGCGCCCTACCCGGGGACGACGACGGCGGCCTCCTGGTCCGACTCGAGCCAGCAGCCG
TACCACCCGCCGCACACCCAATAGCGCAGCCG---------CAAAGCCAAGGCCAAGATTCTGCGCCGTCTCTGGAAGAA
AGAATAAGTTGTGTACGGAAGGCGACGGAGACGGGCGCAGCAGCAACCAG-------------------CAAGCAGAGGA
AGGTTGAGAATGATGGCGTCACTCACCGA------------GGGGCATGTGTTGATTGACAGCTATGGGC-GTGCTCATT
TTGTTCGTTCGTTGATTATTAGTTTGGGAGGTGGTGCGGGT-CGCCCCGTTTTTAGTACTTTCTGCTTTGGTTATTA---
CTGCAAATTAAAAAAAATGGAAGAGCGAGCTTGATGCTTGCAGATGGGGATTGGATACTTTTGGGGAGGTTTAATCAGAG
TCATTTGGGAAAAATAATGAATGTTACG---------------TGCTACCTGGACTTGTAGTGTGTTCT---CTGCAAAA
CATGGCATGGATTAG-----------------------------------------------------------------
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----------------------
>chr3A_1414
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------------------------------------GCTTTCGCCTCGGATTTGATATTGCTCCACCGAGCTTGT--GCA
CGCTCTGC--TTTTCCCCGATCGCATTCTTGCATGCTACTCCAGCTCGAAACGTGTCAGGCATGGGCAAAATCTCCTTTT
TTTTAGAGTATC-------------------------------------------------TTTACATGCGATGCATTCA
GAGGTTCATTACTAGTATCCTAATAAGCTTGTAAAATAAAGGAAATGTCTAAATCTATCGGTGCAAAACAACAAGTTAT-
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----------------------------AGTAATATTTTACAAGAATATTTTAGAGGTAAAAAA-CTAATATCAGCACCC
GGGGCGTACACCATTCTTCTTAGGGCATGTACAATGGTGGCATATGGATACATATGCCCCATGCCAAAAAGTAATTTGAG
GCATCTACATTTATTTTTTCTCCCCAATGCAAGCTACCACTAGTGGGCCTTAGTAAGAAATAAAAAATAAAAACTCTAAT
ATACATGCATCTCTACTTTTTACTTCAACCTTTTCAGCTTTTATCACCGGACCACACTTTTTCTCTTTAAGCACCCGCCT
CCTGAAGAGGATCCCGCTTCCCTATCCGAATCTACTTTACATCATATTCGATCCTACATGGCATGCAAGGCATCACCTTG
AGGCTATGCATTGTACATGCCCTTAATAGTAGCATAACTTAACTTAACCAATACAACAATCGATGAAGTTCGAACCTTTA
CGTTTCCAGCTCTGATCAGGTCATAAAGAATCGGTGAACACGTGTACTGCCAGTTTTGGTCAGTGCAGAGCCCTAGGCAC
AAAATGTGT--CACGAAAAGAGTTTTTTCTTGGAAACAATAGAGGAAAATGCGTGCGGGACATGCAAGCG----------
TAACAAACTGGGTCGTACGGACGAACGGCACGTAGCTCAAAGTCGAAACGCCGGACGGAACCGAGGCGCTTGGATTCCTC
GC--------AGCTGACATAAGGAAAATGGAACAAACCCTATCT----------------GCACAGTTGTACGCCATTGA
ACCCAGTCTTGTACTAATCCACTGCACCTCTGCAACGCAACAAAGATAGCACAAAGACACAGCCAAGTCTTGAGGTAG--
-----CATTTCATCGTACGTAC----AAAATACAGTGCATCGTCGTGTCGTGTG----------CATGCCAATATGTCAT
GGATGAGCTTGCGTGACGCCCAGCCCAGGCGCCGACGAGAATACGGTCGAGAGGCTTCATTTCTTTCCTGAAAAGGCAGG
ACG-TTTCTTCATTTTCTTCTTTCTTTTGCGACGACGAAAAGCGGTTCGAGTTCT-GAGCTGTTGCCTCTCGCTTTGCTG
GA-GCATGGATGTCTTTTCTCTACTGCTACTGCCTACCAGTTCACATTCCTAAAATTAACCCCTCGGCGATCGGGACGGA
CGCGCTTTATTAACACCTTGCAAATCGCGTTCGGGTGCATGCACATACTACTGCACACTGCATGCGCGAGTGCACAACTT
GGAACACGCTTGC--------GCTTTGCATTCTTTCCGCTTTTCAATTCGCTT-GGCGCCTCGTCCCCGTGAGGCCGTGA
CATCGGTGGCCTCTGTATAAATATGCTTCCGCGTGCGTGCGCAGGGCCGGACCAGAGCTCGGAC----------------
-----------ACCATGGAGGAACACCGCTCCCGCTCCCCGGCGTCGTCGAACGT------GGCGGAGGCGCCGCGCCGG
CGGTACCGCGGGGTGCGGCAGCGGCCGTGGGGCAAGTGGGCGGCGGAGATCCGGGACCCGCACAAGGCGGCGCGCGTCTG
GCTCGGCACCTTCGAGACGGCCGAGGCCGCGGCGCGCGCCTACGACGACGCAGCGCTGCGCTTCCGCGGCAGCCGCGCCA
AGCTCAACTTCCCCGAGGACGCGCGCCTGCACCCGGCCACCGTCACCCCCGCCGCCGCGCCGGCCCGGGCGCCGATCGCC
GCGCAGTCGGCCTCGACGCCCGCCATGTACGCCGGCTCCACCCAGGCCTCCGACTACCTGCGCTACCAGATGCTCCTGCA
GGGCAGGGGCGCCGCCGCCGCCAACCAAGGCAACCTTCTCTCGTTCTACGGCGGGGGCGGGGGCGGGGGCGGCGCCATGA
GCAGCTCGTATGGCGGCGGTGTC---------ATGAGCAGCTCCTATGGCGGCGG------CGGCGGCGGCGGCGGCACC
ATGAGCGGTTTCCTGGGGTCCTACTACTCGTTCCCGTCCTCCTCCGTCTCGGTGGCCACGGTGCCGTCCTCCTCCTCCGC
GTCCTCCGCTCCGGGCCACCACTACTCGTCGCCGCACGACCCGCAGCAGCACCAGCAGCAGCAGGGCGACGCGGCGGCGG
AGTGGAGCTGGGAGAGCGCGCTGGCGCCGGACCCTGGCACGACGACGGCGGCCTCCTGGTCCGACTCGAGCCAGCAGCCG
TACCACCCGCCGCACACCCAATAGCGCAGCAATCGCGAAGCCAA--------CCAAGATTCTGCGCCGTCTCTGGAAGAA
AGAATAAGATGCGTACGGACGGCGACGGAGACGGGCGCGGCAGCAGC------------------------AGCAGAGGA
AGATCGAGAATGATGGCGTCACTCGTGGTCGGGTCGGGTCGGGCGCATGTGTTGATTGAGGACAGCCATGG--GCTCGTT
TTGTTCGTTCGTTGATTA---GTTTGGGCGGTGGTGCGGGGCCGCCCCGTTTTTACTACTTTCTGTTCTGGTTATTATTA
CTGCAAATTAAGAAGAAGAAAATGGA------------------------------------------------------
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>SNPs
------------------------------------------SS------------------------------------
------------------------------------------------S--S-----------SSSSS------------
--S--------S-----------------------S-------------SS-----------------------------
-------------S----------S-------------------------------------------------------
------S-----SS-SSSSSSS-----------------------------------------------S----------
-----------SSSSSSS-S-------S-S---------SS---SSSSSSSS----------------------S-----
--SS--------------------------S----------S----S-S-SSSS--S-SSSSS----------S------
-----------------------S-S----------------------------------S--S----------------
------------------------S-------------------------SSSSSSSSSSSSSSS--S------------
SS-------------------------S-----------------S------------SSSSSS-S--------------
-SS-------S-------SSS--------------------SSSS--S-SSSS--SSS------------S-------S-
----S-------------S-------------------S--------SSSSSSSSS--------S---------------
---------S----------------------------SSSS----SSSSSSSSSS------------------------
-----------------------------------------S--------SSS-------------------------SS
SS------S--------S-----------------------------------S--------------------------
--------------------------------------------------------------------------------
-S------------------------------------------SSSSSSSSSSSSS---S--S----------------
----------------S---------------------------------------------------------------
------S-S----------------S-------------------------------------------------SS---
--S-----------------------------------------------------------------------------
---------S----------------------------------------------------------------------
----------------------------------S-----------------------------------S---------
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-------------------------------------S------------------------------------------
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----------------------------------------------------------S---------------------
------------------------------S-----------------S-------------------------------
-----------------------------------------------------------------------------SSS
--------------------------------S------------------S----------------------------
-SSSSSSSS-----------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------S---S-S-----------S-----------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
----------------------------------------------------------S---------------------
--------------------------------S-----------------------------------------------
-----------------S------------S--S--------S----------S------S--S----------------
--------------S-----------------------------------------------------------------
---------------------------------------------------------------S------------S---
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-----S------------------S---------S---------------------------------------------
---------------------------S----------------------------------------------------
-----------------------SSSSSSSSS-----------S-----------SSSSSS-------------------
-----------------------------------------------S-----------------------------S--
S--------S----------------------------------------------------------------------
--------------------------------------------S-----------------------------------
------------------------------------S--S----------------------------------------
-------------------S---------------------------S--SSSSSSSSSSSSSSSSSSS--------S--
--------------------------S-----------------------------------------S-----------
----------------------------S-----S------S--S------S----------------------------
------------SS--SS--SS---SS---------------------------------SS---------S------S-
--S--------SSS-S-SSSS---SSSSSSSSSSSSSSSSSSS----S-S-S--S----------S---SSS-------S
---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS
>forward_148
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------------------------------------------------TCGCGACGGGAAAAAGAAGA------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_2673
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CAGCTCAAAGTCGAAACGCT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>forward_341
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-AAATCTGACCCAAGCCTCGG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------
>reverse_3085
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CTTCGAATTCTTGAGCTGGTGC--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>forward_445
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------AACGCTGCCGACCTATGAAA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------
>reverse_3298
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------GCTCGCTTTGCATCCTATCTG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------
>forward_2727
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------GCCTGGATTCCTC
GTAGCTG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------
>reverse_4720
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------G
CATGGCATGGATTAGCAGC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
