>input_sequence_33063
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---------------------------------------------------------ATGCTCCTCCGGTCGCCGCCGCG
GCGCCTCCACCTGCTCCGCCCGCACCGGCTTCGCGCTCTCTCCAACGCTGCCGCCGCGGCCCTCGCGGG---CCCGCCCC
CCGCCCCGACCGAGTGGACGGAGGCGCCCGTCGCCTCGGTCCGCGCGGCCACCGCCGACGCCTCCCTCTTCCACGTCTCC
CTCGACCTCTCCGCCCACGGGCCCCTCCTCGCCTCCCACGTCGCCGCCGGCCAGTTCCTCCCCTTCCGCCTCCCCTCCGC
GCCCTACCCCATCTTCCTCGCC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ATCTCCTCCCCTCCCCCGGCCTCC---TCC
TCCGGGTCTCCTCCCAAATCGTTCGATTTCCTCGTCAAGCGCCTCCCCGGCACCCCCTCCGCGCGCCTCTGCGACCTCCG
CCCCGGCGACCTCGTCCCCGTCGGCGGCAGCGTCGTCGGCCGCGGGTTCGAGGTAAGCAGGATCGCCGACGCCCGCGACG
TCCTCGTCTTCGCCACCGGATCCGGGATCAGGTGCCTAACTGCCCCTCTGCTTCTGTACAATTCCTCACTTGTTTCTTAC
CCTCATCCATGATATTTGTCAAACCTGCGTCAATTGTATTATATAAGATGCATCACAATTGTTCAATCTTAGAGCCAATG
ATCTAGATATTTTCGATCAGAGGGCCACAGGGCCCCCATTTTCATTGCTAAGAAAATGGAGCCACGAACAGAGTAACACA
GCATTACAAAGAG--CCCAATATCGATGCAAACACACGCAACAGGGAAGGAAAGCGACCTACATTTCGGGACATCTGGAC
CACATCTAAGGAATGCAACACCGCACTACATTAGAACAGCATTCAGGCAAAACACCTACAGATCATATACAAAAACTAGA
TCACATCCAGGACAACAAAGACTTGGT-CCCAGCCATGGCAATGATCTAGATAGCACCACTGTAGTACTCCCTCCGTCCC
AAAATTCTTGTCTTAGATTTGTCTAAATGCGGATGTATCAAGTCACGCTTGAGTATTAGGTTCATCCGTATCTAGACAAA
TGTAAGACAAGAATTTTGGGACAGAGGGAGTACAATGTTTCATCAGGGTTTTTTCCATCTTTGCTTTAAATACAACGATT
GAGTTGCTTGGTAACCACATAATCTGTTT--TAGACTGCCACATTCCACGTGCCATGTGGTTGATGGGTGAT---GACCT
TCTCCTTAATTTTATTGTTCTTTCA-TTCGATTGGATGAGCATCCATGAATATTTTTATCTA-TTTTGTTGAGTTGGATT
GTTAGTACATCTCAGATTCTGCACTCTACATATATTGCATCCACACACTGATCCACCCTTGGTTTAAGCAAACGTAATTG
CCATCTCAAATTTATCAGTGATGTGGAAAGTGCATTTTGA-GAAGATAGATTTCATTGGAGTGTGTAA-GTTTGCTCATA
TTATCTTCTATTTTATATTTATGTGTGGCAGTCCAATCCGGTCACTCATTGAGTCAGGTTTTGGTGAAAGTGAGAAGATT
GATGTAAGCCTGTTTTATGGGGTGAGAAACCTTCAAAGGATGGCTTATCAGGTATATGTCAGTCTAAAGTTACATTTTAT
AAGTACAATCTTCTTTATGTAATGGCTGGAGACTCTGCTTTGACAGGAAAGGTTCAGTGACTGGGAATCGAGAGGAATAA
AAATTATACCTGTTCTCTCTAGACCAGATGATCAATGGACTGGCCAGCGAGGCTATGTTCAGGTACCGTTATCATTTTTC
CTTTTCGACTGTTCTTAGCTCACCAGGTTCCCTTATATTCTTATTCAC--TTGCATTTTCAGAATGCATTTTCAAGGGCA
AAGAAGGTTATAAATCCATCATCGACGGGAGCAATTTTGTGTGGACATAAACAGATGACTGAGGTATATATTCACATTTC
TAACTTTTGTAGCTAACGATACAGGTTGCTAAACGTTCG----TTCACGTGTCCCGATGCTTTCTGTACGTTAGATGCTT
CATGTGTTCTTTTATTTTAAACATCAATACATCAGAAACATACCCTTCTGGCAAATCCATGGTCAGTTTAAAACTTTCTC
AAGATGAAAC-----TACTTATAAAATATAGATAACAGTGTGCTATTGCCTTTTATGCGCCA-TACTGTTACTGCTCTGG
ATTTGTTTTTAATACTCTATGTTTGAGGCCACATTTATAGGCCAACAGAGTACCAGTACAAATTTGCTGCCCTGACCTAG
CAATTGGCTGTACAAACAGAGTAGGAATTAAAGACGGCTTTGAAACTGAAAC-TACATTAATGCCGACTATTGCTAA---
-----------CCATTTGCCTACTTCTGAAATTGGTGGCTTGTTTCTGCACTCATAGTCTGATCTTTCGTCTATGTTAAT
ATTTGCAGGAAATTACTAGAGCTCTTGTTGCTGATGGTATGTCCAAAGATAAAATCTTAACAAACTTCTGA---------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr3B_1_TraesCS3B01G020200
GCGCACACCCTTCCTATTAGAGCATGACAATGTTTTTTGATATCACAGTTCATTTTTTTTAATATTCTCTGGTAATTTTG
ATAAATATGAGGAAGGCAATATTTTATAAAAGGATAGCATGGCATTTGGTAGTTGTAAATTATGTTTTCTTTTGCATTTT
GGAGTATCAGAAAATATTTTTTATTTATTGTTATTTTTTGTTGTTGAAAAAACTACCTTTTGGGCCTAGCCTCTTTTCCC
CTAGGTGCTTTCACAATGGTTCGCCATCGCCACACCCCAGGGAAGGAAAATGTTCGAGCTGCACAACTAGTTATCACGGT
CCATTTCCTCTTTAGATTATGACAAAACATACATATCAAACGATTTAACCAGCTCTTCAAATATCCAACGGCAAACCCAT
ATGGTGAATGTTCCACCTAGTGTGTTCATTGTTCAATATTCAAATCCATATCATTACAATTACCGGAAACAAAATTGGTG
CAATTGCCTTTGCGATGTAGTACTCCCTCCTTCGATCCATATCAATTGTCGTTGATTCATATCAATTGTCGTTGATTCGG
CATAAAGTTGTACTCCCTCCGTAACAAAATGTAAGACGTTTCTTATGTTTTGTATAAAGGGCCATTTGCATTTCTGCCCC
TAAATCGAACCACCTACTCAGATTTGCCCCTAATTTGAAAGCATGCTCAAATTTGTCCCTCTGCCGTTAAGTCACTACTC
AGAAATGCCCTTTATAAAATTAAAAACATCTTACATTTTGTTACGGAAGTTAAATTAGTAACAATTAATGTAGATTTAAG
GGAGTGCTACTCCTTATTATTGCAAGAAAAAAGATTGCTTTCTATTTTGGGTGAAGTATAATTTCCCCTCTTGACTTGGG
-------AGAGGAGAAATCAAACATGCGCACGTGCGTATACACCCACGCCGCCTGCCTCGCGGGAGGCCACCGAGATCCG
GCAGCCTCCCCCCCTCCTCCTCCTCCCCGCATCGGCCGGCCGCC----------GCGATGCTCCTCCGGTCGCCGCCGCG
GCGCCTCCACCTGCTCCGCCCGCACCGGCTTCGCGCTCTCTCCAACGCTGCCGCCGCGGCCCTCGCGGG---CCCGCCCC
CCGCCCCGACCGAGTGGACGGAGGCGCCCGTCGCCTCGGTCCGCGCGGCCACCGCCGACGCCTCCCTCTTCCACGTCTCC
CTCGACCTCTCCGCCCACGGGCCCCTCCTCGCCTCCCACGTCGCCGCCGGCCAGTTCCTCCCCTTCCGCCTCCCCTCCGC
GCCCTACCCCATCTTCCTCGCC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ATCTCCTCCCCTCCCCCGGCCTCC---TCC
TCCGGGTCTCCTCCCAAATCGTTCGATTTCCTCGTCAAGCGCCTCCCCGGCACCCCCTCCGCGCGCCTCTGCGACCTCCG
CCCCGGCGACCTCGTCCCCGTCGGCGGCAGCGTCGTCGGCCGCGGGTTCGAGGTAAGCAGGATCGCCGACGCCCGCGACG
TCCTCGTCTTCGCCACCGGATCCGGGATCAGGTGCCTAACTGCCCCTCTGCTTCTGTACAATTCCTCACTTGTTTCTTAC
CCTCATCCATGATATTTGTCAAACCTGCGTCAATTGTATTATATAAGATGCATCACAATTGTTCAATCTTAGAGCCAATG
ATCTAGATATTTTCGATCAGAGGGCCACAGGGCCCCCATTTTCATTGCTAAGAAAATGGAGCCACGAACAGAGTAACACA
GCATTACAAAGAG--CCCAATATCGATGCAAACACACGCAACAGGGAAGGAAAGCGACCTACATTTCGGGACATCTGGAC
CACATCTAAGGAATGCAACACCGCACTACATTAGAACAGCATTCAGGCAAAACACCTACAGATCATATACAAAAACTAGA
TCACATCCAGGACAACAAAGACTTGGT-CCCAGCCATGGCAATGATCTAGATAGCACCACTGTAGTACTCCCTCCGTCCC
AAAATTCTTGTCTTAGATTTGTCTAAATGCGGATGTATCAAGTCACGCTTGAGTATTAGGTTCATCCGTATCTAGACAAA
TGTAAGACAAGAATTTTGGGACAGAGGGAGTACAATGTTTCATCAGGGTTTTTTCCATCTTTGCTTTAAATACAACGATT
GAGTTGCTTGGTAACCACATAATCTGTTT--TAGACTGCCACATTCCACGTGCCATGTGGTTGATGGGTGAT---GACCT
TCTCCTTAATTTTATTGTTCTTTCA-TTCGATTGGATGAGCATCCATGAATATTTTTATCTA-TTTTGTTGAGTTGGATT
GTTAGTACATCTCAGATTCTGCACTCTACATATATTGCATCCACACACTGATCCACCCTTGGTTTAAGCAAACGTAATTG
CCATCTCAAATTTATCAGTGATGTGGAAAGTGCATTTTGA-GAAGATAGATTTCATTGGAGTGTGTAA-GTTTGCTCATA
TTATCTTCTATTTTATATTTATGTGTGGCAGTCCAATCCGGTCACTCATTGAGTCAGGTTTTGGTGAAAGTGAGAAGATT
GATGTAAGCCTGTTTTATGGGGTGAGAAACCTTCAAAGGATGGCTTATCAGGTATATGTCAGTCTAAAGTTACATTTTAT
AAGTACAATCTTCTTTATGTAATGGCTGGAGACTCTGCTTTGACAGGAAAGGTTCAGTGACTGGGAATCGAGAGGAATAA
AAATTATACCTGTTCTCTCTAGACCAGATGATCAATGGACTGGCCAGCGAGGCTATGTTCAGGTACCGTTATCATTTTTC
CTTTTCGACTGTTCTTAGCTCACCAGGTTCCCTTATATTCTTATTCAC--TTGCATTTTCAGAATGCATTTTCAAGGGCA
AAGAAGGTTATAAATCCATCATCGACGGGAGCAATTTTGTGTGGACATAAACAGATGACTGAGGTATATATTCACATTTC
TAACTTTTGTAGCTAACGATACAGGTTGCTAAACGTTCG----TTCACGTGTCCCGATGCTTTCTGTACGTTAGATGCTT
CATGTGTTCTTTTATTTTAAACATCAATACATCAGAAACATACCCTTCTGGCAAATCCATGGTCAGTTTAAAACTTTCTC
AAGATGAAAC-----TACTTATAAAATATAGATAACAGTGTGCTATTGCCTTTTATGCGCCA-TACTGTTACTGCTCTGG
ATTTGTTTTTAATACTCTATGTTTGAGGCCACATTTATAGGCCAACAGAGTACCAGTACAAATTTGCTGCCCTGACCTAG
CAATTGGCTGTACAAACAGAGTAGGAATTAAAGACGGCTTTGAAACTGAAAC-TACATTAATGCCGACTATTGCTAA---
-----------CCATTTGCCTACTTCTGAAATTGGTGGCTTGTTTCTGCACTCATAGTCTGATCTTTCGTCTATGTTAAT
ATTTGCAGGAAATTACTAGAGCTCTTGTTGCTGATGGTATGTCCAAAGATAAAATCTTAACAAACTTCTGAGTTCCACTG
GAACACGTTTCTTGCCCTTGTAGCTGTTGTACACTTACTTACCACCACAATCTAGTGGCTCTTGTTTACAGCAAATGTTA
TGCGACTTAGGGTCGCGAAAAAGATACTGCTACATACTAACAAATAAGGGCAACTCATTTTCCTTCACGCTGCGAGTTGC
CCATCAACCATTGGATGTTGATATCCTGATATAT--TAATCTCAAGCAAGAAGAAAA-TGCTTGGTGGTACCCTGAGACA
GTATTCCCCTGGATTGGAAGGTGCCGATGCT-CTCGAAAAGCCCCCTTCCAGAATAGTAAAAGGGGACTGAATAGGGGAC
ATAGGTTGTAAGTTGGTAAAATCATTTCTTAGTTTGTATGCCTTCGGATATAATCGGCTGCAAGTGTTTGGGCCGTAAAA
TTTTGGTATATTTGAAGGTTGTAATATTTTTTGAATTGGTAAAAGGGGACTGAATAGGGGACATAGGTTGTAAGTTGGTA
AAATCATTTCTTAGTTTGTATGCCTTCGGATATAATCGGCTGCAAGTGTTTGGGCCGTAAAATTTTGGTATATTTGAAGG
TTGTAATATTTTTTGAATTGCCTGGATGTATTTGGAGCCTG-TTCTCCCAACTGGAAGTGTGCCTGGATGTATTGTGGAA
ACTGCTTTCTCAACTGACGACAAAAAGATGCATGG--AAAATGGTTTGTTCTTTGACCCAGCTGAAGTTTATCTT--CCT
GCTATATCTTGGATGTGATCAAAGAGAGTTGTGCAGGCTGCAATATGCACCATTTCACTACACTGTGCAATCCTTCTATT
-TATTCCTGGCGTGTCCGTTTACGTTGTTAAAAAAAC-TTG--TTAGGCTTGTCACTGGTGAGCAGCCAACAC-TAACAT
ATGCACCCTTTCAGGGCTTTTGAGCAAACCAGTTAA-----------ATTGTCCTGCAACATTCCAGGTGGCTTGCACCC
CAATGCTGCCTCTCTACTCCCATTATCGGGATTTCCTTTTCTTTTCAGATACATGG
>chr3A_769
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------GTTAAATTAGTGACGATTAATGTAGATTGAAG
GGAGTACTACTCATTATTATTGCAAGAAAAAAGATTGCTTTCTATTTTGGGTGAAGTATAATTTTCCCTTTTGACTT-GG
-------AGAGGAGAAATCAAACATGCGCACGTGCGTATACACCAACGCCGCCTGCCTCGCGGGAGGCCACCGAGATCCG
GCAGCTT----CCCCCCTCCTCCTCCCCGCATCGGCCGGCCGCCTCCCGCCGCCCCGATGCTCCTCCGGTCGCCGCCGCG
GCACCTCCACCTACTCCGGCCGCACCACCTGCGAGTCCTCTCCCACGCTGCCGCGGCGCTCGCGTCCCCGGCCCCGCCCC
CCGCCCCGACCGAGTGGACGGAGGCGCCCGTCGCCTCGGTGCGCGCGGCCACCGCCGACGCCTCCCTCTTCCACGTCTCC
CTCGACCTCTCCGCCCACGGGCCCCTCCTCGCCTCCCACGTCGCCGCCGGCCAGTTCCTCCCCTTCCGCCTCCCGTCCGC
CCCCTACCCCATCTTCCTCGCC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------ATCTCCTCCCCTCCCCCGGCCTCCTCGTCC
TCGGGGTCCTCGCCCAAATCGTTCGATTTCCTCGTCAAGCGCCTCCCCGGCACCCCCTCCGCGCGCCTCTGCGACCTCCG
GCCCGGTGACCTCGTTCCCGTAGGGGGCAGCGTCGTCGGCCGCGGGTTCGAGGTAACCAGGATCGCCGACGCCCGCGACG
TCCTCGTCTTCGCCACCGGATCCGGGATCAGGTGCCTTACTCCCCCTCTGCTTCTGTACAATTCTTCACTTGTTTCTTAC
G--CATCCATGATATTTGTCAAACCTGCGTCAATTGTATCATAGATA---CATCACAATTGTTCAATCTTAGAGCCAATG
ATCTAGATATTTTCGATCAAAGGGCCACACGGCCCCCATTTCCATTACTAAGAAAATGGAGTCACGAACAGAGTAACACA
GCATTACAAACAGTCCCCAACATCGATGCAAACACACGCATCAGGGAAGGAAAACGACCTACATTTCTGGACATCTGGAC
CACATCTAAGGAATGCAACACCGCACTACATTAGAACAGCAATCTGGCAAAACACCTACAGATCATATACAAAAAATAGA
TCACATCCAGGACAGCAAAGACTTGGTCCCCAGCCATGGCAATGATATAGATAGCACCACTGT-----------------
--------------------------------------------------------------------------------
----------------------------AGTACAATGTTTCATCAGGGTTTTTTCCATCTTTGCTTCAAATACAACGATT
GAGTTGCTTGGTAACAACATAATCAGTTT--CAGACTGGCACATTCCACATGCCATGTGGTTGATGGGTGAT---GACCT
TCTCCTTGATTTTATTGTTCTTTCATTTCGATTGGATGAGCATCCATGAATAGTTTTATCTATTTTTGTTGAGTTGGATT
GTTAGTACATCTCAAATTCTGCACTCTACATATATTGCATCCACACACCAATCCACC----GTTTAGGCGAACGTAATTG
CCATCTCAAATTTATCAGTGATGTGGAAAGTGCATTTTGA-GAAGATAGATTTCATTGGAGTGTGTAA-GTCTGCTCATG
TTATCTTCT-TTTTACATTTATGTGTGGCAGTCCAATCCGGTCACTCATTGAGTCAGGTTTTGGTGAAAATGAGAAGATC
GATGTAAGCCTCTTTTATGGGGTTAGAAACCTTCAAAGGATGGCTTATCAGGTATATCTCAGTCTAAAGTTACATTTTAG
AAGTACAATCTGCTTTATGTAACGGCTGGAAACTCTGCTCTGACAGGAAAGGTTCAGTGACTGGGAATCGAGAGGAATAA
AAATTATACCTGTTCTCTCTAGACCAGATGATCAGTGGACTGGCCAGCGAGGCTATGTTCAGGTACCGTTATCATTTTTC
CTTTTCGGCTGTTCTTAGCTCACCAGGTTACCTTATTCTTATTTATT---TTGCGTTTTCAGAATGCCTTTTCAAGGGCA
AAGAAGGTTATAAATCCATCATCGACGGGAGCGATTTTGTGTGGACATAAACAGATGACTGAGGTATATATTCTCATTTC
TAACTTTTGTAGCTAATGATACAGGTTGCCAAATCCATCTCCATTCACGTGTCTCAATGCTTTCTATACGTTAGATGCTG
CATGTATTGTGTTATTTTAGACATCGGTACATCAGAAACATACCCTTCTGGCAAATCCATGGTCAGTTT-AAACTTTCTC
AAGATGAAACCAAACTACTTATAAAATATAGACACCAGTGTGCCATTGTCTTTTGCAGGACATTACCGTTACTGCTCTGG
ATTTGTTGTTAATACCTTATGTTTGAGGCCACATTTATAGGCTAAGAGAGTACCAGTACAAATTTGCTGCCCAGACCTAG
CAATTGGCTGTACAAATAGAGTAAGAATTAAAGACAGCGTTGAAACTGAAACCTGCATTAATGCCGACTGTTGCTATTCT
ATAGTAGAACTCCATTT-----CTTCTAAAATTGGTGGCATCTTTGTATACTCATAG-CTGATCTTCATT-TATGATAAT
TTTTGCAGGAAATTACTAGAGCTCTTGTTGCTGATGGTATGTCCAAAGATAAAATCCTAACAAACTTCTGAGTTTCACTA
GAACACGTATCTTGCCCTTTTGGCTGTTGTACACC----TACCACCACAATCTAGTGGCTCTTGTTTACAGCAAATGTGA
TGCGACTTAGGGTCGTGAAAAAGATACTGCTACGTACTAACAAATAAGGGCAACTCATTTTCCTTCACGCTGCATGTTGC
CCATCAACCATTGGATGTTGATATCCTGATATAT--TAATCTCAAGAAAGAAGAAAA-GGCTTGGTGGTGCCCTGAGACA
GC---ATTCCCC--TGGAAGGTGCTGATGCA-CTCGAAAAGCCCCTTTCCAGAAAAGTAGAAGGGGGCTCAATAGGGGAC
ATTGGTTGTAAGTTAGTAAAATCATTTTTTAGTTTGTATGCCTTCAGATATAAGCGGCTGCAAGTGTTTCTGCCGTGAAA
TTTTGGTATATTTGAAGGTTGTAATATTTTTTG-----------------------------------------------
--------------------------------------------------------------------------------
--------------GAATTGCCTGGATGTATTTGGAGCCCTATTCTCTCAACTGGCAGTGTGCCTGGATGTATTGTGGAA
ACAGCTTTCTCCACTGACGACAAAAACAATACATGAAAAAGGGTTTTGTTCTATGACCCAACTGAATTTTATCTG----T
GCCATATCTTGGATGCGGTCAATGATAGTTGTGCAATATGA----------ATCTCACTGCGTTGTGCAATCGTTTTATT
GTATTCCTGGCGTGTTAGTTTATGTTGATCCAAAGGATTTG--TTAGCCTTGTCATAGGTGAGCAGCCAACACCTATCAT
ATGCACCCTTTCGGGGCTTTTGAGCAAACCAGTTCTACACATTCTGCATTGTCCTGCAGTATTCCAGGTGGTGTGCACCC
ACATGCTGCCTCTCTACTCCCATTA-------------------------------
>chr3D_827
--------------------------------------------------------------------------------
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--------------------------AAAAAAGATTGCTTTCTATTTTGGGCGAAGTATAATTTTCCCTCTTGACTT-GG
AATTGGAAGAGGAGAAATCAAAGATGCGCACGTGCGTATACACCCACGCCGCCTGCCTCGCGGGAGGCCCCCGAGATCCG
GCAGCTT----CCCCCCTCCTCTCCCCCGCATCGGCCGGCCGCCTCCCGCCGCCGCGATGCTCCTCCGGTCGCCGCCGCG
GCGCCTCCACCTGCTCCGGCCGCACCACCTGCGCGTCCTCTCCCACGCCGCCGCGGCGCTCGCGTCCCCGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTCCTCCCCTCCCCCTGCCTCC---TCC
TCGGCGTCTCCGCCCAGATCGTTCGACTTCCTCGTCAAGCGCCTCCCCGGCACCTCCTCCGCGCGCCTCTGCGACCTCCA
GCCCGGCGACCTCGTCCCCGTCGGCGGCAGCGTCGTCGGCCGCGGGTTCGAGGTAACCAGGATCGCCGACGCCCGCGACG
TCCTCGTCTTCGCCACCGGATCCGGGATCAGGTGCCTAACTGCCCCTCTGCTTCTGTACAATTCTTCAATTTTTTCTTAC
G--CATCCATGATATTTGTCAAACCCGCGTCAATTGTATTATATAAGATGCATCACAATTGTTCAATCTTAGAGCCAATG
ATCTAGATATTTTCGATCAAAGGGCCACAAGGCCCCCATTTTCGTTACTAAGAAGATGGAGTCATAAACAGAGTAACACA
GCATTACAAAGAG--CCCAATATCGATGCAAACACACGCAACAGGGAAGGAAAACGTCCTACATTTCCGGACATCTGGAC
CACATCTAAGGAATGCAACACCCCACTACATTAGAATAGCAATCAGTTAAAACACCTACAGACCATATACAAAAACTAGA
TCACATCCAGGACAACAAAGACTTGGTCCCCAGCCATGGCAATGATCTAGATAGCACCACTGTAGTACG-----------
--------------------------------------------------------------------------------
----------------------------------ATGTTTCATCA-GGTTTTTTCCATATTTTCTTTAAATACAACGATT
GAGTTGCTTGGTAAGCACATAATCTGTTTCATAGACTGCCACATTCCACATGCCATGTGGTTGATGGGTGATGATGACCT
TCTCCTTGATTTTGTTGTTCTTTCATTTCGATTGGATGAGCATCCATGAATAGTTTTATCTA-TTTTGTTGAGTTGGATT
GTTAGTACATCTCGAATTCTGCACTCTACATATATTGCATCCACACACTGATTCACCCTTTGTTTAAGCAAACGTAATTG
CCATCTCAAATTTATCAGTGATGTGGATAGTGCATTTTGAGGAAGATAGATTTCATTGGAGTGTGTAAAGTCTGCTCATG
TTATCTTCT-TTTTACATTTATGTGTGGCAGTCCAATCCGGTCACTCATTGAGTCAGGTTTTGGTGAAAATGAGAAGATT
GATGTAAGCCTCTTTTATGGGGTTAGAAACCTTCAAAGGATGGCTTATCAGGTATATGTCAGTCTAAAGTTACATTTTAG
AAGTACAACCTTCTTTATGTAACGGCTGGAAACTCTGCTCTGACAGGAAAGGTTCAGTGACTGGGAATCGAGAGGAATAA
AAATTATACCTGTTCTCTCTAGACCAGATGAGCAGTGGACTGGCCAGCGTGGCTATGTTCAGGTACCGTTATCATTTTTC
CTTTTCGGCTGTTCTTAGCTCACCAGGTTACCTTATATTCTTACTTATTTTTCCATTTTCAGAATGCCTTTTCAAGGGCA
AAGAAAGTTATAAATCCATCATCAACGGGAGCGATTTTGTGTGGACATAAACAGATGACTGAGGTATATGTTCTCATTTC
TAACTTTTGTAGCTAATGATACAGGTTGCCAAACCAATCTTTGTGTCTCGATT------CTTTCTGTACGTTAGATGATG
CATGTGTTCTGTTATTTAGACATCT-GTACATCAGAAACATGCCCTTCTGGCAAATCCATGGTCA---T-AAACTTTCTC
AAGATGAAAC-----TACTTATGAAATATAGACACAAGTGTGCCATCACCATTTACGGGCCA-TACTGTTACTGCCTTGG
ATTTGTTGTTAATA------------GGCCATGTTTATAGGCTAACAGAGTACCAGTACAAATTTGCTGCCCAGACCTAG
CAATTGGCTGTACAAATAGAGTAAGAATTAAAGACAGCTTTGAAACTGAAGCCTATATTAGTGCCGACTGTTGCCATTCA
AGAGTAGTACTCCATGTCTCTACTTCTAAAATTGGTGGCTTGTTTCTATATTCTTAGGCTGATCTTCATG-TACGTTAAT
ATTTGCAGGAAATTACTAGAGCTCTTGTTGCTGATGGTATGCCCAAAGATCAAATCCTAACAAACTTCTGAGTT---CTA
GGACACCTTTCTTGCCTTTCTGGCTGTTGTACACTTACTTACCACCGCAATCTAGTGGCTCTTGTTTACAGCAAATGTGA
TGCGACTTAGGGTCGCGAAAAAGATACTGCTACGTACTAACAAATAAGGGCAACTCATTTTCCTTCACGCTGTGAGTTGC
CCATCAACCATTGGATGCTGATATCCTGATATATATTAATCTCAAGCAAGAAGAAAAATGCTTGGTGGTACCCTGAGACA
GTAGTATTCCCC--TGGAAGGTGCTGATGCAACTCGAAAAGCCCCCTTCCAGAAAAGTAGAAGGGGACTCGGTAGGGGAC
ATAGGTTGTAAGTTAGTAAAATCATTTTTTAGTTTGTATGCCTTGGGATATAATCGGCTGCAAGTGTATGTGCCGTGAAA
TTTTGGTATGTTTGAAGGTTGTAATATTTTTTGAATTGCATGGGTGTATGTGTATG------------------------
--------------------------------------------------------------------------------
--------------------------TGTATGTGGAACCTG-TTCTCCCATCTGACAGTGTGCCTGAATTTA-TGTGGAA
ACTGCATTCTCGACTGACGACAAAAAGATACATGA--AAAAGGGTTTGTTCTTTGACCCAACTCAAGTTATAATCTGCCT
GCTATATCTTTGATGTGATCAAAGACAGTTGTGCAATATGCT----------TCTCACTGTGTTGTGCAACCGTTTTATT
-TGTTCCTGGTGTGTTCGTATACGCTGATGCAAAGGATTGTTATTAGCCTTGTCATAGGTGCGCAACCAACACCT-----
---CACCCTTTCAGTGCTTTTGAGCAAACCAGTTGA-----------A--------------------------------
--------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S--S-------------S---
-----S------S---------------------------------------------------S------------S--
--------------------------------------------------------------------------------
-----S-SSSS---S-----------------------------------------------------------------
------------------S-------SS--S----SS------S----------S---SS-SSSS-SSS-----------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------S-----
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S--------S--------------------------------------------------------------------
S-------------------------------------------------------S-----------------------
----------------------------------------------------------------S---------------
SSS-----------------------------------------------------------------------------
-------------------S---------S----------------S--------------S------------------
-----------------------------------------------------S-------------S------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------------------
-------------------------------------------------S------------------------------
-------S--------------------------------------------S---------------------------
--------------S---------------------------------------------S-------------------
-----------------------------------------------------------------------S-------S
---------S-----S-----------------------------------------------------S----------
-----------S-----------S-------------------------------------------------------S
----------------------S-------S--------S----------------------------------------
----------------------------------S---------------------------------------------
-------S---------------------S---------------S-S-------------------S------------
--------------------------------S----------------------------------------S------
----------------S------------S----SSSSS--------------S-S-----------------------S
----------S--------------SS------------------------------------------S----------
--------------------------------S-S--------S-----------S-S----------------------
-------S-------SS-------------------------S-----------------------------S-------
----------------S------S-----------S---------------------------------S------S---
-----------------SS--------S-------------------SS--------S--------SSS-S---------
--------------------------------------------------------S-----------------S----S
-------------------S-S--------------------------------------------------------S-
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
---S-SSS-SSSSS----------S-----S-----------------------S----S---------S----------
--------------S------------S------------------------------------------S-----S---
--------------------------------------SSSSSSS-SSSS--S--SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS-----------------------------------------S------------------------
-----------S-----------------S-----------S------------------S-------------S-----
-------------------------S---------SSS---SSSSSSSSSS--S-----S-SS---------S--S----
---------------S-----------S-SS---SSS----------S-------SS-------------------S---
----------------------------------S-----------------------SS-----------SS-------
SS-----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_654
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------TGCCCC
TAAATCGAACCACC------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>reverse_2903
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TGGCTGGAGACTCTGCTTTG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>forward_2243
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------AGTACTCCCTCCGTCCC
AAA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>reverse_3416
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TGCGCCATACTGTTACTGCT-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>forward_2288
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------GCGGATGTATCAAGTCACGC--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>reverse_4274
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------AATCGGCTGCAAGTGTTTGG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
