>input_sequence_33059
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-------------------------------------------------------------------------------A
TGACGGGGGCGGCGTCGCAGGCGTACGGGGAGGCGTGGTACTGGGACGAGCGGTACCGCAAGGAGTCGGGGCCCTTCGAC
TGGTACCAGAAGTACCCCGCCCTGGCGCCGCTGCTTCGCCTCTACGTGCGCCCGCACCAGCGCCTCCTCCTCGTCGGATG
CGGCAACTCCGGTGAGTAGCCTATCTTTGCTCCACTCGCCCATGCACCCTCGGGGCGGGATCGATCAGGGAGGGAGTTTC
TCTGGGCACCTTGGTTGACCTGCTCCAGCGTCTCTGGTTGGGATCGCCGGGAGACTATTCACTCGATCGATCAACTGGAA
TGCAATGTAGAATGTGTGCTCTACGGAGTCTTTATGTTTTTGTAGAATGAATCGAATGCTGTTAGACACAAAGGTTTCCT
CAATCAGACAGCATTTGCTCAATGGTATTCCCTCAGTGCGATTACGTGGTAACAATACAATCAAAGCAACTCGTGATGTA
GCAAGTTAATATGTTACTACTTATTACCAATCTGAGACAACCGGCCTCTCGGCCCTTTACCCCATTACCACTGAAAGCAT
ATGACAAATATGATGCGTTGCGGTTCATGGCCCCATGTCTGGCCAAAACATCATGTGCAAA-GTGACATGCGTGTATGAG
CGACG-TTGCTTTATCAGTGTCACACG-TATGTCAGCAAAAAGGTGAAATGGGGTTGTGAGACATATCCCCTAGCGACTC
CCTTCCCCAAAGCCGGACCCCTTGTAGTCAATGGATACGGAGTACGTACTAGTTAACTTAATTTAATGAACTACTGGTGA
TATGGAAATTTATGTACCACATTTCCTTTAATCAAATTTTGATAATATTTTGGTCCTAGTTGAGAGTTATTGAAGCATGA
TGGCCTCCTCGATCCATTTAGGTGCACCGTCTTGGGTTCATAAAAACTTACTGTCTGATAATTAGCACAGAATTGGCGAG
TTACACAGTCCATTCTCATCTTCTATTGTCTTCTACTTATTGTATTGACTGTTAGGCATAGATAATGACGGAATTATTCT
TATCCCTTTTGAAACTGGTTGT-TTGTTGATTGAGATATTT-TTTATCACTAATTTGCTATGCAGTTTCAGACTATATGA
TTTATTTCTGAATTTAGATGCAATTGTTATATTATTGCCAGCATGTTTATTCTTGGTTTAGTTGAAATTACTTGTTTTTA
ATCTATTTCGATGTTTCACAGTTTTTGGTGAAAACATGGTTCAGGATGGTTACCAGGACGTTGTCAACATTGATATATCG
TCTGTGGTGATTGAACAAATGAAGAAGAAATACCATGATAAGCCTCAACTAAAATGTATAATCTTTGTTCCCAACATTCA
GACATTGAATCCCTACGGAGTATCTACGGCTTACTATTGTATTATTTCCTGCAATTTACAGATACGAAGATGGATGTAAG
AAACATGTCAGACTTTGAGTCTGGTTCATTTGATGCTGTTATTGACAAAGGTATCGTTATGATGTAAATGTAATGGTTGC
CAGCATTATGGAACATCTATGCATGCGTATGTAACATGCCATTGGGTTCTAAACCATTCTGTTATTTGCAGGAACACTAG
ATTCTATTATGGTGAGTCAATTGTTGCCAGGATACTCAGATATTCTTCCCATGCCATACTCAGAGCCGTGTTTCTTGTAT
TGTAGTGCGGCCAAAATTCACAAGAGCATGCAGCGAAGATGCTAGGGGAGGTGAACAGGTAAATAATGGACTGATATTTG
TTGTGATATCTCTGTTTATTTGACTATAGCTTTCTATTTGTTTCTTCTATCTGCAGAATCCTCAACGATAAGGGGGTCTA
CATCATGGTAATTGATAGTATTATTAACATGGTAACTCTGTGGTTTTCTTCTTGTGTTTATAAACTTCTTTGAGTGTCAC
AATGCTACAGATTACTTATGGGGATCCAAGTTATCGATTGAATCTTCTGAAGGACCTCCAATTTTGGACAGTAAAGCTTC
ACGTCATAGGTTAGTGGGTTTTGCCACCGGTTCGACTTAACGACGTCCTACTCTTGACCCTTTTGATCTATTATTTTTAT
TTTCTGAAGCTCTAAATAACAGTGTTATCTGTTTTATGATTTTACATACACAATCGACATAGCAGATAGGTGGGAGAGAA
GTTCCAAAAAGACATGGGATCTGACCGAGCCACTGCCTTTACAAGATGATAGTACATCGATTATCAACCTTCTTGGCCCA
AAACCTGATGTTCACTATATTTATGTCTGTATAAAGGTTAACCGTCGACAAGCTTGTCATAATCATCCGAACTTGCTTCC
TG-AACTCTTCATATGACTAGTTATTGAATAATCTTACATTGTTATGCAGGACAACGACAGTGCAAGGGTGGACTTGAAG
GCCGAGGTCAATGAAGCAGACAAATGA-----------------------------------------------------
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>chr7A_1_TraesCS7A01G254100
GTCTCCGGTGTGACGGACAAGCTCGGAGACTAGTACCATGGAGGATGAAGGGCCGACGAGCTTCTGCTAGCCGCGACCAT
GACAACGACCATGGCTGGC-------GGGGTTGGCACAACCCTAACATGAGGAGGGTGTGCGCCTTGGTGACGATGTCCT
CCTTGTCATTGACGTCGGCCTTGTGCTGCG------C------GGCCGCCTCAGCGGCGAAGTCGGCAGCGACTTTCTTC
TCCTTCTCCCTTGTACGCTAGG-CCCCCTCTTGGCCGATCCTTGGTCGAGCTTGGCGAGCTCCGTCAGCGTGAGTTCCGA
CCGCAACTTCTTGGGACCTTTCCTCTTC---GCCGCGGGGCACCCGGTA------GCGTCCAGGTCGCCGGGATTCTTT-
GGGGCGCCGACCATGAAGGAGGGAGGGAA--GGGGGAG--TGCAGGAGGGTTTTAGGGCAAATGGAGGGAAAGTGGACGC
A-C-GTGTCCCCGTCGGACGGGCCGGGGAAGGACAAGGGTGCACGTCCCGCCCATCTGCGCCATGTCCATTTTGACGCAA
ACACGGCTCAAAGTTGAGCCGGGAATGGATCGAAACCGGACCGAAAACATGCATTTATCCGTTTGCTTTCGCATGTTGCG
CCGTGTTTTCTGTCCGTTTACCCCAAAAT-GACGGGACCGGACCATTTAGAGTCGTGCATTGGAGTTGGCTTTACGTTAT
CCAAACGGATAAAATCCGGACAAAACATATTGTCCA-TTTGGGTAGTTGCATCACCATGATTG-AAATGTTCTCCCCATC
GTCCATCGGCCATCGCACTCCGTTTCCGCACGTGCACCAGCGCACCGGGATCGCATCGCACTGCGCGAACCACTCCCAAA
GTCCCCACTGGACTCCACCCGCCCCTCCCCACCCCGCGGATCCGGAATCCTCCACGAATTAACGAGTTTCCCCTCCCCTG
CTGCCCGGCCGGCGCGCGCGGTCACCATCGTCCATCGACCGAAGCCAGTGCGCCCCCGCGGCCAGATCCGAGCGGAGGGA
TGACGGGGGCGGCGTCGCAGGCGTACGGGGAGGCGTGGTACTGGGACGAGCGGTACCGCAAGGAGTCGGGGCCCTTCGAC
TGGTACCAGAAGTACCCCGCCCTGGCGCCGCTGCTTCGCCTCTACGTGCGCCCGCACCAGCGCCTCCTCCTCGTCGGATG
CGGCAACTCCGGTGAGTAGCCTATCTTTGCTCCACTCGCCCATGCACCCTCGGGGCGGGATCGATCAGGGAGGGAGTTTC
TCTGGGCACCTTGGTTGACCTGCTCCAGCGTCTCTGGTTGGGATCGCCGGGAGACTATTCACTCGATCGATCAACTGGAA
TGCAATGTAGAATGTGTGCTCTACGGAGTCTTTATGTTTTTGTAGAATGAATCGAATGCTGTTAGACACAAAGGTTTCCT
CAATCAGACAGCATTTGCTCAATGGTATTCCCTCAGTGCGATTACGTGGTAACAATACAATCAAAGCAACTCGTGATGTA
GCAAGTTAATATGTTACTACTTATTACCAATCTGAGACAACCGGCCTCTCGGCCCTTTACCCCATTACCACTGAAAGCAT
ATGACAAATATGATGCGTTGCGGTTCATGGCCCCATGTCTGGCCAAAACATCATGTGCAAA-GTGACATGCGTGTATGAG
CGACG-TTGCTTTATCAGTGTCACACG-TATGTCAGCAAAAAGGTGAAATGGGGTTGTGAGACATATCCCCTAGCGACTC
CCTTCCCCAAAGCCGGACCCCTTGTAGTCAATGGATACGGAGTACGTACTAGTTAACTTAATTTAATGAACTACTGGTGA
TATGGAAATTTATGTACCACATTTCCTTTAATCAAATTTTGATAATATTTTGGTCCTAGTTGAGAGTTATTGAAGCATGA
TGGCCTCCTCGATCCATTTAGGTGCACCGTCTTGGGTTCATAAAAACTTACTGTCTGATAATTAGCACAGAATTGGCGAG
TTACACAGTCCATTCTCATCTTCTATTGTCTTCTACTTATTGTATTGACTGTTAGGCATAGATAATGACGGAATTATTCT
TATCCCTTTTGAAACTGGTTGT-TTGTTGATTGAGATATTT-TTTATCACTAATTTGCTATGCAGTTTCAGACTATATGA
TTTATTTCTGAATTTAGATGCAATTGTTATATTATTGCCAGCATGTTTATTCTTGGTTTAGTTGAAATTACTTGTTTTTA
ATCTATTTCGATGTTTCACAGTTTTTGGTGAAAACATGGTTCAGGATGGTTACCAGGACGTTGTCAACATTGATATATCG
TCTGTGGTGATTGAACAAATGAAGAAGAAATACCATGATAAGCCTCAACTAAAATGTATAATCTTTGTTCCCAACATTCA
GACATTGAATCCCTACGGAGTATCTACGGCTTACTATTGTATTATTTCCTGCAATTTACAGATACGAAGATGGATGTAAG
AAACATGTCAGACTTTGAGTCTGGTTCATTTGATGCTGTTATTGACAAAGGTATCGTTATGATGTAAATGTAATGGTTGC
CAGCATTATGGAACATCTATGCATGCGTATGTAACATGCCATTGGGTTCTAAACCATTCTGTTATTTGCAGGAACACTAG
ATTCTATTATGGTGAGTCAATTGTTGCCAGGATACTCAGATATTCTTCCCATGCCATACTCAGAGCCGTGTTTCTTGTAT
TGTAGTGCGGCCAAAATTCACAAGAGCATGCAGCGAAGATGCTAGGGGAGGTGAACAGGTAAATAATGGACTGATATTTG
TTGTGATATCTCTGTTTATTTGACTATAGCTTTCTATTTGTTTCTTCTATCTGCAGAATCCTCAACGATAAGGGGGTCTA
CATCATGGTAATTGATAGTATTATTAACATGGTAACTCTGTGGTTTTCTTCTTGTGTTTATAAACTTCTTTGAGTGTCAC
AATGCTACAGATTACTTATGGGGATCCAAGTTATCGATTGAATCTTCTGAAGGACCTCCAATTTTGGACAGTAAAGCTTC
ACGTCATAGGTTAGTGGGTTTTGCCACCGGTTCGACTTAACGACGTCCTACTCTTGACCCTTTTGATCTATTATTTTTAT
TTTCTGAAGCTCTAAATAACAGTGTTATCTGTTTTATGATTTTACATACACAATCGACATAGCAGATAGGTGGGAGAGAA
GTTCCAAAAAGACATGGGATCTGACCGAGCCACTGCCTTTACAAGATGATAGTACATCGATTATCAACCTTCTTGGCCCA
AAACCTGATGTTCACTATATTTATGTCTGTATAAAGGTTAACCGTCGACAAGCTTGTCATAATCATCCGAACTTGCTTCC
TG-AACTCTTCATATGACTAGTTATTGAATAATCTTACATTGTTATGCAGGACAACGACAGTGCAAGGGTGGACTTGAAG
GCCGAGGTCAATGAAGCAGACAAATGATCGCATATTATAACCTTTTTGGATCATCGTGTATAACCAGTGTAGCGAATAAT
GTAGGGAATACATTTTGTAACTCTTGACTTGTGTCGTTGTTGGCAACAATTTAGCAAAATTACAGCTA-GGATGTTGCTT
CTTCGATCATCGAATTTGGAATAGAAATGAATGTGCTGTTTTCATGTCTTTCGATCTTGTGTAGAATTTATTTCCGTGTT
CACGGAACAGAGGACCCGCTCGGAGTGTGGGAAATCTTAGAGAAAATGATCTCGGTTTTCTACATAAAGAAAAGCCAGAA
TCTTGTGGGACGGAAAAGTATCTTGGGAAAATTTGTGGATGTTCACAACATA-TGCCTAGAACCCCTAAAAAAATA-TGA
AAACAGTTTTCAAAAGTTTCGTTTTTTTTTGTTTTGGGTCTTCACAACATGTGTTTACAATTTCTTAAAACTTCAGAAGA
GAAACTTGAACTTTTTAGGAATTGTCGACACATATGTTGTGAACATTCACATTGTTCCCTGA-----TTTTTTTTGAAAC
TTCGGAATTTGACTTTTGTGA-----------------GTTGGGAGCATGGTAT-GT-----------------------
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-----------------------------------CTAAGTGTTGAAAGCACCGGATACTTTCCACTCCTGG------CC
TTTGTGGCCATTTTGGCGAACCCGCATGCAATTTTTCTTTGTTTTCAGAA-AATATAAGGGAACAACTTTTTTATTTGAC
CTAAGTGTGATTTTTTTTCTTCTGCGTCCATCATGATTCAGTTCAGGCATTCAGCCCAGGCAAAGGGA-AAGTGGAAGAA
TCCCTCAGTGGGACGGATCGACGTCCAGCTTCAATCCAACGCCTCCAGATTCGGCACGTCTCCTTCTCTTTCCCACCACC
TCCCTAAAAATCCCTCTCCCCCCTTCTCTAGCCGCCTTCCTTCGGCCCCGCAGCTTTTCTCTCTCCTCACCGTCGCGCGT
GTGCCCCTCCTTTCTGT--CTCTCTCTCCTCCGCGCGCGCTCCCTCACTCTCCTCCCATCCGTCTAATGGAGGCCCTCGC
C
>chr7D_1
GTCTCGAGCGTGACGGACGAGCTCGAGGAACGGTGCTACGAAGGACGAGCGGCCAATGAGCGTGTGCTGGCCGCGGCCAT
GGCAGCGACCGACAGGATGGCCGGTGGGGGTCGGCACAACCCTAACATGAGGAGGGTGTGCGCCTTGGAAACGATGGACT
CCTTGTCATTGACATCCGCCTGGTGCTGCGCAGCGTGCATCATGGCTGTCTCGGCGGAGTAGCTGGTAGCGGCCTTCCTC
TCCTTGTCCTTCGCCCGCCGGTTCCTCCTCATGGCTGATTCGGCGTTGAGCTTGGCGACCTCTGCCGGCGTGAGCTCCGA
CCGCGGCTTCTTGGTACCCTTCTTCTTC---GCCGTGGGCCGCGTGGCCTTGGCCG------GGTCGGCGGGATTCATC-
GGGTCGCCGGCCATGGTGGAGAGGGAGAGGTGGGAGAGGGCGCCGGAGAGTTTTGGGCAAAGTGGAGGGAAAGCGTGGGC
GGTCGTGTCCCCGACATGT-GGGTAGGGAAGGACAAGGGCGCACGTCCCGCACGTCCGTGCGCTATCTG--CGGCCGCAA
TCACGTCCCAACTTTGGGTCAAGAATGGGTCGAAAGTGGACAAAAAAGGGTGG-CGGTCCGTTTGCGGCCGCGCATTGGG
CGGCATGTTCTATCCGTTTAGCCCCAAACGGACGCGGACAGACCATTTGGTGTCGCGCGTTGGAGTTGGCCTTA------
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>chr2D_2
-TCTCGGGTGTGACAGACGAGCTCGGGGACCGGTGCTGCAGAGGACGAACTGCCGACGAGCCTGTGCTAGCCGCGACCAT
GGCAATGACCGAGGGAATGGCCGGCGGGGGTTGGCACAACCCTAACATGAGGAGGGCGTGCGCCTTGGCAACGATGGACT
CCATGTCGTTGGCGTTAGCCTGGTGCTGCGCGGCACGCCGAGTGGCCGCCTCGGCGGCATAGTCGGCCGCGGCCTTCTTC
TC-GCCACCTTTGTCCGTCGGTTCCTCCTCTTGGCCGATTCGGCGTCGAGCTTGGCGAGATCCACCGGTGTGAGCTCCGA
CCGCGGCTTCTTCGTAGCCTTATTCTTC---GGCGCGGGGCGCGCAGCC------ACGGCCGGGGCGCCGCGATTCGTC-
GGGCCACCGACAATGGAGGAGGGAGGGGA--GGGGG-G--CGCGGGAGGGTTTT-GGCGAAATGGAGGGAAAGTGGGCGC
GGC-GTGTGCCCGATGGGCGGGCCAGGGGAGAACGAGGGCGCGCGTCC--------------------------------
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>chr5A_40
---------------------------------------GGAGGACGAACGGCCGACGAGTATGTGCTAGCCACGACCAT
GGCAGCGACCGAGAGATTGGCCGGCGGGGGTCGGCACAACCCTAACATGAGGAGGGTGTGCGCCTTGGCGACCATGGACT
CCTTGTCGTCGACGTCGACCTGGTGCTGCGTGGCATGCAGCGTCGCGGCC------------TCAGCAGCGGCCTTCTTC
TCCACCACCTTTGTCCGCCGGTTCCTCCTCTTGGCCGATTCTGCGTCGAGCTTGGCGACCTCCGCTGGCGTGAGCTCCGA
CTGTGACTTCTTGGTACCCTTCTTCTTC---CCCACGCGGCGCGCGGCC------G------GATCGTCGGGATTCGTC-
AGGCCACCGACCATGGAGGAGGGAGGGGG--GGGGGAGGGGGCGCGAGGGTTTTGGGCGAAATGAAGGGAAAGTGGGCG-
GGC-GTGTCCCCGACGGGCGGGCCGGGAAAGGACAATGGTGTGCATCCCGCCCGTCCGCGCGCTGTCCGTTTTGATGCAA
GCGCCGTCGAAATTTGGGCCGGGAATGGATCGAAAGCGGACCGAAAACGAACATTGGTCTATTTGCTCCCGCGCGTTGGG
CCACCTGTTCCGTCTGTTTACCCCCAAGTGGACGCGACCGGGCCATTTGGGGTTGTGTGTTGGAGTTG------------
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>chr1A_91
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----------------ATGGCCGGCGGGGGTCGGCACAACCCTAACATGAGGAGGGTGTGCGCCTTGGAAACGATGGAGT
CCTTGTCGTCGATGTCTGCCTGGTGCTCCGCG---------------GCCTTGGCGGCATAGCCCGCAATGATCTTCTTC
TCCTTGTCCCTTGCGTGGATGTTCCTCCTCTTGGCCGCTTCAGCGTCAAGCTTGACGACCTCCGCCGGCGTGAGCTCCGA
CCGCGGCTTCTTGGTGCCCTTCTTCTTCTTCGTCGCGGGGCGCGCGGCC------GCGGCCGGGTCACCGGGATTCGTTA
GGGCCGCCGGCCATGGTGGAGGAGGAGAA------C-G--TGCGGGAGAGTTTTAGGCAAAATGAAGGGAAAGTGTGGGC
GATTGTGTCCCAGATAGGCGAGCCAGGGAAGGACAAGGGCGCGCGTCCTGCCAGTCCGCGTGCTGTCCATTCGGCCGCAA
ACGCGGCTCAACTTTGAGTAGGGAATGGGTTGAAAGCGGACCAAAAACAGACGACGGTCCGTTTGCTCTCACATGGTTAA
CTTGTTGTGCTATCCGTTTACCCTCAAACGAATGTGACCGGACCATTTAGGGTCGCACGTTGGAGTTGGC----------
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>chr6A_100
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--------------------------GGGGTCGGTACAACCCTAACATGAGGAGGGTGTGCGCCTTGGTGATGATGGACT
CCTTGTCGCTGACGTCGGACTGGTGCAGCGCGGCCAC------GGCCGCCTCGGCGATGTAGTCGGCAGCGGCCTTCTTC
TTCGCCACCTTTGTTCGTCGGTTCCTCTTCTTGGTCGATTCGGCGTCAAGCTTGGC-AGCTCCACCGATGTGAGCTCCGG
CCGCGGCTTTTTCGTAGCCTTCTTCTTC---GCCGCGGGGCGCGCGGCC------GCGGCCTGGTCGCGGGGATTC-TC-
GGGCCGCCGGCCATGGAGGAGGGAGGGGA--GGGGC-G--TGCGGGAGGGTTTTAGGCGAAGTGGAGGGAAAGTGGACG-
GGT-GTATCCCCGACGGGCGGGCCAGGGCAGGACAAGGGCGCGCGTCCTGCCTGTCCGCGCACTGTCCGTTTCGACGCAA
GCGTGGCCGACATTTGGGCCGGGAATGGGTCAAAAGCGAACCGAAAACGGACATTGATCTGTTTGTTTTCGCGCGTTGGG
CCGTATCTTCTGTCCGTTTATCTCCAAACGGATGCGGCCGGACCATTTGGGATCGCGCGTTGGAGTTG------------
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>chr7B_653
GAGTCG--------------------------------------------------------------------------
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------------------------------------------------------GTGCATTGAAGTTGCTCTTAGGCTAT
CCAAACAGACAAAATGGGAATAAAATCGCATGTCCATTTGGGGTAGTTGGATCACCATGATCGAAAATGTTCTCCCCATC
GTCCATCG-------CACTCCGTTTCCGCACGTGCACCAGCGCACCGGGATCGCATCGCACTGCGCGAACCACTCCCAAA
GTCCCCACTGGACTCCACCCGCCCCTCCCCACCCCGCGGATCCGGAATCCTCCACGAATTAACGAGTTTCCCTTCCCCTG
CTGCCCGGCCGGCGCGCGCGGTGACCATCGTCCATCGACCGAAGCCAGCGCGCCCCCGCGACCAGATCCGAGCGGAGGGA
TGACTGGGGCGGCGTCGCAGGCGTACGGGGAGGCGTGGTACTGGGACGAGCGGTACCGCAAGGAGTCGGGGCCCTTCGAC
TGGTACCAGAAGTACCCCGCCCTCGCGCCGCTGCTCCGCCTCTACGTGCGCCCGCACCAGCGCCTCCTCCTCGTCGGATG
CGGCAACTCCGGTGAGTAGCCTATCTCTGCTCCACTCGCCCATGCACCCTCGGGGCCGGATCGGTCAGGGAGGAAGTTTC
TGTGGGCAACTTGGTTGATCTGCTCCAGCGTCTCTGGTTGGGATCGCCGGGAGACTATTCACTCGATCGATCAACTGGAG
AGTAATGTAGAATGTATGCTCTACGGAGTCTCTACGTTTTTGTAGAATGACTCGAATGCTGCTAGACACAAAGGTTTCCT
CAATCACACAGCATTTGCTGAATGGTATTCCATCAGTGCGATTACGTGGTAACAATACAATCAAAGCAACTGGTGATGTA
GCAAGTCAATATCTTACGTT---TTACCAATCTGAGACAACCGGCCTCTGTGCCCTGTGCCCTGTTACCACTAAAAGCAT
ATGAAAAATATGGTGCGTTGCAGTTCATGGCCCCATGCCTGGCCAAAACATCATGTGCAAAAGTGACATGCGTGTATGGG
CGACGGTTGCTTTATCAGTATCAGATCATATGTCAGCAAAAAAGTGAAATCGGGTTGTGAGACAGATCCCCTAGCGACTC
CCTTCCCCAAAGCAGGACCCCTTGTAGTCAATGGATACGGAGTA-------GTTAACTTGATATAATGAACTACTGGTGA
TATGGAAATTTATGTGCCACATTTCCTTTAATCAAATTTTGATAATATTTTGGTCCTAGTTGAGAGTTGTTGAAGCATCA
TGGCCTCCTGGATCCATTTAGGTGCACCGTCTTGGGTTCATGAAAACTTACTATCTGATAATTAGCATGGAATTGGCGAG
TTACACAGTCCATTCTCATCTTTTACTGTCTACTACTTATTGTATTGACTGTTAGGCATAGATAATGACGGAATTACTCT
TATCCCTTTTGAAACTGGTTGTATTGTTGATTGAGATGTTTTTTTATCACTAATTTGCTATGCAGTTTCAGACTATATGA
TTTATTTCTGAATTTAGATGCAGTTGTTATATTATTGCCAGCGTGTTTATTCTTTGTTTAGTTGAAATTACTTGTTTTTA
ATCTATTTCGATGTTTCACAGTTTTTGGTGAAAACATGGTTCATGATGGTTACCAGGACGTTGTCAACATTGATATATCG
TCTGTGGTGATTGAACAAATGAAGAAGAAATACCATGATAAGCCTCAACTAAAATGTATAATCTTTGTTCCCAACATTCA
GACATTGAATCCCTGCGGAGTATCTACGGCTTACTATTGTATTATTTCCTGCAATTTACAGACACGAAGATGGATGTAAG
AAACATGTCAGACTTTGAGTCTGGTTCATTTGATGCTGTTATTGACAAAGGTATCGTTACAATGTAAATGTAATGGTTAC
CAGCATTATGGAACATCTATGCATGCGTATGTAACATGCCATTGGGTTCTAAACCATTCTGTTATTTGCAGGAACACTAG
ATTCTATTATGGTGAGTCAATTGTTGCCAGGATACTCAGATATTCTTCCCATGCCATACTCAGAGCCGTGTTTCTTGTAT
TGTAGTGCGGCCAAAATTCACAAGAGCATGCAGCAAAGATGCTAGGGGAGGTGAACAGGTAAATAATAGACTGATATTTG
TTGTGATATCTCTGTTTATTTGACTATAGCTTT-TATTTGTTTCTTCTATCTGCAGAATCCTCAACGATAAGGGGGTCTA
CATTATGGTAATTGATAGTATTATTAACATGGTAACTCTGTGGTTTTCTTCTTGTGTCTATAAACTTCTTTGAGTGTCAC
AATGCTACAGATTACTTATGGGGATCCAAGTTATCGATTGAATCTTCTGAAGGACCTCCAATTTTGGACAGTAAAGCTTC
ACGTCATAGGTTAGTGGGTTTTGCCACCG-TTCGACTTAACAATGTCCTACTCTTGACCCTATTGATCTATTTCTTTTAT
TTTCTGAAGCTCTAAATAACAGTGTTATCTGTTTTATGATTTTACATACACAATCGACATAGCAGATAGGTGGGAGAGAA
GTTCCAAAAAGACATGGGACCTGACCGAGCCACTGCCTTTACAAGATGATAGTACATCGATTATCAACCTTCTTGGCCCA
AAACCTGATGTTCACTATATTTATGTCTGTATAAAGGTTAGCCGTCGACAAGCTTGTCATAATCATCCGAACTTGCTTCT
TGAAACTCTTCATATGACTAGTTATTGAATAATCTTACATTGTTATGCAGGACAACGACAGTGCAAGAGTGGAGTTGAAG
GTCGAGATCAATGAAGCAGACAAATGATCGCATACTATAACCTTTTTGGATCATCGTGTATAACCAGTGTAGCGAATAAT
GTAGGGAATACATTTTGTAACTCTTAACTTGTGTCGTTGTTGGCAACAATTTAGCAAAATTACAGCTA-GGATGTTGCTT
CTTCGATCATTGAATTTGGAATAGAAATGGATGTGATGTTTTCCTGTCTTTCGATTTTGTGTAGAATTTATTTCCGTGTT
CACGGAACGTAGGACCCGCTCGGAGTGTGGGAAATCTTAGAGAAAATGATCTCGGTTTTCTACATAAAGAAAAGCCAGAA
TCTTGTGGGACGGGAAAGTATCTTGGA-AATTTTGTGGATGTTCACAACATA-TGCCTAGAACCCCTAAAAAAATTTTGA
AAACAGTTTTCAAAAGCTCT-TTTTTTTTTGTTTTGGGTGTTCACAACATGTGTTTACAATTTCTAAAAATTTCAAAAGA
GAAACTTGAACTTTTTAGGA-TTGTTGACACATATGTTGTGAACATTCACAATGCTCCCTGTTTTTTTTTTTTTTGAAAC
TTCTGAATTTGGCCATTTTAGGAATTGTTGACACATATGTTGGGAGCATGGTATCGT-----------------------
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-----------------------------------CTAAGTCTTGAAAGCACCGGATACTTTCCACTCCTGGGGCAAGCC
TTTGTGGCCATTTTAGCGAACCCGTATGCAATTTTCCTTTATTTTCATCAGAAAAAAAGGGAACACCTTTTTT---TGAC
CTAAGCGTGCAA-TTTTTCTTCTGCGTCCATCATGATTCAGTTCAGGCATTCAGCCCAGGCAAAGGGA-AAGTGGAAGAA
TCCCTTACTGGAACGGATCAACGTCCATCTTCAATCCAACTCCTGCAGATTCGACACGTGTCCCTCTCTTTCCCACCTCC
TCCCTAAAAATCCCTCTCCCCCCTTCTCTAGCCGCCTTCCTTCGGCCCCGCAGCA-TTCTCTCTCCTCACCGTCGCGCGT
GTGCCCCTCCTTTCTGTCCCTCTCCCTCCTCCGCGCGCGCTCCCTCACTCTCCTCCCATCCGTCTAATGGAGGCCCTCGC
C
>chr7D_662
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----------------------------------------------------------ATTGGAGTTGCTCTTACGCTAC
TCAAATGGACAAAATTCGGACAAAAACAAACGTCAGTTGCGGGCAGTCGGATCAGCATGATTGAAAATGTTCTCCCCATC
GTCTATCG-------CACTCCGTTTCCGCACGTGCACCAGCGCACCGGGATCGCATCGCACTGCGCGAACCACTCCCAAA
GTCCCCACTGGACTCCACCCG-CCCTCCCCACCCCGCGGATCCGGAATCCTCCACGAAGTAACGAGTTTCCCCTCCCCTG
CCGCCCGGCCGGCGCGCGCGGTCACCATCGTCCATCGATCGAAGCCAGTGCGCGCCCGCGACCAGATCCGAGCGGAGGGA
TGACGGGGGCGGCGTCGCAGGCGTACGGGGAGGCGTGGTACTGGGACGAGCGGTACCGCAAGGAGCCGGGGCCCTTCGAC
TGGTACCAGAAGTACCCTGCCCTCGCGCCGCTGCTCCGCCTCTACGTGCGCCCGCACCAGCGCCTCCTCCTCGTCGGATG
CGGCAACTCCGGTGAGTAACCTATCTTTGCTCCACTCGCCCATGCACCCTCGGGGCGGGATCGATCAGGGAGGGAGTTTC
TCTGGGCACCTTGGTTGACCTGCTCCAGCGTCTCTGGTTGGGATCGCCGGGAGACTATTCACTCGATCGATCAACTGGAG
TGCAATGTAGAATGTGTGCTCTACGGAGTCTTTACGTTTTTGTAGAATGAACCGAATGCTGTTAGACACAAAGGTTTCCT
CAATCGCACAGCATTTGCTCAATGGTACTCCATCAGTGCGATTACGTGGTAACAATACAATCAAAGCAACTAGTGATGTA
GCAAGTCAATATGT---TACTTATTACCAATCTGAGACAACCGGCCTCTTGGCCCTGTGCCCCATTACCACTAAAAGCAT
ATGCAAAATATGGTGCGTTGCAGTTCATGGCCCCATGCCTGGCCAAAACATCATGTGCAAAAGTGACATGCGTGTATGGG
CGACGGTTGCTTTATCAGTATCAGATCATATGTCAGCAAAAAAGTGAAATGGGGTTGTGTGACAGATCCCCTAGCGACTC
CCTTCCCCAAAGCCGGACCCCTTGTAGTCAATGGATACGGAGTAC----TAGCTAACTTGATTTAATGAACTACTGCTGA
TATGGAAATTTATGTACCACATTTCCTTTTATCAAATTTTGATAATATTTTGGTCCTAGTTGAGAGTTGTTGAAGCATCC
TGGCCTCCTGGATCCATTTAGGTGCACCGTCTTGGGTTCATGAAAACTTACTGTCTGATAATTAGCATGGAATTGGGGAG
TTACACAGTCCATTCTCATTTTTTATTGTCTACTACTTATTGTATTGACTGTTAGGCATAGATAATGACGGAATTATTCT
TATCCCTTTTGAGACTGGTTGTATTGTTGATTGAGATG--TTTTTATCACTAATTTGCTATGCAGTTTCAGACTATATGA
TTTATTTCTGAATTTAGATGCAGTGGTTATATTATTGCCAGCCTGTTTATTCTTGGTTTAGTTGGAATTATTTGTTTTTA
ATCTATTTCGATGTTTCACAGTTTTTGGTGAAAACATGGTTCAGGATGGTTACCAGGACGTTGTCAACATTGATATATCG
TCTGTGGTGATTGAACAAATGAAGAAGAAATACCATGATAAGCCTCAACTAAAATGTATAATCTTTGTTCCCACCATTCA
GACGTTGAATCCCTGCGGAGTATCTATGGCTTACTATTGTATTATTTCCTGCAATTTACAGACACGAAGATGGATGTAAG
AAACATGTCAGACTTTGAGTCTGGTTCATTTGATGCTGTTATTGACAAAGGTATTGTTACGATGTAAATGTAATGGTTGC
CAGCATTATGGAACATCTATGCATGCGTATGTAACATGCCATTGGGTTCTAAACCATTCTGTTATTTGCAGGAACACTAG
ATTCTATTATGGTGAGTCAATTGTTGCCAGGATACTCAGATATTCTTCCCATGCCATACTCAGAGCCGTGTTTCTTGTAT
TGTAGTGCGGCCAAAATTCACAAGAGCATGCAGCGAAGATGCTAGGGGAGGTGAACAGGTAAATAATAGACTGATATTTG
TTGTGATATCTCTGTTTATTTGACTATAGCTTTCTATTTGTTTCTTCTATCTGCAGAATCCTCAACGATAAGGGGGTCTA
CATTATGGTAATTGATAGTATTATTAACATGGTAACTCTGTGGTTTTCTTCTTGTGTCTATAAACTTCTTTGAGCGTCAC
AATGCTGCAGATCACTTATGGGGATCCAAGTTATCGATTGAATCTTCTGAAGGACCTCCAATTTTGGACAGTAAAGCTTC
ACGTCATAGGTTAGTGGGTTTTGCCACCGGTTTGACTTAACAATGCCCTACTCTTGACCCTTTTGATCCATTTCTTTTAT
TTTCTGAAGCTCTAAATAACAGTGTTATCTGTTTTATGGTTTTACATACACAATCGACATAGCAGATAGGTGGGAGAGAA
GTTCCAAAAAGACATGGGACCTGACGGAGCCACTGCCTTTACAAGATGATAGTGCATCGATTATCAACCTTCTTGGCCCA
AAACCTGATGTTCACTATATTTATGTCTGTATAAAGGTTAGCCGTTGACAAGCTTGTCATAATCATCCGAACTTGCTTCC
TG-AACTCTTCATATGACTAGTTATTGAATAATCTTACATTGTTATGCAGGAGAACGACAGTGCAAGAGTGGACTTGAAG
GCCGAGGTCAATGAAGCAGACAAATGATCACATATTATAACCTTTTTGGATCATCGTGTATAACCAGTGTAGCAAATAAT
GTAGGGAATACATTTTGTAACTCTTGATTTTTGTCGTTGTTGGCAACAATTTAGCAAAATTACAGCTAAGGATGTTGCTT
CTTCGATCATCGAATTTGGAATAGAAATGAATGTGTTGTTTTCATGTCTTTCGATTTTGTGTAGAATTTACTTCCGTGTT
CACGGAACATAGGACCCGCTCGGAGTGTGGGAAATCTTAGAGAAAATGATCTAGGTTTTCTACATAAAGAAAAGCCATAA
TCTTGTGGGACGGGAAAGTATCTGGGG-AAATTTGTGGATGTTCACAACATATTGCCTAGAACCCCTAAAAAAATT--GA
AAACACCTTTCAGAAGTTTT-CTTTTTC------TGGATGTTCACAACATGTGTTTACAATTTCTAAAAAATTCAAAAGA
GAAACTTCAACTTTTTAGGAATTGTCGACACATATGTGGTGAACATTCACAATGTTTTCTGA-----TTTTATTTGAAAC
TTCTAAATTTGACTTTTGAGA-----------------GTTGGGAGCATGGTGT-GTCTAAGAGCAACAGCGTCCGTCTG
TGGCCCTGTTTGGATCCCTAAGTTAGAGTTAGTTTTAGTTAGTTGGGGCTCAAATAACCCAAAAGTATCCAAACATGATG
GGTTAGTTTGTGTTAGTTGGATCTAACCCACCCCAAAAAACTAGCCCACACTAGAGGAGCTTATTTGGGTTAGTTCTCCT
GGGCCCACTAGAAAAAAATAAAATAAAAAGTTACCCCTCTCATCCAAATAGTGTCCAAAGTAGTCAAATGATTGAGAAAG
AATATTTATTCTCAATCTAACCCTACCATCCAAACAACTCTTTGGTTAGAGTTAGTGGGTTAATTCAAGGTTAGAATCTA
ACTCTAACCTCTAACTGAGTTAGAGTATTCAAACAGGGCATGTGTCAGCATACAAAAAAAAGTGCCCACAACAGTTCCCA
TTTTCTGTCCGGTTTGTGTCTGCTCGGACGCATTTCCACCTCAAATTTGGGTCAGATATGGGTCGGAAGCGGACACAAAC
ACGTTCTCTGCATCCACCTCATTCGTCTGTGTCTGGCCTGACTTGTCTGTCATCCACCTCCCCCATTCCATCTCTATTCC
TTTTCTTTCCCTTCCCTGGCCCACCACGACCACCAACCCACCCACCCACGCGCCAGCCGGGCAAGAGTTGTGGGACACTC
CCTCCGGCGGCCTCCAGCGGCGCGGTGGCGCTTCTCTGGTGCCCTCCAGCGTCGCAGTGGCGGTCGGTTGGATTTGTGCG
GAGGCAGGCCCCCGGAGGCGCCCGTCCTCGCAGGAGCTTGTCCCCGCCGGCGCTCGTCCCCGTAGGCGGTCGGTTGGATT
TGTGCGGAGGCAGGCCCCCGGAGGCGCCCGTCCTCGCAGGAGCTTGTCCCCGCCGGCGCTCGTCCCCGTAGGCGGTCGGA
GGCGCCCGTCCCCGTAGGAGCTCGCCCCGCTGGCGCCCGTTCCCTCAAGCGCTTGTCCCCACAGGCAGGCGACGCTCATC
CCGGCCAGCACCCGCAAAAGCCCCCCGCCAGCAGCTCTTGTTGTTGTTTTTTCAAAAGAAAGGCCATGTCCGCTCAAAAA
TGGGTTGCTCGTGTTGGATTCACAAACCATGTCGCTGTCCATGTCGTGTCCGCTGTCCGTTTTGCCGATCCAAATGGATA
AAATGTTAAAAAAAAGGGACACAATTTAGGTCAGTGCGTTGGAGTTGCCTAAGGGCTTCTTTGATTCAAAGGATTCTCAA
AGGAATTTTAGAGGATTCTAATCCTTAGGAATTTTTCCTATCTTGGTTGTTTGATTCGTAGGATTGTAAACCATAGGAAT
TTTTCCATAGGATTCATTTGCACTAGATTTCATAGGAAACATCCCATCCACTCAGACCTCTTTGAAAGAATCCTGCGTTT
TTTCTATGCACAATCAAACACTCGTACAATCCTGTAGGATTCAAGACGACATTCCACTCTAACTCCCTGTTTTTTCTATT
CCCGCGTTTTGGAAATCCTACGAATCAAAGAGGCCCTAAGTCTTGAAAACACGGGATACTTTCCACTCATGGGATAAGCC
TTTGTTACCATTTTGGCGAACCAGTATGCAATTTTCCTTTATTTTCAGAAAAAAAGAACA----ACCTTTTTT---TGAC
CTAACCGTGCAA-TTTTTCTTCTGCATCCATCATGATTCAGTTCAGGCATTCAGCCCAGGCAAAGGGGGAAGTGGAAGAA
TCCCTTAGTGGAACGGATCGACGTCCATCTTCAATCCAACGCCTCCAGATTCGACACGTCTTTTTCTCTTTCCCACCTCC
TCCCTAAAAATCCCTCTCCCCCCTTCTCTAGCCGCCTTCCTTCGGCCCCGCAGCTTTTCTCTCTCCTCACCGTCGCGCGT
GTGCCCCTCCTTTCTGT--CTCTCTCTCCTCCGCGTGCGCTCCCTCACTCTTCTCCCATCCGTCTAATGGAGGCCCTCGC
C
>SNPs
-----S------------S-------S---SS--S-S-S------S---S-----------S-S----------------
-S--------SS--SSSSS---------------------------------------------------------SS--
---------------------S------------------------------S------S-------------S------
--------------S---SS-S---S-------------S--SS--------------------S-S-------S-----
----S---------S---S---S------------------S-S---SS---------S--S--------------S---
---S-----------S---------------------------S-------------SS---------------------
S------------S---S-----------------------------------S--S----SS-----------------
------------S----------------------S-------------SS----S----------------------S-
----S-S-----------------S---------S---------------S-------------------S-----S---
---------S-----S---------SSS-S---------S---------S------------------------------
--------SSSSSSS-----------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
-----------------------S-----------S--------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
----------------------------------S---------------------------------------------
------S------------------------S---------------------------------------S--------
------S------------------------------------------S------S-S-------------S-------
----S-------S--------S---------------S----------------------------------------S-
-------------------S---S-SS---------------S---------------------S---------------
---------------------------------------------SSSS----------S--------------------
--------------------------------------------------------------------S---------S-
---------S-------------------------------S-------------------------SS-----------
----------------------S--------S------------------------------------------------
-------------------------------------S------------------------------------------
----------------------S-------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------S-----------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
---S-----------------------------------------------------S----------------------
--------------------------------------------------------------------------------
-----------------------------------------S-S----------------------------SS------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
----------------------------------------S---------------------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S-------------------S------------------------
---------S----------------------------------------------------------------------
-------------S-------------S-----------------------------------------------S----
-------------------SS------------------S-------------------------S----S----S----
---------------------------------------------------S----------------------------
---S----------------------------------------------------------------------------
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-----------------------------------------S--------------------------------------
------------------------S----------S----S------------S-S---------S-------SSS----
-----S---SSSS-------------------------------------------------------------------
-----S-----S---------------S-------------------------S-----------------------S--
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>forward_182
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--TTGTCATTGACGTCGGCCTT----------------------------------------------------------
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>reverse_1570
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-------------------------------------------------CGGCCCTTTACCCCATTACC-----------
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>forward_596
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----------------AGCCGGGAATGGATCGAAAC--------------------------------------------
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>reverse_1919
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------------------------------------------------------------------------------GA
TGGCCTCCTCGATCCATT--------------------------------------------------------------
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>forward_691
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-------------------------------ACGGGACCGGACCATTTAGA-----------------------------
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>reverse_1930
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---------CGATCCATTTAGGTGCACCG---------------------------------------------------
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>forward_711
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----------------------------------------------------TCGTGCATTGGAGTTGGCT---------
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>reverse_1988
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-------------------------------------------------------------------CAGAATTGGCGAG
TTACACAGT-----------------------------------------------------------------------
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>forward_1930
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----------------------------------------------------------------------TGAAGCATGA
TGGCCTCCTC----------------------------------------------------------------------
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>reverse_3428
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-------------------------------------------------------------------GGTGGACTTGAAG
GCCGAG--------------------------------------------------------------------------
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>forward_1962
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----------------------TGCACCGTCTTGGGTTCATA--------------------------------------
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>reverse_3690
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---------GAGGACCCGCTCGGAGTG-----------------------------------------------------
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-
