>input_sequence_33037
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------------------------------------------------------------------------------AG
TAGGTATTTCCTTTGATACAGTGGATAGACGTTTGGTTCCGACAGTCTTTTCCTTCCAT----------------TACTG
TATGTGGTGGCACTAACCATGTACAATTTCCAGTGGTTGTTGGGGAAATCGCTAACTTTGCTGCATACGCTTTTGCCCCT
GCTATCTTGGTCACTCCACTTGGCGCACTTAGCATAATTATTAGGTACGGACTAAATTTAATATGATTTACAACT-GATA
CACTGAAATCTTGTATTGCTTATATTTCAGTAGTTCTGATACTTTTAGCTCGTTCTCTTACAGTGCTGTTCTTGCACGTA
TCATTTTGCGGGAGAAGCTGCACATATTTGGTGTACTCGGATGTGTTCTTTGTGTTGTGGGTTCGACAACAATTGTGCTA
CATGCCCCTGCAGAACGTGAAATTGAGTCTGTGGCAGAAGTATGGGATCTTGCTACTGAACCAGGTTTTATTCTGCATTC
TATACGCTTGCATAGTACTGTGAATAATTATTGACGTCATGTTGACATTTCAGTATGTTACTCCCACGACACT-------
------AGGGAGTACTATTTATCAACAATACTAAGGCTTAAACTTCTATGTCGCAGGATTTCTACTTTATGCAGCCATTG
TGCTCACAGCAGCTTTCGTGCTCATATTCCATTTTGTCCCACAGTATGGTCAGACACATATTATGGTGTATATTGGTATC
TGTTCTCTTTTTGGGTCTCTGTCGGTATGCTTTTCACCTCATGAATTTTTGTTTTGTATTCACTTAATCCTTAGATAGTT
GGTAGAAAAAAAACTCTCCTCAAGTTATGATTCTAATG--TCTGTCTATTCTGCTTGGTTTGGCAGGTCATGAGTGTCAA
AGCTCTTGGGATAGCCTTGAAGCTGACGTTTTCAGGGATGAACCAGCTAGTCTATCCACAAACATGGTTCTTCACACTTG
TTGTGGTTGCATGCATAGTAACACAGATGAACTATCTTAACAAGGTATGATCGATGTTTATGTTCGTTGGAAGTTATGGG
TGTTCTAAGAGAATAATTTCCATACGTAACATAGACTGAAGAACATTTTTGCTATGTTG--------ATATCTTATATGT
GTGTATTATGTTATACATTACATTCAGCTTGGTATTGTTTACTTCTGCAGGCCCTTGACACATTCAATACTGCAGTTGTT
TCGCCCATTTATTATACAATGTTTACTTCGTTGACCATTTTGGCTAGTGTAATAATGTTCAAGGTAACGGCTTTGGATCT
CCATATACTTGTTTACGTAATTGTCAGCAAGCTTTGCTTTACTTTCCGTCTTA--CAACCATGTTGACTAAATAAAACGA
TCCAGGGATCTTGGTTATTTTGGGAATGTGCAGTAAATATGC--------------------------------------
----------------------------------------------------------TAGATGTCAATCTGTACTTTAG
TGAGTTAGC-----------------------------------------------------------------------
---------------------------TTCTAGCACTAGTATGCATTGAAGTAATTCCGAGTTATTCTTTGTACCACGTG
TCAAAATATTCTATCCATAATCTTGCA-----------------------------ATCTTTGTGTTTCCTAGAACACTC
AGCCACTCAGGTTTTGGTCTTGCCACAGTAAACCTTGCAGCCATTATTACAACAATCACTCAAGTTTACCTGACTGATTG
TTTTACAGTAAACCTGTTAGCTGTGGTGTTGCCTGGCTTATTGATATCCAAATTCAGTTATAGTAAGGGCTTTGAACCAG
A-CCACTCATAGTAAGGGTTAGACGGACTATTATTGTGTTCGAAAATTCTCAAATTAGTAAGCTTATGTTGTCAAGAGCC
AGGACTATAGT-------------------TGCAATGCTCATGGAATCCTGCCTTCATTATGAGGATGAGGTGGTTATGT
CAACAGGACAAAATAGGATAAATTATGAATGTCTGACAACACGATTTAGAAATATCTATTAAATGATGATAATTTTCTGA
ATTATAATAACACTTCACATCTTCTATCCGCTAAGCTGATTGTCAAGTGATGCATCAGTCGATCCATTATTGCATTGCAC
CGAAAATGCTGCGGATCATTTATTAGTTTCACTATAACTGCATGCAGGACTGGGATCGTCAAAATCCGACTCAAATCGTC
ACGGAAATGTGTGGTTTCGTTACTATACTTTCTGGGACGTTTCTGCTTCACAAGACAAAAGACATGGTGGATGGTATGGC
TGCATTTCCTCCCTTCCTGACCTTTTTAAACATCTTCTTCTTTTACTTGAAATGACACCTATGTGTAATTTCTTATTATC
CCTTGTTGGCATGACAGGTCTCCAACCGAATTTGCCTATCCGAATTCCTAAACACGCGGATGAGGATGCATATGAATCTG
AAGGAATTCCTCTCAGGTCTGCTGCTGATGGCATCCCTCTCAGGTCACCCAGGGGCACCGAGGGAATTCCTCTCAGGTCT
GCCGCCGATGGCATTCCACTCAGGTCATCATCGAGGGGCACAGAATCGTTCCGCTCGACATCATGA--------------
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>chr1B_1_TraesCS1B01G275400
GTGTCCTACACCGGGATGTCGGCGGACAACATCAAGGGCCTGCTGCTGGCGGTCTCCTCCAGCCTCTTCATCGGGGCCAG
CTTCATCGTCAAGAAGAAGGGCCTCAAGAAGGC-------------GTCCGCGCAGGTGCGTCTCGTCTCTCCCACCCCA
CCCCACCCCACCTCCTTGTCCCCCCTCTCTCTCTGCCCCGCACGCCCCCGTGTCGTTTCACGCTGCCCGGCGAACAGCGC
GGTGCCTTCCCTGTGCCGCCGCCG---CCTCGCCGCGCTGCTGGCTCC----CTAGCCTAGATCTGCGCGGAGCCGCGCG
AGATTCGGATCTCGCTTTCGCTGTCGGTGGGGGCCTGTGCTGGACCCTGGATAGATAGGTAGGACTTTGGAGCAGCGAGC
GCATTGGGGATCGCGCTGGTTGTTGAGCTCCGATTGAGACG-TTCCTGAGCTTTGCTTGATGTTGTTCCACCAATATCAA
TGATTAGC--ACAACAGATGACACGGTGGTGATGGGCTGATGGCTCGATGTACCTTGCATTTCTTCCTTGCTCCCGCACC
TTTAATGTCACATTCAGCATGGATGTCTCGGAAATGTGACAATCATTGACTGTACAAGGGAGATGAATTCTCACTTACTC
ATGTTATTTGTTGCACCGGGAAAATGTATGTAATAGACTA---CTGTTAGCTTGTTGTCCTTTAAACTTGAAGCATATTT
GTTACACCAGGAAAATGCATGCAATAGACTCCCTTCTGTTAGCTTGGTTCCCTTAAACTTTCACTGTATATATTTTCTCT
TAAAAAATAACAATGATAAAATTCAGCATATGTTGATGATCA------------TAGGTTAAATTTTCCTTGTTTCATCT
GTGGTGTATCGTGCAAATGTCGTGCTGAAAATGTTGCTTCTGTCATTCCAGTTACATTTCAACCTTTTCCAGTGTTTATG
CTTACTTTGTTGATTTGAACAGGTGTTGGTGGCTACTCTTACCTGCTTGAGCCACTGTGGTGGATAGGACTGATAACAAG
TAGGTATTTCCTTTGATACAGTGGATAGACGTTTGGTTCCGACAGTCTTTTCCTTCCAT----------------TACTG
TATGTGGTGGCACTAACCATGTACAATTTCCAGTGGTTGTTGGGGAAATCGCTAACTTTGCTGCATACGCTTTTGCCCCT
GCTATCTTGGTCACTCCACTTGGCGCACTTAGCATAATTATTAGGTACGGACTAAATTTAATATGATTTACAACT-GATA
CACTGAAATCTTGTATTGCTTATATTTCAGTAGTTCTGATACTTTTAGCTCGTTCTCTTACAGTGCTGTTCTTGCACGTA
TCATTTTGCGGGAGAAGCTGCACATATTTGGTGTACTCGGATGTGTTCTTTGTGTTGTGGGTTCGACAACAATTGTGCTA
CATGCCCCTGCAGAACGTGAAATTGAGTCTGTGGCAGAAGTATGGGATCTTGCTACTGAACCAGGTTTTATTCTGCATTC
TATACGCTTGCATAGTACTGTGAATAATTATTGACGTCATGTTGACATTTCAGTATGTTACTCCCACGACACT-------
------AGGGAGTACTATTTATCAACAATACTAAGGCTTAAACTTCTATGTCGCAGGATTTCTACTTTATGCAGCCATTG
TGCTCACAGCAGCTTTCGTGCTCATATTCCATTTTGTCCCACAGTATGGTCAGACACATATTATGGTGTATATTGGTATC
TGTTCTCTTTTTGGGTCTCTGTCGGTATGCTTTTCACCTCATGAATTTTTGTTTTGTATTCACTTAATCCTTAGATAGTT
GGTAGAAAAAAAACTCTCCTCAAGTTATGATTCTAATG--TCTGTCTATTCTGCTTGGTTTGGCAGGTCATGAGTGTCAA
AGCTCTTGGGATAGCCTTGAAGCTGACGTTTTCAGGGATGAACCAGCTAGTCTATCCACAAACATGGTTCTTCACACTTG
TTGTGGTTGCATGCATAGTAACACAGATGAACTATCTTAACAAGGTATGATCGATGTTTATGTTCGTTGGAAGTTATGGG
TGTTCTAAGAGAATAATTTCCATACGTAACATAGACTGAAGAACATTTTTGCTATGTTG--------ATATCTTATATGT
GTGTATTATGTTATACATTACATTCAGCTTGGTATTGTTTACTTCTGCAGGCCCTTGACACATTCAATACTGCAGTTGTT
TCGCCCATTTATTATACAATGTTTACTTCGTTGACCATTTTGGCTAGTGTAATAATGTTCAAGGTAACGGCTTTGGATCT
CCATATACTTGTTTACGTAATTGTCAGCAAGCTTTGCTTTACTTTCCGTCTTA--CAACCATGTTGACTAAATAAAACGA
TCCAGGGATCTTGGTTATTTTGGGAATGTGCAGTAAATATGC--------------------------------------
----------------------------------------------------------TAGATGTCAATCTGTACTTTAG
TGAGTTAGC-----------------------------------------------------------------------
---------------------------TTCTAGCACTAGTATGCATTGAAGTAATTCCGAGTTATTCTTTGTACCACGTG
TCAAAATATTCTATCCATAATCTTGCA-----------------------------ATCTTTGTGTTTCCTAGAACACTC
AGCCACTCAGGTTTTGGTCTTGCCACAGTAAACCTTGCAGCCATTATTACAACAATCACTCAAGTTTACCTGACTGATTG
TTTTACAGTAAACCTGTTAGCTGTGGTGTTGCCTGGCTTATTGATATCCAAATTCAGTTATAGTAAGGGCTTTGAACCAG
A-CCACTCATAGTAAGGGTTAGACGGACTATTATTGTGTTCGAAAATTCTCAAATTAGTAAGCTTATGTTGTCAAGAGCC
AGGACTATAGT-------------------TGCAATGCTCATGGAATCCTGCCTTCATTATGAGGATGAGGTGGTTATGT
CAACAGGACAAAATAGGATAAATTATGAATGTCTGACAACACGATTTAGAAATATCTATTAAATGATGATAATTTTCTGA
ATTATAATAACACTTCACATCTTCTATCCGCTAAGCTGATTGTCAAGTGATGCATCAGTCGATCCATTATTGCATTGCAC
CGAAAATGCTGCGGATCATTTATTAGTTTCACTATAACTGCATGCAGGACTGGGATCGTCAAAATCCGACTCAAATCGTC
ACGGAAATGTGTGGTTTCGTTACTATACTTTCTGGGACGTTTCTGCTTCACAAGACAAAAGACATGGTGGATGGTATGGC
TGCATTTCCTCCCTTCCTGACCTTTTTAAACATCTTCTTCTTTTACTTGAAATGACACCTATGTGTAATTTCTTATTATC
CCTTGTTGGCATGACAGGTCTCCAACCGAATTTGCCTATCCGAATTCCTAAACACGCGGATGAGGATGCATATGAATCTG
AAGGAATTCCTCTCAGGTCTGCTGCTGATGGCATCCCTCTCAGGTCACCCAGGGGCACCGAGGGAATTCCTCTCAGGTCT
GCCGCCGATGGCATTCCACTCAGGTCATCATCGAGGGGCACAGAATCGTTCCGCTCGACATCATGACC------------
-----------------ATGAGACGCTTGAAGGCAACGTTGGTCAAATCATGGTGCCTCAATGCATTATACCTGGGAAGG
GAAG-----AATCTCCATTCTTTCCCCGGATAGAACTCCTTAGGTTTTGACTGTAGGACTGGGAAGGTAAAACGGCTCGG
CGCCCCTTGTAATTGTTGAGACTTTGGCAC---AGAAGTTTGGGGCTTACATCAGTTA-TACTATATATACGTCTCTGGG
CAAGATAATTAGAATGGCCAAGGACCCAAGTTTTGAACATGCCTTTTCTTTTTTCCATTTTGTGGGGAATTTTTTTTGAA
CACACCGCAGTGAGCCACAGAGGTCGTTGTCTGGAACCGCTGTATTCTTTCACATACAGTAGTTCGTTCAGAAGCATGAC
TAAATGCAAGAGCAAAATATGTCTAGC-----------------------------------------------------
---------------------------------------AAGAAGCACATATGTGTAGAACCCTACAGCTGCATCATTGC
AGATCCAAATGGGATTGCTTTTTTTTTTTTTTTTTGAGATTGCTAAACCTTCCCGGAACGCATAAGCATTCCTTAGGAGT
TCTCATGGGCACATGTTCGGA-----------------------TTGTCGTTCTTGTCAACGTAGTCGGCCTATCATCAT
CAGATGACGCACCTTTGACGTTAAACAATTGATTACTCTCGTACATTTGTTAATCCATTATGAATCACTAGATGTCAG--
------TCAACTCTCACTCTCAGTCACCTCCGAATGGCGACAATGTCCATGGTCTATCCTCCG-----TGCGAGAGCTCC
AAAAGAAGATGCATATACAAATGGGAT-----TCCAAGGTCATTGCAAACCTAGGA------GCAAGCAACTCCCGAAAG
CGAAGGCGACGTTGACCGCCGCCGG-------CCGCCACCGGCAGTAACACGGAGCTTCCAGAAC---TCGAAAGGGTCA
AACACCATCCATGGAGCTCGCCGCGCTGCTCCTGCTTCTCCCCTTCCTCCTCGCCGGCCTCCTCTACCTCGGGAAGAAGG
ACGGCGGGGTCGATGCGCGGCGCCTCCCTCCGGCTCCCCGGGGCCTGCCCGTC
>chr1D_1
GTGTCCTACACCGGGATGTCGGCGGACAACATCAAGGGCCTGCTGCTGGCGGTCTCCTCCAGCCTCTTCATCGGGGCCAG
CTTCATCGTCAAGAAGAAGGGCCTCAAGAAGGCCGGCGCCTCCGGCGTCCGCGCAGGTGCGTCTCGTCTCTCCC------
----------------------CCCTCTCTCTCCGCCCCGCACGCTCCCGCCTCGTTTCACGCCGCCCGGCGAACGGCGC
GGTGCCTTCCCTGTGCCGCCGCCGCCGCCTCGCCGCGCTGCTGGCTCC----CTAGCCTAGATCTGCGCGGAGCCGCGCG
AGATTCGGATCTCGCTTTCGCTGTCGGTGGGGGGCTGTGCTGGACCCTGGATAGATAGGTAGGACTTTGGAGCAGTGAGC
GCATTGGGGATCGGGCTGGTTGTTGAGCTCCGATTGAGACGTTCCG-GAGCTTTGCTTGATGTTGTTCCACCAATATCAA
TGATTAGCATACAACAGATGACACGGTGGTGATGGGCTGATGGCTCGACGTACCTTGCATTTCTTCCTTGCTCCTGCACC
TTCAATGTCACATTCAGCATAGATGTCTTGGAAATATGATAATCATGGACTGTACAAGGGAGATGAATTCTCACTTACTC
AAGTTATTTGTTGCACCGGGAAAGTGTATGCAATAGACTCCTTCTGTTAGCTTGTTGCCCTTTAAACGTTAAGCATATTT
GTTGCACCAGGAAAATGTATGCAAT-GACTCCCTTCTGTTAGCTTGAATCCCTTAAACTTTCAGTGTATTTCTTTTTTCT
TCAAAAATAACAATGATAAAATTCAGCATATGTTGATGATCATATGCCCTGTCCTAGGTTAAATTTTCCTTGTTTCATCT
GTGGTGTATCGTGCAAATGTTGTGCTGAAACTGTTGCTCCTGCCATTCCAGCTACATTTCAAGCTTTTCCAGTGTTTATG
CTTACTTTGTTGATTTGAACAGGTGTTGGTGGCTACTCTTACCTGCTTGAGCCACTGTGGTGGATAGGACTGATAACAAG
TAGGTATTTCCTTTGATACAGTGGATAGATGTTTGGTTCCGA--------------CAT----------------CACTG
TATGTGGTGGCACTAACGATGTACAATTTCCAGTGGTTGTTGGGGAAATCGCTAACTTTGCTGCGTACGCTTTTGCCCCT
GCTATCTTGGTCACTCCACTTGGCGCACTTAGCATAATTATTAGGTACGGACTAAATTTAATATGATTTACAACT-GATA
CACTGAAATCTTGTATTGCTTATATTTCAGTAGTTCTGATACTTTTAGCACGCTCTCTTACAGTGCTGTTCTTGCACGTA
TCATTTTGCGGGAGAAGCTGCACATATTTGGTGTACTCGGATGTGTTCTTTGTGTCGTGGGTTCGACAACAATTGTGCTA
CATGCCCCTGCAGAACGTGAAATTGAGTCTGTGGCAGAAGTATGGGATCTTGCTACTGAACCAGGTTTGATTCTGCATTC
TATACGCTTGCATAGTACTGTGAATCATTATTGACGTCATGTTGACATTTCAGTATGTTACTCCCACGACACTTATTTTT
GATCGGAGGGGGTACTATTTATCAACAATACTAAGGCTTAAACTTCTATGTTGCAGGATTTCTACTTTATGCAGCCATTG
TGCTCACAGCAGCTTTTGTGCTCATATTCCATTTTGTCCCACAGTATGGTCAGACACATATTATGGTGTATATTGGTATC
TGTTCTCTTTTTGGGTCTCTGTCGGTATGCTTTTCACGTCATGAATTTTTGTTTTGTATTCACTTAATCCTTAGATAGTT
GGTAGAAAAAAAACTCTCCTTAAGTTATGATTCTAATGTTTCTGTCTATTCCGCTTGCTTTGGCAGGTCATGAGTGTCAA
AGCTCTTGGGATAGCCTTGAAGCTGACGTTTTCAGGGATGAACCAGCTAGTCTATCCACAAACATGGTTCTTCACACTTG
TTGTGATTGCATGCATAGTAACACAGATGAACTATCTGAACAAGGTATGGTCGATGTTTATGTTCATTGGCAGTTATGTG
TGTTCTAAGAGAATAATTTCCATACGTAGCATAGCATGAAGAACATTGTTGCTATG------------TATCTTATATGT
GTGTATTATGTTATACATTATGTTCAGCTTGGTATTGTTTACTTCTGCAGGCCCTTGACACATTCAATACTGCAGTTGTT
TCGCCCATTTATTATACGATGTTTACTTCGTTGACCATTTTGGCTAGTGTAATAATGTTCAAGGTAACGGCTTTGGAGCT
CCATATACTTGTTTACGTAATTGTCAGCAAGCTTTGCTTTACTTTCTGTCTTAAACAACAATATTGACTAAATAAATCGA
TCCAGGGATCTTGGTTATTTTGGGAATGTGCAGTA----TGC--------------------------------------
----------------------------------------------------------TAGATGTCAATCTGTACTTTAG
TGAGTTACTCCCTCTGTCCCAAAATATAAGAACGTTTTTTACACTAACGTTTTTTACACTACACTAGTGTCAAAAACGTT
CTTATATTATGGGACGGAGGGAGTAGTTTCTAGCACTAGTGTGCATTGAAGTAATTCCGAGGTATTCTTTGTACCACGTG
TCAAAACATTCTATCCATAACCTTGCAGCGACATCCTATCCGAGGTATTCCGAGATATCTTTGTGTTTCCTAGAA-----
---CACTCAGGTTTTGGTCTTGCGACAGTAAACCTTGCAGCCATCATTACAACAATCACTCAAC---ACCTGGCTGATTG
TTTTACAGTAAACCTGTTAGCTGTGGTGTTGCCTGGCTGATTGATATCCAAATTCAGTTATAGTAAGGGCTTTGAACCAG
ATCCACTCATAGTAAGTGTTAGACGGCCTATTATTGCGTTTGAAAATTCTCAAATTAGTAAGTTTATGTTGTCAAGAGCC
AGGACTATAGT-------------------TGC-------------------CTTCATTGTGAGGATGAGGTGGTTATGT
TAGCACGACAAAATAGGATAAAGTATGAATGTCTGACAACACGATTCAGAAATATCTATTAAACGATGATAATCTTCTGA
ATTATAATACCACCTCACATCTTCTATCCGCTAAGCTGATTGTCAAGTGGTGCATCAGTCGATCCATTATTGCATTCCAC
TGAAAATGCTGCGGATCATTTATTAGTTTCACTATAACTGCATGCAGGACTGGGATCGTCAAAATCCGACTCAAATTGTC
ACGGAAATGTGTGGTTTTGTTACTATCCTTTCTGGGACGTTTCTGCTTCACAAGACAAAAGACATGGTGGATGGTATGAC
TGCATTTCCTCCCTTTCTGACCTTTTTAAACATCCTCTTCTTTTACTTGAAATGACACCTACGTGTAATTTCTTATTATA
CCTTGTTGGCATGACAGGTCTCCAACAGAATTTACCTATCCGAATTCCTAAACACGCGGATGAGGATGCGTATGAATCTG
AAGGAATTCCTCTCAGGTCTGCTGCTGATAGGATTCCTCTCAGGTCACCGAGGGGCACCGAAGGAATTCCTCTCAGGTCT
GCCGCCGACGGCATTCCGCTCAGATCATCATCGAGGGGCACAGAATCGTTCCGCTCGACATCATGACCTGGTGATGGTTG
CAGCTGGGTTCAAGTCCATGAGACGCTTGAGGGCAACATTGGTCAAATCATGGTGCCTGAATGCTTTATACCTGGGAAGG
GAAG-----AATCACCATTCTTTCGTCGGATAGAACTCCTTAGGTTTTGACTGTAGGACTGG-AAGGTAAAACGGCTCGG
CGCCCCTTGTAATTGTTGAGACTTTGGTAC---AGAAGTTTGGGGCTTACATCAGTTA-TACTATATATACGTCTCTGGG
CAAGATAATTAGAATGGCCAAGGACCCGAGTTTTGAACATACCTTTTCTTTTTG-CATTTTGCGGGGAATTTTTTTTAAC
AT-----------GCCACAGAGGTCGTTGTCTGCAACCGCTGAATTCTTTCACATACAGTAGTTCGTTCAGAAACATGAC
TAAATGGAAGAGCAAAATGTGCCTAGC-----------------------------------------------------
---------------------------------------AATCACATAGTGTGGCTAGAGCCGTACAGCTGCATGATTGC
AGATCCTAATGGGATTGTT-------------------------AAACCTTCCCGGAACGCATAAGAATTCCATGGGAGT
TCTCATGGGCACATGTTCAGTATCTGACCTAC---CGGCTTATCTTTTCGTTCTCGTCAACGTAGTCGGCCTATCATCAT
CAGATGACGCACCTTTGACGTTAAACAATTGATTACTCTTGTACATTTGTTAATCCATTATAAAACACTAGCTGTCAGAT
TGTCAGTCAACTCTTACTCTCAGTGACCTCCGAATGGTGACAATGTCCATGGCTTACCCTCTG-----TGCGAGAGCTCC
AAAAGAAGATGCATATACAAATGCGAT-----TCCAAGGTCATTGCAAACCTAGGA------GCAAGCAACTCCCGAAAG
CGAAGGCGCCGTTGACTGCCGCCGG--------------------TAACACTCAGCTTGCAGAACTCGTCGAAAGGGTCA
AACACCATCCATGGAGCTCGCCTCGCTGCTCCTGCTTCTGCCCTTCCTCCTCGCCGGCCTCCTCTACCTCGGGAAGAAGG
ACGGCGGGGTCGATGCGCGGCGCCTCCCTCCGGCTCCTCGCGGCCCGCCCGTC
>chr1A_1
GTGTCCTACACCGGGATGTCGGCCGACAACATCAAGGGCCTGCTGCTCGCGGTCTCCTCCAGCCTCTTCATCGGGGCCAG
CTTCATCGTCAAGAAGAAGGGCCTCAAGAAGGCCGGCGCCTCCGGCGTCCGCGCAGGTGCCTCTCTTCCCTCCC------
----------------------CCCTCTCTCTCCGCCCCGCACGCTCCCGCCTCCTTTCACGCTGCCTGGCGAGCAGCGC
GGTGCCTTCCCCGT---GCCGCCGCCGCCTCGCCGCGCTGCCGGCCGGGTCTCTAGCCTAGATCCGCGCGGAGCCGCGCG
AGATTCGGATCTCGCTTTCGCTGTCGGTGGGGGCCTGTGCTGGACCCTGGAT----AGGTAGGACTTTGGGGCAGTAGGC
GCATTGGGGATCGGGCTGGTTGTTGAGCTCCGATTGAGACGGTTCCTGAGCTTTGCTTGATGTTGTTCCACCAATATCAA
TGATTAGC--ACAACAGATGACACGGTGGTGATGGGCTGATGGCTTGATGTACCTTGCATTTCTTCCTTGCTCCTGCACC
TTTAATGTCACGTTCAGCATCCGTGTCTCGGAAATATGACAGTCATTGACTGTACAAGGGAGATGAATTCTCACTCACTC
ATGTTATTTGTTGCAA----------------------------------------------------------------
---GCAACGGGAAAATGTGTGCAATAGACTCCCTTCTGTTAGCTTGAATCCCTTAAACCTTCAATGTATATCTTTTTTCT
TCAAAAATAACAATGATAAAATTCAGCATATGTTGATGATCATATGCCCTGTCCTAGGTTAAATTTTCCTTGTTTCATCT
GTGGCGTATCGTGCAAATGTCGTGCTGAAAATGTTGCTTCTGTCA-TCCAGCTACATTTCAACCTTTTCCAGTGTCTATG
CTTACTTTGTTGATTTGAACAGGTGTTGGTGGCTACTCTTACCTGCTTGAGCCACTGTGGTGGATAGGACTGATAACAAG
TAGGTATTTCCTTTGAAACAGTGGAGAGACATTTGGTTCCGG--------------CATAGTCTTCTGCTTCCATTACTG
TATGTGGTGGTACTAACGATGTACAATTTCCAGTGGTTGTTGGGGAAATCGCTAACTTTGCTGCGTACGCTTTTGCCCCT
GCTATCTTGGTCACTCCACTTGGCGCACTTAGCATAATTATTAGGTACGGACTAAATTTGATATGATTTACAACTTGATA
CACTGAAATCTTGTATTGCTTATATTTCAGTAGTTCTGATACTTTTGGCACGTTCTCTTACAGTGCTGTTCTTGCACGTA
TCATTTTGCGGGAGAAGCTGCACATGTTTGGTGTACTCGGGTGTATTCTTTGTGTTGTGGGTTCGACAACAATTGTGCTA
CATGCCCCTGCGGAACGTGAAATTGAGTCTGTGGCAGAAGTATGGGATCTTGCTACCGAACCAGGTTTTATTCTGCATTC
TATATGCTTGCATAGTACTGTGAATCATTATT----------------------------------------------TG
GATCGGAGGGAGTACTATTTATCAACAATACTAAGGCTTAAACTTCTATGTTGCAGGATTTCTACTTTATGCAGCCATTG
TGCTCACAGCAGCTTTCGTGCTCATATTCCATTTTGTCCCACAGTATGGTCAGACACATATTATGGTGTATATTGGTATC
TGTTCTCTTTTTGGGTCTCTGTCGGTATGCTTTTCACCTCATGAATTTTTGTTTTGTATTCACTTAATCCTTAGATAGTT
GGTAGAAAAAAACTCC-------GTCATGATTCTAATGTTTCTGTCTATTCTGTTTGGTTTGGCAGGTCATGAGTGTCAA
AGCTCTTGGGATAGCCTTGAAGCTGACGTTTTCAGGGATGAATCAGCTAGTCTATCCACAAACATGGTTCTTCACACTTG
TTGTGGTTGCATGCATAGTAACACAGATGAACTATCTGAACAAGGTATGATCGATGTTTATGTTCGTTGGCAGTTATGGG
TGTTCTAAGAGAATAATTTCCACAGGTAGCATAGACTGAAGAGCATTGTTGCTATGTTGATAACTTGATATCTTATATGT
GTGTATTATGTTATACATTATGTTCAGCTTGGTATTGTTTACTTCTGCAGGCCCTTGACACATTCAATACTGCAGTTGTT
TCGCCCATTTATTATACAATGTTTACTTCGTTGACCATTTTGGCTAGTGTAATAATGTTCAAGGTAAT-GCTTTGGAGCT
CCATATACTTAT----GTAATTGTCAGCAAGCTTTGCTTTACTCTCCGTCTTAAACAACGATATTGACTAAATAAATCGA
TCCAGGGATCTTAGTTATTTTGGGAATGTTTTAGATAATTTCAATGTAGTGGGTGAACATACACATTAAAATGGGTCTAG
ATACATGCGAATCAGAAAAATGCTAAAACATACTTATTATATTTAGGAACAGAGGGAGTAGATGTCAATCTGTACTTTAG
TGAGTTAGC-----------------------------------------------------------------------
---------------------------TTCTAGCACTAGTATGCATTGAAGTAACTCTGAGTTATTCTTTGTACCACGTG
TCAAAATATTCTATCCATAACCTTGCA-----------------------------ATCTTTGTGTTTCGTAGAA-----
---CACTCAGGTTTTGGCCTTGTCACAGTAAACCTTGCAGCCATCACTACAACAATCACTCAAGTTTACCTGGCTGATTG
TTTTACAGTAAACCTGTTAGCTGTGGTGTTGCCTGGCTGATTGATATCCAAATTCAGTTATAGTAAGGGCTTTGAACCAG
ATCCACTCATAGTAAGGGTTAGACGGCCTATCATTGTGTTTGAAAATTCTCAAATTAGTAAGCTTATGTTGTCAAGAGCC
AGGACTATAGTTGCAATGCTCATGGAATCCTGC-------------------CTTCATTGTGAGGATGAGGTGGTTATGT
CAACAGGACAAAATAGGATAAAGTATGAATGTCTGACAACATGATTTAGAAATATCTATTAAACGATGATGATTTTCTGA
ATTATAATAACACCTCACATCTTCTATCCGCTAAGCTGATTGTCAAGTGGTGCATCAGTCGATCATTTATTTGATTCCAC
TGAAAATGCTGGGGATCATTTATTAGTTTCACTATAACTGCATGCAGGACTGGGATCGTCAAAATCCGACTCAAATTGTC
ACGGAAATGTGTGGTTTTGTTACTATCCTTTCTGGGACGTTTCTGCTTCACAAGACAAAAGACATGGTGGATGGTATGAC
TACATTTCCTCCCTTTCTGACCTTTTTAAGCATCCTCTTCTTTCACTTGAAATGACACCTATGTGTAATTTCTCATTATC
CCTTGTTGGCATGACAGGTCTCCAACAAAATTTACCTATCCGAATTCCGAAACACGCGGACGAGGATGCGTATGAATCTG
AAGGAATTCCTCTCAGGTCTGCTGCTGATGGGATTCCTCTCAGGTCACCCCGGGGCGCCGAAGGAATTCCTCTCAGGTCT
GCCGCGGATGGCATTCCGCTCAGGTCATCATCGAGGGGCGCAGAATCGTTCCGCTCGACATCATGACCTGGTGATGGTTG
CAGCTGGGTTCAAGCCCATGAGACGCTTGAAGGCAACATTGGTCAAGTCATGGTGCCTCGATGCTTTATACCTGGGAAGG
GAAGGGAAGAATCTCCATTCTTTCGTCGGATAGAACTCCTTAGGTTTTGACTGTAGGACTGGGAAGGTAAAACGGCTGGG
CGCCCCTTGTAATTGTTGAGACTTTGGTACAGAAGAAGTTTGGGGCTTACATCGGTTAATACTATATATACGTCTCTGGG
CAAGATAATTAGAATGGCCAAGGACCCAATTTTTGAACATACATTTTCCTTCTTTCCA-------------TTTTTTGAA
CATAAAGCAGTGAGCCACAGAGGTCGTTCTCTGGAACTGCTGTATTCCGAAATTACTTGTCGCAGAAATGGATAAAATGA
ATGTATCTCGAACTAAAATTCATCTGGAATTATTTGTCGCAGAAATGGATAAAATGGATGTATCTAGAACTAAAATTCAT
CTAGATATATCCATTTCTCCAACAAGTATTTCGGGACTGAGGGAGCACATATAACTAGAACCATGCAGCTGCATCATTGC
AGATCCAAATGGGATTGCT-------------------------AGATCTTGACGTAACCCATAATAATTCCAAAGGACT
TCTCATGAGCACATGCTCAGAACTTGACCTACCGGCGGCTTTTCTTTTCGTTCTCGTCAACCTAGTCGGCCTATCATCAT
CAGATGACGCACCTT-GACGTTAAACAATCGATTAATCTGGCACATTTTGTAATCCATTACAAAGCAGTAGATGCCAG--
------TC------CACTCTCAGTGACCTCCGAATGGCGACAATGTCCATACTCCATTGTCTATCCTCTGCCAGAGCTCC
AAAAGAAGACGCATATACAAATGGGATTCCAATCCAAGGTCACTGCAAACCTAGGACTAGGAGCAAGCGACTCCCGAAAG
CGAAGGCGACGTTGACTGCCGCCGGCCCGTCACCGCCACCGCCATTAACAGTCAGCTTCCAGAGCTCGTCGAAAGGGTCA
AACACCATCCATGGAGCTCGCCGCGCTGCTCCTGCTCCTCCCCTTCCTCCTCGCCGGCCTCCTCTGCCTCGGGAAGAAGG
ACGGCGGGGCCGATGCGCGGCGCCTCCCTCCGGCTCCTTGCGGCCTGCCCGTC
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------SSSSSS
SSSSSSSSSSSSSSSSSSSSSS-----------S-----------S----SS----------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------S-----
--------------------S--------------S--------------------------------------------
-----------------------S------S--------S-----------------S---------S-S----------
---S-------------S----------------------------SS---------------S-------S----S---
-S------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
------------------------------------------SSSSSSSSSSSSSS------------------------
-----------------S----------------------------------------------S---------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S--------------------------------S---------
----------------------------S------------------S--------------------------------
--------------------SS----------------------------------------------------------
-----------------------------------------------------------------------------S--
-----------------------------------------------------------S--S-------------S---
-----------------------------------S-SS-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S------------------------------------------------------SSSSS
SSS-----------------------------------------S---------------------------S-------
--------------------------------------S-----------------------------------------
--------------------------S-------------S---------------------------------------
---------------------------------SSSSSSSSSSSSSSSSSSS-------S--------------------
----------------------S----------------------------------------S----------------
-------------S-----------------------------------S--------------------------S---
S---------------------------------------------------------------------------S---
-----------------S--------S---------------------------------------------------S-
---------------S------------------S---------------------------------------------
--------------------------S------S-----------------------------------S----------
-------------------------------S--S--------------------------S------------------
-----------------S--------------------------------------------------------------
-------------------------------------S--------------------------S---------------
------------------------SS------------------------------------------------------
---------------------------S----------------------------------------------------
----------------------------------------S-------------S-------S-----------------
--S-SS-------------------------------------------------------------------S------
------------------S--S----------------------------------------------------------
------------------------------------------S----------SS-------S-----------------
-------------------SSSSSSSSSSSSSSSSSSSSSSSSS----------------------S-----S-------
------------------S---------------------------S-------S-------------------------
---------------------------------------S---------------------S--S---------------
------------------------S------------------------------------S------------------
--------------------------------------------------------------------------------
----------------S------------------------S--S------SS---------------------------
--------------------------------------------------------------------------------
-------------------------------------S--S------------
>forward_396
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------AGGTAGGACTTTGGAGCAGC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_1330
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TCGTTCTCTTACAGTGCTGTTCT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------
>forward_1086
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------AGACGTTTGGTTCCGACAGT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------
>reverse_2799
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TC
AGCCACTCAGGTTTTGGT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_1088
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------ACGTTTGGTTCCGACAGTCT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------
>reverse_3076
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------TGCTCATGGAATCCTGCCTT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_1089
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------ACGTTTGGTTCCGACAGTCTT-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------
>reverse_3357
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CGTC
ACGGAAATGTGTGGTT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_3092
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------GCAATGCTCATGGAATCCTGC----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------
>reverse_4762
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------GCAGTAACACGGAGCTTCCA-------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
