>input_sequence_32936
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-------------------------ATGTCGGACGAGGGGGAGGACGCGCCCGTGGCGGCCGTGGCGGCGGGCTTCGGGC
TGCCGGAGGAGCTGGCGGCCGTGCTGCCGGCGGACCCGTTCGAGCAGCTGGACGTGGCGCGCAAGATCACCTCCATCGCG
CTCGCGTCCCGCGTCGGCCGCCTCGAGGCGGAGGCCGCGGGGCTCCGCGCGCAGCTCGCCCGGCGCGACGACGCCGCCGA
GGACCTCCGCGAGCGCGTCGAGCAGCTCGAATCCGCGCTCGCGCTCGCCACCGACCGCCTCAGCCGCGCCGAGGACGACA
AGGTAATCACAGTTTGTCCGCGGCGG----------------------------------------TGGCTTGCTGAGCT
CGGCTTTCGCTGACAAGCCTCAAGTGG-TCCAGGCCATCCAGGCTCACTTCTCAG--------CCGGTGACTTCTTGGCT
GTTTGATCAGTGCTCCAGTGCGAATTGACAAAATGATGT---------TTCTCTGTCTTTTGGTTGCAGGAGACGCTGCT
GAAAGAGAAGGCGACGCTGTCAAACACCGTCAACAAGCTCAACAGAGATGTCGCCAAGGTAACAGGACCAGGACATACTG
TTGCACTGCATTTTT-GAATCAAAATTCGAGAAATGCCTGTCTGCTATATGCCTATATATCAATGACACAGTCTTAAATT
TATCAGTATATCAATTATACGTAGTATTTTCTACTTGTTAAGGTCACCTATGCCGACTGGTGTAGTCGTTACTCATGGCC
TGGATTGCAAATTATATATTTTTCCCGAC----AAAGGGTGGATAGCAAATTATATGCAAGTAAATCAACTTGTTAGTAT
GAAAATGCCACAAGTTCTCTCCTGCTGTAGCCTGTACAGAGGTTTCCTCTTTACGATTTCAGAGTCTAAAGATTGCGTGC
TTTGCTTTCTGTTTGTTCCTCCTGCTTGGTTACGCAGTTGGAAGTTTTCAAGAAGACGCTTATGCAGTCACTTCAGGAAG
ATGATGACAAACCAGTAAGTTGCCTGCATTTATATGTTATAAT------GGTTTAGTTCCTGCAGTAGCCCAGCAATGAC
TCTGGAATTCTTCTCCTGATTTTTCTTAGAATTCATCTGCATAGCAAGTAATTTTTCTGTTATAATACTTTCCTGTAGAA
CATTCCCAAGGCTAAGCTCACCGAAACATCGAATTTCTCCCCCGCGCCATCTGTCGGAGGTACTGCAGAATTTTCATGGT
TCTTGTCCTAGTTGTACTGCACGAGATCATATTTAGACCACAAGAATTAACTTGACTTGTGGATTTTATCAGATGACGAT
TCAGCATTTACAACTTCTAAATCATCACAGTTGTTTGAAACTGCAAGTTCTGCTTCAGAGGAAAGTAGCCATGCTGAGCC
AGATGGTACACGCACTAGCCACTTCTCAGTTGGTTCACACTATTGAATGTGAACTTTTTCTCACTAATATTCAACAGATA
ACACCCTTTTACACTCACAGAACCTAGGCCACCCCGCTCGCATGTATATATGCCATCGTACAACAGTACACCAAAGCTTA
CTCCTCCAGGCTCACCTCCAAGGGGTTATGCACCACTTTCACCACCAAGGAGACATTCAATCTCGATTGCGTCAATGAAC
AGGCTCGATGACAGGTCTTCGGTCTTTTCCAGTAGCCATAGCGCAATGACATCTCCATTTGACACACCAAGTCCAACAGG
TTAGCTTTGATAGCTTGGGTAGTTAGATTATGTTATCTGTAAAATACTTGCTTCCTTCATGTGAAAAAATATGAACACCT
GGGTCTGTAT-AATCTCTAGAAGTTTATAATAAATGAATACAGCTGTGATTCTTAAGGACATAATGCTGGTTCATAAATT
ATCAGTTATTTATTCTGCTTAATTATTTGTGCATTTGTTTCAGGACGAACACGAGTTGATGGGAAAGAGTTCTTTCGCCA
AGTCAGGTATATATATGTGTGTAAATGAGCTCAACTCTGGAACACACATTATTTCAATCTGTTATTAGGCAGGAAGTGGA
TATACCATTTGTTATGTTTACCTTCCTTTTCTAATATACTTGTAAATCATTGTTGGGTCTCCGCTTTTATGTACAAGCTT
TTGAATGCTTTTCCTTTCGGAGTACGTAAAATGTTTATGGCTATTCACTACTAGTATGGGTGAATACCTCTACTGCCCTC
TTGACCTCTACTTAACAACCATGCAGAAACCGCTTGTCTTATGAGCAGTTCAGCGCATTCCTAGCCAATGTGAAGGAACT
GAATGCACACAAGCAGACCAGAGAGGTATACTGTTTCTCTGCTATGTATCAA----------------------------
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-----------------GTATTATCATGTCCTTGATATATTTTTCTGGTGCTCACTAAAGCTTTTGTGACTTCTGCAGGA
TACACTAAGAAAAGCTGATGCGATATTTGGACCTGAAAACAGTGACTTGTACACCATCTTTGAGAGTCTAATTACTCGCA
CTCATCATTAG---------------------------------------------------------------------
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>chr1A_1_TraesCS1A01G254400
TTAGAAATCCCACAGGCCCATGCTTCGATACTCCCAGGTCATGGGTGGCGACCTCCTGATCCTGGTGTGGTTAAAATTAA
TACTGATGCGGCACTGAATATGGACTCAGATAAAGTGGGTGCAG--G--GGG-TTGCCCGTTCAAGCAACGCTTTGCTGG
GTGCATGGAGCAAACCACATGTTGGAGTGACGGATCCATTTATTGGTGAGACCTTGGCACTCCGTGATGGTGTTATATTT
GCAAATCTGCGCGGTTTCACACATGTGATTATGGAGACGGACTGCCTGGAGATTGTTAATCTTTGGAAAAATCGCCACAA
TAGTTTTTCTGTGATGGCACCTTTACCTCTAGAAGTTGGAGAGCTTGCTTTATCTTTTGATTTATTTGATGTTCAATATG
TATCCAGAGCGGCTAACGTACCGGCCCATCTTTGTGCAAAACATGC--------TTGCACGCTGATGGTCACCGAGAATT
GGACCGACTCGAGACCTTCCTTCTTGCTCACCAGTTTATTGGCTGATGATCTAAGAAGTTCTTTCGTTGAATAAAAGCTC
CCAGGTTTGAACAGACACACAAAAAAGAGCCCTGCATTACCAAACGTGCCGAATGGCCGTCCAG------ATTAAAGTAC
AGCCCCAACAATCCATGCACCGGCGCCGGAGTAACGGAGAGGCGTCGCCCGGATCCACACGCCGCCTCGCCGAAACGCGG
CGAGCCTTATTACCCCACGACCGAGGCGACCCCAGCCCACCCGCCCTG------------GCTGCACATACATCAC-GCA
CGAGACGAGAGCGACGAGG--------GAGGAAGCCTCCAAAGCCCGACCCAAGCCCACGGC---------CTCCCGGTC
GCGGCCACCACCACCACAGAAACCCCGCGCTCCCTCCCGTCCCGTGATCCTCATCCCCCGCGGCTAGCCTCCCTCCCCT-
-CTCCTAGATAACACTCCCACCATGCACCGGGGGGCGAGGCGACGAGGAAGACAGAGTTAGGCGGAGGTTCGGCAG----
---------CACGGAGGAGCA-----------------------------------------------------------
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----------------------GTGATGTCGGACGAGGGGGAGGACGCGCCCGTGGCGGCCGTGGCGGCGGGCTTCGGGC
TGCCGGAGGAGCTGGCGGCCGTGCTGCCGGCGGACCCGTTCGAGCAGCTGGACGTGGCGCGCAAGATCACCTCCATCGCG
CTCGCGTCCCGCGTCGGCCGCCTCGAGGCGGAGGCCGCGGGGCTCCGCGCGCAGCTCGCCCGGCGCGACGACGCCGCCGA
GGACCTCCGCGAGCGCGTCGAGCAGCTCGAATCCGCGCTCGCGCTCGCCACCGACCGCCTCAGCCGCGCCGAGGACGACA
AGGTAATCACAGTTTGTCCGCGGCGG----------------------------------------TGGCTTGCTGAGCT
CGGCTTTCGCTGACAAGCCTCAAGTGG-TCCAGGCCATCCAGGCTCACTTCTCAG--------CCGGTGACTTCTTGGCT
GTTTGATCAGTGCTCCAGTGCGAATTGACAAAATGATGT---------TTCTCTGTCTTTTGGTTGCAGGAGACGCTGCT
GAAAGAGAAGGCGACGCTGTCAAACACCGTCAACAAGCTCAACAGAGATGTCGCCAAGGTAACAGGACCAGGACATACTG
TTGCACTGCATTTTT-GAATCAAAATTCGAGAAATGCCTGTCTGCTATATGCCTATATATCAATGACACAGTCTTAAATT
TATCAGTATATCAATTATACGTAGTATTTTCTACTTGTTAAGGTCACCTATGCCGACTGGTGTAGTCGTTACTCATGGCC
TGGATTGCAAATTATATATTTTTCCCGAC----AAAGGGTGGATAGCAAATTATATGCAAGTAAATCAACTTGTTAGTAT
GAAAATGCCACAAGTTCTCTCCTGCTGTAGCCTGTACAGAGGTTTCCTCTTTACGATTTCAGAGTCTAAAGATTGCGTGC
TTTGCTTTCTGTTTGTTCCTCCTGCTTGGTTACGCAGTTGGAAGTTTTCAAGAAGACGCTTATGCAGTCACTTCAGGAAG
ATGATGACAAACCAGTAAGTTGCCTGCATTTATATGTTATAAT------GGTTTAGTTCCTGCAGTAGCCCAGCAATGAC
TCTGGAATTCTTCTCCTGATTTTTCTTAGAATTCATCTGCATAGCAAGTAATTTTTCTGTTATAATACTTTCCTGTAGAA
CATTCCCAAGGCTAAGCTCACCGAAACATCGAATTTCTCCCCCGCGCCATCTGTCGGAGGTACTGCAGAATTTTCATGGT
TCTTGTCCTAGTTGTACTGCACGAGATCATATTTAGACCACAAGAATTAACTTGACTTGTGGATTTTATCAGATGACGAT
TCAGCATTTACAACTTCTAAATCATCACAGTTGTTTGAAACTGCAAGTTCTGCTTCAGAGGAAAGTAGCCATGCTGAGCC
AGATGGTACACGCACTAGCCACTTCTCAGTTGGTTCACACTATTGAATGTGAACTTTTTCTCACTAATATTCAACAGATA
ACACCCTTTTACACTCACAGAACCTAGGCCACCCCGCTCGCATGTATATATGCCATCGTACAACAGTACACCAAAGCTTA
CTCCTCCAGGCTCACCTCCAAGGGGTTATGCACCACTTTCACCACCAAGGAGACATTCAATCTCGATTGCGTCAATGAAC
AGGCTCGATGACAGGTCTTCGGTCTTTTCCAGTAGCCATAGCGCAATGACATCTCCATTTGACACACCAAGTCCAACAGG
TTAGCTTTGATAGCTTGGGTAGTTAGATTATGTTATCTGTAAAATACTTGCTTCCTTCATGTGAAAAAATATGAACACCT
GGGTCTGTAT-AATCTCTAGAAGTTTATAATAAATGAATACAGCTGTGATTCTTAAGGACATAATGCTGGTTCATAAATT
ATCAGTTATTTATTCTGCTTAATTATTTGTGCATTTGTTTCAGGACGAACACGAGTTGATGGGAAAGAGTTCTTTCGCCA
AGTCAGGTATATATATGTGTGTAAATGAGCTCAACTCTGGAACACACATTATTTCAATCTGTTATTAGGCAGGAAGTGGA
TATACCATTTGTTATGTTTACCTTCCTTTTCTAATATACTTGTAAATCATTGTTGGGTCTCCGCTTTTATGTACAAGCTT
TTGAATGCTTTTCCTTTCGGAGTACGTAAAATGTTTATGGCTATTCACTACTAGTATGGGTGAATACCTCTACTGCCCTC
TTGACCTCTACTTAACAACCATGCAGAAACCGCTTGTCTTATGAGCAGTTCAGCGCATTCCTAGCCAATGTGAAGGAACT
GAATGCACACAAGCAGACCAGAGAGGTATACTGTTTCTCTGCTATGTATCAA----------------------------
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-----------------GTATTATCATGTCCTTGATATATTTTTCTGGTGCTCACTAAAGCTTTTGTGACTTCTGCAGGA
TACACTAAGAAAAGCTGATGCGATATTTGGACCTGAAAACAGTGACTTGTACACCATCTTTGAGAGTCTAATTACTCGCA
CTCATCATTAGAGTTCTACAATCTGAATCTTTTACCATGGTTAACTGTGAGCCAGGTTTTACTGGCATTTGTGATTAATA
TATTTGTTATTTATTGTATTTAATATCTGTAGAAGTCACCTGCTATCATTGCAGATTTCGGATATATAGTTTTTAAAAAG
TCTTGTTGCAGTCAATGTAAAGTCATGGATTGTCTGTAAGCTAGAACCTTTACATATTAATACAAATGCAGAAGTTTGCA
ATTTAGAGGCAATGCTTCTTCCCCTCTTAAATTTATGATGATATTGC---------------------------------
----------------TTTCTCTCTAGTGCCAGAATCAATGGAGCCCACCTATTTTTTATTTTATTTTGCTAAGACGATT
A--AATATTCTGTGCTCCAGGTGGAGCTTTTGGCAGT--AATCTTTATTCCCTTGTAGCAGTACTACTATAAGAATTTGG
TATGTTTAGGCCCTGAATTATCTGGCAGCCTGCTCCAAATTGCCTTTTGTTCTTCGAAGTTCGCAATAATGGCGGATTGC
TTCTTGTTCGCTAAAGAATTTGCCAATCGATTGTAATATATATCACCATTGAAATCACTTAACACATGCACCAGATTTGA
ACTCTGATTGCTGATCACAATCTGCCCATCTGTGCTTTTCGTTGTGTTGGCAACGACGCTTATTCGCTTGGGCATTACTG
TCGATTTCAGGTCAGATCCTTGAACCATGTAAACCGCACCAAGAACTTCTCCCAAAAATATATCCTGAAAACATGAACAT
TTGTAGATAATTATTAAATATGAAATGAAACTAATTTTGAAAAG----------------TTACACGGAGCATCAAGTAT
GTGCGCAG------GGAAACAAGGTGATTTGCAGTCAGTTACCACATGATGATAGAGCTTCTCTTTGATCCGAAGTTCCT
TCAATAATGCAAATAACTCTCGGACAAACTTTGACTCGGGAGTTTGCTGGGTTTGCTCCAAGGCTTCCAGGACAGACTCA
AATGAAGCAGCTTTTCGTTGCGCTGCAAGGGGAATGAGTGTGATAT
>chr4A_7
------ATCCCACAGGCTCATGCTTCGATACTCCCAGGACATGGTTGGCGACCTCCTGATCCTGGTGTGGTTAAAATTAA
TACTGATGCGGCACTGGATATGGACTCCGATAAAGTAGGTGCAG--GGAGGG-TTGCCCGCTCAAGCAACGCTTTGCTGG
GTGCATGGAGCAAACCACATGTTGGAGTGACGGATCCATTCATTGGTGAGACCCTGACACTCCGAGACGGTGTTATATTT
GCAAATCTGCGTGGTTTCACCCATGTGATTATGGAGACGGACTACCTGGAGATTGTTAATCTCTGGAAATATCACCACAA
TAGTTATTCTGTGATGGCACTTTTACTTCTAGAAGTTGGAGGGCTTGCTTTAGCTTTTGATTTGTTTGATGTTCAATATG
TATCCAGAGCGGCCAACGTACCGGCCCATCTTTGTGCAAAGCATGC--------T--------GATGGTCACCGAGAGTT
GGACTGACTCGAGACCTTCCTTTCTGCTCATCAGTTTATTGGCTGATGATGCAAGGAGTTTTTTCGTTCAATAAAAGCTC
CCAGGTTTGAACGCA-----AAAAAAGAGAG-------------------------------------------------
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>chr4A_10
---------CCATAGGCTCATGCTTCGATACTCCCAGGTCATGGGTGGCGACCTCCTGATCTTGGTGTGGTCAAGATCAA
TACTGATGCGGCACTGAGTATGGACTCAGATAAAGTGGGTGCTGGAG--GGG-TTGCCCGTTCAAGCAACGCTTTGCTGG
GTGCATGGAGCAAACCACATGTGGGACTGACGGATCCATTCATTGGTGAGACCCTGGCACTCCGAGATGGTGTTAAATTT
GCAAATCTGCGCGGTTTCACACATGTGATTATGGAGACAGACTGCCTAGAGATTGTTAATCTCTGGAAAAATCGCCACAA
TAGTCTTTCTGTGGTGGCACCTTTACTTTTAGAAGTTGGAGAGCTTGCTTTAGCTTTTAATTTGTTTGATGTTCAACATG
TATCCAGAGCGGCCAACGTATCGGCCCATCTTTGTGCAAAACATGCATGCACATT--------GATGGTCACCGAGAGTT
GGACTGACTCGAGACCTTCCTTCCTGCTCACCAGCTTATTGGCTGATGATGCAAGGAGTTCTTTCGTTGAATAAAAGCTC
CCAGGTTTGAACA-------------------------------------------------------------------
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>chr3D_10
---------CCACAGGCTCATGCTTCAATACTCCCAGGGCACGGTTGGCGACCTCCTGATCCTGGTGTGGTTAAAATTAA
TACTGATGCGGCACTGAATATGGACTCAGACAAAGTGGGTGCAGG-G--GGG-TTGCCCGCTGAAGCAACGCTTTGCTGG
GTGCATGGAGCAAACCACATGTTGGAGTGACGGATCCATTCATTGGTGAGACCCTGGCACTCTGAGATGGTGTTATATTT
GCAAATCTGCTCGGTTTCACACATGTGATTATGGAGATGGACTGCCTGGAGATTGTTAATCTCTGGAAAAATCGCCACAA
TAGTTATTCTATGGTGGCACCTGTACTTCTAGAAGTTGGAGAGCTTGCTTTAGCTTTTGATTTGTTTGATGTTCAACATG
TATCTAGAGCGGCCAACGTACCGGCCCATCTTTGTGCACAGCATGCCTGCACGCT--------GATGGTCACCGGGAGTT
GGACTGACTAGAGACCTTCCTTCCTGCTCACTAGTTTATTGGCTGATGATGCAAGGAGTTCTTTCGTTGAATAAAAGCTC
CTAGGTTTGAAC--------------------------------------------------------------------
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>chr1D_19
------------------CATGCGTCCATTCTTCCTAGACATGGCTGGGTACCACCTGATGAAGGAGTGGTGAAGATCAA
TATGGATGCAGCAGTGGGAATGGATTCAGACAAGGTGGGCGCAGG-C--GGCGTGGCACGCTCAAGTACTGCATTACTTG
GGGCTTGGAGTAAGCCTCACCACGGGGTTTCCGATCCGTTCATTGGTGAGACTTTGGCACTGCGGGATGGAGTCATCTTT
GCAAATTTACGCGGCTTCTCACATGTGATCATGGAAACAGATTGCCCGGAGATTGTCAATCTCTGGAAAACTCGTCACTA
TAGCCTTTCTGTAGTGGCACCAGTACTAGGAGACATTAGAGACCTAGCTTCAGTTTTTACTTCCTTTGATATTCAGCATG
TAAAAAGAGCAGCCAATGTACCGGCCCATCTTTGTGCAAAACATGCATGCACTTT--------GATGGTTACCGAAAGTT
GGACTGGCTCAAAACCCTCGTTCCTGCTTACCAGCTAATTAGCTGATGATGCCAGGAGTTCTTTTGTTCAAAAAAGCTC-
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>chr5B_19
------------------CATGCGTCCATTCTTCCTGGACATGGCTGGGTACCGCCTGATGAAGGAGTGGTGAAAATCAA
CACGGATGCAGCCTTGGGAATGGATTCTGATAAGGTGGGTGCAGG-C--GGAGTGGCACGCTCCAACATTGCTTTACTTG
GGGCTTGGAGTAAGCCTCACCTCGGGGTCTATGATCCGTTCATTGGTGAGACTTTAGCGCTGCGGGATGGAGTCATGTTT
GCAAATTTACGCGGCTTCTCACATGTGATCATGGAAACAGATTGCCTGGAGATTGTCAATCTCTGGAAAACTCGTCACTA
TAGCCTTTCTGTAGTGGCACCAGTAGTAGTAGAGATTAGAGAGCTAGGTTCAGTTTTTTCTTCCTTTGATATTCAACATG
TAAAACGAGCAGCCAATGTACCGGCCCATCTTTGTGCAAAACATGCATGCACTTT--------GATGGTTACCGAAAGTT
GGACTAGCTCAAAACCCTCTTTCCTGCTTACCAGCTTATTAGCTGATGATGCCAGGAGTTCTTTCGTTGAATAA------
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>chr6B_41
----------------------------------------ATGGTTGGGTACCACCTGATGAAGGAGTTGTTAAGATCAA
CACGGATGCGACTTTGGGAATGGACTCCGACAAGGTTGGTGCGGG-T--GGGGTTGCGTGCTCCAGCAGTGGTTTACTTG
GTGCGTGGAGCAAACCTCATTTTGGGATCTCTGATCCATTCATTGGTGAGACTTTGGCGCTGAGAGATGGCATAATCTTT
GCAACTCTACGCGGCTTCTCACATGTGATAATGGAGACTGATTGTCTGGAGATCGTTAATCTCTAGAGAACTCGCCACTA
TAGGTTCTCTGTGGTGGCACCAGTATTAGTAGAAATTAGAGAGCTAGCTTCCTCTTTTTCAACTTTTGATATCCAACATG
TATCCAGAGCAGCCAATGTACCGGCCCATCTTTGTGCAAAACATGCATGCACTCG--------GACAGTTACCGAAAGTT
GGACTGGCTCGAGACCTTCTTTCGTGCTCACTAGCTTGTTAGCTGATGATACCAGGAGTTCTTTTGTTGAATAAAGCT--
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-CTCTGATTGGAAC------------------------------------------------------------------
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--------------------------------------GCAAAAAAAAG-------------------------------
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>chr1D_574
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--------------------------GAGCCCTGCATTACCAAACGTGCCGAATGGCCGTCCAG------ATTAAAATAC
AGCTCCAGCAATCCATGCGCCGGCGCCGGAATAACGGAGAGGCGTCGCCCGGATCCACACGCCGCCTCGCCGAAACGCGG
CGAGCCTTATTATCC-ACGATCGAGGCGACCCCAGACGCGGGCACGCACCCACACTGGCTGCAGCACATCACGCACGGCA
CGCATCGAGAGCGACGAGG--------GAGGAAGCCTCCAAAGCCCGACCCAAGCCCATGGCGCTGGCGCGCTCCCGGTC
GCAGCCACCACCACCACAGAAACCCCGCGCTCCCTCCCGTCCCGTGATCCTAATCCCCCGCGGCTAGCCTCCCCTCTCCT
ACTCCTAGATAACACTTGCGCCATGCACCGGGG--CGAGAAGACGAGGAAAACAGANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCCCGGTGATGTCGGACGAAGGGGAGGACGCGCCCGTGGCGGCGGTAGCGGCCGGCTTCGGGC
TGCCCGAGGAGCTGGCGGCCGTGCTGCCGGCCGACCCGTTCGAGCAGCTGGACGTGGCGCGCAAGATCACCTCCATCGCG
CTCGCGTCCCGCGTCGGCCGCCTCGAGGCGGAGGCCGCGGGGCTCCGCGCGCAGCTCGCCCGGCGCGACGACGCCGCCGA
GGACCTCCGCGAGCGCGTCGAGCAGCTCGAGTCCGCGCTCGCGCTCGCCACCGACCGCCTCAGCCGCGCCGAGGACGACA
AGGTAATTACAGTTTGTCCGCGGCGGACCGCCGTGCTATTGAAAATGAAGTCG---------CCGGTGGCTTGTTGAGCT
CGGCTTTCGCTGACAAGTGTCAAGTGGTTCCAGGCCATCCAGGCTCACTTCTCAGGCTCTCAGCCGGTGACTTCTTGGCT
GTTTGATCAGTGCTCCAGTGCGAATTAACAAAATGATGT---------TTCTCTGTCTTTTGGTTGCAGGAGACGCTGCT
GAAAGAGAAGGCGACGCTGTCAAACACCGTCAACAAGCTCAACAGAGATGTCGCCAAGGTAA------CAGGACATACTG
TTGCACTGCATTTTTTGAATCGAAATTCGAGAGATGCGTGTCTTCTATAT----------CAATGGCACAATCTTAAATT
TATCGACATATCAGTTATAGGTAATATTCTTGACTTGTTGAGGTCACCTATGCGGAATGGTGTAGTCGTTACTCATGGCC
TGGATTGCAAATTGTATTTTTTTTTCTACCGAAAAAGGGTGGATTGCAAATTATATGCAAGTAAATCAACTTATTAGTAT
GAAAATGCTACAAGTTCTCTCCTGCTGTAGCCTGTACAGAGGTTTGCTCTTTATGATTTCCGAGCCTAAAGATTGCGTGC
TTTGCTTTCTGTTTGCTCCTCCTGCTTGGTTACGCAGTTGGAAGTTTTCAAGAAGACGCTTATGCAGTCACTTCAGGAAG
ATGATGACAAACCCGTAAGTTGCCTGCATTTATATGTTATAATAATAATGGTTTAGTTCCTGCAAGAGCCCAGCAATGAC
TCTGGAATTCTTCTCCTGTTTTTTCTTACAATTCAGCTGCACAGCAAGTAATTTTTCTGTTATAATACTTTCCTGTAGAA
CATTCCCAAGGCTAAGCTCACCGAAACATCGAATTTCTCCCCTGCGCCATCTGTCGGAGGTACTGCAGAATTTTCATGGT
TATTGTCCTAGTTGTACTGCACGAGGTCATATTTAGGCCACAAGAATTAACTTGACTTGTGGATTTTATCAGATGATGAT
TCAGCATTTCCAACTTCTAATTCATCACAGTTGTTTGAAACTGCAAGTTCTGCTTCAGAGGAAAGTAGCCATGCTGAGCC
AGACGGTACACTCACTAGTCACTTCTCAGTTGGTTCACACTATTGAATGTGAACTTTTTCTCACTAATATTCAACAGATA
ACATCCTTTTACACTCACAGTGCCTAGGCCACCTCGCTCGCATGTATATATGCCATCGTACAACAGTACACCAAAGCTTA
CTCCTCCAGGCTCACCTCCAAGGGGTTATGCACCACTTTCACCACCAAGGAGACATTCAATCTCGATTGCGTCAATGAAC
AGGCTCGATGACAGGTCTTCGGTCTTTTCCAGTAGCCATAGCACAATGACATCTCCATTTGACACACCAAGTCCAACAGG
TTAGCTTTGGTAGCTTGGGTAGTTAGATTATGTTATCTGTCAAATACTTGCTTCCTTTATGTGAAAAAATATGAACACCT
GGGTCTGTATTAATCTCTAG-AGTTTATAATAAATGAATACAGCTGTGATTCTTAAGGACATAACGCTGGTTCATAAATT
ATCAGTTATTTATTCTGCTTAATTATTTGTGCATTTGTTTCAGGACGAACACGAGTTGATGGGAAAGAGTTCTTTCGCCA
AGTCAGGTATATATATGTGTGTAAATGAGCTCGACTCTAGAACACACAGTATTTCAATCTGT-ATTAGGCAGGAAGTGGA
TATACCATTTGTTATGTTTACCTTCCCTTTCTAATATACTTGTAAATCCTTGTTGGGTCTCCGCTTTTATGTACAAGCTT
TTGAATGCTTTTCTTTTCGGAGTACGTAAAATGTTCATGGCTATTCACTACTAGTACGGGTGAATACCTCTACTGCCCTC
TTGACCTATACTTAACAACCATGCAGAAACCGCTTGTCTTATGAGCAGTTCAGCGCATTCCTAGCCAATGTGAAGGAACT
GAATGCACACAAGCAGACCAGAGAGGTATACTGTTTCTCTGCTATGTATCAA----------------------------
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-----------------GTATTATCATGTCCTTAAGATATTTTTCTGGTGCTCACTAAAGCTTTTGTGACTTCTGCAGGA
TACACTAAGAAAAGCTGATGCGATCTTTGGACCTGAAAACAGTGACTTGTACACCATCTTTGAGAGTCTAATTACTCGCA
CGCATCATTAGAGTTCTACAATCTGAATCTTTTCCCATGGTTAACTGTGAGCCAGCTTTTCCTGTCATTTGTGATTAATA
TATATGTTATTTATTGTATTTAATATCTGTAGAAGTCACCTGCTATCATTGCAGATTTCGGATATATAGTTTTTAAAAAT
CCTTGTTGCAGTCAATGTAAAGTCATGGATTGTAAGG----TAGACCCTTTACATATTAATACGAATGCAAAACTTTGCA
ATTTAGAGGCAATGCTTCTTCCCCTCTTAAATTTATGATG---TTGCTTATAAAAGCAGACAACTCACAACTTGAATTCA
GAAGCAAAACAAGAAATTTCTCTCTAGTGCCAGAATCAATGGAGCCCACCTATTTTTTATTTTATTTTGTTAAGACGATT
ATAAATATTCTGTGCTCCAGGTGGAGCTTTTGGTAGT--ATTCTTTATTCCTTTTTAGCAGTACTACTATAAGAATTTGG
TATGTTTAGGCTCTGAATTATCTGGCGGCCTGCTCCAAATTGCCTTTTGTTCTTCGAAGTTCGCAACAATGGCGGATTGC
TTCTTGTTTGCTAAAGAATTTGCCAATCGATTGTAATATATATCACCATCAAAATCACTTAACGCATGCACCAGATTTGA
ACTCTGATTGCTGATCACAATCTGCCCATCTGCGCTTCTCGTTGTGTTGGCAACGACGCTTATTCGCTTGGGCATTACTG
TGGATTTCAGGTCAGATCCTTGAACCATGTAAACCGCACCAAGAACTTCTCCCAAAAATATATCCTGAAAACATGAAAAT
TTGTAGATA-TTATTAAATATGAAATGAAACTAATTTTGAAAAG----------------TTACACGGAGCATCAAGTAT
GTGCGCAG------GGAAACAGGGTGATTTGCAGTCAGTTACCACATGATGATAGAGCTTCTCTCTGCTCTGAAGTTCCT
TCAATAATGAGAATAACTCTTGGGCAAACTTTGATTCAGGAGTTTGCTGGGTTTGCTTCAAGGCTTCCAGGACAGACCCA
AATGATGCAACTTTTCGTTGCGCGGTAAGGGGAATGAGTGTGATAT
>chr1B_574
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GAGCCCTGCATTACCAAACGTGCCGAATAGCCATCCAAAGCAGTATAAAAATAC
AGCTCCAGCAATCCATGCACCGGCGCCGGAGTAACGGAGAGGCGTCGCCCGGATCCACACGCCGCCTCGCCGAAACGCGG
CGAGCCTTATTACCC-ACGACCGAGGCGACCCCAGCCCAGACGCCCTG------------GCTGCACATCACGCACGGCA
CGCGTCGAGAGCGACGAGGGAGGAACCGAGGAAGCCTCCAAAGCCCGACCCAAGCCCATGGC---------CTCCCGGTC
GCAGCCACCACCACCACAGAAACCCCGCGCTCCCTCCCGTCCCGTGATCCTAATCCCCCGCGGCTAGCCTCCCTC-----
--TCCTAGATAACATTTCCACCATGCACCGGGG--CAAGAAGACGAGGAAAACAGAAGAAGGGAGAATCAGGCGGTGGAA
GTAGCACGACACGGAGGAGCCGAACCAAGGGGGCCG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CCCGGTGATGTCGGACGAAGGGGAGGACGCGCCCGTGGCGGCGGTGGCGGCGGGCTTCGGGC
TGCCGGAGGAGCTGGCGGCCGTGCTGCCGGCGGACCCATTCGAGCAGCTGGACGTGGCGCGCAAGATCACCTCCATCGCG
CTCGCGTCCCGCGTCGGCCGCCTCGAGGCGGAGGCCGCGGGGCTCCGCGCGCAGCTCGCCCAGCGCGACGACGCCGCCGA
GGACCTCCGCGAGCGCGTCGAGCAGCTCGAGTCCGCGCTCGCGCTCGCCACCGACCGCCTCAGCCGCGCCGAGGACGACA
AGGTAATTAAAGTTTGTCTGCAGCGAACTGATGTACTAGTGCACTACTGGAATCCACCAGTACCGTTGGCTTCCTGAGCT
TGGCTTTGTCTGAAAAGTGT-------TTCCAGGCCACAGCCTACAGTACGAATCAT-----------------------
---------------------GAATCAACAATTTGATGCTTCTCTCTCTTCTCTCTCTTTTGGTTGCAGGAGACGCTGCT
GAAAGAGAAGGCGACGCTGTCAAACACCGTCAACAAGCTCAACAGAGATGTCGCCAAGGTAA------CAGGACATACTG
TTGCACTGCATTTTT--AATCAAAATTCGAGAGATGTGTGCCTTCTATAT----------CAATGACACAATCTTAAATT
TATCGACATATCAGTTATAGGTAATATTCCTGACTTGTCGAGGTCACCTATGCCGAATGGTGTAGTCGTTACTCATGGCC
TGGATTGCAAATTAATTTTTTTTTCCGGC----AAAGGGTGGATTGCCAATTATATGCTAGTAAATCAACTTATTAGTAT
GAAAATACTACAAGTTCTCTCCTGCTGTAGCCTGTACAGAGGTTTGCTCTTTACGATTTCAGAGTCTAAAGATTGTGTGC
TTTGCTTTCTGTTTGCTCCTCCTGCTTGGTTACGCAGCTGGAAGTTTTCAAGAAGACGCTTATGCAGTCACTTCAGGAAG
ATGATGACAAACCCGTAAGTTATCTGTATGTATATGT-----TAATAATGGTTTAATTCCTGCAAGAGCCCAACAATGAC
TCTGGAATTCTTCTCCTGATTTTTCTTAGAATACATCTGCATAGCAAGTAATTTTTCTGTTATAATACTTTCCTGTAGAA
CATTCCCAAGGCTAAGCTCACCGAAGCTTCGAGTTTCTCCCCTGCACCATCTCTTGGAGGTACTGTAGAATTTTCATGGT
TCATGTGCTAAGTGTACTGCACGAGATCATATTTAGACCACAAGAATTAACTTGACTTGCGGATTTTATCAGACGACGAT
TCAGCATTTCCAACTTCTAATTCATCACAGTTGTTTGAAACTGCAAGTTCTGCTTCAGAGGAAAGTAGCCATGCTGAGCC
AGACGGTACACTCACTAG-CACTTCTCAGTTGGTTCACACTATTGAATGTGAACTTTTTCTCACTAATATTCAACAGATA
ACACCCTTTTACACTCACAGTGCCTAGGCCACCCCGCTCGCATGTATATATGCCATCGTACAACAGTACACCAAAGCTTA
CTCCTCCAGGCTCACCTCCAAGGGGTTATGCACCACTTTCACCACCAAGGAGACATTCAATCTCGATTGCGTCAATGAAC
AGGCTCGATGACAGGTCTTCGGTCTTTTCCAGTAGCAATAGCGCAATGACATCTCCATTTGACACACCAAGTCCAACAGG
TTAGCTTTGATAGCTTGGGTAGTTAGATTATGTTATATGTAAAATACTTGCTTCCTTTATGTGAAAAAATATGAACACCT
GGGTCTGTAT-AATCTCTAGAAGTTTATAATAGATGAATACAGCTGTGATTCTTAAGGACATAACGCTGGTTCATAAATT
ATCGGTTATTTATTCTGCTTAATTATTTGTGCATTTGTTTCAGGACGAACACGAGTTGATGGAAAAGAGTTCTTTCGCCA
AGTCAGGTATATATATGTGTGTAAATGAGCTCGACTCTGGAACACACAGTATTTCGATCTGTCATTAGGCAGGAAGTGGA
TGTGCCATTTGTTATGTTTACCTTCCTTTTCTAATATACTTGTAAATCATTGTTGGGTCTCCGCTTTTATGTACAATGCT
TTC---------CTTTTCGGAGTACGTAAAATGTTTATGGCTATTCACTACTAGTACAGGTGAATACCTCTACTGCCCTC
TTGACCTATACTTAACAACCATGCAGAAACCGCCTGTCTTATGAGCAGTTCAGCGCATTCCTAGCCAATGTGAAGGAACT
GAATGCACACAAGCAGACCAGAGAGGTATACTGTTTCTCTGCTATGTATCAAGTACTCCCCCCGTTCCAAATTACTTGAC
TTTCATTTGTCTAGATACGAATGTATCTATACTTGTTTAGTGTCTAGATACATCCGTATCTAGACAAATGGAGGTCAAGT
AATTTGGAACGGAGGGAGTATTATCATGTCCTTAAGATATTTTTCTGGTGCTCACTAAAGCTTTTGTGACTTCTGCAGGA
TACACTAAGAAAAGCTGATGCGATATTTGGACCTGAAAACAGTGACTTGTACACCATCTTTGAGAGTCTAATTACTCGCA
CTCATCATTAGAGTTCTACAATATGTATCTTTTCCCATGGTTAACTGTGAGCCAGGTTTTACTGGCATTTGTGATTAATA
TATTTGTTATTTATTGTATTTAATATCTGTAGAAGTCACCTGCTATCATTGCAGATTTCGGATATATAGTTTTTAAAAAT
TCTTGTTACAGTCAATGTAAAGTCATGGATTGTCTGTAAGCTAGAACCTTTACATATTAATACAAATGCAGAAGTTTGCA
ATTTAGAGGCAATGCTTCTTCCCCTCTTAAATTTATGATGATATTGCTTACAAACGCAGACAACTCACAACTTGAATTCA
GAAGCAAAACAAGAAATTTCCCTCTAGTGCCAGAATCAATGGAGGCCACCTATTTTTTATTTTATTTTGCTAAGACGATT
A--AATATTCTCTGCTCCAGGTGGAGCTTTTGGTAGT--AATCTTTATTCCCTTTTAGCAGTACTACTATAAGAATTTGG
TATGTTTAGGCCCTGAATTATCTGGTGGTCTGCTCCAAATTGCCTTTTGTTCTTCGAAGTTCGCAATAATGGCGGACTGC
TTCTTGTTTGCTAAAGAATTCGCCAATCGATTGTAATATACATCACCATTGAAATCACTTAACACATGCACCATATTTGA
ACTCTGATTGCTGATCACAATCTGCCCATCTGTGCTTTTCGTTGTGTTGGCAACGACAGTTATTCGCTTGGGCATTACTG
TGGATTTCAAGTCAGATCCTTGAACCATGTAAACCGCACCAAGAACTTCTCCCAAAAATATATCCTGAAAACATGAACAT
TTGTAGATAATTCTTAAATATGAAATAAAACTAATTTT---AAG----------------TTACACGGAGCATCAAGTGT
GTGCGCAG------GAAAACAAGGTGATTTGCAGTCAGTTACCACATGATGATAGAGCTTCTCTCTGCTCCGAAGTTCCT
TCAATAATGAGAATAACTCTTGGGCAAACTTTGATTCAGGAGTTTGCTGAGTTTGCTTCAAGGCTTCCAGGACAGACCCA
AATGATGCAACTTTTCGTTGCGCGGTAAGGGGAATGAGTGTGATAT
>chr1A_3760
--------------------------------------------------------------------------------
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--------------------------------------------------------------------GCTAAGATGACT
A--AATATTCTATTCTCCATGTGGACTTTTTGGTATCTAATTTTTAATTCTTCTTAAGCTGTACCACTATAAGAATCTGT
TGTGTCCAGGCCCTGAATTATTTGGTGGCCTGCTCCAAATTGCCTTTTGTTCTTCAAAGCTCGCAACGATGGCAGACTGT
TTCTTGTTCGTTAAAGAATTTGCCAATCGATTGTAATATATTTCAACATTGAAATCACTTAACACATGCACCAGCTTTGT
ACTCTGCTTGCTGATCACAATCTGCCCATCCGTGCTTTTCATTGTATCGGCAAGGACGCTTATTCGCTTCACCTTTAAAG
TTGATTTCAGGTCAGATCCTTGAACCATGTAAACCGCACCAAGAACTTCTCCCAAAAATATATCCTGAAAACACGAAAAG
TTGCAGATAATTCTTAAATTTGAAATAAAATTATATCTGCAAAGAAAATAATTTTAAATTTTACAGCGAGTATCAACTAT
CAAGTATGTGCGCAAAAAACAGGGTGATTTGCTGTCTGTTACCACATGGTGATACAGCTTCTTTTTGCTCCGAAGATCCT
TCAATAGTGACAACAACTCTTGGACAAAATTTGATTCAGGAGTTTGCCGGGTTTGCTCGAAGGCATCCAGGACAGCCCTG
AATGAAGCAGCTTTTCGTTGCATTGTAAGGGGAATGAGTGTGATAT
>chr1D_3760
--------------------------------------------------------------------------------
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--------------------------------------------------------------------GCTAAGATGACT
A--AATATTCTGTTCTCCATGTGGACTTTTTGGTATCTAATCTTTAATTCATCTTAAGCTATACCACTATAAGAATTTGT
TATGTCCAGGCCCTGAATTATTTGGTGGCCTGCTCCAAATTGCCTTTTGTTCTTCAAAGCTCGCAACGTTGGCAGACTGT
TTCTTGTTCGTTAAAGAATTTGCCAATCGATTGTAATATATTTCAACATTGAAATCACTTAACACCTGCACCAGCTTTGT
ACTCTGCTTACTGATCACAATCTGCCCATCTGTGTTTTTCATTGTGTCGGCAAGGACGCTTATTTGCTTCAGCTTTACTG
TGGATTTCAAGTCAGATCCTTGAACCATGTAAACCGCACCAAGAACTTCTCCCAAAAATATATCCTGAAAACACGTTC--
---CAGATTATTCTTAAATATGAAATAAAATTATATTTGCAAAAAAAATAATTTAAAATTTTACACCGAGTATCAAGTAA
GTGCGCGG------GAAAACAGGGTGTTTTGCAGTCTGTTACCACATGGTGATACAGCTTCTCTTTGCTCTGAAGTTCCT
TCAATAATGCGAATAACTGTCGGACAAACTTTGACTCAGGAGTTTGCTGGGTTTGCTCCAAAGCTTCCAGGACAGACTCA
AATGAAGCAGCTTTTCGTTGCGCGGGAAGGGGAATGAGTGTGATAT
>chr1B_3760
--------------------------------------------------------------------------------
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--------------------------------------------------------------------GCTAAGATGACT
A--AATATTCTGTTCTCCATGTGGACTTTTTGGTATCTAATCTTTAATTCATCTTAAGCTGTAACACTATAGAAATCTGT
TATGTCCAGGCCCTGAATTATTTGGTGGCCTGCTCCAAATTGCCTTTTGTTCTTCAAAGCTCGCAACGATGGCAGACTGT
TTCTTGTTCGTTAAAGAATTTGCCAATCGATTGTAATATATTTCAACATTGAAATCACTTAACACATGCACCAGCTTTGT
ACTCTGCTTGCTGATCACAATCTGCCCATCTGTGCTTTTCTTTGTGTCGGCAAGGACGCTTATTTGCTTCAGCTTTACTG
TGGATTTCAAGTCAGATCCTTGAACCATGTAAACCGCACCAAGAACTTCTCCCAAAAATATATCCTGAAAACACGAAAAG
TTGCAGATAATTCATAAATATGAAATAAAATTATATCTGCACAGAAAATAATTTTAAATTTTACACCGAGTATCAAGTAT
GTGCTCAG------AAAAACAGGGTGATTTGCATTCTGTTACCACATGGTGATACAGCTTCTCTTTGCTCCGAAGTTCCT
TCAATAACGCGAATAACTCTCGGACAAACTTTGACTCAGGAGTTTGCTGGGTTTGCTCCAAGGCTTCCAGGACAGACTCA
AATGAAGCAGCTTTTCGTTGCACGGTAAGGGGAATGAGTGTGATAT
>SNPs
SSSSSS-----------S--------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S-----------------------S---------------
--------------------------------------------------------------S-----------------
--------------------------S------------------------------------S----------------
-------------S-----------------------------------------SSSSSSSS--------------S--
----S------------------S--------------------------SS---S------------------------
-------------S-SSSSS--------------------------------------------------------S---
---S---S------------------------------------------------------------------------
---------------S-----------------------SS----------------------------SSSS-------
--S-S-----------------------------------------------------S---------------------
--S------------------------------------------------S------------------------S-S-
----------------S----------------SS----SS---------S-----SSS---SS--SSSSS-SSSS----
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-----------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
-------S------------------------------------------------------------------------
-----------------SS-------------------------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------SSSSSS------------
--------------------------------S----S-----S------SSSSSSSSSS----------S---------
----SSS------S-----S---S----S-SS-------S----------------S-----------------------
-----------------S-----S--------------------S---------------------------S-------
--------S------------------------------------S----------------------------------
---------------S----------------------------------------------------------------
-------------S--------------------------------------------------SS--------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
---------S----------S-----------------------------------------------------------
---S-------S------S-------------------------------------------------------------
--------------------SS----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------S---------------S-------------S-----------------
--------------------------------------------------------------------------------
-------------S------------------------------------------S-----------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S-S--------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S--------------------S-------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
----------S--------------------------S------------------------------------------
-------------------------S--------------------
>forward_1029
--------------------------------------------------------------------------------
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-------------------------------------------------AGACAGAGTTAGGCGGAGGT-----------
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----------------------------------------------
>reverse_2256
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---------------TTCCTCCTGCTTGGTTACGC---------------------------------------------
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----------------------------------------------
>forward_1908
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------------------------------------------------TGTCGCCAAGGTAACAGGAC------------
--------------------------------------------------------------------------------
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----------------------------------------------
>reverse_2724
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---TGGTACACGCACTAGCCACT---------------------------------------------------------
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----------------------------------------------
>forward_1974
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----------------------------------TGCCTGTCTGCTATATGCCT--------------------------
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----------------------------------------------
>reverse_3954
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---------------------------------ACCATGGTTAACTGTGAGCCA--------------------------
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--------------------------------------------------------------------------------
----------------------------------------------
