>input_sequence_32904
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--------------ATGC---------CCGCAGCCAATCCCGCGCCCCACCTCCACTTGGCAGAGCTCAACAGCTTCCCC
CCTCCCCGCTCCTGCCTTCCCTTCCTCGTGAGGCGGGCCGGGATCCCTTCCGAAACGGCTCTGAGGCGACGCGCACACTG
TCATTCA---TCCCGCAGATCCACGCACAACCACCTGAATAATTTACAGATCCCGGAGCGGATTTCGCACGGGAACCCGC
CGCA---GCCCACCCGCCGCCTCATCCTCCTCCTCCTCGTCGTCGTCGTCCTAGGGGCCATGGGGAACAGTATTTACAAG
TTCCTGTGCGGGGTGTGCTCGGACCTGTCCGACGCCGCCTTCCAGCCGCATGGCGCGGACGCCTCCGTCGCCGCGCTCGG
CCGCGACATCCTCGAGTTCCAGCGCACCAAGCAGGTCCCCGAGGGCCTCGGCCGCCACGTCGTCTCCTCCGCCGCCGCGC
AGGCCAACTGGTACTACCTA-------------TAATTCCGCTT-CCCCTTTGATTGATTTCGTGTTCTGAACTTCCGAT
TCATTGCCGAGCTCCTTCCAGCAATTTTGTGTTCCGAGTACCAGTAG------TTTAACTCGGAGCTGACGACGAGCTCG
CCGTCGAAGATCCAGAAAC-------------AGCTCGCTGTCGAA----CGTGGAGGATGCGAAGGCGAGCTAGCTTCG
AGGTGTCCAATTGCGAAAGCGACCACATCTGAAAGAAGAATTGGATAAAAGAAATTAGGTGGAACCATTTGTTGAAAGGA
CGCAAGTAACTGGGATATTTGGTTGAGAAAATTAAGCGTTAAGGATTTA----TTTATTTTACTTTTTGTTCATGACAGA
ACCTCAGATGGGTGC----GATAACTAATTAACTACCGTAGTTACCGGTAAACCAGACAATTAAGAACTCAGTGATATTA
CTGAGATGTTTCCTAGCAGTTGCTACCCC-TGCAGTAGGAGGTACTGATATGTTTCCTGGAACTGATTGTGAACATTCGT
AGAAGAAGGTTGTGTGTAGTGTGTGTCAGTGAAAAAGTTCTGCAACGCGCTATGATTATTTCTTACAG-AATTGAAACC-
--------GTTGGTGTTGCCGCTGTTGTGAAGGTACAAGAAGCTGCAAGTGGCATGGAAGAAGGCGAGGCCGGCCCCGAC
GACGCCGGAGGAAGCCGGCCGCCTCGTGGTGCTGACGCTCAAGAACCACCAGAAGGCGGACGTCGACGGCCTCCTCGCCT
TCTACGGCCTCCCGCACCCGAACGAGGCGGGATCGGCGCCACCGCCGGCCGCCGGTCACCACGCTCCTCCGGCCCAGCAC
AGCGCCCCCGCGCACAAGCCCCAGGGCGTCAAGTTCGAGCTGCACACGCTCCCGGTGGACGCCAAGGCGGTGGCCGACGG
CGACACGGTGACGGTGTACGTGGACACGAATGACGCCCCCAGCGAGATCAAGAAGGCCGCGGCGGAGCGCACCAAGGCGC
GCGCCGCCAGGAACTACCCCACGGCCGACGCGCTCCAGAAGACCATCGCCGACGCCGGGTACAGGATGGTTCCCAACGCC
AAGGGCGCCGAGGTGCTCGCCAAGAAGTACAGGATCAGGTTAAGGTTAGTCTTGTTGCGCCACGCC----------ATTG
TTCCGGCGATCAAGATTGGTC------------TGAATAAGTTTTGATGAGATGAAATGG---GGGATGGGATGCAGTGG
GATCGACGCGCCGGAGAGCGCGATGCCGTACGGGAAGGAGGCCAAGGAGGCGCTGCTGAAGCTGGTGGAGGGCAAGTGCC
TGACGGTGCACGTCTACAACACCGACCGCTACGGCCGGTCCGTCGGGGATCTCCACGTCGGCGGGGTCTTCGTGCAGGTG
AGAAACCAATT-AAGAACCCATACCTTCAGCTTCAGTCTTCAGAACACCTCAACGCGTGGAAGCAACTTAGA---AAGAA
CTCCAACATCAATTTCTTGCCATCTACGGCATGTCAGCTTGCATTCTTGTACTGTACTAGTTTAATAGTGCTGTGTCACA
CTA-GTAGA---------------------AGCGAACTTAAAC-AAACTGTTGCTTCTGCATTCTGCTAGGAACACGTTC
AGAAACAGTTAGTAGGCCTTTTCTGAAAGTCAACCGCTCTACAAAAA-CTTCAGAAGATAACAAATTCCCTCTTGCTTTG
TCCGCAGGAGCAAATGCTGAAGAAAGGCTTCGCGTGGCACTACACCGCCTACGACAAACGCCCGGAGCTTGCCAAGGTAA
AATCATCACCAGTCCACACACAGCTACACGCACTA--CACTGATCACCTGACTG-AAAAACGAACCATGGAGAGGTTAAT
TATGAAGTAGTAATATGGAATCAAATCATGAAGTTGCTGACAGAAACTAATCCTCTGTTTGATCCACCTGCAGTGGCAGA
GCCAGGCGCAGGCCGCCCGCAAGGGCCTGTGGGCGGCGTCCAAGCCGCAGGAGCCGTGGGAGTACAGGAAGGCCAAGCGC
AACGGCAACGCGTGA-----------------------------------------------------------------
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>chr3B_1_TraesCS3B01G113500
CGCCGTGACGACCACCAGCAACCTGAGTTGGATCGGCCCAGTTTGGGGCCTTTTCTCATGGTTTTTCTATTAGTTGACGC
TTTTCTGATAGTTTCCTGTTGTGGTTTTTAATTTTCTAATACACGGTGAACAATTTTTTAATGCATGATACGAATTTTTT
TAAATACATACTTAACTTTTTTTATTCATCAAACATTTTTAATATACAGTGATTTTTTATAAATATGATGGCCATTTTAA
AATATAGATTGAACATTTGTTAATATATACTAGTGATTTAAAAAATACACACTGAACAATTTTCTAAAATACTTATTAAA
TTTTAATAGGTTTCTAAATATCTAGCGTTGACATCCTCCTCCG-------------------------------------
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----------------------------------------------------------TCACCAGGTGCACATGGAAAAC
AGCCCAAAATATCTCAGAGAGATAGGGAGCCAATACGTACTACTAGTAGGTGCACATGGAAAA----------AGTCGTG
ACATGATCCGTCCCTG-TGTCCCTCCCAGCAGCCCAGCGCAGTGAAGAAAGCGAGTAAAAGCAGATCGGATGTGCAGA--
--GAACACTGCGTGGGAACTTACACTCAGTGCAGCAGGAGCGATG--CTTCCTTTCAATCAACTCTATCTATATAATAAA
TAAACAAACAATAGAGAAGAACATATACACGTAGCAGATGTTGAAAACCATGAACAAGCC---------------ATCCC
CAATAATTCGCTC----TCTCCAATCCATCCGGGTGCAGCTAGATGAGGTGAGGTGGCGCAAGAGCACCCACCCGAATTG
GCATCGGAAACGGCATATCTCCACCTAGGCATGCCACCTCGCGACGGAGACGCTGCTATAATCGGCAAATGGCAAAACTA
ATCTCAATCACCGAAAGCACCAACCCTACCCTGGAAGAAATCAGTCGGCAACAGCGACCGGCGGACGACGCCTCGCCGTG
CCGACATGGATAAAGTCGCGACGACGTAACCACCTTCTCCAGTTTAGGAGTATAAAC---CCCGGCGCACACCCCCTGCG
CAGGAGGAAATCCCATGC---------CCGCAGCCAATCCCGCGCCCCACCTCCACTTGGCAGAGCTCAACAGCTTCCCC
CCTCCCCGCTCCTGCCTTCCCTTCCTCGTGAGGCGGGCCGGGATCCCTTCCGAAACGGCTCTGAGGCGACGCGCACACTG
TCATTCA---TCCCGCAGATCCACGCACAACCACCTGAATAATTTACAGATCCCGGAGCGGATTTCGCACGGGAACCCGC
CGCA---GCCCACCCGCCGCCTCATCCTCCTCCTCCTCGTCGTCGTCGTCCTAGGGGCCATGGGGAACAGTATTTACAAG
TTCCTGTGCGGGGTGTGCTCGGACCTGTCCGACGCCGCCTTCCAGCCGCATGGCGCGGACGCCTCCGTCGCCGCGCTCGG
CCGCGACATCCTCGAGTTCCAGCGCACCAAGCAGGTCCCCGAGGGCCTCGGCCGCCACGTCGTCTCCTCCGCCGCCGCGC
AGGCCAACTGGTACTACCTA-------------TAATTCCGCTT-CCCCTTTGATTGATTTCGTGTTCTGAACTTCCGAT
TCATTGCCGAGCTCCTTCCAGCAATTTTGTGTTCCGAGTACCAGTAG------TTTAACTCGGAGCTGACGACGAGCTCG
CCGTCGAAGATCCAGAAAC-------------AGCTCGCTGTCGAA----CGTGGAGGATGCGAAGGCGAGCTAGCTTCG
AGGTGTCCAATTGCGAAAGCGACCACATCTGAAAGAAGAATTGGATAAAAGAAATTAGGTGGAACCATTTGTTGAAAGGA
CGCAAGTAACTGGGATATTTGGTTGAGAAAATTAAGCGTTAAGGATTTA----TTTATTTTACTTTTTGTTCATGACAGA
ACCTCAGATGGGTGC----GATAACTAATTAACTACCGTAGTTACCGGTAAACCAGACAATTAAGAACTCAGTGATATTA
CTGAGATGTTTCCTAGCAGTTGCTACCCC-TGCAGTAGGAGGTACTGATATGTTTCCTGGAACTGATTGTGAACATTCGT
AGAAGAAGGTTGTGTGTAGTGTGTGTCAGTGAAAAAGTTCTGCAACGCGCTATGATTATTTCTTACAG-AATTGAAACC-
--------GTTGGTGTTGCCGCTGTTGTGAAGGTACAAGAAGCTGCAAGTGGCATGGAAGAAGGCGAGGCCGGCCCCGAC
GACGCCGGAGGAAGCCGGCCGCCTCGTGGTGCTGACGCTCAAGAACCACCAGAAGGCGGACGTCGACGGCCTCCTCGCCT
TCTACGGCCTCCCGCACCCGAACGAGGCGGGATCGGCGCCACCGCCGGCCGCCGGTCACCACGCTCCTCCGGCCCAGCAC
AGCGCCCCCGCGCACAAGCCCCAGGGCGTCAAGTTCGAGCTGCACACGCTCCCGGTGGACGCCAAGGCGGTGGCCGACGG
CGACACGGTGACGGTGTACGTGGACACGAATGACGCCCCCAGCGAGATCAAGAAGGCCGCGGCGGAGCGCACCAAGGCGC
GCGCCGCCAGGAACTACCCCACGGCCGACGCGCTCCAGAAGACCATCGCCGACGCCGGGTACAGGATGGTTCCCAACGCC
AAGGGCGCCGAGGTGCTCGCCAAGAAGTACAGGATCAGGTTAAGGTTAGTCTTGTTGCGCCACGCC----------ATTG
TTCCGGCGATCAAGATTGGTC------------TGAATAAGTTTTGATGAGATGAAATGG---GGGATGGGATGCAGTGG
GATCGACGCGCCGGAGAGCGCGATGCCGTACGGGAAGGAGGCCAAGGAGGCGCTGCTGAAGCTGGTGGAGGGCAAGTGCC
TGACGGTGCACGTCTACAACACCGACCGCTACGGCCGGTCCGTCGGGGATCTCCACGTCGGCGGGGTCTTCGTGCAGGTG
AGAAACCAATT-AAGAACCCATACCTTCAGCTTCAGTCTTCAGAACACCTCAACGCGTGGAAGCAACTTAGA---AAGAA
CTCCAACATCAATTTCTTGCCATCTACGGCATGTCAGCTTGCATTCTTGTACTGTACTAGTTTAATAGTGCTGTGTCACA
CTA-GTAGA---------------------AGCGAACTTAAAC-AAACTGTTGCTTCTGCATTCTGCTAGGAACACGTTC
AGAAACAGTTAGTAGGCCTTTTCTGAAAGTCAACCGCTCTACAAAAA-CTTCAGAAGATAACAAATTCCCTCTTGCTTTG
TCCGCAGGAGCAAATGCTGAAGAAAGGCTTCGCGTGGCACTACACCGCCTACGACAAACGCCCGGAGCTTGCCAAGGTAA
AATCATCACCAGTCCACACACAGCTACACGCACTA--CACTGATCACCTGACTG-AAAAACGAACCATGGAGAGGTTAAT
TATGAAGTAGTAATATGGAATCAAATCATGAAGTTGCTGACAGAAACTAATCCTCTGTTTGATCCACCTGCAGTGGCAGA
GCCAGGCGCAGGCCGCCCGCAAGGGCCTGTGGGCGGCGTCCAAGCCGCAGGAGCCGTGGGAGTACAGGAAGGCCAAGCGC
AACGGCAACGCGTGATCCGTTTCCACAGGCCGCAAGCCTC---------GAGACATATGTTGTAACTGTTGTGTGCATGT
GCTGTGACCATGGACGGCTGATTGATTGATT-CGTGGCCTGCTGCGCTGCAGATCCGTAGCCCAGAGCAGCGCTCGCACC
ACTGTACTTTTTACAAGTTAGGTGTAGTGAAAG-------GACTAGCTAAGCTAGAACAGGGTCGTGAAGCAGAGGAGGC
CGGGGCACATTGAGATTGGTTGGTGTTGTGTTGTTGTTGTTGTACCTCGTGATTGATTTGTGTGATTGTGTTGTACAACT
CTTACTTGGATTGGACTGTTGATGTTGTTTTCTAACAGATTTTTCTTTTCGTGTTTTGATCCTGTTTTTTTTTTTTTGAC
ATTTGACCCTTTTTCTTATCACCAGGGGCTCGGCGGTAGGAGTACCTAGCCTACCGCCAGAACCTTTGGCGGTAGGGTAA
CGGCAGCCGCCGGCCCGTCAACGGCCAGAAGCTGACCTGGCAGACGACCTACCGCCAGCACCTTCGGCGGTAAGATATGC
AATCCTACCGTCACGGGACCCGGCGGTAGGGTGTGCAACCCTACCATAGAATAACTGTGACTTCTGGTCACAGTACGCAG
AGCCGTGGAGTGAGGCTCCCTACCGCCGGAGGCCCTGGTGG--GGTTGTGCAACCCTACCGCCACGAGCCCCGGCGGTAG
GGCTTGATCATAGTGCATTTTTTGCACTGAACTTTGATTTTTTTTCGGTA-TTTTTGCCACAACAATTTCATACACTTAA
TAACAATAATACCAAATAGCACAGATGCACACATCCACACATGTATAAACTAAGAAACATAATAGTTCAT----------
----------GAAACATCGCACACATCCACACATGTAGCAAAAAGTTTAACTAGTTCAACAAAGAGCAAATGATTCAACA
AATCCTACATTCTTAAAAAGTTGATCCCCACTACTAGCAATTCTCTCAACATGCATAATGTCCACATCAGCATGGTGCCA
CATCAGCGTTTAGTT
>chr3D_335
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--------------TAAATATCTAGCGTTGACATCCTCCTCCGATCACTAACTAGGTGCACATGGAAACCAGCCCAAAAT
ATCTTAGGCTGGCCATAGTGGGGGTAACATAACCGGTAACATGCACTTGGGACTAGCAAACATGCTTATGTGGCACACAA
TTAAAAAAGAGAGAGAAGGTTAGAGTAACATAGGTAGATATCGTATCATGTTAAATGCTATGCTACTTTGTGTCATGCAT
GGCAATAAATATGATGATCTATAATACTACTTTATGATACTATGCACTATGAAGGTACTATCATACACTAGTATCATATG
CATGATACTAGTATATGTTACTCCCCACTGTGACCAGCCTAAGAGAGACAAGGAGGCAATAAAACTGGACACACGAACGA
AGACTGGATCCACGGAGATCTATCGAAGGTCAATACCGACTGAATCCCATGAGATCCGTTGTAGAGACATCTCGACACGC
CCTCTGACGATGCTAGACACACCGTCAAGACGGGAGCAAGGTGGGAGGACTTTATTCCATCTTCAGGGAGCCGCCGCCAC
TTCTTCTTCAACACGACACAAACTCTAATCGACCTAAAACGAAGCAGGAACCCTCCCGCCGGCAAGGTCGAGGTCCACAG
CACCTCCATGTCCCTAAAGCCACTGGAGAAGAGGCAGACTGGCAGTGGCGCCGACAGGGGGTTGAGGAACCCTATAGTCA
CGTGTGGACTCAAGGAGAAAAAGGGGTACGCATGCCAGCCAAAGGCATCAATCGTATGTGTATGTGTGCATCTATTATCA
GGCAAGTGTTAATTGTCTCACCAATTATCACTTGTAAAATTTTCATATCATATCTCTTGGACATCAACCTGGGAATAGGG
CAGGTTCGTGTGGTTATTCTAGGGAGAAAAGTAAGCTTTTGGTCCCTCAAGTTAACAAGAAGTCAACATCTGGTCACTCA
TCTTTTTTGTCGACATTCAGTCCCTCATTTTTAAAAACATAGTAGTACTATAAATCAAGAAGGCGAGAGCACCAGTGGCA
ACGACTGGACAGAGAGGGGGGAGGGGCGGCAATGAGTTGCGTCCGGGAAGAAGGCCAATTTTCCGGAGGACCGATGCAGG
CGTCTTCATGGCGACGCTTCAAGGAGGTTATAGGTAGCCTCACGCTCTTTTTTTTGCATTCATCCCGCCTTTTCTCCTTC
AATTCCACGAGTCCCGCTCGAAGCTTTTAAACCACTTAGATTTGGGGAAATTTTGGGGAATGTGGGGGCTGGCTCTGGCA
AACCCAGTTTGCCAGACGAGATTCGGGGATTTCTGTGGTTTTTCTCCCCTCCTATAGGATAATCCTCTATAAACCTCCAT
GAATCTCTTCTACCAAACAAGGCCAAAAGAATCCGTTGTTTTATGGGTGAATTAAACATACTTGGTGCAGACAAATCTTG
TAGGCTTTCTTTATCAGGATTTGAATGGACATGCCATTGGAATACATTTTTTGGTTACTTCCTTGTAATAATAGAAGATA
GACGTGCCACTAAAATTTCGTGTTTTTTCTTTCTATTTTGACGTTTTTATAGCCCTCGTATGTATAGTAGAACCCTTCTT
GGAATTACCAACACCAGTGTGGCTATGTTTTTTTTGAGGGGTTGCCACCATTTGATTAATTAAGAAACAATAACATCCGG
TACAACTAAAACATCAGGTATTGTGGATAACCAAAGATAACGACCAGCAGCTAAAGAAACTGAGGCCCTAGCAAGATCGT
GAGCTTCAAAGTTGGCTTCTCTTGCTTCATGTATCACTTCTGGTTCTTCAAACTTCAGCATTCTTCTCTTGATGTCCCCT
ATAATTGCCGACGAAATTCCCATGAACGTGTACGACCTGGCTCTCCAACAGGTCGAATCCTATTCACTGCCCACAAGCGG
CAAATAGGCACCATGATGGCCACTGGCAAGCCGAGTTAGGCTGGCCCAATTTGGGGCCTTTTATCGCGTATTCCTGTTCG
ATGCAACTTTTCTGTTGTGTTTTCCTTTTCTTTTCCTAATGCAAACAATTTTTTAGCGTATGGTGAAAATACTTTTAATA
TATGATGAGTATTTTTAATACATACTAAACATTTTCTTATTATGCATTGAACATTTTTAATATACAACGATTTTTTAATA
ATATGATGACCATTTTTCAATATAGATCGAAGATTTTTAAAAATATATGGTGAACCTTTTTTAATGTACAATTTTTTTAA
AACACACGCTGAACAATTTTTTAAAATATATTACTTTTAATAGGTTTCTAAAGGCCTGCTCGGCATCACTCCGCTCCACA
CTCTCGCTCCCGGAGCCGGCGGCGTTGAAGTAAAACATTACGGAGCGGGGGAACAGGTGCTCCGCAGATCCTCGAATTTC
ATGGAGCAAATGGTTTGCCGAACAGCTCTTAAATATCTAGCGTTGACATACTCCTCCGTCACTAGGTGCACATGGAAACC
AGCCCAAAATATCTTAGCGAAACGGCGAGCCAATG---ACC------AGGTGCACATGGCAAACAGCCCAAAAAGTGGCG
ACACGCTCCGTACCTCGGGTCCCTCCCAGCAGCCCAACGCAGTGAAGAAAGTGAGTAAAGGCAGATCGGATGTGCAGGCA
GGGAATACTGCACGAGAACTTGCACTCACTGCACGAGCGACGCTTCCCTGCCTCTCATCTCAATCAACT--------AT-
-----AAACAGAAGAAAAGAAGGTA--CGCGCACCAAGTGTTGAAAACCATCCCCAATAACATTTTTTAAACAAGATCCC
CAATAATTCGATCGTTCTCTCCGATCCATCCGGC-GCAGCTAGATGAGGTGAGGTGGCGCGAGAGCACCCACCCGAATTG
GCATCGGAAACAGCATATCTCCACCTAGGCGTGCCACGTAGCAGCGGAGACGCTGCCATTATCGGCAAATGGCAAAACTA
ATCTCGATCACCGAAAGCACCAACCCTACCCCGGAAGAAATCAGTCGGCAACAGCGACCGCT-GACGACGCCTCGCCGTG
CCGACATGGATAAAGTCGCGACGACGTAACCACCTTCTCCAATCTCAATTTTAGTATAAACCCAGCGCACACCCCCTGCG
CAGGAGCAAATCCTATGCGCAGTCCGGCCGCAGCCAATCCCGCGCCCCACCTCCACTTGGCAGAGCTCAACAGCTTTCCC
CCTCCCCGCTCCTGCCTTCCCTTCCTCGTGAGGCGGG------------CCGAAACGGCTCTGAGGCGACGCGCACACTG
TCATTCTTCCTCCCGCAGATCCACGCAGAACCAACTCCATTCTTTACAGATCCCGGGGCGGATTTCGCACGGAAACCCAC
CGCCGCCGCCCACCCGCCGCGTGATCCTCCTCCTGCTCCTCGTCGTCGTCCTAGGGGCCATGGGGAACAGTATCTACAAG
TTCCTGTGCGGCGTCTGCTCGGACCTCTCCGACGCCGCCTTCCAGCCGCACGGCGCGCACGCCTCCGTCGCCGCGCTCGG
CCGCGACATCCTCGAGTTCCAGCGCACCAAGCAGGTCCCCGAGGGCCTCAGCCGCCACGTCGTCTCCTCCCCCGCCGCGC
AGGCCAACTGGTACGTACGTATGCGGCGGAGTGTAATTCCGCTTCCCCCTTTGATTGATTTTGTCTTCTGA--------T
TCCTTACCGAGCTCCCTCCGGCAATTTCGTGCTCCGAGTGCCAGTAGTTTAACTTTAACTCGGAGCTGACGACGAGCTCG
TCGTCGAAGATCCAAAAAC-------------AGCTCGCTGTCGAATCAACGTGGA---TGCGAAGGCTAGCTTCGAGCG
AGGTGTCCAATTGCGAAAGCGACCACATCTGAAAGAAGAATTGGATAAAAGAAATTAGGTGGCACCATTTGTTAAAATGA
CACAAGTAACTGGGATATTTGGTTGAGACACTTAAGCGTTAAGG----A----TTTTTTTAACTTTTTGTTCATGACAGA
GCCTCAGATAATA-----AGATAACTAATTAACTACCGTAGTCACTGGTAAACCGCGCAATTAAGAACTCGGTGCTATTA
CCGAGATGTTTCCTAGCAGAGTCTAAGGCTTGCAGCAGGAGCTACTGAGATGTTTCCTGGAACTGATTGTGAACATTCGT
AGAAGAAACTTGTTAGTAGTATCAGTA---AAAAAAATACTACCACCCACAATGATTATGTTTCTGAAAAATTGAAACCA
TTGGTGTTGCTGA------------TGTGAAGGTACAAGAAGCTCCAAGTGGCATGGAAGAAGGCGAGGCCGGCGCCGAC
CACACCAGAGGAAGCCGGGCGCCTCGTGGTGCTGACGCTCAAGAACCACCAGAAGGCGGACGTCGACGGCCTCCTCGCCT
TCTACGGCCTCCCGCACCCGAACGAGGCGGGATCGGCGCCACCGCCGGCCGCCGGTCACCACGCCCCTCCGGCGCAGCAC
AGCGCCCCCGCGCACAAGCCCCAGGGCGTCAAGTTCGAGCTGCACACGCTCCCGGTGGACGCCAAGGCGGTGGCGGACGG
CGACACGGTGACGGTGTACGTGGACACGAATGACGCTCCCAGCGAGATCAAGAAGGCCGCGGCGGAGCGCACCAAGGCGC
GCGCCGCCAGGAACTACCCCACGGCCGACGCGCTCCAGAAGACCATCGCCGCCGCGGGATACAGAATGGTTCCCAACGCC
AAGGGCGTTGAGGTGCTCGCCAAGAAGTACAGGATCAGGCTAAGGTA------------------------CTATAATTG
ATTCAGCGATCAAGATTGGCTGGCTAGTTTGAGTGAATAAGTTCTGATGAAATGAGATGAAATTGGATGGGATGCAGTGG
GATCGACGCGCCGGAGAGCGCGATGCCGTACGGGAAGGAGGCCACGGAGGCGCTGCTGAAGCTGGTGGAGGGCAAGTGCC
TGACGGTGCACGTCTACAACACCGACCGCTACGGCAGGTCCGTCGGGGATCTCCACGTCGGCGGGGTCTTCGTGCAGGTG
AGAAAAGAAACCAAGAACCCATACCTTCAG------TCTTCAGAACACCTCAACGCGTGGAAGCAACTTAGA---AAGAA
CTGCAGCATCAATTTATTGCCATCTACGGAATGTCAGCTTGCGTTCT-----TGTAGTGGTTGAAAACAGCAGTGTTACG
CATAGTAGATGGAGTATTGCACATGGTAGAAGCGAGCTTAAACAAAACTGTTGCTTCTGCATTCTGCTGGGAACACGTTC
AGAAACAGCTATGCCT--TTTTCTGAAAGTCAACGGTTCTACAAAAAACTTCAGAACATAACAAATTCCCTCTTGCTTTG
TCCGCAGGAGCAAATGCTGAAGAAAGGCTTCGCGTGGCACTACACCGCCTACGACAAACGCCCGGAGCTTGCCAAGGTAA
AATCATCACCAGTCCACATACAGCTCCACACACTA--CACTGATCACCTGACTG-AAAAA-GAACCATGGAGATATTCTG
AAGTGTCATG-----TGAAATCAAATCATGAAGTTGCTGATAGAAACTAATCCTCCCTTTGACCCACCTGCAGTGGCAGA
GCCAGGCGCAGGCCGCCCGTAAGGGCCTGTGGGCGGCGTCCAAGCCGCAGGAGCCGTGGGAGTACAGGAAGGCGAAACGC
AACGGCAACGCGTGATCCATCTCCATAGGCCGCACGCAGAGAGTTCAAGGAGACATATGTTGTAACTGTTGTGTGTATGT
GCTGTGACCATGGACAGCTGATTGATTGAT--CGTGGCCTGCCGCACTGCAGATCCGTAGCCCAGAGCAGCGCTCGCGCC
ACTGTACTTTTTATAAGTTAGGTGTGG-------TGAAAAGACTAGCTGAGCTAGCGCGGGGTCGTGAAGCAGAGGAGGC
CGGGGCACATTGAGATTGGTTGGTGTGATTGTGTTGTTGTTGTACCTGGAGATTAATTTGTGTGATTGTGTTGTACATCT
CTTACTTGGATTGGACTGTTGTTGTTGTTACTAGACAGA-----------------------------------------
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>chr3A_335
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--------------TAAATGTCTAGCGTTGACATCCTCCTCC--------------------------------------
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---------------------------------------------------------GTCACTAGGTCCACATGGAAACC
AGCCCAAAATATCTTAGAGAGACAGGGAACCAATAACCACC------AAGTGCACATGGTAAACAGCCCAAAAAGTGGCG
ACATGCCCCGTCCCTC-GGTCCCACCCAACAGCCCAGCGGAGTGAAGGAAGTGAGTAAAGGCAGATCGGATGTGCAGGCA
GGGAATACTGCACGAGAACTTGCACCCAGTGCACGAGCGACGCTTCCCTGCCTCTCAATCAACTACTCCTACGTTTAAT-
-----AAACAAAAGAAAAGAACGTATGCGCGCAGCAAGTGTTGAAAAT-----------C---------------ATCCC
CAATAATTCGATCGTTCTCTCC-ATCCATCCGGT-GCAGCCAGATGAGGTGAGGTGGCGCAAGGGCACCCACCCGAATTG
GTATCGCCAACATCAGGCCTCCACCTGCGCATGCCACGTAGCGGCGGATACGCTGCCATTATCTGCAAATGGCAAAACTA
ATCTCAATCACCGAAAGCA------------------AAATCAGTCGGCAACAGCGACC--------------CGCCGTG
CCGACATGGATAAAGTCGCGACGACGTAACCACCTTCTC------CAATTTTAGTATAA-----------ACCCCCTGCG
CAGGAGCAAATCCTATGCGCAGCTCCGCCGCAGCCAATCCCGCGCCCCACCTCCACTTGGCAGAGCTCAACAGCTTTCCC
CCTCCTCGCTCCTGCCTTCCCTTCCTCGTGAGGCGGG------------CCGAAACGGCTCTGAGGCGACGCGCACACTG
TCATTCA---TCCCGCAGATCCACGCAGAACCAACTCCATTCTTTAGAGATCCCGGAGCGGATTTCGCACGGGAACCCAC
CGCCCACAAG---CCGCCGCGTGATCCTGCTCCTGCTCCTCGTCGTCGTCCTAGGGGCCATGGGGAACAGCATATACAAG
TTCCTGTGCGGGGTCTGCTCGGACCTCTCCGACGCCGCCTTCCAGCCGCACGGCGGGGACGCCTCCGTCGCCGCGCTCGG
CCGCGACATCCTCGAGTTCCAGCGCACCAAGCAGGTCCCCGAGGGCCTCAGCCGCCACGTCGTCTCCTCCGCCGCCGCGC
AGGCCAACTGGTACGTACTA-------------TAATTCCGCTT-CCCCTTTGATTGATTTCGTGTTC-GA--------T
TCCTTGCCGAGCTCCCTCCGGCAAATTCGTGCTCGGAGTACCAGTAG------TTTAACTCGGAGCTGACGACGAGCCTG
TCAAAGACCGATTCAGAGACGACGGCCTGGCTAGCTCACTGTCGAG----CGTGGA---TGCGAAGGCTAGCTTCGAGCG
AGGTGTCCAATTCCGAAAGCGACCTGATCTGGAAGAGAAATTGAGTAAAAGAAATTAGGT---AGCACTTGTTAAAAGGA
CAAAAGAAACTAGAATTTT------------------GTTAAGGATTTTCATTTTTGTTTTACTTTCTTTTTACGGGTAT
AAACCGGTAAAGGGAACGAGATAACTAATTAACTACCATACTCACTGGTAAACCATACAATTAAGAACTCGGTGCTATTA
CTGAGATGTTTCCTAGCAATTGCTAAGGCTTGCAGCAGGAGCTACTGAGATGTTTCCTGGAATTGATTGTGAACATTCGT
AGAAGAAGCTTGTTCATAGTATCAGT--GTAAAAAAATGCTGCCACG----ATGATCATTTCTTACAA-AGTTGAAACC-
--------GCTGA------------TGTGAAGGTACAAGAAGCTGCAAGTGGCATGGAAGAAGGCGAGGCCAGCCCCGAC
CACGCCGGAGGAGGCCGGCCGCCTCGTGGTGCTGACGCTGAAGAACCACCAGAAGGCGGACGTCGACGGCCTGCTCGCCT
TCTACGGCCTCCCGCACCCGAACGAGGCGGGATCGGCGCCGCCGCCCGCCGCCGGTCACCACGCCCCTCCGGCCCAGCAC
AGCGCCCCCGCGCACAAGCCGCAGGGCGTCAAGTTCGAGCTGCACACGCTCCCGGTGGACGCCAAGGCGGTGGCGGACGG
CGACACGGTGACGGTGTACGTGGACACGAATGACGCCCCCAGCGAGATCAAGAAGGCCGCGGCGGAGCGCACCAAGGCGC
GCGCCGCCAGGAACTACCCCACGGCCGACGCGCTCCAGAAGACCATCGCCGCCGCGGGATACAGAATGGTTCCCAACGCC
AAGGGCGTTGAGGTGCTCGCCAAGAAGTACAGGATCAGGCTAAGGTAACAACTATGTACACTTGTACAGTACTATAATTG
ATTCAGTGATCAAGATCGGCTAGCTTGTGTGAACAAGTT-------ATGAAATGAGATGAAATGGGATGTGATGCAGTGG
GATCGACGCGCCGGAGAGCGCGATGCCGTACGGGAAGGAGGCCACGGAGGCGCTGCTGAAGCTGGTGGAGGGCAAGTGCC
TGACGGTGCACGTCTACAACACCGACCGCTACGGCCGGTCCGTCGGGGATCTCCACGTCGGCGGGGTCTTCGTGCAGGTG
AGAACCCATAC--------------------------CTTCAGAGCAGTTCGCCTGTTGGAAACAACTTGAGAATAAGAA
CTGCAGCATCAATTTCTTGCCATCTACGGCATGTCAGCTTGCATTCT-----TGCA---GTTGAAAACAGCAGTGTTACG
CATGGTAGA---------------------AGCGAAGTTGAAC-AAACTGTTGCTTCTGCATTCCGCAAGGAACGCGTTC
AGAAACAGCT-----GCCTTTTCTGAAAGTCAACCGCTCTCCAAGAA-CTTCAGAAGATAACAAATCCCCTCTTGCTTTG
TCCGCAGGAGCAAATGCTGAAGAAAGGCTTCGCGTGGCACTACACCGCCTACGACAAACGCCCGGAGCTTGCCAAGGTAA
AATCATCACCAGTCCACATACAGATACACGCATTACCCACTGATCACCTGACAGTAAAAA-GAACCATGGAGATATTCTG
AAGTG-------ATATGGAATCAAACCATGAAGTTGCTGACAGAAACTAATCCCCTCTTTGACCCACCTGCAGTGGCAGA
GCCAGGCGCAGGCCGCGCGCAAGGGCCTGTGGGCGGCGTCCAAGCCGCAGGAGCCGTGGGAGTACAGGAAGGCCAAGCGC
AACGGCAACGCGTGATCCATTTCAT------------CTC---------GACGCATATGTTGTAACTGTTGTGTGTATGT
GCTGTGACCATGGACAGCTGATTGATTGATTTCGTGGCCTGCTGCACTGCAGATCCGTAGCCCAGAGCAGCGCTCGCGCC
ACTGTACTTTTTACAGGCTAGGTGTAGTGAAAACTGAAAAGTCTAGCTGAGCTAGCGCGGGGTCGTGAAGCAGAGGAGGC
CGGGGCACATTGAGATTGGTTGGTGTCATTGTGTTGTTGTTGTACCTGGTGATTAATTTGTGTGATTGTGGTGTACATCT
CTTACTTGGATTGGACTGTTGGTGTTGTTTTTGAACAGA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------
>chr2D_3796
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-------------------------------------------------------------------------TTTTGAC
ACTTGACCCTTTTCCTACCGCCAGGGATCCCGGCAGTAGGATTACCTAGCCTACCGCCAGAACATTTGGCGGCAGAGTAA
CGGCAGCCGCCGTCCCGCTAACGTCCCGATGCTGACCTGGCAGACGACCTACCACCAGAGGCCTTAGCGGTAGGCTGTGC
AACCCTATCGCCATGGGCCCCGGCGGTAGGGTGTGCAACCCTACCGAAATATTTCTGCCACTTCAGGTTCCAGTACTCGG
GGCCGTGGAGTGAGGCCCCCTACCGCCGGAGGCCTTGGCGGTAGGTTGGGCAACCCTACCACCAAGGGACCTGGCGGTAG
GGTCTGATCATAGTGCATTTTTTGCACACAACTTGTATGTTGTCTTCAATTTTTTTGCCACGGCAATGTTATAGACTTAA
AAACGATAAGCATGTATCACAGCTCCATATGA--------------------------ATAATAGTTCACAAAGCAAATG
GTTCAACTAAGAAACATAGCACACATCCACACATGTAGCAAAAAGTTTTACGTAG-------------------------
--------------------------------------------------------------------------------
---------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS------------------------------------------------------------------
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--------------------------------------------------------------S---------------S-
--------------S-------S------------SSS--SSSSSSS------------S----------------S-S-
-----S---------S-S---------------------------------S-------S-----------------S--
-----S-----SS-S------S-----------SS--SSS--S-S----S---S-----------S-S---SS-SSS-SS
SSSSS------S---S------S---S-S--S----SS-------------SSS---SS---------------------
----------S-----------S----------SS---------------------------------------------
-----------S-------------------------S-S---S------------S--S--------------------
-------------------------------S----------------------------SSS-----------------
-----------------------------------------S-S-SSSSS-SSSS-S------S----------------
------S------S--------------------------------------------------------------S---
-------------------------------------SSSSSSSSSSSS-------------------------------
---------------------------S-----S--SS--SS------------------------------------S-
---S----------------S-S-----------S---S----------------------------------S------
--------------S-----------S-----------------------S-----------------------------
-------------------------------------------------S------------------------------
--------------SSS------------------------------------------------------SSSSSSSS-
--S------------S---S-------S---S------------------------------------------------
S-------------S-----------------------------------------SSS---------S----SSSSS--
--------------------------------------------------------------S----------S------
-S--------------------------S-S-------------------------S-----------------------
---------SS-S-S---------------------------S--S---------S--------------S---S-----
-------------------------SSS-------S-----S------S-------------------------------
--------S----SS-----S-SS--SS--S-----S-S----S----S-S----------------S------------
---------S--SSSSSSSSSSSSS-------------------------------------------------------
S-------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
---------------------------------------------------S---S--S-----S---------------
-------SS------------------------------S------S-SSSS-S-SSSSS-SS-SS--------------
S-S-S--------------SS----------------------S------S----S---S--------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
---------SS-------------------SSSSSS--------------------------------------------
--S--S-----------------------------------------SSSSS----S-S---S--S-SS--S----S--S
-SS-----------------------------------------------------------------------------
--------S--SSSS-----------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-----------------------------------------S------------SS--SSS
S-SSSSSSS-SS--------------------------------------------S-----S-----------------
--------------------------------------------------------------------------------
------------------S------S--------S----------------------------------------S----
---------------S-----------------------------S-------------------------------S--
--------------------------------S---------------S------SS-S---------------------
--------------------------SS-SS----------------S------S----------------------S--
---------------------S---------SS------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
-S-----------S--SSSSS-SS--SS-S----S------S---------------------S--------S--S----
------------S----SS----S--S--S-----------------------S----SSS-S-SS------S-S-S---
--S----S--S--S---S---------------------------SS-SS--SS---SS-----S---SS------S-S-
S---------------S-----------------S---S---------S-----------S---S-S-S--S--------
--SS-----------------------SS-----SS--S--S-S-SSSSS-----------SS----S-S---S------
S---S----SSSSSS--SS--SSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S----------
-----------------S------------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS
>forward_3155
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---------------TCTCTCCAATCCATCCGGGT---------------------------------------------
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---------------
>reverse_4426
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-------------------------CCCCTGCAGTAGGAGGTACT-----------------------------------
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---------------
>forward_3754
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------------------------------------------------------GGGCCATGGGGAACAGTATT------
--------------------------------------------------------------------------------
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---------------
>reverse_5123
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--CCGGCGATCAAGATTGGTCT----------------------------------------------------------
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---------------
>forward_4531
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-------------------------------AAAAAGTTCTGCAACGCGCT-----------------------------
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>reverse_6216
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-------------------------------------------------------AACAGGGTCGTGAAGCAGAG-----
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--------------------------------------------------------------------------------
---------------
