>input_sequence_32898
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--ACCATCTCCATTCCCACTCCTACCAGTACCTCCTCTCCGTCGTTGTGGATCTGTCCGGGCGAGACCGGGGTCGAT---
-CGTGCTGCATCTCGCGCGGTGAGAGGGAGCTCTGGAGTCTGGACTGGCGGCGGCGATGGGGTCGTCTGCGGTGCAGAAG
GAGGCCGTCGTCCTCAACGGCGGCGGAAGCGGAGCGGGGGAGGACCACCGGCTGCGGGCGCTGGCGGCGAGGACGGTGAC
AGACTCGCTCAGGGCGGCCGTGGCCAGGTCCAGCGCGGCGGACAAGGCGGCCAGGCTCGAGGAGTGCGCCCGGAGCCTCG
AGGCCGAGAAGGCCAAGATGGAGGTCTTCCGCCGCGAGCTCCCCATCAGCGTCCACCTCATCGCCGACGGTGCGT-CCGT
CCGCCCGCCCCGCTCTCGCAAGTCGCAAACGGTTCCAGGTTTATTGAATTGTTTGGCTGAGTTTTATCTTTCTGTCGTGT
TGGGTGCAGTGATCGAGTGGCTGAAAGATGAGGTGGCGCAGCACCGGAGACCCGCGCCGGATCAGCTGCTCGCACCGGCG
CC------GTCGCCGTCACCTGCACCGCCGGAAAAGAGGAAGGCGGAGGTCGTCAAGACGGAAGCAGACGCGAGCGACAA
GCGGAGCTGGATGAGCTCCGCGCAGCTCTGGACCTGCGGGAGCCACAGCAGCACCAGCAACAGCAATGGCGACAGCGTCA
AGAAACACGCGCAAAAGGTAGGGCCATGAAATGGGAACTA-TGGAACACCGAAAGGAGATGTGGCCAGTTCAAATTATCA
AATGTAAAAACGAGGTGGAATTTT--------------ATAACCTGTGCTTAATTAATCATGCTAACTA-GATAATTTAA
TTAAGATTGTTTTGCAAAGGGTGAAAAGTATACTAGCATAATGTCATCAAGAACTAAAAATACTAAAAAGTTGTACTATA
ATGTTCAAGAATGATGGCGAATTGTTAAACTATGTGACACTGAAAAACTGGGAAACTTTACAACTCGTCTCGTCAGTGAA
AAGTGGGGAAATTTTGTGCTAGCTT----------------------------TTTCAGCTCATGTGCAATGTTCATTTT
GGAGATTTTTGCACCACAAATATG------CCAAGATGGCTTGTCTTGCTATCTTCAGATCATACTACTTTTTTGTGGCG
GTTTTGAGGTGTCAATGTTTTCTTAAAAAAGATGTCAATTTATCCT-ACAGATTTTGCATCCCATTCCCATGACAACAAC
AATCCCAATCTCATTAGCTCATATTCTGAAGAAGTCAATTTCAGATAGCGTATCTGTCT----GTTTCTTGTTTCTTACC
TGTGTTGTTAATCTGAATTGCATCAGGTGTCCAATGCATTCATGCCACTGAATGGCTTGCCAACCTTAGCAAAATCATCG
GAGAGACCAGAGGCGGCGGCCATGGCAGTCCCGGAGCTGTCCTTCTCATCTCCAGCGATCGACGCCCCCTGCCCGGCCGC
CCCGAGTGCCGACAGCAGCGCCGTCACGGACGCTGGCGCTCAACGCGAGCAGCAGTCGGCGCAGCGGAAGGCCAGGAGGT
GCTGGTCGCCGGAGCTGCACCGCCGGTTCGTCGCCGCTCTCCAGCGCCTCGGCGGCCCGCAAGGTGGGGGTTGAGCATTT
CGTAAATCACATTATTTGTCGGAATGCTTTGGACAATTAAGATATGTTCTTCGTGGCTGGTGTGCTGAAATTTTGCTTTG
CTGTTGATGCAGTGGCCACTCCTAAGCAAATCAGGGAGATGATGAAGGTGGATGGGCTCACGAATGATGAGGTCAAGAGC
CACCTGCAGGTTTGTTCTTATTAACTTCTTTCTGTTCATCAATCTAATCTAGTAGAGTACAATTTTCCATGTTTCCGACC
ACATGTGCATCAGAACATTTACCAGAAATACAATTCTCTTCCTGCAGAAATACAGGCTGCACACACGGCGAGCATCCGAC
GGCGACCAGCAGCAGTCGGCGTCAGCCGGACAGTGGCCACGGCCGGAGCAGTACACCACGTCC-----------------
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-------------------------------------------------CAGCACAGCTCGTCGCAGTCTGGCTCGCCTC
AGGGGCCGCTGCAGCTCACCGTGTCGAGCCGGGGGATGTCGGTGACCGTCGGAGACAGCTGCGATGGCGGCGAGGAGAAC
GAAGAGGAGGACGGCAAGTCGGCGAGCTACAGCTGGGAGATGCAGCAGAACGGCACGAAGGCTTCGTTGTCGTCTTGAAC
ACAAAAGAACATGTGTAGAA---TTTCAGAGGCACGCTGCACAGCAACACACCGCTGAG-----GGGTTCAGGATTGAGG
CTT---TTTCTTCTTCTTTGTGTAAAGTGGGTGAGAGGTTCTGAGATTGAGAGGTGTGTTCTTTTTGAGGTGGAATGTGC
CGAGAGTTAACTGAACTGACGTGAGTCGTTGGGTTATAC----TG---------TATGAG---CTATGTTATTAACATTC
TATAGAACTTTTGGTTAAAAAATTGGGTGACGATCT--------------------------------------------
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>chr5B_1_TraesCS5B01G075300
GAATCTTCCGCCCATCAACCGTCATCCGGCCCCTCCATCTTTTCCAATATTGCACGCCGCTGAGGAT----TCAAGAAAG
CTTTTTTTTCTTTCAATA-------------ACGCATCGTGCTCCCCAAAAATGAAGAGG---AAAAGATTCCGGGGTGC
--AGGAGGGCCTTGTGTGGTGTTATGGGAATCTAGAGGGGGTGCGGCGTGAAAGTGCGGGAAAAGATTCCGGCTTCCGGG
GGACGGGGCACCGCGGGCGCGTGGGAGGAGGCGGTATCTGGACGCCTCTTCTGTGTTACGCGACGAAACGCCTCTGCCTC
TGCCCCCGCCTGCCAACCACATCCATCCACACCGCATGCGGGCAGCATCTTCTTTTCTCCGACTCCCACCCCCCCCTCCA
CTTTACCGTCCTGCCCCTACCACCCTCCCA--------------------------------------------------
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---------------------------TAAGTGCAAACCTTTCATGTAAAAAAATAATTATTTCTTCACCTAAAAATTG-
-----TTGTATACCCTCTTGCGTATATAACGATATTTTCTAATACTCAAGAAAGCGATT----------------TTTAT
TCCCGCAAAAGAATGTTTCTTAGATTCTTGTAAAATCTTCACTACCGCGTGGTACACTGGTGTAGTAGCTAAGTGTTGCT
AAAATTCCCAAATAAACCAACTTCTACAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTTCCGTGGACGATTCCATGCTGTTCCTTTCCGAA
ATGACCATTCTGCCCTCCCCCC-GGCCACCTGAACCGTCTCCTCCTCCGGTATAAACGCGGCACCAGCACGCAAACGGCA
CCACCATCTCCATTCCCACTCCTACCAGTACCTCCTCTCCGTCGTTGTGGATCTGTCCGGGCGAGACCGGGGTCGAT---
-CGTGCTGCATCTCGCGCGGTGAGAGGGAGCTCTGGAGTCTGGACTGGCGGCGGCGATGGGGTCGTCTGCGGTGCAGAAG
GAGGCCGTCGTCCTCAACGGCGGCGGAAGCGGAGCGGGGGAGGACCACCGGCTGCGGGCGCTGGCGGCGAGGACGGTGAC
AGACTCGCTCAGGGCGGCCGTGGCCAGGTCCAGCGCGGCGGACAAGGCGGCCAGGCTCGAGGAGTGCGCCCGGAGCCTCG
AGGCCGAGAAGGCCAAGATGGAGGTCTTCCGCCGCGAGCTCCCCATCAGCGTCCACCTCATCGCCGACGGTGCGT-CCGT
CCGCCCGCCCCGCTCTCGCAAGTCGCAAACGGTTCCAGGTTTATTGAATTGTTTGGCTGAGTTTTATCTTTCTGTCGTGT
TGGGTGCAGTGATCGAGTGGCTGAAAGATGAGGTGGCGCAGCACCGGAGACCCGCGCCGGATCAGCTGCTCGCACCGGCG
CC------GTCGCCGTCACCTGCACCGCCGGAAAAGAGGAAGGCGGAGGTCGTCAAGACGGAAGCAGACGCGAGCGACAA
GCGGAGCTGGATGAGCTCCGCGCAGCTCTGGACCTGCGGGAGCCACAGCAGCACCAGCAACAGCAATGGCGACAGCGTCA
AGAAACACGCGCAAAAGGTAGGGCCATGAAATGGGAACTA-TGGAACACCGAAAGGAGATGTGGCCAGTTCAAATTATCA
AATGTAAAAACGAGGTGGAATTTT--------------ATAACCTGTGCTTAATTAATCATGCTAACTA-GATAATTTAA
TTAAGATTGTTTTGCAAAGGGTGAAAAGTATACTAGCATAATGTCATCAAGAACTAAAAATACTAAAAAGTTGTACTATA
ATGTTCAAGAATGATGGCGAATTGTTAAACTATGTGACACTGAAAAACTGGGAAACTTTACAACTCGTCTCGTCAGTGAA
AAGTGGGGAAATTTTGTGCTAGCTT----------------------------TTTCAGCTCATGTGCAATGTTCATTTT
GGAGATTTTTGCACCACAAATATG------CCAAGATGGCTTGTCTTGCTATCTTCAGATCATACTACTTTTTTGTGGCG
GTTTTGAGGTGTCAATGTTTTCTTAAAAAAGATGTCAATTTATCCT-ACAGATTTTGCATCCCATTCCCATGACAACAAC
AATCCCAATCTCATTAGCTCATATTCTGAAGAAGTCAATTTCAGATAGCGTATCTGTCT----GTTTCTTGTTTCTTACC
TGTGTTGTTAATCTGAATTGCATCAGGTGTCCAATGCATTCATGCCACTGAATGGCTTGCCAACCTTAGCAAAATCATCG
GAGAGACCAGAGGCGGCGGCCATGGCAGTCCCGGAGCTGTCCTTCTCATCTCCAGCGATCGACGCCCCCTGCCCGGCCGC
CCCGAGTGCCGACAGCAGCGCCGTCACGGACGCTGGCGCTCAACGCGAGCAGCAGTCGGCGCAGCGGAAGGCCAGGAGGT
GCTGGTCGCCGGAGCTGCACCGCCGGTTCGTCGCCGCTCTCCAGCGCCTCGGCGGCCCGCAAGGTGGGGGTTGAGCATTT
CGTAAATCACATTATTTGTCGGAATGCTTTGGACAATTAAGATATGTTCTTCGTGGCTGGTGTGCTGAAATTTTGCTTTG
CTGTTGATGCAGTGGCCACTCCTAAGCAAATCAGGGAGATGATGAAGGTGGATGGGCTCACGAATGATGAGGTCAAGAGC
CACCTGCAGGTTTGTTCTTATTAACTTCTTTCTGTTCATCAATCTAATCTAGTAGAGTACAATTTTCCATGTTTCCGACC
ACATGTGCATCAGAACATTTACCAGAAATACAATTCTCTTCCTGCAGAAATACAGGCTGCACACACGGCGAGCATCCGAC
GGCGACCAGCAGCAGTCGGCGTCAGCCGGACAGTGGCCACGGCCGGAGCAGTACACCACGTCC-----------------
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-------------------------------------------------CAGCACAGCTCGTCGCAGTCTGGCTCGCCTC
AGGGGCCGCTGCAGCTCACCGTGTCGAGCCGGGGGATGTCGGTGACCGTCGGAGACAGCTGCGATGGCGGCGAGGAGAAC
GAAGAGGAGGACGGCAAGTCGGCGAGCTACAGCTGGGAGATGCAGCAGAACGGCACGAAGGCTTCGTTGTCGTCTTGAAC
ACAAAAGAACATGTGTAGAA---TTTCAGAGGCACGCTGCACAGCAACACACCGCTGAG-----GGGTTCAGGATTGAGG
CTT---TTTCTTCTTCTTTGTGTAAAGTGGGTGAGAGGTTCTGAGATTGAGAGGTGTGTTCTTTTTGAGGTGGAATGTGC
CGAGAGTTAACTGAACTGACGTGAGTCGTTGGGTTATAC----TG---------TATGAG---CTATGTTATTAACATTC
TATAGAACTTTTGGTTAAAAAATTGGGTGACGATCTGTCGTGCGTGCACTCCATGGCATCCACCAGGAGGAGCTCACTGC
CAATTTTCCGTGTGGCAGCAGAGCCTTGGATCTTCATCCTATGCTACAACACTAATATG---TAAGTTTGGAAAATCCAT
ATATTGGTGGCGCGATAAACCAAGGGTAATATCTCACTAGA--------TGTTAGTGGACATAACATTACTATGTTCTAA
TG-TTTTTGTAGAAAGGGGGATTAACTCAGAGGCCCCTGCATCATTAC-ATGCACACATATGTATCTATTATATCCAACT
TTTTTTGAGGGAAATATTATATCTAAATAGAAGCTCCCTACTATTCGATTTCTCTTCATGCAGC--CCATCCACATCAGC
GATCAACATGTAGCCTTCCACCGAAGCAAATCTGCCACCTCAACAATTCTATTTGTTTTTCTTCTTCAAATAAACGACAT
-----TTTTTTTACCCCGTCACTCTGTTTGCCGCCCCTTCCACTTCATGACCGCTGCCAGCTGGTAATATGTTGTCCCAA
GCCAAGGACATTGATTGGATGGTCCGAAGTTCCCAAGCCAAGGACATTGATTGGATGGTCCGAAGTCTCTGTTGTCTAAT
AGCCATCGTGCTAGTGTTTCGCGTGTTGGTTGGCAGATATCTGCAGTCCTCGACGATGGCTCCTTTCTCCATAACAGGTT
CTCTCTCCTAGCCCCTTCTCGCGGTCTCTTGATTCTGCTCCCACACGCTAAACGTGTTGTGTCACGTAGTTGAGGCGCAT
CCGGGTGGACTCAACCGAGTTAGTTAGATAAAGATAGATAGCTAAGATTCTTGCAACAACATTCATCTCAATCTCTCTAT
TCTTTCTTATCTCAAGGATATGCCCGCGCCTATATAACATATAGCCGTCGCCTCCAACGAGGTACGACGCTTACCACAAG
TTTACATGGTATACAGAGCATCTTCTATCCATTTCATCTAGCCGATCCCATCTCCCACCACCAAGTCCTAGCCATGTCGT
CCTTCTCCGACATCAT
>chr5D_1
GAATCTTCCACCCATCAACCATCATCCGGCCCCTCCATCTTTTCCAATATTACA-------------------AGAAAAG
CGTCTCGGAACAACCAACAGTGGCGTTACGGACGCATCGTGCTTGGCAAAAAAGAAAGGAAGAAACAGATTCCGGGATGC
--AGGAGGGCCTTGTGTGGTATTATGGGAACCTAGAGGGGGCCCGTCGTAAAAGTGCGGGAAAAGATTCCG-------GG
GGACGGGGCACCGCGGGCGCGTGGGAGGAGGCGGTATCTGGACGCCTCTTCTGTGTTACGCGACGAAACGCCTCTGCCTC
CGCCT--GCCTGCCAACCACATCCATCCACACCGCATGCGGGCAGCATCTTCTTTTCTCCGACTCCCACCTCCCCCAT--
-TTTACCATCCTGCCCCTGCCACCCCCATAA-------------------------------------------------
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-------------------------------------------------------ATGCAAACCATCCATGGCAAAAATA
ATAATAAAAGCATTAGTAGTACTCAACAAAATCCTACT-----CAACAAAATGTTCTTTAGATCATTGTAAAATCTTCAC
TAGTGTGTACATAAGAAAGTATCTTCGTAAATGCAAACCATCCATGTAAAAAAAGAG-TATTTCTCCACCTAAAAATTGT
ATATATTGTATACCCTCTTGCGTATATAAGAAAAAAGATTACCACTACTAGTGTGTCCTACTCAACAAAATGTTCTTTAT
TCCCGCAAAAAAATGTTTTTTAGATTCTTGTAAAATCTTCACTACCGCGTGGTACACTGGTGTAGTACGTAAGTGTTGCT
ACAATTCCCAAATAAACCAACTTCTACAATTAGCTAGAAAAGCACTGGGCAGCTTGGTAATCAACCCTGTGAATTGTTTC
CCGTGACAAAAACCAGTGAATTGTCAACAAAGATTTATTTCCTTATTTTTATTTATTTATTACAAGGATAAGTAGGAGAG
CAGTAG---GGAGCAAGAAAGAAGACAGC---------------------------------------------------
----------------------------------------AGTATCTTCCGTGGACGATTCCATTCGCCCCGGCCAG--A
ATGACCATTCTACCCTCCGCCCCGGCCACCTGAACCGTCTCCTCCTCCGGTATAAACGCGGCACCAGCACGCAAACGGCA
CCACCATCTCCATTCCCACTCCTCCT---ACCACCTCTCCGTCGTTGTGGATCTGTGCGGGCGAGGCCGGGGTCGATCGT
GCGTGCTGCATCGCGTGCGGGGAGAGGGAGCTTTC-------GACTGGCGGCGCCGATGGGGTCGTCTGCGGTGCAGAAG
GAGGCCGTCGTCCTTAACGGCGGCGGCGGCGGGGCGGGGGAGGACCACCGGCTGCGGGCGCTGGCGGCCAGGACGGTGAC
GGACTCGCTCAGGGCGGCCGTGGCCAGGTCCAGCTCGGCGGAGAAGGCGGCCAGGCTCGAGGAGTGCGCCCGGAGCCTCG
AGGCCGAGAAGGCCAAGATGGAGGTCTTCCGCCGCGAGCTCCCCATCAGCGTCCACCTCATCGCCGACGGTGCGT-CC-T
CCGCCCGCCCCGCTCTCGCAAGTCGCAAACGGTTCCAGGTTTATTGAATTGTTTGGCTGAGTTTTATCTTTCTGCCGTGT
TGGGTGCAGTGATCGAGTGGCTGAAGGATGAGGTGGCGCAGCACCGGAGACCCGCGCCGGATCAGCTGCTCGCACCGGC-
-----------GCCGGCGCCTGCACCGCCGGCAAAGAGGAAGGCGGAGGGCGTCAAGACGGAAGCAGACGCGAGCGACAA
GCGTAGCTGGATGAGCTCCGCGCAGCTGTGGACCTGCGGCAGCCACAGCAGCACCAGCAACAGCAATGGCGACAGCATCA
AGAAACAGGCCCAAAAGGTAGAGGCATGAAATGAGAACTATTGGAACACCGAAAGGAGATGTGGTCAGTTCAAATTATCA
AATATAAAAACGAGGTGGAATTTTCTGGCGGTTTATTTATAACCTGTGCTTAATTAATCATGCTAACTA-GATAATTTAA
TTAAGATTGTTTTGCAAAGGGAGAAAAGTATAGT---ATAATGTCATCAAGAACAAAAAATACTAAAAGTTG----TATG
ATGTTCAAGAATGAGGGCGAATCGTTAAACTATGTGTCACTGAAAAACTAGGAAACTTTACAGCTCGTCTCGTCAGTGAA
AAGT-GGGAAATTTTGTGCTAGCAAACTAGAAAAAAGAAGGATAAAGTAGCTCTTTCAGCTCATTTGCAGTTTTCATTTT
GGAGATTTTTGCACCACAAATATT------CCAAGATGGCTTGTCTTGCTGTCTTCAGATCATACT--TTTTTGGGGCGG
GTTTTCAGATGTCAATGTTTTCTTCAAAAAGATGTCAATTTATCCTAACAGATTTTGCATCCCATC------ACAAGAAC
AATCCTAATCTCCTTAGCTCATATTCGGAACAAGTCAATTTCAGATACCATATCTGTCTACCTGTTTCTTGTTTCTAACT
TCAGTTGTCAATTC-AATTGCATCAGGTGTCCAATGCATTCATGCCACTGAATGGCTTGCCAACCTTAGCAAAATCATCG
GAGAGACCAGAGGCGGCGGCCATGGCTGTCCCGGAGCTGTCCCTCTCATCTCCAGCGATCGACGCCCCCTGCCCGACCGC
TCCGAGTGCCGACAGCAGCGCCGTCACGGACGCTGGAGCTCAACGCGAGCAGCAGTCGGCGCAGCGGAAGGCCAGGCGGT
GCTGGTCGCCGGAGCTGCACCGCCGGTTCGTCGCCGCGCTCCAGCGCCTCGGGGGCCCGCAAGGTGGGGGTTGAGCAGTT
TGTAGACCACATTGTTTGTTGGAATGCTTTGAACAATTAAGACATGTTCCTCGTGGTTGGTGTGCTGAAATCTTGCTTTG
CTGTTGATGCAGTGGCCACTCCTAAGCAAATCAGGGAGATGATGAAGGTGGATGGGCTCACGAATGATGAGGTCAAGAGC
CACCTGCAGGTTTGTTCTTATTAACTTCTGTCTGTTCATCAGGCTAATCTACA--------ATTATCCATGTTTCCAACC
CCATCTACATTGGAACATTTACCAGAAATACAATTCTCTTCCTGCAGAAATACAGGCTGCACACACGGCGAGCATCCGAC
GGCGACCAGCAGCAGTCGGCGTCGGCCGGGCAGTGGCCACGGCCGGAGCAGTACACCACGTCG-----------------
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-------------------------------------------------CAGCACAGCTCGTCGCAGTCGGGCTCGCCTC
AGGGGCCGCTGCAGCTCACCGTGTCGAGCCGGGGGATGTCGGTGACCGTCGGAGATAGCTGCGATGGCGGCGAGGAGAAC
GAAGAGGAGGATGGCAAGTCGGCGAGCTACAGCTGGGGGATGCAGCAGAAGGGCACGAAGGCTTCGTCGTCGTCTTGAAC
ACCAAGAAACACATGTGTGGAATTTTCAGAGGCACGCTGCACAGCAACACCAACACACTACTGAGGGTTCAGGATTGAGG
CTT---TT----CTTCTTTGTGTACAGTCGATGAGAGATTATGAGATTGAGAGGTGTGTTCTTTTTGAGCTGGAATGTGC
CGAGAGTTAACTGAACTGACGTGAGTCGTTGGGTTATACGTACTGTATTAGAGATATGAGCTACTATGTTATTAGCATTC
TATACAACTTTTGGTTAAAA--TTGGGTGACGATCTGTCGTGCGTGCACTCCATGGCATCCACGAGGA-GAGCTCACTGC
CAATTTTCCGTGTGGCAGCAGAGCCTTCGATCTTCATCCTATGCTACAACACTAATATGGAGTAAGTTTGGAAAATCCAT
ATATTGGTGGCGCGATAAACCAAGGGTAATATCACTAGATGTCACATGCTGTTAGTGAACATAACATTACTATGTTCTAA
TATTTTTTTTAGAAAGGGGGATTACCTCAA--GCCTCTGCATCATTATGATGTACACATTTGTATCTA------------
----------------TTATATCTAAATAGAAGCCCCCTACTATTTGATTTCTCTTGGCATGTAGGCCATCCACATCAGC
GATCAACATGTAGCCTTCCACCTAAGCAAATTTGCCACCTCAACAGTTCTATTTGTTTTTCTTTTTCAAATAATGAACCG
CCTACTTTTTTAACCCCGTCACACTGTTTGCTGCCCCTTCCACTT-----------------------------------
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>chr5A_1
GAATCTTCCACCCATCAGCCGTCATCCGGCCCCTCCATCTCTTCCAATATTACACACCGGTGAGGGAGTGCTCAGGAAAG
CTTCTCTGAAGAACAGAGCGGGAA------------------------------AAGAAG---AAAAGATTCCGGGGTGT
AGAGGAGGGTCTTGTGTGCTATTATGGGCATCTAGAGGGGGTGTATCGTGAAAGTGTGGGAAAAGATTCCG-------GG
GGACGGGGCACCGCGGGCGCGTGGGAGGAGGCGGTATCTGGACGCCTCTTCTGTGTTACGCGACGAAACGCCTCTGCCTC
TGCC-------------------------CACCGCATGCGGGCAGCATCTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCAATCCTTCCATGCCAAAATAA
ATAAAAGTATATAT-----TACTCAACAAAATCCTACTGTACTCAATAAAATGTTTTTTAGATCATTGTAAAATCTTCAC
TACCGTGTCGTATATACTGGTGTA--------------------------------------------------------
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-----------------------------------------------------------GTGTAGTAGCTCAGTGTTACT
ACAATTCTCAAATAAACCATCTGCTA-AAATAGCTAGAAAAACACTG---------------------------------
----------------TGAATTGTTAACAAAGATTTTTTTCCTAGTTTTTATTTAT---TTGCAAGGATAAGTAGGAGAA
GAGTAGTAGGGAGCAAGAAAGAAGGCAGC---------------------------------------------------
----------------------------------------AGTATCTTCCGTGGACGATTCCATACTGTTCCTTTCCGAA
ATGACCATTCTACCCTCCGCCCCGGCCACCTGAACCGTCTCCCCCTCCGGTATAAACGCGGCACCAGCACGCAAACGGCA
CCACCATCTCCATTCCCACTCCTACC---ACCTCCTCACCGTCGTTGTGGATCTGCGCGAGCGAGGCCGGGATCGATCGT
GC----TGCATCGAGCGCGGGGAGAGTGACC-------TCTGGACTGGCGGCAGCGATGGGGTCGTCTGCGGTGCACAAG
GAGGCCGTCGTCCTCGGCGGCGGCGGCGGGGCT---GGGGAGGACCACCGGCTGCGGGCGCTGGCGGCGAGGACCGTGAC
GGACTCGCTCAGGGCGGCCGTGGCCAGGTCCAGCTCGGCGGAGAAGGCGGCCAGGCTCGAGGAGTGCGCCCGGAGCCTCG
AGGCCGAGAAGGCCAAGATGGAGGTCTTCCGCCGCGAGCTCCCCATCAGCGTTCACCTCATCGCCGACGGTGCGTCCC-T
CCGTCCTCCCCGCTCTCGCAAGCCGCAAACGGTTCCAAGGTTATTGGATTATTTGGCTGAGTTTTATCTTTCTGCCGTGT
TCGGTGCAGTGATCGAGTGGCTGAAGGATGAGGTGGCGCAGCACCGGAGACCGGCGCCGGATCAGCTGCTCGCACCGGTG
CCGTTGCCGTCGCCGTCACCTGCACCTCTGGCTAAGAGGAAGGCGGAGGGCGTCAAGACGGAAGCAGACGCGAGCGACAA
GCGGAGCTGGATGAGCTCCGCGCAGCTGTGGACCTGCGGGAGCCACAGCAGCACCAGCAACAGCAATGGCGACAGCGTCA
AGAAACACGCCCAGAAGGTAGAGCCATGAAATGAGAACTATTGGAACACCGAAAGGAGATGTGGCCAGTTCAAAT-----
---ATTAAAACGAGGTGGATTTTTTGGGGAGG----TTATAACCTGTGCTTAATTAATCATGCTAACTAAGATAATTTAA
TTAAGATTGTTTTGGAAAGGGTGAAAAGTATAGT---ATAGTGTCATCAAGAACTAAAAACACTAAAAGTTG----TATA
ATGTTCAAGAATGATGGCGAATCGTTAAACTATGTGTCACTGAAAAACTAGGAAACTTTACAGCTCGTCTTGTCAGTGAA
AAGT-GGGAAATTTTGTGCTAGCAAACTAGAAAAAAGAAGGAT-AAGTAGCTCTTTCAGCTCATTTGCAGTGTCCATTTT
GGAGATTTTTGCACCACAAATATTCCAATTCCAAGATGGCTTGTCTTGCTATCTTCAGATCATACT--TTTTTGGTGGCG
GTTTTGAGGTGTCATTTTTTTCTTAAAAAAGATGTCAATTTGTCCTAACAGATTTTGCATCCCATC------ACAAGAAC
AATCCTAATCTCCTTAGCTCATATTCGGAAGAAGTCAATTTCAGATGCCATATATGTCTGCCTGTTTCTTGTTTCTAACT
TGTGTTGTCAATCTCAATCCCATCAGGTGTCCAATGCATTCATGCCACTGAATGGCTTGCCAACCTTTGCAAAATCATCG
GAGAGACCAGAGGCGGCGGCCATGGCAGTCCCGGAGCTGTCCCTCTCACCCCCAGCGATCGACGCGCCCTGCCCGGCCGC
CCCGAGTGCCGACAGCAGCGCCGTCACGGACGCCGGAGCTCAACGCGAGCAGCAGTCGGCGCAGCGGAAGGCCAGGCGCT
GCTGGTCGCCGGAGCTGCACCGCCGGTTCGTCGCCGCGCTCCAGCGCCTCGGTGGCCCGCAAGGTGGGGGTTGAACAATT
TGTAAATCACATTGTTTGTTGGAG----------AATTAAGACGTGTTCCTCGTGGTTGGTGTGCTGAATTTTTGCTTTG
CTGTTGATGCAGTGGCCACTCCTAAGCAAATCAGGGAGATGATGAAGGTGGATGGGCTCACGAATGATGAGGTCAAGAGC
CACCTGCAGGTTTGTTCTTATTAACTTCTGTCTGTTCATCAATCAATCTACTACTCCT---ATTTTCCATGTTTCCAACC
ACATGTACATTGGAACATTTACGAGAAATACAATTCTCTCCGTGCAGAAATACAGGCTGCACACACGGCGAGCATCCGAC
GGCGAGCAGCAGCAGTCGGCGTCGGCCGGGCAGTGGCCACGGCCGGAGCAGTACACCACGTCGCAGCACAGCTCCTCGCA
GTCCGGCTCGCCTCAGGGGCCGCTGCAGCTCACCGTGTCGAGCCGGGGGATGTCGGTGACCGCCGGAGACAGCTGCGATG
GCGGCGAGGAGAACGAGGAGGAGGACGGCAAGTCGGCGAGCTACAGCTGGGGAATGCAGCAGAACGGCACGAAGGCCTCG
TCGTCGTCTTGAACACCAAAAAGCACATGTGTGGAATTTTCAGAGGCACGCTGCACAGCAACACCAACACACTACCGAGG
GTTCAGGGTTGAGGCTTTTCTTCTTCTTTGTGTACAGTGGATGAGAGATTAGAGGTGTGTTCTTTTTGAGGTGGAATGTG
CCGAGAGTTAACTGAACTGACGTGAGTCGTTGGGTCATACTGTATTAGAGATATGAGCTATGTTATTAACATTCTATACA
ACTTTTGGTTAAAATTGAGTGACGATCTGTCGTGCGTGCACTCCATGGCATCCACCAGGAGGAGCTCACTGCCAATTTTC
CGTGTGGCACCCGAGCCTTCGATCTTCATCCAACACTAATATTAATATGTAAGAGCATTACTAGTAAAGCCCTGAAATCC
TCAAATCCTTAAAAATAACTGCTTTTTTATAGTTTTCGTTGAAAAAAAGCCGTAGGCTAGAACCCCTTAACCCTCAAACC
CTCAAATTTTTTTAAAGGTCCAACCCTCAAACCCTCTCCCAATCCTCAAAAGTAAGGGTTGGGGAGCAAAACCTACCCAA
CCCTCATTTGGTGGTTATACTCGCGCGGGAGGGAAAAATCCTCCCAACTCCCGCGTCCACGCCCGCGACCGCCGCTGCTA
GTCGCCTCCGTTGCCGGCGGCCGCCCCGTCGACCTCCCGCGCGCAACAACAACGCCGTTCATGGGGAATATTCCGTTATA
ATGGTTGGGTTTGAGGGTTCTGATCTTTGCCCCTGTTTTTCAACCCGTAAAAGTGCACAAAAAAAATCATTTTTGAACCC
TTAAAACGCTAGTGAGGATTTGAGGATTTGAGGGTTCTACTAGTAATGCTCTAAGGACATTTCTAACACCGGTTAGAGGA
GCCGATCCCCAATCCGTTGTAAGAGAGTAATTCTTTTTACCGTGGCCCCGACTTTCTCCCTAAATATACTCCACTGCTTC
TGGCCAAAGGTTTTGACGTGGCATAGGAAATTCGCTCTAGGATCGATCACATCAAACTGCACGAACACACGCGCATAAAG
AACTGATAGCCAAAAGGCCCTTGTCGTGCCCTCTTTTCCCCTTTCTTTATTTCTTTTTTGATTTTCTCAATCGGTATTAA
TCTCAAAGCCACGCCTGTGCTTATATACACGCACAGGCAATACCCCTGTTGCAAATCTACTTGAACTGGACTTCTACTTG
AACCTGACACGGAATAAGCTTTCCTATTCTACTTGTAGATACTGAACACATACAAATGCTAACCGGACTCATACTCCTAG
ATGCATTGGACATAGCCTAGTACTACTAGACCACGCCTAACTTACCTAATCTACTTTCCACGGCAACGCTGATCACCTTT
CACTAATCCTAAACTGGCTCAAACACAACTAGCACCACATACGTGACCACCTCCTAGTAAAACTACCAAAACTAAACTAG
GTTTTGTTTGGATTACCTAACATCTCCGTGCAGAAATACAGGCTGCACACACGGCGGGCATCCGACAGCGAGCAGCAGCA
GTCGGCGTCGGCCGGGCAGTGGCCACGGCCGGACCAGTACACCACATCGCAGCACAGCTCCTCGCAGTCCGGCTCGCCTC
AGGGGCCGCTGCAGCTCACCGTGTCGAGCCGGGGGATGTCGGTGACCGTCGGAGACAGCTGCGATGGCGGCGAGGAGAAC
GAGGAGGAGGACGGCAAGTCGGCGAGCTAAAGCTGGGGGATGCAGCAGAACGGCACGAAGGCTTCGTCGTCGTCTTGAAC
ACCAAGAAACACATGTGTGGAATTTTCAGATGCACGCTGCACAGCAACACCCACACACTACCGAGGGTTCAGGGTTGAGG
CTTTTCTT----CTTCTTTGTGTACAGTCGATGAGAGATTATGAGGTTGAGAGGTGTGTTCTTTTTGAGGTGGAATGTGC
CGAGAGTTAACTGAACTGACGTGAGTCGTTGGGTCATAC----TGTATTAGAGATATGAG---CTATGTTATTAACATTC
TATACAACTTTTGGTAAAAA--TTGAGTGACGATCTGTCGTGCGTGCACTCCATGGCATCCACCAGGAGGAGCTCACTGC
CAATTTTCCGTGTGGCACCCGAGCCTTCGATCTTCATCCTATGCTACAACACTAATATTAA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>SNPs
---------S-----------------------------------------S---S---S-----SS-------S-----
---S-S-SSSSSS---SS-------------------------SSS------S---------------------------
--------------------S------------------------S-------------------------SSSSSSS--
--------------------------------------------------------------------------------
----SSS---------------------------------------------------------------S-----SSSS
S------S----------S------S-SS---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S--------S-S------------S-SS-------S--------------
-----------------------------SS-S-SSSSS--SS---SSSSSSSSSSSS----------------------
----------S-------S-------------------------------------------------------------
-S----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------S---------------
-----------S------S-------------------------------------------------------------
--------------------------SSS---------------------------S--------S--------------
------------S-------S-----------S-SSSS------------------------------------------
--------------------------SS----S-----------------------------------------------
S---------------------------------S-------S-------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------S-----
-------------------------S------------------------------------------------------
-------------------------------S-----------------S------------------------------
---------------------------S----------------------------------------------------
----------S----------S-----------S----------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------S-SSS-------------------------------SS-SSSSS----
----------------------S-------------S------------S------------S-----------------
----S------------------SS---------------------------------------S----S----------
-----------------------S------------------------------------------SS-----S------
-----------------------------------------------------------------SSSSSSS----S---
-----S------S-------------S--------------------S-S--------------------------S--S
--------S-----S-----------------------------------------------------------------
------------------------------------------S-------------------------------------
------------------------------------S---------------------------------------S---
-------------------------------------S--------------S------------------------S--
S------------S-----S-----------S----------S------S------S-----------------------
--------------------------------------------------------------------------------
-----------------------------S---------------------SSSSSS-SSS---------------S---
------S---SS--------------------------------------------------------------------
-----------------------S-----S--------------------------------S-----------------
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---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
-------------------------------------S-----------------------------S------------
--S--SS----SS---SSSS------------------------------S-SSSSSSS---------------------
--------SSSS------------S---S-S------S--S---------------------------------------
--------------------------------------------------------------------------------
----S---------------SS----------------------------------------------------------
---------------------------S----------------------------------------------------
---------------------------------S-SSS-SS----------------S----------------------
-S------S---------------S----SSS---S-----------S----S------S--------SSSSSSSSSSSS
SSSSSSSSSSSSSSSS------------------S----------S----------SSSSSSSS----------------
----------------------S--------S-------------S-----------------S---------SSS--SS
-----------S----------S--------S-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS
>forward_391
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------CTTTTCTCCGACTCCCACCC---------
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----------------
>reverse_1970
--------------------------------------------------------------------------------
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-------------------------------------------------TCGTCAAGACGGAAGCAGAC-----------
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----------------
>forward_1417
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TCCGTCGTTGTGGATCTGTC-----------------------
--------------------------------------------------------------------------------
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----------------
>reverse_2554
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------TGTGGCG
GTTTTGAGGTGT--------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------
>forward_2102
--------------------------------------------------------------------------------
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--AAACACGCGCAAAAGGTAGG----------------------------------------------------------
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----------------
>reverse_5417
--------------------------------------------------------------------------------
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--------------------------------------------------------GAGGGGTTCAGGATTGAGGC----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------
>forward_3292
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------TTCCGACC
ACATGTGCATCA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------
>reverse_6244
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---CATCGTGCTAGTGTTTCGCG---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
