>input_sequence_32890
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-----------------------------------------------------------ATGGCGGCCGCGACCTCCTCC
TTCGCCACGCTCGTGAGCTCCCTCCCCTCCTCCTCCTCCTCACCACTTCTTGTCGGACCCGCCTGCT----CTCCTCCTC
CTCCGCCTGAATCTTGTGCTGTGCGTGCTGTTCTTTCTTGCAGGCCATCGCCCGCCCGGCGGCGTCGGGGGCGGCGGCGC
AGAGGGCGCTCCTCGCCTCGAAGGTCCCCTCGTCGGCCCTCTCCCTCCGCGGCGGCCGCGTCGCGTCCCCGGCCCTCTCC
GTCTCCCAGCAGAGCCGCGCGCGCTTCGTCGCCTCCGCCAGCGCCGAACCCTATGTAAAGATTCCCCATTTATCTATTTT
TATCTATATATCCGGGCGCTGGGGCCGCAACCTATGTGAAGCCTGCATATCTAATACCGAATTGCAATC---TGGTAGAC
ATGGCGTATGTGCCTTTGGAGGCGAACTCCGACTCGACGTCGC---------------AGTATTATT-------------
--------------------------------------------------------------------------------
-------------------------------------------------CATGCCATGTTTTTGTGTTAGT--CCATTAT
AGGTTCAGGTAGTGTTAGTCCCCCGCAGTCTGAGGAATCAAATGCGCCGCTGTTTCTATCTGGGCGCTGTGGCCGCTACC
TGTGTAAAGCCTGCATATCTGGC--ACCGCTCCCTGTTCTGTCAGGAAGCTGAGTTGCAATCTAATAGATATGTAGTTTG
CGTTTGT--------TTGTGAACATCCACACTATTCTGTATGTTATTTGGTAGCTGTAATTTTCATGAGAAAAATCTGGT
CACTAACTGATAATTTTTTTTT-----TGTGTGAACAAATTTGCAAGTTGAGGTTTTATCATCACT---------TATGA
TAACCGTCGGGTTATGCCAGTGTTAGATGCAGATATTACCATACATTGGTATGGCATGTGTTAGTGTTTAGTACATTATA
TGGCCCAGTTAGTTTTAGTCGCCGGCTGTCTAAGGGAACAAATGTGCCACTGTATGGTTTAAACAATATGCCGCTTTTGT
GCTTGCACTGTTGTATGTCTTTTACCTTATTATAGATGTCATGCATTTCATGGTGTTTGAAGCTGTTCTTTCGTCATGCA
TTGCAGGCACCTGAGCTTCAGTCCAAAGTTACAAACAAGGTGTACTTTGACATAAGCATTGGCAACCCTGTCGGGAAGAA
TGTTGGAAGGATTGTCATCGGGCTCTATGGGGATGACGTTCCACAAACCGTTGAGAACTTCCGTGCACTCTGCGCTGGTA
GGAGGGACTGCTGGAGCCATGTTCTGTTATCCCATCTTCAAGAATTAATTCTGATGAGGTGTATGAGCAATTTTTCTTTT
TTTCTTTTGTCCAGGGGAGAAAGGGTTCGGATACAAGGGATCAAGTTTCCACCGTGTCATTAAGGACTTCATGATTCAGG
GAGGAGACTTTGACAAGGGCAACGTATGTGTTTCCTACCTTCGTCTATTCTTGTTTGTTGCATGTGCATCCTTATGCCGT
ATTACAGATTGCATTAAGAAAAGCTAAAGACTATCAGTTGTTACCATGCAAATACCTTTGCTTACAAGATTGAACAGATA
CATGTGCTTATTTGTTTTTTGCACGAATGTACCTGTTTCAGTTTGTTGATAGTTATGCTA--------------------
-----------------------------------GCTGTTTAAGCATTATTTTACGGACCAGAGGGACTGGGGGAGAAG
GAAAGGGAGTTTAGAACCTT-----TACTACTAGCTTTGCTCGTGTACCTGCATTCAATTTGTTATGGTGCTGCATTTTG
ACCCTGGATCTTATCCATGTTTGATTGTCATTAATCACTTGCACAAGTGCATCCTACTCTGTTTTTTTGGTCAGTGGCCT
CGTGGTAAGAATTCAAGGTGATTGTCATTGCGCCATCCTTTCCTATATTGAGCCCATACCTGATTTTGTGTTTCATCTGC
ATT------------------------TGAAGTACTTTGAGACTTCA-GATTGCCTAAAATGAAACATACAGCTTCCAAC
AATGGCATT---AAATAACTAGAAACTGATAA-TTTCAGGGTACTGGAGGGAAAAGCATATATGGCCGCACCTTTAAGGA
TGAGAACTTCCAATGTATGTGTTGCAATGAACCTGTGTCGCACAG-----CTTTGCTTCAGATTATATGCTAACTGATTA
TATGTTATTTAATGTTCTTAGTGGTTCATACTGGACCTGGAGTGCTCAGCATGGCTAATGCTGGACCGAACACCAACGGC
AGCCAATTCTTCATCTGCACAATGAAGGTAATTAATTGTGTACTTCCTGCTACCAGTCAGTCAATTTGAATAA-------
---TAGTACCCTTTTTCTGTTGCT--------GAGTTTGAAGTTCATAATTCCAT-------ATTGAGGTTTCTGCTGCC
TTGCTTGCAGACACCGTGGCTGGATGGGAGACACGTTGTCTTTGGCCAGGTTCTTGAAGGCATGGACATCGTAAGGACGA
TAGAGTCGTCGGAGACTGACAGAGGTGACCGTCCGAAGAAGAAGGTGGTCATTAGTGAGTGCGGGGAGCTTCCAGTGGTC
TGA-----------------------------------------------------------------------------
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>chr1D_1_TraesCS1D01G000800
TTGTTGAAAAAGGTTATGAGAGCGGAGGGATGTTCCGCCTTTCCCTCGCAAATTTTTGTAATACAGCCGTGAACCATATT
CATTCGAATGTTAATAAATCTGAAGTTTGGCATTCACGTCTTTGTCACATTAGTTTTGGTGTTATGACGTGGCTAGCTAA
GTTGGATTTAATCCCGAGTTTCACTTTAGCCAAAGGTTCTAAGTGTCTTTCATGTGTGCAAGCTAAGCAACCTCGCAAGC
CTCGTAAGGCCGCGGAGGAGAGACACTTGGCACCATTAGAACTCATACATTCTGATCTTTGTGAGATGAATGGTGTGTTG
ACTAAAGGTGGAAAGAAAATACTTCATGACATTAATAGATGATTCCACTAGATATTGCTATGTTTATATGTTAAATACTA
AAGATGAGCCTCATTCCCCCTTTCCGCCTCTTATTATTTTCCTCTCTTCTCATTCCCCCTTCCGCAAAACGAGCTCATTA
ATTATATCTCCCCAATAAACACGAGCTTTTTATTCCCCCTTTCGTCGAGTGGGAACGTCGACCTGGGGGCGTCGAGTGAG
AATGCAGTCGCCCCCATGCGCCAAGCAAGTGCCGGTTCGGCTCCAGGCGGCTCTTTTTCGGCGCCCTGGGAACCGAACGG
CTGGAGATGCTCTTACTATATGCAATTGCGTCCGCAATTCGGAGAGAGTGGGATATCTCCATGATAAACGGGTAATACAT
CACCCGTCGGCTCAGATGGACGGCCAATGAGGGCACCGGCACCTCAGATCCGCGCCGGATCTGAATATCCACAAGCCGTC
GACATCCAAACTTCATAGTAGAAGGTTTAACCCAG---------------------------------------------
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------------------------------------------------GGACTTGGGTGCGCAAATAGGATGAACGCAAA
GGGCTCAAATCAACAGCTCCACGGGCATCAGGGGAGTGAGGAAGCAGAATAAAAAGCTCATCCTTTTGGTTATCTCCAGA
GAC---TCCGTCCGTCCCCTCCAACAAATCCCATCCCGAAACCTCG---TCGACCTCCAATGGCGGCCGCGACCTCCTCC
TTCGCCACGCTCGTGAGCTCCCTCCCCTCCTCCTCCTCCTCACCACTTCTTGTCGGACCCGCCTGCT----CTCCTCCTC
CTCCGCCTGAATCTTGTGCTGTGCGTGCTGTTCTTTCTTGCAGGCCATCGCCCGCCCGGCGGCGTCGGGGGCGGCGGCGC
AGAGGGCGCTCCTCGCCTCGAAGGTCCCCTCGTCGGCCCTCTCCCTCCGCGGCGGCCGCGTCGCGTCCCCGGCCCTCTCC
GTCTCCCAGCAGAGCCGCGCGCGCTTCGTCGCCTCCGCCAGCGCCGAACCCTATGTAAAGATTCCCCATTTATCTATTTT
TATCTATATATCCGGGCGCTGGGGCCGCAACCTATGTGAAGCCTGCATATCTAATACCGAATTGCAATC---TGGTAGAC
ATGGCGTATGTGCCTTTGGAGGCGAACTCCGACTCGACGTCGC---------------AGTATTATT-------------
--------------------------------------------------------------------------------
-------------------------------------------------CATGCCATGTTTTTGTGTTAGT--CCATTAT
AGGTTCAGGTAGTGTTAGTCCCCCGCAGTCTGAGGAATCAAATGCGCCGCTGTTTCTATCTGGGCGCTGTGGCCGCTACC
TGTGTAAAGCCTGCATATCTGGC--ACCGCTCCCTGTTCTGTCAGGAAGCTGAGTTGCAATCTAATAGATATGTAGTTTG
CGTTTGT--------TTGTGAACATCCACACTATTCTGTATGTTATTTGGTAGCTGTAATTTTCATGAGAAAAATCTGGT
CACTAACTGATAATTTTTTTTT-----TGTGTGAACAAATTTGCAAGTTGAGGTTTTATCATCACT---------TATGA
TAACCGTCGGGTTATGCCAGTGTTAGATGCAGATATTACCATACATTGGTATGGCATGTGTTAGTGTTTAGTACATTATA
TGGCCCAGTTAGTTTTAGTCGCCGGCTGTCTAAGGGAACAAATGTGCCACTGTATGGTTTAAACAATATGCCGCTTTTGT
GCTTGCACTGTTGTATGTCTTTTACCTTATTATAGATGTCATGCATTTCATGGTGTTTGAAGCTGTTCTTTCGTCATGCA
TTGCAGGCACCTGAGCTTCAGTCCAAAGTTACAAACAAGGTGTACTTTGACATAAGCATTGGCAACCCTGTCGGGAAGAA
TGTTGGAAGGATTGTCATCGGGCTCTATGGGGATGACGTTCCACAAACCGTTGAGAACTTCCGTGCACTCTGCGCTGGTA
GGAGGGACTGCTGGAGCCATGTTCTGTTATCCCATCTTCAAGAATTAATTCTGATGAGGTGTATGAGCAATTTTTCTTTT
TTTCTTTTGTCCAGGGGAGAAAGGGTTCGGATACAAGGGATCAAGTTTCCACCGTGTCATTAAGGACTTCATGATTCAGG
GAGGAGACTTTGACAAGGGCAACGTATGTGTTTCCTACCTTCGTCTATTCTTGTTTGTTGCATGTGCATCCTTATGCCGT
ATTACAGATTGCATTAAGAAAAGCTAAAGACTATCAGTTGTTACCATGCAAATACCTTTGCTTACAAGATTGAACAGATA
CATGTGCTTATTTGTTTTTTGCACGAATGTACCTGTTTCAGTTTGTTGATAGTTATGCTA--------------------
-----------------------------------GCTGTTTAAGCATTATTTTACGGACCAGAGGGACTGGGGGAGAAG
GAAAGGGAGTTTAGAACCTT-----TACTACTAGCTTTGCTCGTGTACCTGCATTCAATTTGTTATGGTGCTGCATTTTG
ACCCTGGATCTTATCCATGTTTGATTGTCATTAATCACTTGCACAAGTGCATCCTACTCTGTTTTTTTGGTCAGTGGCCT
CGTGGTAAGAATTCAAGGTGATTGTCATTGCGCCATCCTTTCCTATATTGAGCCCATACCTGATTTTGTGTTTCATCTGC
ATT------------------------TGAAGTACTTTGAGACTTCA-GATTGCCTAAAATGAAACATACAGCTTCCAAC
AATGGCATT---AAATAACTAGAAACTGATAA-TTTCAGGGTACTGGAGGGAAAAGCATATATGGCCGCACCTTTAAGGA
TGAGAACTTCCAATGTATGTGTTGCAATGAACCTGTGTCGCACAG-----CTTTGCTTCAGATTATATGCTAACTGATTA
TATGTTATTTAATGTTCTTAGTGGTTCATACTGGACCTGGAGTGCTCAGCATGGCTAATGCTGGACCGAACACCAACGGC
AGCCAATTCTTCATCTGCACAATGAAGGTAATTAATTGTGTACTTCCTGCTACCAGTCAGTCAATTTGAATAA-------
---TAGTACCCTTTTTCTGTTGCT--------GAGTTTGAAGTTCATAATTCCAT-------ATTGAGGTTTCTGCTGCC
TTGCTTGCAGACACCGTGGCTGGATGGGAGACACGTTGTCTTTGGCCAGGTTCTTGAAGGCATGGACATCGTAAGGACGA
TAGAGTCGTCGGAGACTGACAGAGGTGACCGTCCGAAGAAGAAGGTGGTCATTAGTGAGTGCGGGGAGCTTCCAGTGGTC
TGAGTTTTAGATGGC---TTATCATCTTCGATCTGCACATCTGGATTTTGTTCTGGACTTGTTACAGGTCTTTCTCCTAC
TAGTTAGAGACT--GCTGAGTTGAAGCCAATATTTCTAATCT-GA-GCATACGGCATTCAACTACTGTTCGGCTGGAATA
AGAATGTGATTGCTTTCCTCAA-CCTGTTTTGTAGCATTGTTCATGATAGATAATGCCTTGTGAATTTTCTGGCAGATCC
ATGAAATGCCTGGATATCTCTTATCTATTTGTTTTTACCTGCTAAATAAATTTCCCTC--GAGCTGCAGAAAAATTATGC
CATGTAAAGGCTCGGTATCATTCCTAGCAATCCCAGTTCCAACACTTGTCATGAGCAG-ATTTAGCAAGCAAAACCTGTT
GATTATCTGAATGATCCGCACAGCAATACAAACTTAGTTTGGCAAACCAACAGAATAT----------------------
---------------------------------TGAATCATGTCATGCTCTACTTTTGCAAGTCACATTGTACTGTAAAG
TCTTGTGTATCTTTACAGGCCACACAGGATTACAAACTTAGTTCAGTGTAAGGCATGCTAATCTGGTTTATGTGTAACAA
CCTGTAGAACATTACAAACTACTCCCTCCGTAAACTAATATAAAAGTGTTTAGATAACTACTTTAGTGATCTAAACGTTC
TTATATTAGTTTACAGAGGGAGTAGTTTCAGAAACTTCCGATGCAATCTAGATTGATGTTTGACATGTAAAGTGAATAAC
ATTAGTTATCTCAAT-----------------------------------------------------------------
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------------------------------------------------------------------------------TT
ATAAAGCTTTGGTGACAGTGGAGTGATATGTGCAACAACAAAGAACTTTGATGAGCAATCCAACAATACACTTATAAGTA
GTGCCAACAGACACAACATACGAAATAATGAGTTGAGAAGCGTGCATGCACTTCCCAAGAAAAGTAAATGCAAGGGTGAA
AACAAACAATGCCATGGTAGCTATAAATAGGCATACACCATCAAGATCCTCCATCATCCACCATTCACATTAGAGAACAA
CACATCAAAGGC--------------------------------------------------------------------
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>chr1B_693
ATATCTCCACGGTA------------------------------------------------------------------
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-----------------------------------------------------------------AAACATGTAATACAT
CACCCAACGAATTAGATGGACGACCAATGAGGGCACCGA-------------CGCCGGATCTGAATATCCACAAGCCGTC
GATATCCAAACTTCA---TAGAAGGTTTAACCATGGGTATATCAATCTCACCCCTGGTTTAACCCAACGTGTTGGTTGGG
GGTAATTAGAGTTAGGGAATGAGAATTGAAGGGGTACCAGACTTCAAATCTATTGTTTGGTTGGGGGTATTGGGAATTTA
CAATGGAGTAGGCATGAGACTTGAGACTCCAACTCCCACCGTTTTATTAACAGGGGAGGGGGTGGGAGTTGGATGGGAAT
TGTTTTAATGAGTCAATCTTAACCCTTCATCTTAACTTTCCTTGTCTAGTCCCATATCAATTCCCATGAACCAAAGAAGG
GAGTATAATTTCTCACGCACCAAACAAAGGATTGGAAATAAAACGACTCATTCTATGTCTAATCTCAATACAATTCCCTC
CTCTAAACTTCCATTCCGTTTCCCAGATATTGCCAAACACCCTACCATGGACTTGGGTGCGCAAATAGGATGAACGAGAA
GGGCTCAAATCAACAGCTCCACCGGCATCAGGGGAGTGAGGAAGCAGAATAAAAAGCTCATCCTTTTGGTTATCTGCACA
GAGTCTTCCGTCCGTCGCCTCCAACAAATCCCATCCCAAAACCTCCTCCTCGCCCTCCAATGGCGGCCGCGACCTCCTCC
TTCGCCACGCTCGTGAGCTCCCTCCCCTCC-CCTCATCC---CCACTTCTTCTCGGACCCGCCTGGTCTCCCTC------
CTCAGCCTGAATCTTGTGGTG---------TTCTTTCTTGCAGGCCATCGCCCGCCCGGCGGCGGCGGGGTCGGCGGCGC
AGAGGGCGCTCCTCGCCTCGAAGGCCCCCTCGTCGGCGCTCTCCCTCCGCGGCGGCCGCGTCGCGTCCCCGGCCCTCTCC
GCCTCCCGGCAGAGCCGCGCGCGCTTCGTCGCCTCCGCCAGCGCCGAACCCTATGTAAAGATTCCCCATTTG-----TTT
TATCTATCTACCTTGGCACAGGGGCCGCAATCTATGTGAATC-----------TTGCCGAATTGCAATCCAGTAGTAGAC
ATATCTTATGTGTCTTGCCGAACTTCCATGCGATTCCGCATGCTGGCTGGTAGCTGTGATATTCATGAGAAATATCAGGT
CACTCACTGAATTTTTTGTGTGAAGAAAATTGCAGGCTGAGGTTTACCGTCACTGCGACGGGCATGCCATTCGTTTATAA
ACATTCTTAGGTTCAGTTATTTAAACATTCTTAGGTTCTGTGCGACGGGCATGCCATTCGTTTATGTTATTCCCCAT--T
AGGTTCAGTTAGTGTTAGTTGCTCGCTGTCTGAAGAATCAAATGCGCTGCTGTTTCTATCTGGGCACTGTGGCCGCTACC
TGTGTAAAGCCTGCGGATCTGGC--ACCGCTCCCTGTTCAGTCAGGAAGCTGAATTGCAACCTAATAGACATGTAGTTTG
CCTTCGGTTGTGTACTTGTGAACATTCACACCATTCTGTATATTATTTGGTAGCTGTAATTTTCATGAGAAAAATCAGGA
CACTCACTGAATTTATTTATTTTTGTGTGTGTGAACAAATTTGCAAGTTGAGGTTTTGTCATCACT---------T----
-AACTGCCGGGGTATGCCAGTGTTAGATGCAGAG--TACCATACACTGGTATGCCATGTGTTGGTGTTTAGTTCATTATC
T---CCAGTTAGTGTTAGTCGCCGGCCGTCTAAGGGAACAAATGTGCCACTGTATGGTTTACACAATATGCCGGTTTTGT
GGTTGCATTGGTGCATATCTTTTACCTTATTATGGATGCCATACATTTCATGGTGTTTGAAGCTGTTCCTTCATCATGCA
TTGCAGGCACCTGAGCTTCAGTCCAAAGTTACAAACAAGGTCTACTTTGACATAAGCATTGGCAACCCTGTCGGGAAGAA
CGTTGGGAGGATTGTCATCGGGCTGTATGGGGATGACGTTCCCCAAACCGTTGAGAACTTCCGTGCTCTCTGCACTGGTA
CGAGGGACTGCTGGAGCCCTGTTCTGTTATCCCATCTGTGAACGATTGCTCTGGTGAGGAATATGACCAATTTCTCCTTT
TTGTA-----TCAGGGGAGAAAGGGTTCGGATACAAGGGATCAAGTTTCCACCGTGTCATTAAGGACTTCATGATTCAGG
GAGGAGACTTTGACAAGGGCAACGTATGTGTTTCCTACCTTCGTCTATTCTTGTTTGTTGCATGTGCATCCTTATGCCGT
ATTGCAGATTGCATTAAGAAAAGCTAAAGACTATCTCTTGTTACCATACAAATACCTTTGCTCACAAGATTGAACGGATT
CATGTGCTTATTTCTATTTTGCA-----------------------TGATAATTGTGCTAGCTGCTTCTCCTTTTTCCTT
CTGAACTGTGGC--TTAGCTATTTGAGTACTCTGTGCTGTTTAAGCATTATTTTACGGACCAGATGGACTGGGGGAGAAT
TAGAGGGAGGTAGTTTAGGTCCTTGTACTACTAGCTTTGCTCGTGTACCTGCATTCAATTTCTTACCGTGCTGCATTTTC
ACCCTGGATGTTATCCATGTTTGACTGTCAATAATCACTTGCACTAGTGCATCCTACCCTGTTTTG-TGGTCAGTGGCCT
CGTGGTAAGAATTCAAGGTGATTGCCACCGCGCCGTCCTTTCCTATATTGAGG-CGTACATGATTTTGTGTTTCATCTGC
ATTTTGATCTACTTATGCATGGCTGGCTGAAGTACTTTTGAAACTTCGGATTGCCTAAAATGAAACATACAGCTTCCAAC
AATGGCATGTGAAAATAACTAGAAACTGACAA-TTTCAGGGTACTGGAGGGAAAAGCATATACGGCCGCACCTTTAAGGA
TGAGAACTTCCAATGTATGTGTTGCAATGAACTAGTCTGTATCATGCAATCTTTGCTTCAGATTATATGCTAACTGATTA
TATATTATTTAATGTTCTTAGTGGTTCATACTGGACCTGGAGTGCTCAGCATGGCTAATGCTGGACCGAACACCAACGGC
AGCCAATTCTTCATCTGCACGGTCAAGGTAATTAGTTGTGTACTTCCTGCTATCAGTATCAGTCAGTCAATGCGAGAAAT
AGCTAGTACCCTTTTCCCGCTGCCGCTCCATCGAGTTTGAAGTTCATATAAATAAATCCCCGATTGAGGTTTCTGCTACC
TTGCTTGCAGACACCGTGGCTGGACGGGAGACACGTTGTCTTTGGCCAGGTTCTTGAAGGCATGGATATCGTAAGGATGA
TAGAGTCGTCTGAGACTGACAGAGGTGACCGTCCGAAGAAGAAGGTGGTCATTAGTGAGTCCGGGGAGCTTCCGGTGGTC
TGAGTTTTATTTAGATGGTTACCACCTTCCATCTGCGCATCTGGATTTTGCTGTGGACTTGTTACAGGTCTTTCTCCTAG
TAGTTAGAGACCGCGCTGAGTTGAGCCCAAAATTTCTACTCCCGAGGCATACGGCATTCATCTACTGTTTGACTGGAATA
AGAATGTGATTGCTTTCCTCAAACCTGTTTTGTAGCTTTGTTCATGATAGATAATGCATTGTGAATTTTCTGGCGGATCT
ATGAAATCCCTGGATATCT-TTATCTATTGGTTTTTACCTGCTAAATAAATTTCCCTCAGGAGCTGCAGGCAAATTATAC
CATGTAAAGGCTCGGTATCATTCCTAGCAATCCCAGTTCCAACACTTGTCATGAGCAG-ATTTAGCAAGCAAAACCTGCT
GATTATCTGAATGATCTGCACAACAATGCAAACTTAGTTTGGCAGACCAACAGATTATTGATCAAAGCTTCGCATGTGTA
CTGTAAAGCCTTTGACATGTAAAGGGAATTTCATGAATCATGTCATGATCTACTTTTGCAAGTCACATTTTACTGTAAAG
TCTTGGGTATCTTTACAGGCCACACAAGATTACAAACTTAGTTCAGTGCAAGGTGTGCTAATCTGGTTTATGCGTAACAA
CCCGTAGAACATTACAAACTA-----------------------------------------------------------
------------------------GTTTCAGAAAC-TCCGATGTAATCTAGATTGATGTTTGAAATGTAAAGTGAATAAC
ATTAGTTATCTCAAT-----------------------------------------------------------------
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------------------------------------------------------------------------------TG
ATAAAGCTTTGGTGGCAGTGGAGCGATATGTGCAACAACAAAGAACTTTGATGAGTAATCCAAGAATACACTTA--AGTA
GTGCCACGAGACAC--------AAATGATGAGTTGAGAAGCATCCATGCACTTCCCAAGAAAAGTAAATGCAAAGATGAA
AACAAACAATGCCATGGTAGCTATGAATAGGCATACACCATCAAGATCCTCCATCATCCACCATTCACATTAGAGAATAA
-ACATCAAAGGC--------------------------------------------------------------------
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>chr1A_826
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-------------------------TTTAACCCAG---------------------------------------------
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------------------------------------------------GGACCTGGGTAAGCAAATAGGATGAACTAGAA
GGACTCGAATCAATAGTTCCACGGGCATCAGGGGAGTGAGGAAGCAGAATAAAAAGCTCATCCTTTTGGTTATCTGCAGA
GAGTCTTCCGTCCCCTCCAAC-----------------AAACCTTCTCCTCACCCTCCAATGGCGGCCGCGACCTCCTCC
TTCGCCACGCTCGTGAGCTCCCTCCCCTCCTCCTCCTCC---CCCCTTCTGCTCGGACCCGCCTGGTCTCCCTCCTCCTC
CTCCGCCTGAATCTTGTGCTGTGTGTGCTGTTCTTTCTTGCAGGCCATCGCCCGCCCGGCGGCGGCGGGGCCGGCGGCGC
AGAGGGCGCTCCTCGCCTCGAAGGCCCCCTCGTCGGCGCTCTCCCTCCGCGGCGGCCGCATCGCGTCCCCGGCCCTCTCC
GTCTCCCAGCAGAGCCGCGCGCGCTTCGTCCCCTCCGCCACCGCCGAACCCTATGTAAAGATTCAGCATTTATTTATC--
TATTTATCTATCTGGCCACAAGGGCCGCAATCTATGTGGAGCTTGCATATCTATTACCAAATTGCAATC---TAGTAGAC
GTGTATCCTTTGCCTTCCGATGCGAACATCCACACAATTTGGT---------------ATATTCATGAGAAAAATTAGTT
CACTCCCCGAGTTTTCGTGTGA---AGAAATGCAAGTTGAGATTTACCATCAGTTACTTCCTTCTGTAATAAACATTAGG
CTCTGTGCA---------------------------------CGACGGGCATGCCATGTGTTTATGTTAGT--CCAT--T
AGGTTCAGTTAGTGTTAGTCGTCAGTGGTCTGAGGAATCAAATGTGCAGCTATTTCTATCTAGATACTGTGGCCGCTACC
TGTGTAAAGCCTGCGTATCTGGCGCACCGCTCCTGGTTCAGCCAGGAAGCCC-ATTGCAGTCTAGTAGACATGTAGTGTG
TGCCTTCGGATGTG-------ACTTCCATGCCATTCCTTATGTTATTTGGTATCTGTAATTTTCATGCGAAAAATCAGGT
CACTAACTGAAATTTTTT------GTGTGCGTGGACAAATTTGCAAGTTGAGGTTTTATCATCACTTACTTATGAT----
-AACCGCCGGGTTATGCCAGTGTTAGATGCAGAG--TACCATCA---------GCATGTGTTAGTGTTTAGTTTATTATG
T---CCAGTTACTGTTAGTTGCCGGCCGTCTAAGGGAATAAATGTGCCACTGTATGGTTTACACAATATGCCATTTTTGT
GGTTGCATTGGTGGGTGTCTTTTACCTTATTATA--TGTCATACATTTCATGGTGTTTGAAGCTGTTCTTTCATCATGCA
TTGCAGGCACCTGAGCTTCAGTCCAAAGTTACAAACAAGGTGTACTTTGACATAAGCATTGGCAACCCTGTCGGGAAGAA
CGTTGGGAGGATTGTCATCGGGCTGTATGGGGATGATGTTCCCCAAACCGTTGAGAACTTCCGTGCTCTCTGCACTGGTA
CGAGAGACTGTTGGAGCCCTCTTCTGTTATCCCATCTGTAAAGGATTGCTCTGATGAGGTATATGACCAATTTCTCCTTT
TTGTA-----CCAGGGGAGAAAGGGTTCGGATACAAGGGATCAAGTTTCCACCGTGTCATTAAGGACTTCATGATTCAGG
GGGGAGACTTTGACAAGGGCAACGTATGCGTTTCCTACCTTCATCTATTCTTGTTTGTTGCACGTGCATGCTTATGCTGT
ATTGC-GATTGCATTAAGAAAAACTAAAGAGTGTACTACCTGTTTTGCACGTAATCGTTTC-------------------
--------------------GCACGAATGTACCTGTTTCTGTTTGTTGATAGTTATGCTAGTTCTTCCTCTCCTTTTCTT
CTGAATTGTATAGTTTAGCTATTTGAGTACTCTGTGCTGTTTAAGCATTATTTTACGGACCAGAGGGACTGGGGGAGAAG
GATAGGGAGTTTAAATCCTT-----TACTACTAGCTTTGCTCGTGTACCGGCATTCAATTTGTTATCGTGCTGCATTTTG
ATCCTGGATCTTATCCATGTTTGATTGTCATTAATAACTTGCACAAGTGCATCCTACTCTGTTTTGTT-GTCAGTGGCCT
TGTGGTAAGAATTCAAGGTGATTGCCATCGCGCCATCCTTTCCCATATTGAGG-CATACATGATTATGTGTTTCATCTGC
ATTTTGATCTACTTATGCATGGCTGGCTGAAGTACTTTGAGACATCA-GATTGCCTAAAATGAAACATGCAGCTTCCAAC
AATGGCATT---GAATAACTAGAAACTGATATTTTTCAGGGTACTGGAGGGAAAAGCATATATGGCCGCACCTTTAAGGA
TGAGAACTTCCAATGTATGTGTTGCAATGAACCTTTGTCACT----CAATCTTTGCTTCAGATTATATGCTAACTGATTA
TATATTATTTAATGTTCTTAGTGGTTCATACTGGACCTGGAGTGCTCAGCATGGCGAATGCTGGACCGAACACCAACGGC
AGCCAATTCTTCATCTGCACAGTCAAGGTAATTAATTGTTTACTTCCTGCTATCAGTCAGTCCATTTGAATAA-------
---TAGTACCCTTTTTCCATTGCT--------AAGTTTGAAGTTCATATAAAT----CCCCGATTGAGGTTTCTCCTACC
TTGCTTGCAGACACCGTGGCTGGACGGGAGACACGTTGTCTTTGGCCAGGTTCTTGAAGGCATGGACATCGTAAGGACGA
TAGAGTCATCAGAGACCGACAGAGGTGACCGTCCGAAGAAGAAGGTGGTCATTAGTGAGTGCGGGGAGCTTCCAGTGGTC
TGAGTTTTATTTAGATGGCTATCACCTTCCATCTGCGCATCTTGATTTTGCTGTGGACTTGTTACTTGTCTTTCTCCAAG
TAGTTAGAGACCGCACTGAGTTGAACTCGAGATTTCTACTCT-GAGGCATACGGCATTCATCAACTGTTCGACTGGAATA
AGAATGTGATTGCTTTCCTG-AACCTGTTTTGTAGCATTGCTCATGGTAGATAATGCCTTGTGAATTTTTTGGCGGATCC
ATGAAATGCCTAGATATCT-CTATCTATTCGTTTTTATCTGCTAAATTTCCCTGAA----GAGCTGCAAACAAATTATGC
CATGTAAAGGCTCGGTATCATTCCTGGCAATTCCAGTTCCGACACTTGTCATGAGCAAAATTTAGCAAACACAACCTGCT
GATTATCTGAATGATTCGCGCAACAATACAAACTTAGTTTGGCAGACCAACAGAATATTGATCAAAGCTTCACATGTGTA
CTGTAAAGCCTTTGACATGTAAAGGGAATTTGATGAATCATGTCATGCTCCACTTCTGCAAGTCACACTGTACTATAAAG
TCTTGTGTATCGTTACAGGCCACACAAGACTACAAACTTAGTTCAATGCAAGGCATGCTAGTCTGGTTTATGCGT-----
-------------ACAAACTA-----------------------------------------------------------
------------------------GTTTCAGAGAC-TCCGATGCAATCTAGATTGATGTTTGACATGTAAAGTGAATAAC
ATGAGTTATGCCAATCTTCTATATCTAAATAGCTAGCCCCCATTAACTATTTCTCTCAACATGCAAGCATGCCACATCAT
ACGCACAACATGCATGAGAAGAGCCTCACCTCCACTATCATATGTCTCTCAACATGCAAGCATGTCACTTCATCATGAAA
CATGCATCATAACATGCAAAAATACATGAGAATTTTATTATATCATGCTATTTATATTTAATAAACATTTTACAACAAAT
ATTCATGTTTCAAACGACGAATCAAATAGAAATATGTTGCAAAGTATTCCCACAACAACGTGCGGGATATCATCTAGTTT
ATAAAGCTTTGGTGGCAGTGGAGTGATATGTGCAACAACAAAGAACTTTGATGAGAAATCCAAGAATACACTTATAAGTA
GTGTCCCCAAACACAACATACGAAATGATGAGTTGAGAAGCATCCCCGCACTTTCCAAGAAAAGTAATTGCAAAGATGAA
AACAAACAATGCCATGGTAGCTATAAATAGGCATACACCATCAAGATCCTCCATCATCCACCATTCACATTAGAGAACAA
-ACATCAAAGCCAAGCAAACAATATCCAACATAAATCAACTATGAAGATCTTCCTTGCGCTTGCCTTTCTTGCTGCTATG
GCTACCAACGCCATAGTCACCACTGATATGAAACTACCCCAGTTGCAACCACAAAAATCATTTTCACAACAACAACCCTT
TCCACAACCACAACTACTCTTTCGAGAGGAGCAATCAGCTCCACAACAATAGCCATTTCCACCACAACAGTTACCATTTG
GGCAACAACAATTTCCACAACCACCACCCTATCCCCCACCGCAACAACCACTCTATCCCCAACCACAACAACAACCATTC
CCACAGCAACATGAACAACCAGCTCAGGAACAACCATTTGTACAACAATTGAACCCCATGTAGGGATGTATTCCTACAAC
AGTGTAATCCTGTGACAACTTTATCATTTCTCCAGTCACAGGTGGTGCAACAAAGCAGATGTCAGGTGTTAAGGAAGCAA
TGTTGTCAGCAACTGTCACGTATTCCCAAGCGATCACAGTGACATGCCATCCACAATGTTGTGCACGCCATTATTTTGCA
ACAACAACAACAATTGGGAGAAGGTACTTTGGTCCAACCTCAACAACAACTACTAGGTCGAGGTTCCATCCAACCTCAAC
AACATCAGTTGAATCAGGGTTGGATCGACACAATAAGGACATGGGTGCTTCAGACCCTACCGACAATGTGCGACATCCAC
GTCACACTGTACTGCTCTATCACCTCATCAGCATAGCAACGTCACTATATATACTAGCATGAGTGGCTAATGAGAAGACA
AGAGATCTCATACTCGATAGATGGACTACCGTTGTTAGTCGATGGTCCTATCCATGCAGCGCCGAAAAATGAATAAAAGA
AAAAGATATATATTCTTTGATGCATATAGATTATCTATTGGTGTTCCGTTCATGAACATGTTGAGTTGTTCGTCCAAAAA
ACAATATATGCATTAATTAGCTTTCTATGTAGCACATTTGTAAAAATTGAACTGAGCCGAATCTCTATTAAGGTAATTAT
TTAAGGAGTAAGGATTAACAAGAAACTAACTCTTTAATGGCAAGCATTATGGGTTTTGACCTTCAATTGGTCCATGTAAG
ATTTCTTTTGAATGTTGGCGGGAGAGATGCCAATCCATTGATTAGAAAGGGATATTACCGGTAACACCCCCAAAGGAGGA
ATGCACCACATAAGGCAAGTGTCAAACAAATAAGAAATGAAAAAGGTCTGCTTGAGTAATCAAGGAAAGCTAGGAGAAAA
CCTAAACAAGACCTAGCTAGACTAGACCTAAAGCTGCACAAAACATACAACATGCCAGAAAGCTAACACCCCAAAACATA
CATGGCTGATCACTCAAGCGCCTTCTCTGCTACCAGAGAGCACACCAAAACCGCTGTATCAATATGGGATCCCATAGTTA
CCATATCGATGAAGCTTGATGATATCGAAGAGGAACACTATGTCCGATAGAGCAGACATATGCCACTTCAATCCCGTGAG
GTTGGCGAACATAGTTCGCCTGACTGACCTTGCATGTGGAGGTCACGCAAGCTGCCGCGGACCACTTCCACGAGTCTTGA
GTCCATCCTGCCGAGTCTAACGATCCAAGACAATGCCCGAAGAGGAAACACGGTGCCATGCAAAGCCAGAAGCGTTGTCA
TCGTCCCATCCAGGAGATCAGATCTAGGTTTTCCCTCGCAGTATGCTAGGAGATGGGGGAGGACATCAACATCAATGCCT
CCAACAAGGGAACGATGCCCGTAGGCACCACTATCGATGACTATGACTATAACCAGAGTATGGCTTTTGCTGGTAGCCTA
ACCCTCCCAAACCCAAAACCCCGAGAACCTATCCAGCCTAGAACCTCCATGACACGTGGTAGGACATGAGGCCTCAGACT
TGTGACACATGAAGGACCCCTTCGTCGTAGGCCCGCAGAAATCCAGACCGGGTCTTGGAGTTGGCAGACCTCATGCCTTA
GGCAGATCCGGAGCACCGCAGGAACCTCCCTGTGCAGATCATCTCTATGCTCACACTAGAGACGGCGAGAACCGACCGCC
TGCCCTTTGGGCAGCCGATCGAAACCACAAGGCCATCGGAGTCCTCACGCCGCCACCCATCAGATCCGCGTTGGGAGCGC
CGACCACGCGCCTCTACACGATGATACGATCCCCACAACCATAGCTCATGACACCACTTATTATAAACTATGTAGTAGTT
CATTGCAGAAAACTAGACGGGACACACGATGTTTTCTTAACAAGGTTCAACATCGTGGTTAATCCCCATGGCATGATTAC
GGGCGCACCTCCCCATGTACCATCACATATACAAGTTGACGATAAGCCCAGACAGCACTCCAACCACCTTTGCCATGCAC
CCCTGCCAAGTGTGCGAACCGTCCCTCTCGTGATCTCTGTCATAGCGTAACTTATGCCTAGTATATTTTGGCTATGTGTG
GTATCTTATATAATAGTACTCGGTTACACGTGTCTAACTGAAACACCTAATGCTCCACATACTCCAAGTCTAATAGTAGC
CCAATACACATATTCGACACAATTTTAAAAGATGCCCAATTGTTGGCCAGCAAGCTTCCCTCGGTCTCAGTATCATGGTG
GACACCATGGCCACTGCTGAATGTTGTGCCCAGCAAGTCAAGGATACAATAGTGTTGAAGGCATGGCCTATGCACCTGCC
TATTATTACAACAAACCCAAAGAAGAAAACAACACTTAATTAGCAGAGGACATGATTAATCTAACATTCCTTAACATGTT
TTTTTTGCTTTGTTCATGATAGATAATGCCTTGTGAATTTTCTTGCGGATTGATGAAATGTTTGGATATATCT
>SNPs
S-S-SSSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----SS---------
-----SS--SS-S---------S---------------SSSSSSSSSSSSSS----------------------------
--S------------SSS--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------SS--
---------------------------------------------------------------------------S----
--S----------------------------------S-------S------S---------------------------
---------------------------------------SSS---------S-------------S--------------
-----------------------S----------------------------------------S-----S---------
------------------------S------------S------------------------------------------
-------------------------------------------------------------------------S------
-------S----S----S-S----------S-----------S----------S-------------------S------
---S-S----------SS--S------SS-S----S-SS-S------------------SSS-S--S-------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S---S-------------SS-
--------S-----------S-----S--------------------S-----------------S--------------
--------------S------------------------S-------------S---------------S----------
------S------------------------S--------------------------------------------S---
----------S-S-----S---------------------------------------------------------SSSS
S-----S--------------------------SSS---------S--------------------------S------S
-SSS---------S------------S----------------------------------S-----------S------
-S-----S--S--S----------------------------S-----------------------------S-------
--------------------------------------------------------------------------------
S-----S-----------------S-----------------S-----------------------S------S------
S-----------------S------------------SS--SSSS-SSS-----------S-----S------S--S---
--SSSSSSSS----------------------------------------------------------------------
--------------------------------------------------------------------------------
---S-------------------------------SS----------S--------------S------------S---S
-------------S-S-----------------------S----------------------------------------
--------------------------------------------------------------------------------
--S----------S-S--------------------------------------------------S-------------
-----------------------------------------------------------------S--------------
------------------------S---S-----------------------SS-----S--------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S-S--S-----------------------------------
---S----------------------------------------------------------------------------
---------------------S-S----------------------------S---------S-----------------
-----------------S------------------------------SSSSS-S----------------------S--
------------------------S-------------------------------------------------------
----------S---------------------------------------------------------------------
---------SS-S-S---------S----S------S-------------S-S--------------------------S
-----------S-------------S----S-------S---------------------S----------S--------
--------------------------------------------------------------------------S-----
-------------------S---------S----------------------------------------S---------
------------------------------------------------------------------------------S-
----------------------S---------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------S---------------------S-----------------------S-------
--S------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS-----------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S----------------------------------------S-------S----------------
------S-------------------S--------------S-S-----------------------------S-S----
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
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-------------------------------------------------------------------------
>forward_421
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-AGATGAGCCTCATTCCCCCT-----------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2089
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--------GTAGTGTTAGTCCCCCGCAG----------------------------------------------------
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>forward_733
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------AATACAT
CACCCGTCGGCTC-------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3347
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------------------------------------------------------------------GGTGCTGCATTTTG
ACCCTG--------------------------------------------------------------------------
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>forward_1544
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----GCCTGAATCTTGTGCTGTGC--------------------------------------------------------
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>reverse_3465
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------------------------TCATTGCGCCATCCTTTCCT------------------------------------
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>forward_2571
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------CGCTTTTGT
GCTTGCACTGT---------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4091
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----------GGAGACTGACAGAGGTGACC--------------------------------------------------
--------------------------------------------------------------------------------
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>forward_3722
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----------------------TGCAATGAACCTGTGTCGCA--------------------------------------
--------------------------------------------------------------------------------
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>reverse_5402
--------------------------------------------------------------------------------
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-----------------------------------------GTGCATGCACTTCCCAAGAA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------
