>input_sequence_32661
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---------------------------------------------------------------ATGGAGATCGCCGGGGA
CGCCGCCGCGAGCGGTGGCCGCGGCATCCGCGACCTGCCGCCGCTGAAGCGGTTCAAGTTCGTCGGCTCCAACCTCGGGT
CAGCGCCGTGCCCGCCGCTGCCCGCCAAGAAGCGCGCGCTCCCGCCGCTGCCGGAGGCGGCGCCTGCCCCTGCCTGCCTT
CCGGCGAAGAAGCGCGCGTGTGCGCCACCGCTGGATGCCATCTCGCCGGCGTGTCTTCCGGCCAAGAAGCGCGTCCACGT
GCGCCCCCCTCCGCCGGAGGATAACGCTCCTCCTCCCTCCGTCCCGTACAAGAAGCCTCCCCTCGTTCCGGTGAAGAAGC
GCGTCGAGGTGCCGCCGCTCCCGCAGCGCGTCGTCAACGCCAATCCATTCGTTCCGGCCAAGAAGCGCGTCCAGGCGCCG
TCGCCCCCGGAGTACGCTGCTGCTCCGCCCCCCGTCCCGGTGAAGAACCATGCCCAGATGCCGCCGCGCCCGGGGAGCAT
CGTCGCCGCTACCCCAGGCGTCCCGGCGAAGAAGCGTGTCCAGGCTCCATCGCCCCTGGAGCACGCCGCCCCTCCCCCGA
CCGTTCCGGCCAAGAAGCGGGTCCAGGCGCCGTCGCCCCTGGGGATCGCCGCTGCTCCTCTCTCCGTCCCGGCCAAGCAG
CGCGTCCCTGTGCGGTCGTGCCCGGAGGGCGTCGCCACCGCCCCCTCCGTCCAGACCAACAAGCGCGTTCCGTGGCAATC
GCCCCCGGAGGACGCTTCTGCTCGGGCCCCGGTTTGCCTCCCGGCGAATAAGCGCGTGATGTCGCAGTTCATCCCGCCCT
CTCCATCTTCATCGATGAAGTCAGATGGGGCTCGCGTCGGCGCCCTCAAAGAAGCCTGTCCTCAAGGCTTCGTTGAAAGC
GGCGCCGCCACCTATCCTAAGGCGGCGAATGGTGCTGAAGCGTCCAAGATGACCAACAAGCCCGACGAAGTCAAGGATCA
GGTGTTCCAGAAATCCCGCAGAACAAACACCGCAAAAAGAGCGAGTGGCCTGCACTGCAAGAAGCTCTCCGATGTCATCA
ATGGCATGCAATCTGAAGTTCAGTCCGAAGAGCTCAAGAAATTCGAGCCAGCGAGTGATCTGCACTGCAAGAAGCTCTCT
GAAGTCGTCGGTAGCATGCAGTCTGAAGTTCATGCCGAAGAGCCCAAGAAGTTCGAGCAAACTAGTGATCTGCACTGCAA
GAAGCTCTCCGATGCCGTCAATGACACACAATCTGAAGTTCAGGCCAAAGCGCTCAAGACATTCGAGCAAACTAGTGATC
TGCACTGTAAGAAGCTCTCTGATGTCGTCGGTAGCATGCAATCTGAAGTTCAAGCCGAAGACCTCAAGAAATTCGAGCAA
ACTAGTGACCTGCACTGCAAGAAGCTCCCCGATGCCGTCAATGACGCACAGTCTGAAGTTCAAGCCGAAGTGCTGAAGAA
ATTCGAGCAAACGAGTGATCTGCATTGCAAG---CTCTCCAATGCCGTCAACGGCGAACAATCTGAAGCTCAAGCCGAAG
TGCTTGAGAAATTCGAGCAAACGGCTGATGTGCACTGCAAGAAGCTCCCCAATGTAGTCGATGACGAACAGTGTCAAGTT
CAAGCGGAGGCGCTCACGAAATTCGACCACGCGATTGTTCCTGAAGTGGCAGCGCCAGCACGCGAGGAGGAACACACGCA
GGAAGACGAAGAAGTGGCGGCCGAGCGAAGGCAAGATGCTCTCGCGGAAGAAGAGGACGACGGCATCCTCTGCGCGGTCT
GCCGAAGCACCGACGGCGACCAGTCGGACCCCATCGTGTTCTGCGACGGGTGCGACCTCATGGTGCACGCCACGTGCTAC
GGCAACCCGCTGGCCCAGTCCATCCCGGACGGCGACTGGTTCTGCTCGCTCTGCTCCGTCAAGCCC---GCCGCCGCCGC
GGGGAAGAAGGGCAAGCCGGCACGCCCGCCCTGCCGCCTCTGCCCGGCGAGGGGCGGCGCCATGAAACGCACCACGGACG
GCGCGTGGGCGCACATCGCGTGCGCGCTGCTGGTGCCGGAGGTGTTCTTCGGGGACCCGGACGGGCGCGAGGCCATCGAC
TGCTCCCTCGTGCCCGGCCGGCGGTTCACCAGGCACTGCTACATCTGCGAGAGCAGCAGGGGCTGCGCGCTCGAGTGCTC
CCAGCCCAAGTGCGACCTCGGGTTCCACGTCTCCTGCGGCCTCAACGGCGGCCTCTGCATCGAGTACCGCGAGGAGAAGG
GCGGCGGCGTCGTCGCCGGCTTCTGTAGGGAGCACACCAAGCTCTGGGAGAAGGTAAAATCCTGTGATTTTCTTGTCATT
GTCTTGTTTGAGCTTGCTTCAGCGATCTGATGTGAAACTTTTTGGTTGGATTTGTGTATGTGTTGGTGCAGCAACAACTG
ACTGGCAAGTACAAGATTGTTTCTAGAGGGCAGCAATGA-----------------------------------------
--------------------------------------------------------------------------------
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------------------
>chr3B_1_TraesCS3B01G133100
GGTGATAACAAACATGAACAATTGTTCAAACTCACATGCAAAGTTTCTCAAAGGAATGACATTCGCCTT--TTCCCCATC
TTATTTGTATATATTCATCTTCAATCATGCCTATACAGCGAACACAAGAAAAAAGTATTG------CATCCAGATTCGTA
GACCACCTGGCGACAAGTACACGCACTGAAGCGATCCAAAGGCGCGCCGCCGTCATCGCCCCTTATTCACCGGAGCCGG-
-ACAACTTGTTGTAGTAAACAGTCGGAAAGTAGTTGTGAAAACATTTTATTTTTGGTCAAGAATTTGATGAACTTCATTT
TTTTTCGCGAAACTTCACACGTGAGTAGCACATTCGACTGTGTTTGCTATTTTTTCGAGTTGTTGTT-----------TT
TGTTTATCTGCACCGAGGTTCCAAAAATCCATGTCCTCAGTTTGGGTCCTCACAATACTTTTTATAACTATTTATTTGAG
AAAC-AAAACT---------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------ATTTTTCGTCAAG
ACACCAAAACTAACTTGAAAGTGCGAATCTCGAGCTGCAGCATTAAAAAGGGCCAGTTCACATCTAAGCCCACGAGGCTA
ACCC-GGTCCCAAAACGA-AATCCCCAGCCCGACCCGCGCGCCCGCGCAACTGATTCGTCATTCGCGCCATCCCTCAAAA
A-GAAAAAGGAAAAA--CCAATTCGCGCCGCGCCGCCACGATTTCATCGCTAAATCGCCCC-CGAACGAACGA-AACAAC
AAATTTCCGCGCGAACCACAGGCGCTTTCGCGGCCGGATTCGAAATTTCAAGCCGAAAATCCCCGAGACGCCATCGCGTT
CCCT-TCCATTTCGGCAA--------TCTTCCTCCTACCGCCC------CCTCAAATTCGTTTCTCCAAATCCTCGCGCG
CTCGTCTCGATTCCAATCCCGGAATTTTTC-GCCTCCGCCGGGATCATTTAAGCCCGTCTTCCCTCCTCGGTCAAATCAC
CCCGCGCCCCGCGAGCCTGTTTCGTAGCCAAATCACCGATCCA--AATCTCGCCGCCCCGCACATGGAGATCGCCGGGGA
CGCCGCCGCGAGCGGTGGCCGCGGCATCCGCGACCTGCCGCCGCTGAAGCGGTTCAAGTTCGTCGGCTCCAACCTCGGGT
CAGCGCCGTGCCCGCCGCTGCCCGCCAAGAAGCGCGCGCTCCCGCCGCTGCCGGAGGCGGCGCCTGCCCCTGCCTGCCTT
CCGGCGAAGAAGCGCGCGTGTGCGCCACCGCTGGATGCCATCTCGCCGGCGTGTCTTCCGGCCAAGAAGCGCGTCCACGT
GCGCCCCCCTCCGCCGGAGGATAACGCTCCTCCTCCCTCCGTCCCGTACAAGAAGCCTCCCCTCGTTCCGGTGAAGAAGC
GCGTCGAGGTGCCGCCGCTCCCGCAGCGCGTCGTCAACGCCAATCCATTCGTTCCGGCCAAGAAGCGCGTCCAGGCGCCG
TCGCCCCCGGAGTACGCTGCTGCTCCGCCCCCCGTCCCGGTGAAGAACCATGCCCAGATGCCGCCGCGCCCGGGGAGCAT
CGTCGCCGCTACCCCAGGCGTCCCGGCGAAGAAGCGTGTCCAGGCTCCATCGCCCCTGGAGCACGCCGCCCCTCCCCCGA
CCGTTCCGGCCAAGAAGCGGGTCCAGGCGCCGTCGCCCCTGGGGATCGCCGCTGCTCCTCTCTCCGTCCCGGCCAAGCAG
CGCGTCCCTGTGCGGTCGTGCCCGGAGGGCGTCGCCACCGCCCCCTCCGTCCAGACCAACAAGCGCGTTCCGTGGCAATC
GCCCCCGGAGGACGCTTCTGCTCGGGCCCCGGTTTGCCTCCCGGCGAATAAGCGCGTGATGTCGCAGTTCATCCCGCCCT
CTCCATCTTCATCGATGAAGTCAGATGGGGCTCGCGTCGGCGCCCTCAAAGAAGCCTGTCCTCAAGGCTTCGTTGAAAGC
GGCGCCGCCACCTATCCTAAGGCGGCGAATGGTGCTGAAGCGTCCAAGATGACCAACAAGCCCGACGAAGTCAAGGATCA
GGTGTTCCAGAAATCCCGCAGAACAAACACCGCAAAAAGAGCGAGTGGCCTGCACTGCAAGAAGCTCTCCGATGTCATCA
ATGGCATGCAATCTGAAGTTCAGTCCGAAGAGCTCAAGAAATTCGAGCCAGCGAGTGATCTGCACTGCAAGAAGCTCTCT
GAAGTCGTCGGTAGCATGCAGTCTGAAGTTCATGCCGAAGAGCCCAAGAAGTTCGAGCAAACTAGTGATCTGCACTGCAA
GAAGCTCTCCGATGCCGTCAATGACACACAATCTGAAGTTCAGGCCAAAGCGCTCAAGACATTCGAGCAAACTAGTGATC
TGCACTGTAAGAAGCTCTCTGATGTCGTCGGTAGCATGCAATCTGAAGTTCAAGCCGAAGACCTCAAGAAATTCGAGCAA
ACTAGTGACCTGCACTGCAAGAAGCTCCCCGATGCCGTCAATGACGCACAGTCTGAAGTTCAAGCCGAAGTGCTGAAGAA
ATTCGAGCAAACGAGTGATCTGCATTGCAAG---CTCTCCAATGCCGTCAACGGCGAACAATCTGAAGCTCAAGCCGAAG
TGCTTGAGAAATTCGAGCAAACGGCTGATGTGCACTGCAAGAAGCTCCCCAATGTAGTCGATGACGAACAGTGTCAAGTT
CAAGCGGAGGCGCTCACGAAATTCGACCACGCGATTGTTCCTGAAGTGGCAGCGCCAGCACGCGAGGAGGAACACACGCA
GGAAGACGAAGAAGTGGCGGCCGAGCGAAGGCAAGATGCTCTCGCGGAAGAAGAGGACGACGGCATCCTCTGCGCGGTCT
GCCGAAGCACCGACGGCGACCAGTCGGACCCCATCGTGTTCTGCGACGGGTGCGACCTCATGGTGCACGCCACGTGCTAC
GGCAACCCGCTGGCCCAGTCCATCCCGGACGGCGACTGGTTCTGCTCGCTCTGCTCCGTCAAGCCC---GCCGCCGCCGC
GGGGAAGAAGGGCAAGCCGGCACGCCCGCCCTGCCGCCTCTGCCCGGCGAGGGGCGGCGCCATGAAACGCACCACGGACG
GCGCGTGGGCGCACATCGCGTGCGCGCTGCTGGTGCCGGAGGTGTTCTTCGGGGACCCGGACGGGCGCGAGGCCATCGAC
TGCTCCCTCGTGCCCGGCCGGCGGTTCACCAGGCACTGCTACATCTGCGAGAGCAGCAGGGGCTGCGCGCTCGAGTGCTC
CCAGCCCAAGTGCGACCTCGGGTTCCACGTCTCCTGCGGCCTCAACGGCGGCCTCTGCATCGAGTACCGCGAGGAGAAGG
GCGGCGGCGTCGTCGCCGGCTTCTGTAGGGAGCACACCAAGCTCTGGGAGAAGGTAAAATCCTGTGATTTTCTTGTCATT
GTCTTGTTTGAGCTTGCTTCAGCGATCTGATGTGAAACTTTTTGGTTGGATTTGTGTATGTGTTGGTGCAGCAACAACTG
ACTGGCAAGTACAAGATTGTTTCTAGAGGGCAGCAATGACATGGAGATGGAAGAGAAGAATCTGGCGATCAATTG--CTA
TGGAATGGTGAAGAATTGCATC----TCATAGTTGTCTAGGATTGTGTCATTGTTC----TAGTGTTTTTATTTTCTCCT
TTTGGTGTGCCTTCTGCGATCTTCAGATATGGTAGAAGATTAGAGGTGTCTCATGGCATG-----TAGTTACTTTGGAGT
TCTATTGGCACAGTTTTATGGTGTAGTCTGTAGAAAGCATGTAGTA---CTAGCTGTTAAGCTTCAGCTCATTTCTGATG
TCAAG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AAGTTGGGTTGTTCCTAC
CTCTT-AGAGACTTGGATTATTTTCAATAAGCAGAGTTTGAAGTCTA--GGCTGGATTAACAGTCTCTAGTTGTAATTTG
GTGTCAGTATATTGAAATAAGAGCATGTATTTTCCACAG----------TGTTGCGAGCAAGCATTAGGATTTGCCTCGG
AATTTATTCAGTAACCCAATTAGCAGATTATAATAGCGTGCAATCACCTCCGTGCGA---AGTAGTGCAGGCAATGAGCA
TCTTCGCTGCTTGATGTGACTAAAGAATTCAAAACCGCATCTTCAGATCGCTGACAATCACAAATTTTCACTCTCAGCAA
CTTGGTCCAAGATGATAACATTTCCCGGTGCAGAT--------AGAAACAAGTTCTGACGTTATCTTTCCAGGTAAAAAG
AAACAAAACAAGGGGACAATGCTGCTTTCAAAATGTTGAAATGAAGCCCTAAATCTGAATCGGCAAGTGCCTGAATAAGT
CAGTCGGTCAGGTGCTCCCACGGAACCGGATCCTCTAAGATGGAGAAGTAAAGTCTCGATGCTATAGTGCTAGTCTAGTG
TAAAATGAAAAAGAAAAGTTAAGAACTGTTAGTATATACTCCCTCCGTCCGGAAATACTTGTCATCAAAATGAATAAAAG
AGGATGTATCTAGATGTATTTTAGTTCTAGATACATCTCTTTTTGTTCATTTTGATGACAAGTATTTTCGGACAGAGGGA
GTATTAGTAGGCCTTTTG
>chr3D_1
GGTGATAACAAACATGAACAACTGTTCT-ACTCACATGCAAAGTTTCTCAAAGGAATGGCATTCGCCTTTTTT-CCATTT
TTTTCCGGATATATTCATCTTCAATCATGCCAATACAGCGAACACAAGAAAAATATATATAAATTACATCCAGATTCGTA
GATCACCTAGCGACAAGTATAAGCACCG----------AAGGCGCGCCGCCGTCGTCGCCCCTCCCTCGCCGGAGCCGGA
CACAACTTGTTGTAGTAGACAGTCGGAAAGTCGTCGTGAAAACAAT---TTTTTTGTCCAGAATTTGATGAATTTCAT-T
TTTTTCGCGAAACTTCACACGTGAGTAGCACATTCGACTATGTTTGCTATTTTTTTGAGTTGTTTATTTTTATTTTTATT
TGTTTATCTGCATCCAGGTTCCAAAAATCCATGTCCTCAGTTTGGGTCCTCACAATATTTTTTATAATTAGTCAATGTGT
ACGTGCAATGCACGTTAATTTGGAAGTATACTAAGTGCATGCGGATATTAAGTAGGATATTAATTGTGTGTTATTATGTG
ATTAGCATTATATTTGGCATGACGCACACTAAACGTGTTGAGCGCTCGACATAAAAGCAGTCTATATCGTTGGATTGACA
TGATTTGATGTCCGAGATTAATTGGATCTGCCTCTTTGGGTCTTTTTATATTGATTTATAGATATAGATATTTTCTTGAG
ACACCAAAACTAGCTTGAAAGTGTGAATCTGGAGCTGCAGCCTTAAAAAGAGCCAATTCACATCC-AGCCCACGAGACCA
AGCC-GCTCCCAAAACGATAACTCCCAGCCCGACCCGCGCGCCCGCGCAACTGG-------TTCGCGCCATCCCTCGAAA
AGGAAAAAGGAAAAA--CCAATTCGCGCCGCGCCGCCACAATTTCATCTCTAAATCGCCCC-CGAATGACGGCGAACCAA
GAATTTCCGCGCGAACCGCATGCGCTTTCGCGGCCGGATTCGAAATTTCAAACCCAAAA----------GCCATGGCGTT
CCCT-TCCATTTCCGCATTTCGGCTCTCTTCCTCCCACCGCCGCCTCCTCCTCAAATTCGTCTCTCCAATTCCTCGCGCG
CTCGCCTCGATTCCAATCCCGAAAGTTTTCCGCCTCCGCCGGGATCATTTAAGCCCTTCTTCCCTCCTCGGGCAAATCAC
CCCGCGCACCGCGAGCCTGTTTCATAGCCAGATCACCGATCCA--AATCTCGCCGCCCCGCCCATGGAGATCGCCAGGGA
CGCCGCCGCGAGCGGTGGCCGCAGCATCCGCGACCTGCCGCCTTCGAAGCGGTTCAAGTTCGTCGGCTCCAACCTCGGGC
CGATGCCGTGCCCGCCGCTGCCGGCGAAGAAGCGCGCGCTCCCGCCGCTGCCGGAGGCGGCGCCTGCCGCTGCCTGCCTT
CCGGCGAAGAAGCGCGCGTATGCGCTGCCGCTGGATGCCGTCTCGCCAGCGTGTCTTCCGGCCAAGAAGCGCGTCCACGT
GCGCCCCCCTCCGCCGGAGGATAGCGCTCCTCCTCCCTCCGTCCCGTCCAAGAAGCCTCCCCTCGCTCCGGTGAAGAAGC
ACGTCGGGGTGCCGCCGCTCCCGGAGCGCGTCGTCAACGCCACTCCATCCGTCCCGGCCAAGAAGCGCGTCCAGGCGCCG
TCGCCCCCGGAGTTCGCTGCTGCTCCTTCCCACGTCCCGGTGAAGAACCACGTACAGCTGCCGCCGCGCCCGGAGAGCGT
CCTCGCCGCCACTCCATCCGTCCCGGCGAAGAAGCGCGTCCAGGCTCCGTCGCCCCTGGAGCACGCCGCTCCTCCCCCCG
CCGTCCCGGCCAAGAAGCGCGTCCATGCGCCGTCGCCCCTGGGATACGCTGCCGCTCCCGTCGCCGTCCCAGCCAAGCCG
AGCGTCCTGGTGCCGTCGTGCCCGGAGGTCGTCGCCGTCGCCCCCTCCGTCCAGGCCAACAAGCGCCTTCCGTGGCAGTC
GCCACCGGAGGACGCTTCTGCTCGGGCCCCGGTTTGCCTCCCGGCGAATAAGCGCGTGATGTCGCAGTTCATCCCGCCCT
CTGCATCTCCACCATTGAAGTCAGATGGGGCTCTCGTCGGCGCCGTCAAAGAAGCCTGTCCTCAAGGCTTCGTTGAAAGC
GGCGCCGCCACCTATCCTAGGGTGGTGAATGGTGCTGAAGCGTCCAAGGACCAA--------------------------
-GTGTTCCAGAAATCCCGCAGAACAAACACTGCAAAAAGAGCGAGTGATCTGCACTGCAAGAAGCTCTCCGATGTCATCA
GTGGCATGCAATTTGAAGTTCAGGCCGAAGAGCTCAAGGAATTCGAGCCAGCGAGTGATCTGCACTGCAAGAAGCTCTCT
GAAGTCGTCGGCAGCATGCAATCTGAAGTTCACGCCGAAGAGCTCAAGAAATTCGAGCAAACTAGTGATCTGCACTGCAA
GAAGCTCTCCGATGTCGTCGATGGCACACAATCTGAAGTTCAGGCCGAAGTGCTCAACAAATTCGAGCAAGCGAGTGATC
TGCACTGCAAGAAGGTCTCTGATGTCGTCGGTAGCATGCAATCTGAAGTTCAGGCTGAAGAGCTCAAGAAATTCGAGCAA
CCTAGTGATCTGCCCTGCAAGAAGCTCTCCGATGCCGTCAATGGCACACAATCTGAAGTTCAAGCCGAAGCGCTCAAGAA
ATTCGAGAAAACGAGTGATCTGCATTGCAAGAAGCTCTCCAATGTCGTCAATGGCGAACAGTCTGAAGCTCAAGCCGGAG
TGCTCGAGAAATTCGAGCAAACGACTGATCTGCACGGCAAGAAGCTCCCCAATGTAGTCGTTGACGAACAGTGTCAAGTT
CAAGCCGAAGCGCTCAAGAAACCCGACCACGCGATTGATCCTAAAGTGGCAGCACCGGCACGCGAGGAGGAGCACACGAA
GGAAGACGAAGAAGTGGCGGCCGAGCGAAGGCAAGACGCTCTCGCGGAAGAAGATGACGACGGCATCCTGTGCGCGGTGT
GCCGGAGCACCGACGGCGACCCGTCGGACCCCATCGTGTTCTGCGACGGGTGCGACCTCATGGTGCACGCCACCTGCTAC
GGCAACCCGCTGGCCCAGTCCATCCCGGACGGCGACTGGTTCTGCTCGCTCTGCTCCGGCAAGCCCCCCGCCGCCGCCGT
GGGGAAGAAGGGCAAGCCGGCGCGCCCGCCCTGCCGCCTCTGCCCGGCGAGGGGCGGCGCCATGAAGCGCACCACGGACG
GCGCCTGGGCGCACATCGCGTGCGCGCTGCTGGTGCCGGAGGTGTTCTTCCGGGACCCGGACGGGCGCGAGGGCATCGAC
TGCTCCCTCGTGCCCGGCCGGCGGTTCACCAGGCGCTGCTACGTCTGCGAGAGCAGCAGGGGCTGCGCGCTCGAGTGCTC
CCAGCCCAAGTGCGACCTCGGGTTCCACGTCTCCTGCGGCCTCAACGGCGGCCTCTGCATCGAGTACCGCGAGGAGAAGG
GCGGCGGCGTCGTCGCCGGCTTCTGCAGGGAGCACACCAAGCTCTGGGAGAAGGTAAGATTTTGTAATTTTCTTGTCATT
GTCTTGTTTGAACTTGCTTCAGGGATCTGATGTGAATTTTTTTGGTTGGATTTGTGTATGTGTTGGTGCAGCAACAACTG
ACTGGCAAGTACAAGATTGTTTCTCGAGGGCAGCAGTGACATGGAGATTGACGAGAAGAATCTGCCGATCAATTG--CTA
TGGATTGGTGAAGAATTGCATCGATCTCATAATTGTCTAGGATTGTGTCATTGTTCGTTCTAGTGTTTTCGTTTTCTCCT
TTTGGTGTGCCTTCTGCAATCTTCAGATATGGTAGAAGATTAGTAGTGTGTCATGGCATGTACTGTAGTTACTTTGGAGT
TTTATTGCCATAGTTTTATGGTGTAGTATGTAGAAAGCATGTAGTA---GTAGCTGTTAAGCTTCAGCTCACTTCTGATG
TCAAG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AAGTTGGGTTGCTCCTAC
CTCTTTAGAGACTTGGATTATTTTCAATAAGCAGAGTTTGAAGTCTATAGGTTGGATTAACAGTCTCTAGTTGTAATTTG
GTGTCAGTATATTGAAATAAGAGCATGTATTTTCCAG--TGTTGGCCGTTGTTGCGAGCAAGCATTAGTATTTGCCTCGG
AATTTATTCAGTAACCCAATTAGCGGATTACAATAGCGTGCAATCACCTCCGTGCGA---AGTAGTGCAGACAATGAGCA
TCTGTGCTGCTTGATCTGACTAAAGAATTCAAAACCGCATCTTCAGATCGCTGACAATCACAAAATTTCACTCTCATCAA
CTTGGTCCAAGATGATTATGTTTCCCGGCGCAGATAATTGTAAAGAAACAAGTTCTGACATTATCTTTCCAGGTAAAAAG
AAACAAAACAAGGGGATAATGCCGCTTTCAAAATGTTGAAATGAAGCCCTAAATCTGAATCGGCAAGTGCCTGAATAAGC
CAGTCGGTCAGGTGCTCCCACATGAACC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr3A_1
GGTGATAACAAGCATGAACAACTGTTCT-ACTCACATGTAAAGTTTCTCAAAGGAATGACATTCGCCTTTTTTTCCAATT
TTTTTTGGATATACTCATCTTCA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATTTTTCTT
GGTTTATCTGCACCCAGGTTCCAAAAATCCATGTCCTCAATTTGGGTCCTCACAATACTTTCTATGACTATTTTTTTGAG
AAACAAAAACT---------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------ATTTTTTGTCGAG
ACACCAAAACTAGCTTGAAAGTGTGAATCTGGAGCTGCAGCCTTAAAAAGG-CCCATTCATATCT-AGCCCACGAGACCA
AGCTGGCTCCCAAAACGA-AACTCCCAGCCCGACCCGCGCGCTCA--------G-------TTCGCGCCATCCCTCAAAA
G-GAAAAAGGAAAAAAACCAGTTCGCGCCGCGCCGGCACAATTTCATCGCTAAATCGCCCCCCGAATGGACGA-AACCAC
AAATTTCCGCGCGAACCGCATGCGCTTCCGCGGCCGGATTCGAAATTTCAAGCCTAAAATCCCCGAGACGCCATCGCGTT
CCCTCTCCATCCCGGCAA--------TCTTCCTCCCACCGCCC---CCTCCTCAAATTCGTTTCCCCAAATCCC--CGCG
CTTGTCTCGATTCCAATCCCGGAAATTTTC-TCCTCCGCCGGGATCATTTAAGCGCTTCTTCCCTCCTCGGTCAAATCAC
TCCGCGCCACCCCGCGAAATCACGAAGCCAATCTCAGACCAGTCCAATCTCGCCGCCCCGTCCATGGAGATCGCCGGGGA
CGCCGTGGCGAGCGGTGGCCGCAGCATCCGCGACCTGCCGCCGCTGAAGCGGTTCAAGTTCGTCGGCTCCAACCCCGGGT
CGGCGCCGTGCCTGCCGCTGCCGGCCAAGAAGCGCGGGCTCCCGCCGCTGCCGGAGGTGGCGCCTGCCCCTGCCTGCCTT
CCGGCGAAGAAGCGCGCGTATGCGCCACCGCTGGATGCCGTCTCGCCGGCGTGTCTTCCGGCCAAGAAGCGGGTCCACGT
GCGCCCCCCGCCGCCGGAGGGTAACGCTCCTCCTCCCTCCGTCTCGTCCAAGAAGCCTCCCCTCGTTCCGGTGAAGAAGC
TCGTCGAGGTGCCGCCGCTCCATGAGCGCGTCGTCAACGCCATTCCATCCGTTCCGGCCAAGAAGCGCGTCCAGGCGCCG
TCGCCCCCGGAGTACGCTGCTGCTCCTCCCCCCGTCTCGGTGAAGAACCAAGTCCAGATGCCGCCGCGCCCGGGAAGCGT
CGTCGCCGCCACCCCAGCCGTCCCGGCGAAGAAGCGCGTCCAGGCCCCGTCGCCCCTGGAGCACGCCGCTCCTGCCCCCG
CCGTCCCGGTCAAGAAGCGCGTCCATGCGCCGTCGCCCCTGGGATACGCTGCTGCTCCCGTCGCCGTCCCGGCCAAGCAG
CGCGTCCTGGTGCCGTCGTGCCCGGAGGGCGTCGCCGCCGCCCCCTCCGTCCAGGCCAACAAGCGTGTTCCGTGGCAGTC
GCCCCCGGAGGACGCTTCTGCTCTGGCCCCGGTTTGCCTCCCGGCCAATAAGCGCGTGATGTCGCAGTTCATCCCGCCCT
CTTCATCTCCATCGATGAAGTCAGATGGGGCTCGCGTCGGTGCCGTCAAAGAAGTCTGTCCTCAAGGCTTCGTTGAAAGC
GGCGCCGCCACCTATCCTAAGGTGGCGAATGGTGCTGAAGCGTCCAAGATGATCAACAAGCCCGACGAAGTCAAGGATCA
GGTGTTCCAGAAATCCCGCAGAACCAACACTGCAAAGAGAGCTAGTGATCTGCACTGCAAGAAGCTCTCCGATGTCATCA
GTGGCATGCAATCTGAAGTTCAGGCCGAAGAGCTCAAGAAATTTGAGCAAGCGAGTGATCTGCACTGCAAGAAGCTCTCT
GAAGTCGTCGCTAGCATGCAATCTGAAGTTCATGCCGCAGAGCCCAAGAAATTCGAGCAAACTAGTGATCTGCACTGCAA
GAAGCTCCCCGATGCCGTCACTGGCACACAATCTGAAGTTCAGGCCGAAGACCTCAAGAAATTCGAGCAAAC--------
-------------GCTTTCTGATGTCGTCGGTAGCATGCAATCTGAAGTTCAAGCCGAAGACCTCAAGAAATTCGAGCAA
ACTAGTGATCTGCGTTGCAAGAAGCCATCCGATGCCGTCAATGACACACAGTCTGAAGTTCAAGCCGAAGCGCTCAAGAA
ATTCGAGCAAACGAGTGATCTGCACTGCAAGAAGCTGTCCAATGTCGAAAACGGCGAACAGTCTGAAGCTCAAGCCGAAG
TGCTCGAGAAGTTCGAGCAGACGACTTATCTGCACTGCAAGAAGCCCCCCAATGTAGTCGATGACGAACAATGTCAAGTT
CAAGCCGAAGCGCTCAAGAAATTCGACCGCGCGATTGATCCTGAAATGGCAGCGCCGGCAAGCGAAAAGGAGCACATGAA
GGAGGACGAAGAAGTGGCCACCGAGCGAAAGCAAGATGCTCTCGCGGAAGAAGAGGAGGACGGCATCCTCTGCGCGGTGT
GCCGGAGCACCGACGGCGACCCGTCGGACCCCATCGTGTTCTGCGACGGGTGCGACCTCATGGTGCACGCCACGTGCTAC
GGCAACCCGCTGGCCCAGTCCATCCCGGACGGCGACTGGTTCTGCTCGCTCTGCTCCG------------CCGGCGCCGC
GGGGAAGAAGGGCAAGCCGGCACGCCCGCCCTGCCGCCTCTGCCCGGCGAGGGGCGGCGCCATGAAGCGCACCACGGACG
GCGCCTGGGCGCACATCGCGTGCGCGCTGCTGGTGCCGGAGGTGTTCTTCCGGGACCCGGACGGGCGCGAGGCCATCGAC
TGCTCCCTCGTGCCCGGCCGGCGGTTCACCAGGCGCTGCTACATCTGCGAGAGCAGCAGGGGCTGCGCGCTCGAGTGCTC
CCAGCCCAGGTGCGACCTCGGGTTCCACGTCTCCTGCGGCCTCAGCGGCGGCCTCTGCATCGAGTACCGCGAGGAGAAGG
GCGGCGGCGTCGTCGCCGGCTTCTGCAGGGAGCACACCAAGCTCTGGGAGAAGGTAAAGTCCTGTAATTTTCTTGTCAGT
GTCTTGTTTGAACTTGCTTCAGCGATCTGATGTGAAATTTTTTGGTTGGATTTGTGTGTGTGTTGGTGCAGCAACAACTG
ACTGGCAAGTACAAGATTGTTTCTAGAGGGCAGCAATGACATGGAGATGGAAGAGAAGAATCTGGCGATCAATTGTGCTA
TGGAGTGGTGAAGAATTGCATC----TTATAACTGTCTAGGATTGTGTCATTGTTC----TACAGTAGTAT--------T
TTTGGTGTGCCTTCTACAATCTTCAGATATGGTAGAAGATTAGAAGTGTGTCATGGCATGTACTGTAGTTACTTTGGAGT
TTCATTGCCATAGTTTTATGGTGTAGTCTGTAGAAAGCATGTAGTAGCACTAGCAGTTAAGCTTCAGCTCACTTCTGTTG
TTAGTACTACCTCTCTCTCAGTTTACAGGGCGTGCGCGTACTCCTAGGTCGTCAATTTGACCAACCTAATACAAGTCATA
TATTACAAAAAATATACCAACATAAACTTCAGAGTTTCTACTTTCAAAAGGTATCATTTTTATGTTCTATAGTTTATATT
AGAGTGATAAAATTGACAACCTAGATATACGTGTAGGACTTGTAAACTGAAACGGAGGTAGTAAGTTGGGTTGTTCCTAC
CTCTT----------GATTATTTTCAATAAGCAGAGTTTGAAGTCTATAGGTTGGATTAACACTGTCTAGTTGTAATTTG
GTGTCAG--TATTGAAATAAGAGCATGCATTTTCCAAACTGCTGGCCGTTGTTGCGAGCAAGTATTAGTATTTGATTCAG
AATTTATTCAGTAACCCAATTAGCAGATCATAATAGCGTGCAACCACGTCCGTGCGAAGTAGTAGTGCAGACAATGAGCA
TCTTCGCTGCTTGATCTGACTAAAGAATTCAAAACCGCATCTTCAGATCGCTGACAATTGCAAAATTTCACTCTCATCAA
CTTTGTCCAAGATGATAATATTTCCCCGTGCACATAATTGTAGAGA----------------------------------
--------------------------------------------------------GAATCGGCAAGTGTCTGAATAAGT
CAGTCGGTCAGGTGCTCCCACATGAACC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>SNPs
---------------------S-----SS--------------------------------------------S--S--S
--S----S-----------------------S---------------------SS---SS--------------------
--S-----S----------S-S----S-SSSSSSSSSS----------------S--------SSS--S-----------
-----------------S-------------S--S---------S-SSS-----S---S-------------S-----S-
---------------------------------------S---------------S--------SS--------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S---S--
------------S----------S------S----------S-------------S---------S----------S-S-
-S----S--------------SS------------------------------SSSSSSSS-------------------
---------------------------------------S--------------------------S----------S--
-----------------S--S---------------------------------S-------------------------
-----------------------------------S--------------------------------------------
------------------------S-------------------------------S-----------------------
-------------------------------------------------------------S------------------
----------------------S---------------------------------------------------------
-S--------------------S---------------------------------------------------------
-------------------S-------------------S----------------------------------------
-----------------------------------------------S--------------------------------
S----------------------S------------------S-----S-------------------------------
--------------------------S-----------------------S-S-------------------------S-
---------S-------S------------------S-----------S--------------------S--------SS
----S--------------S-----S-----------------SSS---S--------SS--S-----------------
-------SS----S----------------------S-----------------S----------------------S--
--------------------------------------------------------------------------------
--S-----S-----------------------------------S-----------------------------------
----------------------S-----------------------------S---------------------------
------------------------------S----------------SS-------------------------------
S----------------------S--------------------------------------------------------
--------------------S-----------------------------S-----------------------------
-----------------------S----------------------S---S--------S------------S-------
-------S------------------------------------------------------------------------
--------S----S-------------S-----------------S------------------------S---S-----
--------------------------------------------S---------------S-------------------
----S------------------S-----S--------------------------------------------------
-----S--S-------S--------------------S------------------S--------------S------S-
------------------------------------------------------------------------------S-
----S----------------S----------------------------------------------------------
----------------------------------------------------------S---------------------
------------------------------------------------------------------S-------------
----S---------------------------------------------S-----------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
-------------------------S---------------------------------------S--------------
-----------S-------------------------S------------------------------------------
--------------------------------------------------------------------------------
----S--------------------------S-------------------------------------SS---------
-----------------S--------------------------S----S------------------------------
-S-----S--S------------------------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
------------------------------------S-S-----------------------------S-----------
----------------------------------------------------------------------S---------
---------------S------------------------------------------------S-----------S---
------------------S----------------------------------------S--------------------
----------------S-----S---------------------------------------------------------
---------------------SSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS
>forward_229
--------------------------------------------------------------------------------
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-------------------------------------------------CCGTCATCGCCCCTTATTCA-----------
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>reverse_2289
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------------------------------------------------CCTGCACTGCAAGAAGCTCT------------
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>forward_822
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--ACCCGGTCCCAAAACGAAAT----------------------------------------------------------
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>reverse_2824
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-----------------------GCTGATGTGCACTGCAAGAA-------------------------------------
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>forward_2504
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----CTCTCCGATGCCGTCAATGA--------------------------------------------------------
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>reverse_4357
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------------------------------------CAGTGTTGCGAGCAAGCATT------------------------
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------------------
