>input_sequence_32635
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----------------------------------------------------------CCGATCTCCCTAATTTCTGGGC
GCATCTAGATCCGTCCCTGTTGCTAAATCGCGGTTGCCTG-CTGTTTTGCCCGTCGATGCAGGGGAACATGGCGAGGCTG
GTGTCGTCTTCCCTCGTCAGGGGGCTCGTGCGGTCGTGCCGCGCGCCCAGCACGGCGGTAAGTGCCGGCACCTTCATCAG
-TTCATAGTTCTGAGATTTTCCCCATTTATTTTCGCTCAACTGCTCCGAGCTCTGATCGAGCCCTAAAATCCCCAAATTG
CTGTCAGGTTCATTGGGACCTAGTAAGCTAACCGGTTCACTCGTTTACAGTTACATAAATTTAATGTTACATTCATCTGT
GCC--------AAGTGATTCTATCACGAGATTGTTTGATAAGAGCTATCATGATGACCCTGGTTTTCACCTTTTTTAAAA
GCATATCATGTCTAGAGATGAGACTCTGGTGGCCCCATATATTTTAACCAAAAATCCACATGTGTAGAGTCAGCATCTGT
C--------------ACCATTTGTGCTATAAGGCAGCCATTATTATGTCTAAATG---------GATGCTATAGTTCTCT
ACCAAGTGGTTTCCTGTAAACGTGTTCCATTTAAATGGGATGTTTATGCAACCTGTTTAATGCTGTACGCCTGCATGGAG
AGTGGTTCGGTGAGGCTGGAGCCACATCCTGGCTCTGAACCTTATAATGCCATAGACTGGTGGTTGTTTTGGTTTCATTT
TAGATGGAACAGTGGCTATGAGCTTTGAAGAAGGTTACATGGTTAGTTTTAGCTTAGACTTGCAATGTTATCACAGTTGA
GGTTTTCTCGTTAGCTTCTGGGCATCTATTGTCCATTTGTCCTTTTCGCTCTGTGCTTACACTAT-GTATTTTCAAGCTT
TATTTTGCTTCCAATTTATCAAAGAACCAACTAATGTTGCACTATGAGCTTTTGTCAAGCAAAG-CAGATTGTTTCTGTT
GCGATTTTGATCTCATGTTCACACAATGACCTTGTTTTTACATGATAATTGGAAAAGCAGACCGTGTCACGACCAGCTTT
CCAACAGTTCATGACCTACTCATCAGGAATCAGTGGTGATTCTAACGTGAATGGGGGCACAAGTGCAACACGAGTAACCG
CTGATACTGATACACATCAAGATTTCCAGCCTACAAGCAAAGGTTCTGACATGTCTTTGCAAGACATCGTTGCTCAGGTA
TTTATATGCACACATGAGCTTCAGAACATTTAGATTCAAGCACTTGAAATATAACAAAAATACGCATGGCATGAAAATTG
TAAAGCTTAATGTTGTGTCATATTCTTCTGCTGTTAATTAATTTCCTTGATGAAATCTTTGGCAGGATATCAAGGAGAAT
CCAGTCATTATCTTCATGAAGGGTTATCCTGAAGCTCCCAGGTGTGGATTTAGTGCACTGGCTGTTAAGGTCCTCCAGCA
ATATGGTAAGCTATATCTCAGAACCAGCTGTCAGTAAATTGTGCCTCTGAAATCCCTAAATCATATCTTGTCTGTTGCAG
GCGTCTCTATCACTGCCAGAGATATTCTGACTAATATGAAGCTCAAGGAGAGTGTCAAAGCTTACTCGTAAGTGGCTCGT
CATAACCTCCCTGATGATGTACTTTCAGTTTTAGATGGAGGACAATTGTTTCAAAAAGGAGAAGG-AAAAAGGAACTAGC
CATG--------------------------GGAATAGGGTATGAGATGATGTGGTAAAGAAAATATTTTACTATGGGTTA
AGATTTAGCTTCAACAACAGATGAT-AAACATACAGAATATGATTTTGATTTA-GTTAGTTGGAGGCTTTACTTGGAACA
GA-TTCGTCGAAAACATGTTGTGTGCCCTTGATTACAACATTGCAGAGTTCTACTTAATGTTCAACTTTCAGAGTTCCAA
TTTTATTCAGTTTCATTCATATGTATCATGGCGGAAATGACAAATGGATAATTTAACACCTGTTGCTAAGCTGCCGGGAT
TTACAAATTATGTATCTCCTGATGGTATCATTATTAAAGCTACTGTTTGTTTGTGCAGTAACTGGCCTACCTTTCCGCAA
ATATTTATCAACGGGGAGTTCGTTGGGGGCTCTGACATCATATTAAGCATGCACCAGGCAAGTGAACC------------
--------------------GATCATCACTATTTCGTTCAGCATGTGTATCCAGCTGGTATCTTTCACTTGGTGGTTGAC
TTGTTCTCCA--AATTTTCTTCAGAAAGGGGAACTTAAGGGTTTACTTGGTGATTCCGCACAAAAGGGCGAGCAAGACAG
TGCCCAGTGAAACAAGCTACAGTATGTTAGCTTTTGCATCGAGATGGATGCTTCCTCTCTGAGTACACTTTAACTCGAAG
CTCTTCATGTGGTGTTCTGTCGTTTTGGCGCGGGATTTTCATCATTGTGTTGCCAGCCATGATGGAAATCTCTCGGTTCC
AAGAGCATCCAAGTTTCCGTTTCATGACAAATAAATGCCACTTTTCAAT-------------------------------
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>chr3B_1_TraesCS3B01G147100
TTTGTAAAATTCATATGTTAACTAATCTTCTGTTTTACATATGTCTTCCTACTAATTTCTGCATTTTTGAAATCCTATGA
ACCAAAGGAAGCTATTGGTGTTACTGTAAATATAAAGCATATACTACTAAAATGTACTCCCTCCATCCCAAAATGTAAGA
TCATTTTTGACGCTATCAAAATGATCTTACATTTTAAGACGGAGGGACTATCTTTTAGACTGGTTATCTTATTTTCTGAA
ATTTTATATGTTTTTTATGGGTAGATTAATTCAATTACCC-TTTTTACATCTTCCAATAACGATGGAGCGACATGCAACG
GTTGATTCGAAAGAAAGAAGAAGGAATCTCTATGCAATATCTTTACTTTCTTTTTTAGGGGTGTACGGTCTGTATGAC--
--GAAGTCGTCACAAATGTCTTTGTAGTCGACGGGAACATCTCTTTGCACTGAATGCACATCACCGAAAGTTTTCAAATA
AA--TTCAGAAAATGCGACCATCGGTGTCAAGTCTAGGACTTGATCCTGTTGGGTTGGTTCCGCCACAAAACTCTAACCA
TATGAGCTACCAAATCAGTTTGCA--------TTGAAAACAAATAATGGATCGCATATCGGTCGGTTGTACTCCG-----
TTTGCTTCAGTGCGAGCTTGGCCGCGTCGTGGATCA--------------------------------------------
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------------------------------------------------CCAAGTCATCGCCCTGATCCCGCGCAAAAAA-
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------------------------------AAAAAAAAAATCATCATCCTGATGAAGAGCGCGCGCGTGGC--------G
ATCGAACGGTGCGGAGCACGT---------------TGCACCGCACGTTCGTGCGGTATATTCACCGAACAGCACATCCT
AG------TAGATTGGAGTCGAACCGTCCGAGAAGGCAGTGCA------CGCCGCCGCCGCCCCCTCCTCAATCCCCCGG
CCCCGCCGCCCAACTCCCTCCGCCTCTCACGCGCGTCGCCGCCCACCGCGCCCCTGCTGTCTCCACCCCGTCCGCAATCT
CTCGCCACTGGGTTTCGAGGTATGAGCTTTCGTTCATCCACGGATTAGTTAAACCCTACCGATCTCCCTAATTTCTGGGC
GCATCTAGATCCGTCCCTGTTGCTAAATCGCGGTTGCCTG-CTGTTTTGCCCGTCGATGCAGGGGAACATGGCGAGGCTG
GTGTCGTCTTCCCTCGTCAGGGGGCTCGTGCGGTCGTGCCGCGCGCCCAGCACGGCGGTAAGTGCCGGCACCTTCATCAG
-TTCATAGTTCTGAGATTTTCCCCATTTATTTTCGCTCAACTGCTCCGAGCTCTGATCGAGCCCTAAAATCCCCAAATTG
CTGTCAGGTTCATTGGGACCTAGTAAGCTAACCGGTTCACTCGTTTACAGTTACATAAATTTAATGTTACATTCATCTGT
GCC--------AAGTGATTCTATCACGAGATTGTTTGATAAGAGCTATCATGATGACCCTGGTTTTCACCTTTTTTAAAA
GCATATCATGTCTAGAGATGAGACTCTGGTGGCCCCATATATTTTAACCAAAAATCCACATGTGTAGAGTCAGCATCTGT
C--------------ACCATTTGTGCTATAAGGCAGCCATTATTATGTCTAAATG---------GATGCTATAGTTCTCT
ACCAAGTGGTTTCCTGTAAACGTGTTCCATTTAAATGGGATGTTTATGCAACCTGTTTAATGCTGTACGCCTGCATGGAG
AGTGGTTCGGTGAGGCTGGAGCCACATCCTGGCTCTGAACCTTATAATGCCATAGACTGGTGGTTGTTTTGGTTTCATTT
TAGATGGAACAGTGGCTATGAGCTTTGAAGAAGGTTACATGGTTAGTTTTAGCTTAGACTTGCAATGTTATCACAGTTGA
GGTTTTCTCGTTAGCTTCTGGGCATCTATTGTCCATTTGTCCTTTTCGCTCTGTGCTTACACTAT-GTATTTTCAAGCTT
TATTTTGCTTCCAATTTATCAAAGAACCAACTAATGTTGCACTATGAGCTTTTGTCAAGCAAAG-CAGATTGTTTCTGTT
GCGATTTTGATCTCATGTTCACACAATGACCTTGTTTTTACATGATAATTGGAAAAGCAGACCGTGTCACGACCAGCTTT
CCAACAGTTCATGACCTACTCATCAGGAATCAGTGGTGATTCTAACGTGAATGGGGGCACAAGTGCAACACGAGTAACCG
CTGATACTGATACACATCAAGATTTCCAGCCTACAAGCAAAGGTTCTGACATGTCTTTGCAAGACATCGTTGCTCAGGTA
TTTATATGCACACATGAGCTTCAGAACATTTAGATTCAAGCACTTGAAATATAACAAAAATACGCATGGCATGAAAATTG
TAAAGCTTAATGTTGTGTCATATTCTTCTGCTGTTAATTAATTTCCTTGATGAAATCTTTGGCAGGATATCAAGGAGAAT
CCAGTCATTATCTTCATGAAGGGTTATCCTGAAGCTCCCAGGTGTGGATTTAGTGCACTGGCTGTTAAGGTCCTCCAGCA
ATATGGTAAGCTATATCTCAGAACCAGCTGTCAGTAAATTGTGCCTCTGAAATCCCTAAATCATATCTTGTCTGTTGCAG
GCGTCTCTATCACTGCCAGAGATATTCTGACTAATATGAAGCTCAAGGAGAGTGTCAAAGCTTACTCGTAAGTGGCTCGT
CATAACCTCCCTGATGATGTACTTTCAGTTTTAGATGGAGGACAATTGTTTCAAAAAGGAGAAGG-AAAAAGGAACTAGC
CATG--------------------------GGAATAGGGTATGAGATGATGTGGTAAAGAAAATATTTTACTATGGGTTA
AGATTTAGCTTCAACAACAGATGAT-AAACATACAGAATATGATTTTGATTTA-GTTAGTTGGAGGCTTTACTTGGAACA
GA-TTCGTCGAAAACATGTTGTGTGCCCTTGATTACAACATTGCAGAGTTCTACTTAATGTTCAACTTTCAGAGTTCCAA
TTTTATTCAGTTTCATTCATATGTATCATGGCGGAAATGACAAATGGATAATTTAACACCTGTTGCTAAGCTGCCGGGAT
TTACAAATTATGTATCTCCTGATGGTATCATTATTAAAGCTACTGTTTGTTTGTGCAGTAACTGGCCTACCTTTCCGCAA
ATATTTATCAACGGGGAGTTCGTTGGGGGCTCTGACATCATATTAAGCATGCACCAGGCAAGTGAACC------------
--------------------GATCATCACTATTTCGTTCAGCATGTGTATCCAGCTGGTATCTTTCACTTGGTGGTTGAC
TTGTTCTCCA--AATTTTCTTCAGAAAGGGGAACTTAAGGGTTTACTTGGTGATTCCGCACAAAAGGGCGAGCAAGACAG
TGCCCAGTGAAACAAGCTACAGTATGTTAGCTTTTGCATCGAGATGGATGCTTCCTCTCTGAGTACACTTTAACTCGAAG
CTCTTCATGTGGTGTTCTGTCGTTTTGGCGCGGGATTTTCATCATTGTGTTGCCAGCCATGATGGAAATCTCTCGGTTCC
AAGAGCATCCAAGTTTCCGTTTCATGACAAATAAATGCCACTTTTCAATA---CTGTTTTTTGTACGTTGTAATAGTCAG
GTGATTTTGTTTGGATTCTATATACTTTGGGCTCCGTTTGCGTTGCAGTAATAAATGGTTAGGCTGTTACA---------
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-------------------------------------TAGTTATTTATGCTGCTTTTCTATTCTGCGAAGTTAATTTTGT
TTGTGTAATCATCCGTTTCCACTGCGAGCGCACCATCGATTCAAGGCTTGTGGGGTTGCATTATCTGAATTCAGAACTTA
CCTGTGTAATGCATCTTGCTCGTATAAACTTACAGCAT-AAACCTGCCCAAATCGAAGAAGGTAGTGGCGATTCC---GT
CGAGGGCAGATTTTGGGTTATTTGAAATAATCAAAACAGATGAGTAATACTCCCCCGGTCTCATAATGTAAGACGTTTTT
AACACTAGCGTAGTATCAAAAAATGTCATACATTATGGGACAGAGGGAGTAACTTCTAAAAATTCTGAAAACAATTTTAT
TTTTGTGAAAATG--CCCCAGATCTATTATAAAGGATCAACAACAATAGAGATAAGTCCATATTACAACCTCGAACTATC
ACTGAAGTCTAAAAAACAACTGTGAACTACGC-------AACGGTCTAATAGACAACCCTCAACTTTCAAAACCA-----
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--------------AAACAGCTTGTAAATGTAATTAATTTGTTCAGCAAATGTCATCCACAAAAATATTTAGAC-AAAAA
GTTGAAACTTGAAATGTGAAAACTGAACCAGGAT--TCCTTTTTCTATGGCACAAACACAAACAACTCCTTATGCCCTCT
TTGTGGCTGATGCTGAAGCTCGAAGGACA---TAGTAGTGTTTCTTGTTGCACTGTAACTTTGA--CTCTGCTATGTAAC
CCTCCTGGATTCGCTATCAACAATGTAATAGTAGTGTTTCTTGTTGCACTGTAACTTTGACTCTGCTATGTAACCATCCT
GGATTTGCTATCAACAATGTAACTTGTCTATCTTATGAATGATTGTAACAATGTAACAAT--------------------
----------------------ATAAATATATATGTCTCATTAAGCACGTGTGAGATCTC
>chr3D_1
TTTGTAAAATTCATACGTTAACTAATCTTCTGTTTTACATATGTCTTCCTACTAATTTCTGCATTTTTGAAATCCTATGA
ACCAAAGGAAGCTATTGGTGTTGCTGTAAATATAAAGCATATACTACTAAAATGTACTCC----ATCGCAAAATGTAAGA
TCATTTTTTACGCTATCAAAATGATCTTACATTTTGAGACGGGGGGAGTATCTTTTAGACTGGTTATCTTATTTTCTGAA
ATTTTATACGTTTTTTGTGGGTAGATTAATCCAATTACCCCTTTTTACATCTTCCAATAATGATGTAGCGGCATACAACG
GTCTATTCGAAAGAAATAAGAAGGAATTTCTATGCAATTTCTTTATTTTCCTTTTTAGGGGTGTACGGTCTATATGAC--
--GAAGTCGTCACAGACGTCTTTGTAGACGATGGGAACATCTCTTTTCACTAAATGCACATCATCGGAAGTCTTCAAATA
AA--CTCAGAAAATGCAGCCATCAGTGTCAAGTCTAGGACTTGATCCTGTTGAGTTGGTTCCACCATAAAATTTTAACCA
TCTGAGCTACCATT--AGTTTGCATTTG---------AACAAATAATGGATCGTATATCGGTC-----------------
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>chr3A_76
---------------------------------------------------------------------------TATGA
ACCAAAGGAAATTATTGGTGTTACTGTAAATAGAAAGCATATACTACTAAAATGTACTCCCTCTATCTCAAAATGTAAGA
TCATTTTTGACATTGTCATAATGATCTTACATTTTGAGACGGGGGAAGTATCTTTTAGATTGGTTATCTTATTTTCTAAA
ATTTTATACGTTGTTGATGGGTAGGTTAATCCAATCACCCTTTTTTACATCTACCAGTAGTGATGGAGCGGCATGGC---
--TGATTTGAAATAAAGAAGAAGATATTTCTATGCAATTTCGTTTCTTTTCTTTTTAAGGTTGCACGGCCTGTATAACTG
ACGAAGTCGTCATAGACGTCTTCGTAATCAATGGGAATATCTTCTCTCACTGAATGCACACCGTTGGAAGTCTTCAAATA
AAAACTCAAAAAATGCGACCACTAGCGTCATGTTTAGAACTTGACCTTGTTGGGTTGGGTTT--CACAAGAATCTAACCA
TCTGAGCTACCCTC--GATTCGCATTTTGTTTTTGAAAACAAATAATGGATCATATATCGGTCGGTTGTACTCCGTTTAA
TTTGCTTCAGTGCGAGCTTGGCCGGGCCATGGATCA--------------------------------------------
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------------------------------------------------CCAAGTCATCATCCTGATGCGAGCTTGGCCGG
GCCGTGGATCACCATGGAGGATAGAATGCAGATTTTGTACTTCTGGTGGGAGTAGTGGAATGACAGAAACCGGGTCAAGA
AGAACGAAGGCAGAAGTCGGCCAGAGGAGATAGTGCACGGGACTAAGCTAGCCACCATGAAATACTGAGAAATTGTGGGG
AAGCAAGAGCGACATATTCCAAAGGAGAAGACAAAATGGCAGGCGCGTGAAGCGGACGTACTGAAGTTTAACATTGATGG
TGCCCACATGCCAGGAAGCTCTCAATCTGCGTGGGAGTGATTGCACGTGACCTCAATGAAGATGCAGTAGCTTGCATGGC
AGGAAGGAATGAGCATGTCCATGATGCTTTCGCAGCAGAACTACGAGCGGCTGAGGGCGAGATGGAGCTGGCCGCCCATC
TTGGAGCGATCCGGATCTGCATCGAGACTGACTCACAGCTTCTCCAGCGGCCCTCACGCGGAAGGAGCCAAACTTCTCAG
CAAATGCCTCGGCCCTGGACGTCCTGAAGATTCAAATGAGGCTATGATTCTCAAAGTGTGATGTTATTGCATGCAGGCGG
GAAGCCAACGGTGCTGTGCACGAACTCGCTAAGTTAGGATACGAATGTAATGTGAATGAACCCACCATATGGGATATCAG
TGTTCCGCCGTCTGTGGCCGAACTTGTTTTAGGCGACATGCCTAGCCTGGTTGCGTAATAAAGCGTTTTTGCTTTGACCC
TAAAAAAAGTCATCAACCTGATGTCCCGTTAAAAAAAAAATCACCATCCTGATGAAGAGCTCGCGCGTGGCCGCGTGGCG
ATCGGACGGCGCGGAGCACGTCGCGCCGTAAGGAGTTGCACCGCACGTTCGTGCGGTATATTCACCGAACAGCACATCCT
GG------TAGATTGGAGTCGAACCGTCCGAGAAGGCAGTGCCCGCCGCCGCCGCCGCCCCCGCCCCCTCAATCCCCCTG
CCCCGCCGCCCAACTCCCTCCGCCTCTCGCGCGCGTCGCCGCCCACCGCGCCCCTGCCGTCTCGACCCCGTCCGCAATCT
CTCTCCACTGGGTTTCGAGGTATGAGCTTTCGTTCATCCACCGATTAGTTAAACCCTACCGATCTCCCCAATTTCTGGGC
GCATCTAGATCCGTCCCTGTTGCTAAATCGCGGTTGCCTGTCTGTTTTACCCGTCGATGCAGGGGAACATGGCGAGGCTG
GTGTCGTCTTCCCTCCTCAGGGGGCTCGCGCGGTCGTGCCGCGCGCCCAGCACGGCGGTAAGTGCCGGCACCTTCATCTG
-TTCATAGTTCTGAGCTTTTCCCGATTTATTTTCGCTCAACTGGTCCGAGCTCTGATCGAGCCCCAAAATCCCCAAATTG
CTGTCAGGTTCATTGGGACCTAGTAAGCTAATCGGTTCACTCGTTTACAGTTGCATAAATTTAATGTTACATTCATCTGT
ACCATCTC----------TCTATCACGAGATTGTTTGATAAGAGCTATCATGATGACCCTGGTTTTCACCTTTTTTTAAA
GCATATCATGTCTAGAGATGAGACTCCGGTGGCCCCATATATTTTAACCAAAAATCCACATGTGTAGAGTTGAGCTCATT
TCAGCATTTGCCATGACCATTTGTGCTATAAGGCAGCCATTATTATGTCTGAATGGATGTTATGGATGCTATAGTTCTCT
ACCAAGTGGTTTCCTGTAAACGTGTTCCATTTAAATGGGATGTTTATGCAACCTGTTTAATGCTGTACGCCTGCATGGAG
AGTGCTTCGGTGAGGCTGGAGCCACCTCCCGGCTCTGAGCCTTATAATGCTATAAACTGGTGGTTG-TTTGGTTTCATTT
TAAATGGAACAGTGTCTATGAGATTTAAAGAAGGTTACATGGTTAGTTTCAGCTTAGACTTGCAATGTTATCACAGTTGA
GGTTTTCTCGTTAGCTTCTGGGCATCAA--------TTGTCCTTTTTGCTCTGTGCTTACACTATAGTATTTTCAAGCTT
TATTTTGCTTCCAGTTTATCAAAGAACCAACCAATGTTGCACTATCAGCTTTTGTCAAGCAAAATCAGATTGTTTCTGTT
TTGATTTTGATCTCATGTTTGCACAATGACCTTGTTTTG-CATGATAACTGGAAAAGCAGACCGTGTCACGACCAGCTTT
CCAACAGTTCATGAACTACTCATCAGGAATCAGTGGTGATTCTAACGTGAATGGCGGCACAAGTGCAACACGAGTAACCG
CTGATACTGATACACATCAAGATTTCCAGCCTACAAGCAAAGGTTCTGACATGTCTTTGCAAGACATCGTTGCTCAGGTA
TTTATATGCACACATGAGCTTCAGAACATTTATATTCAATCTCTTGAAATGTAACAAAAATACGCATGGCATGAAAATTG
TAAAGCTTAATGTTGTGTCATATTCTTCTGCTGTTAATTAATTTCCTTGATGAAATCTTTGCCAGGATATCAAGGAGAAT
CCAGTCGTTATCTTCATGAAGGGTTATCCTGAAGCTCCCAGGTGTGGATTTAGTGCACTGGCAGTTAAGGTCCTCCAGCA
ATATGGTAAGCTATATCTCAGAACCAGCTCTCAGTCAATTGTGCCCCTGAAATCCCTAAATCATATCTTGTCTATTGCAG
GCGTCTCTATCACTGCCAGAGATATTCTGAGTAATATGAAGCTCAAGGAGAGTGTCAAAGCTTACTCGTAAGTTGCTCGT
CATAACCTCCCTGATGTTGTACTTTCAGTTTTAGATGGAAGACAATTGTCTCAAAAAGGAAAAAAAAAAAAGGAACTAGC
CATG--------------------------GGAATAGGGTATGGGATGATGTGGTAAAGAAAATATTTTACTATGGGTTA
AGATTTAGCTTCAACAACAGATGATAAAACATACAGAATATGATTTTGATTTA-GC----TGGAGGCTTTACTTGGAACA
GA-TTCGTCGAAAACATGTTGTGTGCCCTTGATTACAACATTGGAGAGTTCTACTTAATGTTCAACTTTCAGAGTTCCAA
TTTTATTCAGTTTCATTCATATGCATCATGGCGGAAATGACAAATGGATAATTTAACACCTGTTGCTAAGCTGCCGGGGT
TTACAAATTATGTATCTCCTGATGGTATCATTATTAAAGCTACTGTTTGTTTGTGCAGTAACTGGCCTACCTTTCCGCAA
ATATTTATCAACGGGGAGTTCGTTGGGGGCTCTGACATCATATTAAGCATGCACCAGGCAAGTGAAC-------------
-------------------GGATCATCACTATTTCATTCAGCATGTGTATCCAGCTGGTATCTTTCACTTGGTGGTTGAC
TTATTCTCTA--AATTTTCTTCAGAAAGGGGAACTTAAGGATTTACTTGGTGATTCCGCACAAAAGGGCGAGCAAGACAG
TGCCCAGTGAAACAAGCTACAGT-TGTTAGCATTTGCATGGAGATGGATGCTTCCTCTCTGAGTACTCTTTTACTCGACG
CTCTTCCTGCGGTGTTCTGTTGTTTTGACGCAGGATTTTCATCGTCGTGTTGCCAGCCATGATGGAAATCTCTCGGTTCC
AAGAGCATCCAAGTTTTCGCTTCATGACAAATAAATGCCACTTTTTCAATACTCTGTTTTTTGTACGTTGTAATAGTCAG
GTGATTTCGTTTGGATTCTG--TACTTTGGGCTCCGTTTGCGTTGCAGTAATAAATGGTTAGGCTGTTACTTTGTACTTT
TTTTTGAAACAAGTTACTTTGTACTTTAGGCTGCTTTTCTATTCCGCGAAGTTAATTTTGTTTGTGTAATCACCTGTTTC
CACCGCGAGCGCACCATCGATTCAAAGGCTTGTGGGGTAGTTATTTATGCTGCTTTTCTATTCTGCAAAGTTAATTTTGT
TTGTATAATCATCCGTTTCCACCGTGAGCGTACCATCGATTCAAGGCTTGTGGTGTTGCATTGTCTGAATACAGAACTTA
CCTGTGTAATGCATCTTGCTTGTATAAACTTACAGCATAAAACCTGCCCAAATCGAAGAGCAAGGTAGTGACAACTATGT
CAAGGGCGGATTTTGGGTTGTTTGGAATAATCAAAACAGCCAGGTGA---------------------------------
-------------------------------------------------TAATTTTTAAAAATTCTAAAAGCAATTTAA-
TTTTTGTAAAAAGGCCCCTAGATCCATTATAAAGGATCAT----------------------------------------
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-----------------------------------------------------------CAACAATACAAAGGACCCAAA
CAAACTAGAAATTATATTCCAGTCCATAGAGCACCAAACAAATTTATCCACCAAAACGAGC---CGCCGCCACCGCGTCG
CACTTGAAGCCGGCC------------------ACTCCGATCTACGGCCCTGAAGGACCGGCGCACAGGTAGAGCCGCCG
CCATTGTCGTCGTCGCCGTTGAATAAACCAGGATCACGAACCACGCCTACGCCTAGATCCAGCGATACG------AAGAC
CGGCGCCCACACAACGCCTTGCGCTCCTCAACGTCGATGATGAAACCTCCTCCGGGGAGGGCGAGGTGGACAAGGAGCCA
GGGGAAACTTATTCTTCTCGGCACCGC------------------------CGTCGTCGTCGCTGTTGAAGAAACCTGCA
CATGATCACGAACCACTCCTACGCCTAGATCCACCGTTGAAGAAACCTGCACAGGATCACGAACCACTCCTACGCCTAGA
TCCACCAATCCGAAGACCGGCGACCACACAATGCCTTGCGCTCCTCAGCGCCGACGATGAAACCGCCTTCGGCGAGGTGG
ACAAGGAGCCAGGAGAAACTTATTCTTCTCAACACCGGCATCGCCATCACCGCGCCGCCGCAAGAAAGCTAAACCTAACC
CTACGACCCTATCCACATCACCGACACGGCCAACTAGG----------------------------------AGGAGGGG
ACACACGAACCTGTCGACGGGGAGCGGGCGGGTTGGAGGAACTACCCTGCCGCCTCTCTTTTCGCGAGAGAAGAAAGGAA
AACTGGCAAATGTTAAATCCTGAAAACAATTTATGGGTACATATTGTTGGATCTAGTATAACACTCAAAATCTGTGCCAA
AAATATATAAGGTTGTATCATCCACAAAAGAATCTAAATAGACTGTAAGAAAAAGAGAAGCATCTCCAACAACTGAGTCT
CAAAAAGATAA-CGAAACAGCATGTAAATGC----AATTTGTTCTGCAAATGTCATCCACAAAA-TATTTAGAGAAAAAA
GTTGAAACTTGAAATGTGAAAACTGAACCAGGACCCTCCTTTTCCAATGGCCC-----CAAACAACTCCTTATG------
---------------AAGCTCGAAGGACA---TAGTAGTGTTTCTTGTTGCACTGTAACTTCGACTCTCTGCTATGTAAC
CCTCCTTCTGGG--------------------------------------------------------------------
---TTTGCTATCAACAATGCAACTTGTCTATCTTATGAATGTTTGTTTTTCTCTAACAACAATGCAAACTGTCATATCTT
GTGAATGAAACTTCCCTTTACAATACATATATATGTCTCATTAAGCACGTGTGAGATCTC
>chr3D_613
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-------------------------------------------------------------------GTACTCCG-----
TTTGCTTCAGTGCGAGCTTGGCCGCGTCGTGGATCACCAAGGTGGCGTTTGGTTGGAGGGCGAGGGTGGATTGGCTGAAG
ATATCCCTAGCCAACTGGTTAGGGATAGCCACATTTTGTTGTTTGGTTGCAAAGATGAAATGTGGTTAGGGATAGCCACT
TGTATGTTTGGTTGAGAGGATTATGTGTGGATAGGTTGTCGTGTTGACCTTTTTCTTAGAGTTGTGAGATTACCTCTGTT
ACATGCAATCATGCAATATGTTGTTTCATAAATGGGTATAATTCCATTCAAAGATAAATATGTTGTTTTAGAAAAACCTT
ATATCAACTATCCGATAACAAAGGAAACAAAACCAAAACATGTTGTTATTATAAAAATTATTCAGAAAAGTAAACAACAT
GTGCACTTGTGAAAGCGCACGCGCACACACATGTTGCACTTACACTAGCCCCGCTTCTGCCAACGTAAACAACATTGTTA
TTGTTCTATTCACAAACAAGATGATCATTTGTTCTGAATATTCAGTGCTCTTGTTGGCGTTGGCCTGCCTAACCACATAC
AGATGAAGCATTACCTATTTTTTCATATGAGAAGAAGCATCCCAGGCCCATCCCTCACCGCCACACCACCCAGCTCTCCA
TCGACTTCCTTCCTCGCCATCTTGTCCACCACCAGCCCCCTTACGCCTGGTGTCGACGTGAGCTGTCGGAGCTCACAAAT
TACGACCATGTCGTTCCAGCGGGAAGGAGAGAAGGGAGAGGGACCGCCGCCTTTCCTCAACTATGCCACCACCCAATTAA
AAATCCCACCCGCTGCCGCTGTCGCTATTTTCATTCGAGAGCGAGCAGGGCGTGAGGATTATGTTCAGGAGGTGGGAGTT
GGGGAAACCGTTTCAGCGACGAGAACGCGAGTGGCTGCCCTCGTCCGTGAGAAGAATATGACGGCTCTCGTCAACCAGGT
TTTACACCGAATATTCTCTAAACATGGCTGCTCATATCCACGGTATCCTCTCTTTCAAACGGCTGGTATCATCCTAAAAT
ATGGCTATCCCTCATCCACCCATGGACAGCCAGCAAACCAAACGGCCCCCAAGTCATCATCCTGATCCCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------------
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----------------------------------AAGAAGTCATCATCCTGATGAAGAGCGCGCGCGTGGC--------G
ATCGAACGGTGCGGAGCACGTCGCGCCGTAAGGAGTTGCACCGCACGTCCGTGCGGTATATTCACCGAACAGCACATCCT
AGTACTCCTAGATTGGAGTCGAACCGTCCGAGAAGGCAGTGCCCGCCG------CCGCCGCCGCCCCCTCAATCCCCCGG
CCCCGCCCCCCAACTCCCTCCGCCTCTCACGCGCGTCGCCGGCCACCGCGCCCCTGCTGTCTCCACCCCGTGCGCAATCT
CTCTCCACTGGGTTTTGAGGTATGAGCTTTCGTTCATCCACCGATTAGTTGAACCCTACCGATCTCCCCAATTTCTGGGC
GCATCTAGATCCGTCCCTGTTGCTAAATCGCGGTTGCCTG-CTGTTTTACCCGTCGGTGCAGGGGAACATGGCGAGGCTG
GTGTCGTCTTCCCTCGTCAGGGGGCTCGTGCGGTCGTGCCGCGCGCCCAGCACGGCGGTAAGTGCCGGCACCTTCATCAA
CTTCATAGTTCAGAGCTTTTCCCCATTTGTTTTCGCTCAATTGGTCCGAGCTCTGATCGAGTCCTAAAATCCTCAAATTC
CTGTGGTTGG--TTGGGGCCTGGTAGGCTAATCGGTTCACTCGTCTAGAGTTATATGAA-TTTATGTTATATTCATCTGT
GCCATCTCTCTAAGTGATTCTATCACGAGATTGTTTGATAAGAGCTATCATGATGACCCTGGTTTTCACTTTTTTTTAAA
GCACATCATGTCTAGAGATGAGACTCCGGTGGCCCCATATATTTTAACCAAAAATCCACATGTGTAGAGTTGAGCTCATT
TCAGCACTTGCCATGACCATTTGTGCTATAAGGCAGCCATTATTATGTCTGAATGGATGTTATGGATGCTATAGTTCTCT
ACCAAGTGGTTTCCTGTAAACGTGTTCCATTTAAATGGGATGTTTATGCAACCTGTTTAATGCTTTACGCCTGCATGGAG
AGTGGTTTGGTGAGGCTGGAGCCACATCCTGGCTCTAAACCTTATAATGCCATAGACTGGTGGTTGTTTTGGTTTCATTT
TAGATGGAACAGTGGCTATGAGCTTTGAAGAAGGCTACATGGTTAGT-TTAGCTTAGACTTGCAATGTTATCACAGTTGA
GGTTTTCTATTTAGCTTCTGGTCATCTA--------TTGTCCTTTTTGCTCTGTGCTTACATTATAGTATTTTCAAGCTT
TATTTTGCTTCCAATTTATCAAAGAACCAACCAATGTTGCACTATCAGCTTTTGGCAAGC-AAATCAGATTGTTTCTATC
GTTATTTTGATCTCATGTTCGCACAATGACCTTGTTTTG-CATGATAACTGGAAAAGCAGACTGTGTCACGACCAACTTT
CCAACAGTTCATGACCTACTCATCAGGAATCAGTGGTGATTCTAACGCGAATGGGGGCACAAGTGCAACACGAGTAACTG
CTGATACTGATACACATCAAGATTTCCAGCCTACAAGCAAAGGTTCTGATATGTCTTTGCAAGACATTGTTGCTCAGGTA
TTTATATGCACACATGAGCTTCAGATCATTTAGATTCAAGCACTTAAAATGTAACAAAAATACGCATCACATGAAAATTG
TAAAGCTCAATTTTGTGTCATATTCTTCAGCTGTTAATTAATTTCCTTGATGAAATCTTTGCCAGGATATCAAAGAGAAT
CCAGTCATTATCTTCATGAAGGGTTATCCTGAAGCTCCCAGGTGTGGATTCAGTGCACTGGCAGTTAAGGTCCTCCAGCA
ATATGGTAAGCTATATCTCAGTACCAGCTGTCAGTCAATTGTGCCTCTGAAATCCCTAAATCATATCTTGTCTATTGCAG
GCGTCTCTATCACTGCCAGAGATATTCTGAGTAATATGAAGCTCAAGGAGAGTGTCAAAGCTCACTCGTAAGTGGCTCGT
CATAACCTCCTTGATGATGTACTTTCAGTTTTAGATGGTAGACAATTGCCTCAAAAAGGG-----AAAAAAGGAACTAGC
CATGTGTAGCACTCGAGATTCTGCATCATGGGAATAGGGTATGAGATGGTGTGGTAAAGAAAATATTTTACTATGGGTTA
AGATTTAGCTTCAAG---AGATGAT-AAACATACAGAATATGATTTTGATTTAAGTTAGTTGGAGGCTTCGCTTGGAACA
GATTTCGTCCAAAACATGTTGTGTGCCCTTGAT--CAACATTGCAGAGTTCTACTTAATGTTCAACTTTCAGAGTTTCAA
TTTTATTCAGTTTCATTCATATGCATCATGGCGCAAATGACAGATGTATAATTTAACACCTGTTGCTAAGCTGCCGGGAC
TTACAAATTCTGTATCTCCTGATGGTATCATTATTAAAGCTACTGTTTGTTTGTGCAGTAACTGGCCTACCTTTCCACAA
ATATTTATCAACGGAGAGTTCGTTGGGGGCTCTGACATCATATTAAGCATGCACCAGGCAAGTGAATGGATCATCACTAT
TATTATTATTTTTGACTGTGGATCATCACTATTTCATTCAGCATGTGTATCCAGCTGGTATCTTTCACTCGTTGGTTGAC
TTGTTCTCTATAAATTTTCTGCAGAAAGGTGAACTTAAGGATTTACTTGGTGATTCCGCACAAAAGGGCGAGCAAGACAG
TGCCCAGTGAAACAAGCTACAGTATGTTAGCATTTGCATGGAGGTGGATGCTTCCTCTCTGAGTACTCTTTTACTCGACG
CTCTTCCTGTGGTGTTCTGTTGTTATGACGCAGGATTTTCATCATCGTGTTGCCAGCCATGATGGAAATCTCTCGGTTCC
AAGAGCATCCAAGTTTTCGTTTCATGACAAATAAATGCCACTTTTTCAATACT--GTTTTTTGTACGTTGTAATAGTCAG
GTGATTTCGTTTGGATTCTATATATTTTGGGCCCCGTTTGCGTTGCAGTAATAAATGGTTAGGCTGTTAC----------
--------------------------------------------------------------------------------
------------------------------------GTAGTTATTTATGCTGCTTTTCTATTCTATGAAGTTAATTTTGT
TTGTGTAATCATCCGATTCCACCGCGAAAGCACCATCGATTCAAGGCTTGTGGGGTTGCATTGTCTGAATTCAGAACTTA
CCTGTGTAATGCATCTTGCTCGTATAA---------------CCTGCCCAAATCGAAGAGCAAGGTAGTAACAATCCTCT
CGAGGGCGGATTTTGGGTTGTTTGAAATAATCAAAACAGATGTGCAATAATT----------------------------
----------------------------------------------------TTTTTTTAAATTCTGAAAACAACTTTAA
TTTTTGTGAAAAGGCCCCCAGATCCATTATAAAGGATCAACAACAATAGAGATAAGCTCATATTATAACCTTGAACTACC
ACTGAAGTCTAAAACACAAAACACAATCCTGAACTATGAAACCGTCTAATATACAACCCTCAGCTTCCAAAACCAGGGTT
GGTTTTGACCAGTCAACAGACTAGTCGGCGCCAAGTTGTACGCATGTCACCATCTCCTAAATCTAAAATTTGCTTCTATT
ATTTTATCCAGTGGGCATAACTTCTTGAAACTTTCACAGATTGAAAACTTTCTTTTGGCCAAAATTTGAATCAAAAAGTC
TGAATTTGAATTTTTGCTCTAGCTTTTTTTTTATACTTGGCAACACTTGTTAAGACTTTCCCAGATTGAATACAATGGTT
GTGGATTTTTGAGAATTTTTTCTAGGAGCTTTTTTTTGGCCAAAATTTGACCCAAAAATGAGTTGGCGCTGACTAGGCGG
TCAAAACCAGTCAAAAACAACCCCCAAAGTTGTTTTTTGTCCGTTTTTTGAAAGTTCTGTGTTGTAAATTAGACGGTTAG
TTCAGAGTTGCGTTTTAAACTTCGGTGATAGTGCAAGGTTGTAATATGGACTTATCTCACAACAATACAAAGGATCCAAA
CAAACCAGAAATTACATTCCGGTCCATAGAGCACCAAACAACTTTATCCAGCAAAACGAGCCGCCGTCACCGCCGCCTCG
CACCTGAAGCCGCCCCGCCTGGCGGACGGGAAAACTCCGATCTACAGCCCTGAAGGACCAACGCATCGGTAGAGCCGTTA
T---------------CGTTGAAGAAACCAGGATCACAAAGCACTCCTACGCCTAAGATCCATCGATACAAATTAAAGAC
CGACGACCACACAACGCCTTGCGCTCCTCAACACCGACGATGAAACCGCCTCCAGCGAGG------TGGACAAGGAGCCA
GGGGAAACTTATTCTTCTCGGCACCGCTGTCACCACCACCGGTAGAGCCGTCGTTGTCGTCGCCGTTAAAGAAACT----
-----------------------------------------------TGCACAGGATCACGAACCACTCCTACGCCTAGA
TCCACCGATCAGAAGACCGGCGACCACACAATGCCTTGCTCTCCTCAACGTTAACGATGAAACCGCCTCCGGTGAGGTGG
ACAAGAAACCAGGGGAAACTTATTCTTCTCACCACCACCGTCGCCACCACCGC--------AAGAAACCTAAACCTAACC
GTACGGCCCTATCCACATCACCGATGCAGATCCGGGGTCCCCTCCTCCTCCAGTCACCGGCACGGCCGACGAAGGAGGGG
ACACACAAACCCGCCGAC-GGGAGCGGGCGGGTTGGAGGAACTGCCCTGTCACCCCTCTTTTCGCGAGAGAAGA------
----------TGTTAAATTCTGAAAACAATTTATGGATACATATTGTTGGATCTAGTGTAACACTCAAAATCTGTGCCAA
AAATATATAAGGTTGTATCATCCACACAAAAATCTAAATAGCCTGTAAGAAAAAGAGAAGCATCTCAAACAGCTGAGTCT
CAAAAAGATAACCAAAATAGCATGTAAATGTAATTAATTTGTTCTGCAAATGTCATCCACAAAA-TATTTAGAC-AAGAA
GTTGAAACTTGAAATGTGAAAACTGAACCAGGACTCTCCTTTTTCTATGGCACAAACA------ACTCCTTATGCCCTCT
TGGTGGCTGATGCTGAAGCTCGAAGGACATACTAGTAGTGTTTCTTGTTGTGCTGCAACTTCGACTCTCTGCTATGTAAC
CCTCCTTCTGGG--------------------------------------------------------------------
---TTTGCTATCAACAATGTAACTTGTCTATCTTATGAATGATTGT----------------------------------
------------------------------------------------------------
>SNPs
---------------S----------------------------------------------------------------
---------------------------------------------------------------S---S------------
-----------------------------------S------S----S--------------------------------
--------S---------------------S-----------------------------S---------S---------
---------------------------S----------S-----------S-----------------------------
--------------S-S--------------S--------------S----------------S--S----S--------
----S------------------S--------------------------------------S--------S--------
-S----------SSSS-------------------------------------S--------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------SS---------SSSSSSSSSS-
--------------------------------------------------------------------------------
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------------------------------------------S-------------------S--S--------------
--------------------------------------------------------------------------------
---S-------------------------------------S--------------------------S-----------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
---------------S---------------------------S------------------------------------
-------------------------------S------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------S-------------------------------------------SSSSS--SS-
S-------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------SSSSSSSS----------S---------------------------------
-------------------------------S-------------S-----------------S----------------
-S------------------S-----------------SS--------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------S-----------------
-----------------------------------S-------------------------------------S------
------------------------------S-------------------------------------------------
---------------------------------------S---------S----------S--SS---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
-----------------------------------S--------------------------------------------
--------S-------------------------------S---------------------------------------
-------------------------------S-------S--------------------------S----S------S-
------S-------------S------S---S-------------S----------------------------------
----------------S----------------------------SS-SS------------------------------
-------S--------------------------------------------------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------S-----------------
-----------------------------------------------------------SSSSS--S-S--SSS------
-------S-----------S----------------------S------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--S-----------------------S
----SSS----S------------S-------------------------------SS-------S-----S------S-
--------------S----SSSSS--SSSS-S----------S--------S----------S---S-------------
--------------------------------------------------------------------------------
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---------------------S----------------------S-------------------S---------------
---------------------------------S----------------------------------------------
-S-----------------------------------------------------------S------------------
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS-------------------------------------------SSSSS-S------S--------------------
-------------------------S----------------------------------
>forward_543
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------ATCCTGTTGGGTTGGTTCCG-----------------
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>reverse_4394
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-------------------------------------------------------------------------GTTGCAG
GCGTCTCTATCACT------------------------------------------------------------------
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>forward_2842
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----------------------TGAGCTTTCGTTCATCCACG--------------------------------------
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>reverse_4544
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---------------------------------------------------------------GGAAAAAGGAACTAGCC
ATGGG---------------------------------------------------------------------------
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>forward_4303
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-------------------------------------------GTGGATTTAGTGCACTGGCT-----------------
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>reverse_5832
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-----------------------------------------------------------------------TTCCGTCGA
GGGCAGATTTT---------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------
