>input_sequence_32578
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----ATGGATTTTGGGGCAGAGCAGCACGGGTAAGCAAATCAAATCAAACCAACCAGCTTTTCGGTTCGAGACTCAGAGA
TGGTCTCTGTCGGGTTTGCCGCTGATTCG-TGGTTTCCGGGTGAAGCTGCGAGCATTACACGAGGAGGTGCAGGATACGG
GCGCCCTGCTGCGGCGAGGTCTTCGGCTGCCGGCATTGCCACAACCAAGCTAAGGTCTGCATAGAGCACC-CTTTTCTTT
CTCGCC-------AACGCCAACACCATGCCGCGCGATTTCGCGGTCG----CTCGGGCTGTGCTCTGAATTCGGACAAGT
TCTGAAACATTTGGGCC------T----GTTGCTGCAGAATTCGCTGGAGGTGGACCTCCTCGACCGGCACGAGATCCCC
CGCCACGAAATCAGCAAGGTGCGTGCTCCT----TATCCCCCTCTCTTACTGAATTGAACCCCAGTCATTCCATGTCTTG
CTGTATGCCTTCGACCTTCTT---C---CTCCTCCTCCACTCGGGTACCGGCGGTAGAATTGCAATCCCACTTGCCCACT
CCCTTCCAATCCGATGGTTATGGCTGTGCACGCATGGACAGTTCCAAGGCACCAACTGCCATGCAGTGGCCAAGGGAGCC
CGGTCGCCCATCCC-AAGATCTTTTTTCCGCCCCGTTTCGTCAGATAA-------GGTTTATC-----TTGGATGACCCG
CCGGGTCTTGATATTTCTGTTTTATATT-CGATTCTCGCCATCAGAATCGGCGCAAGTGGCCGGCCGGC----GTGGTCA
TCGACTCCACATGATTGTTAGGTAGGTCCATGCGGATGCGACGATGTGTCGGCGTCACCACAACGAAGGCGGCTTGGAGA
AAGGGGAAAGTGGAAGAAATGGAAAAGACAAAGGATACTTCGCTGTCAATCAAGATTAATTTTCGATTTAACGGCACTTC
ACTGATTGAGCTGGCGCATAATTGAAGGCCATGATTGCATCCTGTAGCCATGTA-CTAGCTAGCTCCACCATTTGTCCAT
GTCCACCACCTCTCTGGTCACATAATTATATTGGGCAATTATAGTGGACTTCTTATTGTCTCTCTTTTTTCTCTCCAAAG
AAAACTGTAGTCAGTAGGAATCATACGAACTCACATAGTTTATTCGCAAAAAAATATTAAAAAAATCACATAGTTACTGA
AGCTATTCTACTTTGTGATGTATCACAGGTTATCTGCTCTCTCTGCAACAAAGAACAGGATGTACGTATAATTCTACAGT
AATTTTCACCTTTTGACTGTACTAATGG-----CATGACATGACATGAAAACTGCT-CGTTTCGATCAACAGGTGCAACA
GAACTGCTCCGGTTGCGGGGCATGCATGGGAAAATACTTCTGTGAAAAATGCAACTTCTTTGACGACGATGTAAGCGTGT
TCACATTCCTGAGCCAAGGAATAGTTACTCTATTAAGCATTTTCATTTTCGATGTCTGACAGCTATGTTACCTTGTTATT
ACAGATCTCAAAGAAGCAGTATCACTGCGATGGATGCGGCATCTGCAGGCAAGAGCCTAATTTAATTTACAGCGATCCTT
CTTTTCGTCGAAACGTTTACTGTTTTTCTCTTCCAGAATGATCAAATGTTGGATACATTGTTCTCCTTTTTCAGAACTGG
CGGCATAGACAACTTCTTCCACTGCGAAAAATGCGGTGCGTTGGGTGTGAAAGTTACTGTGTTGTAAGCTTTTCATGGCA
TGTCTCTCCATTAAAGATGGCTCTAACAGCAATCATGTCCTTGTTCACTAACAGGGTGTTGCTACAGCAATGTTTTGAAG
GACTCTCATCATTGTGTGGAACGAGCAATGCATCACAACTGCCCTGTCTGCTTCGAGGTGAGGCTTTGCTCTAATCAAGG
CCCTAAACACTCCTGATTTAGCTATTCTTGATCTTTAAAGACAACCATGTTTTTGATTCGCAGTACCTATTTGACTCGAC
CATGGACATCAGCGTACTGCACTGCGGGCACACGATCCATTTGGAATGCCTGAACGAGATGAGGGTTCATCACCAGTAAG
CATTTCTTCAGACAATTGTTTGTTCACATGAAATGGACGAGATGCTCTGATCTGATCAAGATGCTTGGTTGGTTGGTTGG
TTTGTTTTCCCCAGCTTCTCGTGCCCGGTCTGCTCACGGTCGGCCTGCGACATGACGGATGCGTGGCAGAAGCTCGACCA
GGAGGTCGCCGCCACGCCGATGCCAGAGTTCTACCAGAAGAAGATGGTAAGCA---------------------------
---ACAAACCGACGACCACACC---------------------------------------------------------G
TGTAACCATCTTGCCAATGCTGGAACCTGAACAAACAGCGATGTGT---TTCTTCTTCTT---CTTCCAGGTATGGATCC
TCTGCAACGACTGCGGGGCGACGTCGAGCGTGCGCTTCCACGTCCTGGCGCAAAAGTGTCCTGGGTGCAGCTCCTACAAC
ACCAGGGAGACGAGGGGCGGCCCAGCTACAGCGGCGTGCTCCAGAGTCTGA-----------------------------
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>chr1D_1_TraesCS1D01G142100
TGCTTCGGTCATATCGTCAAGTAAAAGAGTTGACATGTGAGCGAGTTTATGGTTATGTCCACTGCATCTCAAAGGGAAAA
TCCTTTTTTTTTTGAAAATCTTCTGGGGTATTCCTTTTAAACTGGCCACAATGGGTAGTAACATAGATTAGTAACATGCA
CATGTTACTAGTCTATGTTGCTACCTCTATAGTGGGGAGTAACATATCTGA--TAACATGCAACACTTCATTTATTAGGT
TATAGACTCATTTTGCCTTGATATGTGTGATGTTACTCATACTACTAGTAAGACTACCCACAGTGGGAGTAACATAGGTA
GTAACATCACACATATCTAGATAAAATAGATGATGTGGCAAGTAATAAATGAAAAAAAAGACAT--GTAGTAACATAACT
AGTTACTACTAGTATGAGTAACATCACACATATCAAGATAAAATGTGTCTATGCC-TAATAAATGAAGTGCTCCATGTTA
CCACACATATGTTACTTCCCACTATAAAGATAATAACATAGACTAGTAATATGGGCATGTTACTAGTATATGTTACTACC
CATTGTCATTCATTTCTTT-----------------------ATTTATTGCTTGCCACATCATCTATTTTATCTAGATAT
ATGGGTGATGTTATTATTTATGTTACTCCCATTGTGGATAGTCTCAGTACGTTATAGAGAGTATTGTACTTG---GGATT
CACATCATGGAAAGAAGGTGGCGGCCATCCCATATGCTGGAA-------CACAAACAAAACTTCAGC-------------
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-----------------------------TCCTGAATGAAATGAAAAAACAAAGAAGCTGGTCCAGGTCCAGCCCCTCTC
T-----GCCTATATATCCGGCCCGCGTCCCGCGCTTCTCCTCCAACACGC---------GCTCCCCATTC-TTCTTATTA
ATTCCCGC-------------------GTGCGCGGACGTACGGCAGCGAGCCTCTCCCGGACTCCGATTCCT---TCCTT
CCTTCCGGCGGAGGTGTCGGC-------TCTCCTCTCCCCTCCCAGAGAGAGGAAACCCGGAGGAAGCAGAGACGGCCGG
ACAGATGGATTTTGGGGCAGAGCAGCACGGGTAAGCAAATCAAATCAAACCAACCAGCTTTTCGGTTCGAGACTCAGAGA
TGGTCTCTGTCGGGTTTGCCGCTGATTCG-TGGTTTCCGGGTGAAGCTGCGAGCATTACACGAGGAGGTGCAGGATACGG
GCGCCCTGCTGCGGCGAGGTCTTCGGCTGCCGGCATTGCCACAACCAAGCTAAGGTCTGCATAGAGCACC-CTTTTCTTT
CTCGCC-------AACGCCAACACCATGCCGCGCGATTTCGCGGTCG----CTCGGGCTGTGCTCTGAATTCGGACAAGT
TCTGAAACATTTGGGCC------T----GTTGCTGCAGAATTCGCTGGAGGTGGACCTCCTCGACCGGCACGAGATCCCC
CGCCACGAAATCAGCAAGGTGCGTGCTCCT----TATCCCCCTCTCTTACTGAATTGAACCCCAGTCATTCCATGTCTTG
CTGTATGCCTTCGACCTTCTT---C---CTCCTCCTCCACTCGGGTACCGGCGGTAGAATTGCAATCCCACTTGCCCACT
CCCTTCCAATCCGATGGTTATGGCTGTGCACGCATGGACAGTTCCAAGGCACCAACTGCCATGCAGTGGCCAAGGGAGCC
CGGTCGCCCATCCC-AAGATCTTTTTTCCGCCCCGTTTCGTCAGATAA-------GGTTTATC-----TTGGATGACCCG
CCGGGTCTTGATATTTCTGTTTTATATT-CGATTCTCGCCATCAGAATCGGCGCAAGTGGCCGGCCGGC----GTGGTCA
TCGACTCCACATGATTGTTAGGTAGGTCCATGCGGATGCGACGATGTGTCGGCGTCACCACAACGAAGGCGGCTTGGAGA
AAGGGGAAAGTGGAAGAAATGGAAAAGACAAAGGATACTTCGCTGTCAATCAAGATTAATTTTCGATTTAACGGCACTTC
ACTGATTGAGCTGGCGCATAATTGAAGGCCATGATTGCATCCTGTAGCCATGTA-CTAGCTAGCTCCACCATTTGTCCAT
GTCCACCACCTCTCTGGTCACATAATTATATTGGGCAATTATAGTGGACTTCTTATTGTCTCTCTTTTTTCTCTCCAAAG
AAAACTGTAGTCAGTAGGAATCATACGAACTCACATAGTTTATTCGCAAAAAAATATTAAAAAAATCACATAGTTACTGA
AGCTATTCTACTTTGTGATGTATCACAGGTTATCTGCTCTCTCTGCAACAAAGAACAGGATGTACGTATAATTCTACAGT
AATTTTCACCTTTTGACTGTACTAATGG-----CATGACATGACATGAAAACTGCT-CGTTTCGATCAACAGGTGCAACA
GAACTGCTCCGGTTGCGGGGCATGCATGGGAAAATACTTCTGTGAAAAATGCAACTTCTTTGACGACGATGTAAGCGTGT
TCACATTCCTGAGCCAAGGAATAGTTACTCTATTAAGCATTTTCATTTTCGATGTCTGACAGCTATGTTACCTTGTTATT
ACAGATCTCAAAGAAGCAGTATCACTGCGATGGATGCGGCATCTGCAGGCAAGAGCCTAATTTAATTTACAGCGATCCTT
CTTTTCGTCGAAACGTTTACTGTTTTTCTCTTCCAGAATGATCAAATGTTGGATACATTGTTCTCCTTTTTCAGAACTGG
CGGCATAGACAACTTCTTCCACTGCGAAAAATGCGGTGCGTTGGGTGTGAAAGTTACTGTGTTGTAAGCTTTTCATGGCA
TGTCTCTCCATTAAAGATGGCTCTAACAGCAATCATGTCCTTGTTCACTAACAGGGTGTTGCTACAGCAATGTTTTGAAG
GACTCTCATCATTGTGTGGAACGAGCAATGCATCACAACTGCCCTGTCTGCTTCGAGGTGAGGCTTTGCTCTAATCAAGG
CCCTAAACACTCCTGATTTAGCTATTCTTGATCTTTAAAGACAACCATGTTTTTGATTCGCAGTACCTATTTGACTCGAC
CATGGACATCAGCGTACTGCACTGCGGGCACACGATCCATTTGGAATGCCTGAACGAGATGAGGGTTCATCACCAGTAAG
CATTTCTTCAGACAATTGTTTGTTCACATGAAATGGACGAGATGCTCTGATCTGATCAAGATGCTTGGTTGGTTGGTTGG
TTTGTTTTCCCCAGCTTCTCGTGCCCGGTCTGCTCACGGTCGGCCTGCGACATGACGGATGCGTGGCAGAAGCTCGACCA
GGAGGTCGCCGCCACGCCGATGCCAGAGTTCTACCAGAAGAAGATGGTAAGCA---------------------------
---ACAAACCGACGACCACACC---------------------------------------------------------G
TGTAACCATCTTGCCAATGCTGGAACCTGAACAAACAGCGATGTGT---TTCTTCTTCTT---CTTCCAGGTATGGATCC
TCTGCAACGACTGCGGGGCGACGTCGAGCGTGCGCTTCCACGTCCTGGCGCAAAAGTGTCCTGGGTGCAGCTCCTACAAC
ACCAGGGAGACGAGGGGCGGCCCAGCTACAGCGGCGTGCTCCAGAGTCTGAGCGCCAGGAGGAGACGACAGTACAACAGA
CACTACTCACTCATAGTCACAGCTGTGACACTACCAAGGATCTGGTCAAGATGATGGGGGCATTAGAGCTAGCTTGTAGG
TTGAAGCTGCGAGTGCTTGCTGCAGTAGGAAGCACAGGAGAGTCACGCGTCTCCTCTTGCGAACAAGCCAGGAATTGCTT
GCCGTCGCCGACAGGGAGGCCACCGCGGTTGCTCATCGCAATTCGGAGAACAACAAAACTCGATGCGCTTGCATAAATCC
GGAGGAATGATTTAC--------------CGCTTGATCATCCCCTCTGATATGTATGAGTTGTTGTGTGGTACATGACCC
TGTCTAGGGAGCTCCTGTAAGGCTATGAAACAATTACACACCAGAAAGAAAACTTGTTCTTCTTTCTGTTAGAACTCCAT
TGCTCCTTCGATGTCTACAAGCAACAGATTGCACCATGCACTGATGCACACCAAAACATGCTTCTGTGATCTGTCTGATA
TTCTGATTGCTT-GCATGAAGCAGAAATGTTTGTAACAGTATCGAACTTCAAAAAATAAATACGGGCCAGTATTCTAGAA
ATACACGGGCCAGCATAGTGGGCCTTATTTTCACTGCCCATGCAAGGCCTAACTAACTATTTCTTCTACACTGGGCCACT
C-------------------------------------------------------------------------------
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-----------------GTGCATTATGTCCAAACGAGAGGAAAAGGCCATG-----------------------------
------TTGCTGCGTCAGCCGTTCACTGCAACCCGCTCATTTGCAACTTGAG----CTTTTTTTTTGCGGGGGGAAAAGA
GTTTTATTCCAAAATGATAGGGTTACAATAAAGAGGCAAGAGCTCATCTATACATGGGGGTACTCTGTGTAGCCATACAA
CAATGCTACACTCAGTACGACTATATGTCGCCAATCGATCTGCTACCCTATTTTGTTCCCTACGAAGCTTCTGAGGAATA
AACTTCCGGTTTCCCATCATTGCTTAGATTTCAGCAACTAGATGGCCATACGCTGAGCAAGCTAGGAGAGGTGCTTGGAG
A
>chr1A_22
---------------------TAAAAGAGTTGACATGTGAGCGAGTTTATGGTTATGTCCACTGCATCTCAAACGGAAAT
TCCCTTTTTTTAAGTCTTTTGGAGT-------------------------------------------------------
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---------------------------------------------AGTACATTATACGGAGTATTGAACTTG---GGATT
CACTTCATGGAAAGAAGGTGGCGGCCATCCCACATGTTGGAAGTTGGAACACAAGCAAAACTTCAAC-------------
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-----------------------------TCGTGAACGAAATGAAAAAACAAA-AAGCTGGTCCAGGTCCAGCCCCCCTC
TGCTCTGCCTATATATCCGGCCCGCGTCCCGCGCTTCTCCTCCAACACGCACAACACAGGCTCCCCATTCTTTCTTATTA
ATTCCCGCCGGGCGCGTGCGCGTGCGCGTGGGCGGGCGTACGGCAGCGAGCCTCTCCCGGACTCCGATTCCTTCCT----
---TCCGGCGGAGCTGATCGCATCTCCTTCTCCTCTCCC-------AGAGAGGAAACCCGGAGGAAGCAGAGACGGCCGG
ACAGATGGATTTGGGAGCAGAGCAGCACGGGTAAGCAAATCAAATCAAACCAAGCAGTTTTTCAGTTCGAGACTCAGAGA
TGGCATCTGTCGGGTTTGCCGCTGATTCG-TGGTTTCCGGGTGAAGCTGCGAGCATTACACGAGGAGGTGCAGGATACGG
GCGCCCTGCTGCGGCGAGGTCTTCGGCTGCCGGCATTGCCATAACCAAGCTAAGGTCTGGATAGAGTGCC-TTTTCCTTT
CTCGCC-------AACGCCAACGCCATGCCGCGCGTTTTCGCGGTCG----GTCGGGCTGTGCTCTGAATTCGGACAGGT
TCTGAAACATTTGGGCCTGTTTGT----GTTGCTGCAGAATTCGCTGGAGGTGGACCTCCTCGACCGGCACGAAATCCCC
CGCCACGAAATCAGTAAGGTGCGTGCTCCT----TATCCCCCTCTCTTACCGAATTCAACCCCAGTTCTTCCGTGTTTTG
CTGTATGCCTTCGACCTTCTT---CTTCTTCCTCCTCCACTCGGGTACCGGCGGTAGAATTGCAATCCCACTTGCTCACT
CCCTTCCAATCCGATGGTTATGGCTGTGCACGCATGGACAGTTCCAAGGCACCAACTGCCATGCAGTGGCCAAGGGAGCC
CGGTCGCCCATCCC-AAGATCTTTTTTCCGCCCCGTTTCGTCAGATAACTGATACGTAGGGTTTATCTTTGGATGACCCG
CCGGGTCTTGATATTTCTGTTTTATATT-CGATTCTCGCCATCAGAATCGGCGCAAGTGGCCGGCCGGCCGGCGTGGTCA
TCGACTCCACATGATTGTTAGGTAGGTCCATGCGGATGCGACGATGTGTCGGCGTCACCACAACGGAGGCGGCTCGGAGA
AAGGGGAAAGTGGAAGAAATGGAAACGACAAAGGATACTTCGCTGTCAATCAAGATTAATTT-CGATTTAACGGCACTTC
ACTGATTGAGCTGGCGCATAATTGAAGGCCATGATTGCATCCGGTAGCCATG----TAGCTAGCTCCACCATGTGTCCAT
GTCCACCACCTCTCTCGTCACATAATTATATTGGGCAATTACAGTGGACTTCTTATTCTCTCTCTCTTTTCTCTCCAAAG
AAAACACTAGTCAGTAGGAATCATATGAACTC-----------------------------------ACATACTTACTAA
AGCTATTCTACTTTGTGATGTATCACAGGTTATCTGCTCTCTCTGCAACAAAGAACAGGATGTACGTGTAATTCTACAGT
AACTTTCACCTTTTGACTGTACTAATGG-----CATGACATGACATGAAAACTGCT-CGTTTGGATCAACAGGTGCAACA
GAACTGCTCCGGTTGCGGGGCATGCATGGGAAAATACTTCTGTGAAAAATGCAACTTCTTTGACGATGATGTAAGCGTGT
TCACATTCCTGAGCCAAGGAATAGTTACTCTATTAAGCATTTTCATTTTCGATGTCTGACAGCTGTGTTACCTTGTTATT
ACAGATCTCAAAGAAGCAGTACCACTGCGATGGATGCGGCATCTGCAGGCAAGTGCCTAATTTACGGTC-----ATCCTT
CTTTTCATCAAAACGTTTACTGTTTTTCTCTTCCAGAATGATCAAATGTTGGATACATTGTTCTCCTTATTCAGAACTGG
CGGCATAGACAACTTCTTCCACTGCGAAAAATGCGGTGCGTTGGGTGTGAAAGTTACTGTGTTGTAAGCTTTTCATGGCA
TGTCTCTCCATTAAAGATGGCTCTAACAGCAATCATGCCCTTGTTCACTGACAGGGTGTTGCTACAGCAATGTTTTGAAG
GACTCTCATCATTGTGTGGAACGAGCAATGCATCACAACTGCCCTGTCTGCTTCGAGGTGAGGCTTTGCTCTAATCAAGG
CCCTAAACACTCGTGATTTAGCTATTCTTGATCTTTAAAGACAACCATGTTTTTGATTCGCAGTACCTATTTGACTCGAC
TATGGACATCAGCGTACTGCACTGCGGGCACACGATCCATTTGGAATGCCTGAACGAGATGAGGGTTCATCACCAGTAAG
CATTTCTTCAGACAGCTGTTTGTTCACATGAAATGGACGAGAGGGTCTGATCTGATCAAGATGCTTGCTTGGTTGGTTGG
TTTGTTTTCCCCAGCTTCTCGTGCCCGGTCTGCTCACGGTCGGCCTGCGACATGACCGATGCATGGCAGAAGCTCGACCA
GGAGGTCGCCGCCACGCCGATGCCAGAGTTCTACCAGAAGAAGATGGTAAGCCACAAACTTTTTTTTTGCGAGGTGGTAA
GCCACAAACTGACAACCACACC---------------------------------------------------------A
TGTAACCATCTTGCCAATGCTGGAACCTGAACAAACAGTGATGTGT---TTCTTCTTCTTCTTCTTCCAGGTATGGATCC
TCTGCAACGACTGCGGGGCGACGTCGAGCGTGCGCTTCCACGTCCTGGCGCAAAAGTGTCCTGGGTGCAGCTCCTACAAC
ACCAGGGAGACGAGGGGCGGCCCGGCTATAGCGGCGTGCTCCAGAGTCTGAGCGCCAGGAGGAGACGACAGTACAACATA
CACTACTCACTCATAGTCACAGCTGTGACGCTATCCAGGATCTGGTCAAGATGATGGGGGCATTAGAGCTAGCTTGTAGG
TTGAAGCTGCAGGTGCTTGCTGCAGTAGGAAGCACCGGAGAGTGACGCGTCTCCTCTGT-GAACAAGCCAGGAATTGCTT
GCTATCGCCGACAGGGAGGCTGCCGCGGCTGCTCATTGCAGTTCGGAGGACAACAAAACTCGCTGCGCTTGCATAAATCC
GAAGAAATGATTTAC--------------CGCTTGATCATCCCCTCTGATATGTATGAGTTGTTGTGTGGTACATGACCC
TGTCTAGGGAGCTCCTGTAAGGCTATGAAACAACTACACACCAGAAAGAAAACTTATTCTTCTTTCTGTTAGAACTCCAT
TGCTACTTCCATGTCTACAAGCACCAGATTGCGCCATGCACTGATGCACACCAAAACATGTTTCTGTGATCTGTCTGATA
ATCTGATTGCTTTGCATGAAGCAGAAATGTTTGTAACAGTATCGAACTTCAAAAAATAAATAGGGGCCAGTTTTCTAGAA
ATACACGGGCCAGCATAGTAGGCCTTGTTTTCACTGCCCATGCAAGGCCTAACTAACTATTTCTTCTACACTGGGCCACT
CA------------------------------------------------------------------------------
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------------------TGCATTATGTCCAAACGAGAGGAAAAGGCCATTTTTCAACGCGCAGATCGGATCGACGCCTA
TCTGATTTGCTGCGTCAGCCGTTCACTGCAACCCGCTCATTTGCAACTTGAGCTCTCTTTTTTTTTCCCAGGGGGAAATA
GTTTTATTTCAAAATGATAGGGTTACAGTCAAGAGGCAAGAGCTCCTCTATACATCGGGGTCCTCTGCGTAGTCATACAG
CAGTGCTACACTCAGTACGACTATATGTCACCAATCGATCTGCTACCCTATTTTGTTCCCTACGAAACTTCTGACGAATA
AACTCCCGGCTTCCCATAAGTGTTTGGATTTCAGCAACCAGATGACCATACGCTGAGCGAGCTAGG--------------
-
>chr1B_22
---------------------TAAAAGAGTTGACATGTGAGCGAATTTATGGTTATGTCCACTGCATCTCAAAGGGAAAT
TCCTTTCTTTAAAAGAAATCTTCTAGGGTAGAG-----------------------------------------------
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-------------------------------------TCTTCATTTTT--------------------------------
-------------------------------------------------CATTATACGGAGTAAGTATTGAAGTTGGGTT
CACGTCATGGAAAGAAGGTGGCGGCCATCCCATATGTTGGAAGTTGGAACACAAACAAAACTTCAAGTCGTGAATGCCAA
AAAACATGTTTGCAATATTCCTGCAGATTATAGGCCTATTAGTCTATGTAACGTTGTCTACAAAATTATTGCTAAATCCC
TTGCGAACAGGCTTAAACCACATCTCCCTGGCTATATTCATCCCTCTCAACAAGCATTTATTGAAGGAAGGAGAATTAGT
AACAATATAATCATAGCTCAAGAAATCACTCACTCCTTTGCACTCAAGTCTTGGAAAACTCCTGCTTTCATGCTTAAAAT
TGATCTTGCCAAAGCCTTTGATCGTCTAGAATGGAAATTCATTATTGGCGCTTTGGCACATAAAGGGCTACACAATCATT
TCATCAATCTCATTTATGCCTGCATTTCTACTCCAGTTTTTTCCGTTATCATAAATGGCCAAGAATATGCTAAATTCAAA
AGTAGCAGAGGCATAAGACAAGGTTGTCCACTCTCTCCATATCTCTTTGTCCTTGCAATTAATGAATTATCTGTCTCCTT
GCAGGAAGCTATGAAACATAACCATCTTTCAGGTATTTCCCTTAGACCAAACTGCCCCCCTATCCACTCTCTCATGTTTG
CGGATGATCTTCTTGTTTGTGGCCAAGCTACGCTCCAAGAAGCCACTATTATGAGTCAACTCATTCAATCTTTTTGTGCT
AGATCTAGCCAGATCCCAAATTGGAATAAATCTGGAATTCTATTTAGCAAAGGTGTAGACAGCAGCATTCAGCAAGCTAT
AAAAAACATCTTCCCTGTTGTTTCCATTGATAATAACTTCATTCATCTAGGGCATCCTCTCATTCTGCCAGCAAAAGATA
GATCCTCTGCCTATAATTTTATAGTTGATAAATTCAAAGCCAAACTCCCTACTTATAAGGCCACCAAACTCTCTCATGCC
GGTAGGCTCACTCTTATAAATTCCGTGTTTGCTTCCATCCCTATATATTACATGTCCAATATTCTTTTTCCCAAGAAGTT
CCTAGCCAAACTCACTTCAATTATTAAAAACTTCTGGTGGGCAGGAGTTAGAGAGGAAACTAATGAGAGATCTCTTTGCC
TCAGGGCTTGGAGAGACATTTGCTTCCCTAAGAATGAAGGAGGTTTAGGCATAAAAAACTTACAAGCCACCAACAAAAGC
CTAATCCTTGCAGCTGCCTGGAGGATAGCAGAAAATCCTAATAGCCATATCTCAAAAGTTTTGCAGTCTAAATATTTCCC
GGATCTTCCCTTTGGAGAGCTAACCCAAACATCCCCAAATCTTCCTTTTGGACTTCAATCATCAAAGTTAGGCCAATGCT
CATCAACAATTCTTTTTACCAGATTACAAAAGGCAATATTTCTCTTTGGAGCTCTCCTTGGTTCAACTCATGGGAAAATA
TTTATGATCATCTTGTTATCCAAAATAATGATTTTAAATACCCGGCACTAGTTAAAGATCTCTGGCTTCCTAATCACAAA
ATGTGGAATCACAATTTTATTGATATGCTATTTGACCAAGACACGGCTGTAATTATAAAGCAGGTTCCAATTATTCAAGC
TGAAGATGATGATATTTTGTGCTGGAAACTAACTCCAACAGGGAAATTCAACACAAAAAATGCATACAAACTTTGTCTAC
AGGTGATGAGGGAAGAGGGGGAGCCACAACCTAGAGCTCTAGCAGACAATACTAAGGAACTTCTAAAGCAAGTTTGGAAA
GCCAAAGATATTGCTCCAAGAATCCAAACTTTTGCCTGGAGACTAATTAGAAAAGCTCTGCCAACGAGGAAAAGAGCAAG
TAAACATTCTAAATATATCAGTACCCGTTGTGCTAGATGTGGGTTGGAAGAAGATGATATGCACATATTGTTTACTTGTC
CGTTTGCTAGAGCAGCCTGGTTTGCCAAACCTTGGTACATAAGATCTGATTTACTAATTCAAAATTCTGATTCTCTAGCT
TCCATTATTATGAGTTTTGCTAGTTCAGATCACCCTTATGCTACTTTAAGCAATAATTTTTACATTCATGTGGTGCTTAT
GGAAAGCAAGGAATGATATACTCTTCCAGAGAAAAGATGTGTCTCCTTTCCAGATCTTTTTTGTAGCACATGCTATCACA
AATAGCTTATCTTTAGAAGTAAGGACATTAAAACAGAGAAAGATAACCACTGAAAATCACATGATAAATTCTCAGGAGAA
AGAAAATCAGAGACAGGGAATTACGATTGATAGTATCATGCTTCCAGATTCAGTCAAAATTTACACAAATGCAGCCTGGC
ATGAACTAAGAAATTTTGACACTATTGAAAGTGTAAGAACAGGAATTGGTATTTTTTTGCAGGTACATCAGAGAGACCAA
AAGATGGAAGCTACAATCTCAGCGACTATTGAACACTCACAATCAACAATTCAAGCAGAGGCACATGGAATCAATCTAGC
GGCAATCATTATCAACATGCTAAATATTCAACAAGCAGCCATTTTAACGGACAATCTTACTCTTGCAAAAGCAGCAGCAA
CAAGATCTCCTAATTCTCAACCTGGACACTGGCAAATAAGGAGCATTCTGACAAACTTCTGTAATAACAATGCAACAAAA
CAGGTTCAGGTGTTTCATATTCCTAGAAGTCATAATTGTGAGGCTCATGTAGCAGCCAAGTTAACTCAGTCTCAGAATAT
ATTTCCTGAACAGAGTTTTAGGATAAGCTGTTGTAATGTTCAGCATAAAAAATGGCATTGCCCCCTAATTCAAATCATTG
CAGACATTGCTAATCAGGGATATGTCATTACCCATGTAAACTGCAGATAAATGAATGTATGTTAGGCGCCTTGTGCGCCT
TTCTCTTGTTCAAAAAAAAAAACTTCAAGTCGTGAATGAAATGAAAAAACAAAGAAGCTGGTCCAGGTCCAGCCCCCCTC
C-----GCCTATATATCCGGCCCGCGTCCCGCGCTTCTCCTCCAACACGCGCAGCACAGGCTACCCATTCTTTCTTATTA
ATTCCCGCCGGGCGCGTGCGCGTGCGCGTGAGCGGACGGACGGCAGCGAGCCTCTCCCGGACTCCGATTCCTTCCTCCTT
CCTTCCGGCGGAGCTGATCGCCTCTCCTTCTCCTCTCCC-------AGAGAGGAAACCCGGAGGAAGCAGAGACGGCCGG
ACAGATGGATTTGGGGGCAGAGCAGCACGGGTAAGCAAATCAAATCAAACCAACCAGCTTTTCGGTTCGAG---------
-----------------GCCACTGATTCGATGGTTTCCGGGTGAAGCTGCGAGCATTACACGAGGAGGTGCAGGATACGG
GCGCCCTGCTGTGGCGAGGTCTTCGGCTGCCGGCATTGCCATAACCAAGCTAAGGTCTGCATAGAGTGCCTTTTTCCTTT
CTCGCCAACGCCAAACGCCAACGCCATGCCGCGCGATTTCGCGGTCGGTCGGTCGGGCTGTGCTCTGAATTCGGACA---
---------TTTGGGCCTGTTTGTGTTGGTTGCTGCAGAATTCGCTGGAGGTGGACCTCCTCGACCGGCACGAGATCCCC
CGCCACGAAATCAGCAAGGTGTGTGCTCCTCCCTTAGCCCCATCTGTTACTTAATTCTATCTCGGTCATTCCGTGTTTTG
CTGTATGCCTTCGACCTTCTTTTTCTTCCTCCTCCTCCACTTGGGTACCGGCGGTAGAATTGCAATCCCACTTGCTCACT
CCCTTCCAATCCGATGGTTATGGCTGTGCACGCATGGACAGTTCCAAGGCACCAACTGCCATGCAGTGGCCAAGGGAGCC
CGGTCGCCCATCCCAAAGATCTTTTTTTCGCCCCGTTTCGTCAGATAACTGATAAGGTTTATC-----TTGGATGACCCG
CCGGGTCTTGATATTTCTGTTTTATATTCCGATTCTCGCCATCAAGATCGGCGCAAGTGGC----CGGCCGGCGTGGTCA
TCGACTCCACATGATTGTTAGGTAGGTCCATGCGGATGCGACGATGTGTCGGCGTCACCACAACGGAGGCGGCTCGGAGA
AAGGGGAAAGTGGAAGAAATGGAAAAGACAAAGGATACTTCGCTGTCAATCAAGATTAATTT-CGATTTAACGGCACTTC
ACTGATTGAGCTGGCGCATAATTGAAGGGCATGATTGCATCCGGTAGCCATGTAGCTAGCTAGCTCCACCATGTGTCCAT
GTCCACCACCTCTCTGGTCACATAATTATATTGAGCAATTATAGTGGACTTCTTATTCTCTCTTTTTTCTCTCAACG--G
AAAACACTAGTCAGTAGGAATCATATGAACTC-----------------------------------ACATAGTTACTAA
AGCTATTCTACTTTGTGATGTATCACAGGTTATCTGCTCTCTCTGCAACAAAGAACAGGATGTACGTGTAGTTCTACAGT
AACTTTCACCTTTTGACTGTACTAATTGCATGACATGACATGACATGAAAACTGCTCCGTTTGGATCAACAGGTGCAACA
GAACTGCTCCGGTTGTGGGGCATGCATGGGAAAATACTTCTGTGAAAAATGCAACTTCTTTGACGATGATGTACGTGTAA
TTCCACAGTC----------------ACTCTATTAAGCATTTTCATTTTCGATGTCTGACAGCTATGTTACC---TTGTT
ACAGATCTCAAAGAAGCAGTACCACTGCGATGGATGCGGCATCTGCAGGCAAGTGCCTAATTTACGGTC-----ATCCTT
CTTTTCGTCGAAACGTTTACTGATTTTCTCTTCCAGAATGATCAAATGTTGGATACATTGTTCTCCTTTTTCAGAACTGG
CGGCATGGACAATTTCTTCCACTGCGAAAAATGCGGTGCGTTGGGTGTGAAAGTTACTGCGTTGTAAGCTTTTCATGGCA
TGTCTCTCCATTAAAGATGGCTCTAATAGTAATCATGCCCTTGTTCACTGACAGGGTGTTGCTACAGCAATGTTTTGAAG
GACTCTCATCATTGTGTGGAACGAGCAATGCATCACAACTGCCCTGTCTGCTTCGAGGTGACGCTTTGCTGTAATCCATG
CCCTAAACACTCCTGATTTTGCAATTCTTGATTTGTAAAGACAACCATGCTTTTGAATCGCAGTATCTATTTGACTCGAC
CATGGACATCAGCGTACTGCACTGCGGGCACACGATCCATTTGGAATGCCTGAACGAGATGAGGGTTCATCACCAGTAAG
CATTTCTTCAGACAACTGTTTGTTCGCATGAAATGGACGAGAGGGTCTGATCTGATCAAGATGCTTGCTTGGTTGGTTGG
TTTGTTTTCCCCAGCTTCGCGTGCCCGGTCTGCTCACGGTCGGCCTGCGACATGACGGATGCATGGCAGAAGCTCGACCA
GGAGGTCGCCGCCACGCCCATGCCAGAGTTCTACCAGAAGAAGATGGTAAGCA---------------------------
---ACTTTAATAAGATGGCCGCATGCATCGTTCTGATGAAGAGGCCGGGGGTAATCCTTCTTTTCAAAAAAAGAAAAATA
TGTAACCATCTTGCCAATGCTGGAACCTGAACAAACAGTGATGTGTTTCTTCTTCTTCTTCTTCTTCCAGGTATGGATCC
TTTGCAACGACTGCGGGGCGACGTCGAGCGTGCGCTTCCATGTCCTGGCGCAAAAGTGTCCTGGGTGCAGCTCCTACAAC
ACCAGGGAGACGAGGGGCGGCCCGGCTACAGCGGCGTGCTCCAGAGTCTGAGCGCCTGGAGGAGACGACAGTACAACAGA
CACTACTCACTCATAGTCACAGCTGTGACACTATCCAGGATCTGGTCAAGATGATGGGGGCATTAGAGCTAGCTTGTAGG
TTGAAGCTGCTAGTGCTTGCTGCAGTAGGAAGCACAGGAGAGTGTCGCGTCTCCTCTGT-GAACAAGCCAGGAATTGCTT
GCCGTCGCCGACAGGGAGGCCGTCGCGATTGCTCATCGCAATTCGAAGAACAACGAAACTCGCTGCGCTTGCATAAATCC
GGAGGAATGATTTACCGCTTGTCATGGTGCGCTTGATCATCCCCTCTGATAGGTATGAGCTGTTGTGTGGTACATGAGCC
TGTCTAGAGAGCTCCTGTAAGGCTATGAAACAATTACACACCAGAAAGAAAACTTGTTCTTCTTTCTTTTAGAACTCCAT
TGCTACTTCGATGTCTACAAGCACCAGATTGCACCATGCACTGATGCACCCCAAAACATGCTTCTGTGATCTGTATGATT
TTCTCATTGC-TTGCATGAAGCAGAAATGTTTGTAACAGTATCGAACTTCAAAAAATAAATACGGGCCAGTATTCTAGAA
ATACACGGGCCAGCATAGTAGGCCTTGTTTTCACTGCCCATGCAAGGCCTAACTAACTATTTCTTCTACACTGGGCCACT
CCGAAATCACTAATTAAGGAGTACTCTTTGCGGAGATCACTCCAACTCCCCCAGGTTGCGACAAGTGGCGCGCTGCATGT
GTGCCATTTGTTGCAACCTGTGAGTTTTCCTTTTTTTCTAGATCCGTTTATTCAAAATGTTTTATCTCTTAAACCATGCG
TTCAAATCTCGAACCGCTTTCACTATTGGATTCCTCGCGTCGAGATCTTCAAAACTAGATCCCATGTTGATAGGTTTTGA
CGAACTTTTTTTTTCATGAAAAAACTGACGAAAAAACCGAACCGGGAACATGTTTTTTTTTCCTTTCCGAAGGAGGCACG
CCCGTGCCTCTCGCGGAAACAAAACAGTGCCTCTCGCGAACGAAAAATAAACAGAAAACACGTTTTTTTCATTTCCGAAA
GAGGCACGCCCGTGCCTCTCGTGAAAGCACAACCGTGCCTCTTGCGGAAGCAAAACCGTGCCTCTCGCGAAAGGAAAAAA
ACAGAAACACGTTTTTTTCCCTTTCCGAGAAAAGCACGCCCGTGCCTGTCGCGAAAGCACAACCGTGCATCTCGCGAAAG
CAAAACCGTGCCTCTCGCGGAAGAAAAAAACAAAAAACGTGTTTTTTCCTTTCCAAAAGAGGCACGCCCGTGCCTCTCGG
AAAAGCACAACGTGCCTCTCGTGGAAGCAAAACCGTGCCTCTGGCGAAAAAAACAGAAAACACGTTTTTTTCGTTTCCAA
GAGGCACAACCGTGCCTCTCGCGCAAAAAAAATATTTTTTTTCGAAAAAAAATCTTGGTCGAAAAGCTAGGGAAGACCGG
TAGAAAACCAAAACGTCAAAAAAACCGTTTAAAAAGCCGAAAACGCGTGCGTAAAAAAATCCAGAGGAAGCGCCCAGAGC
GCGATACGTGGCGAATGACTGTGAACGCGTCAAATGGCGCTGATCGTTGCGAAGCTCCCGAAGGAGCGCTCGTTAATTAG
TTGCTCCCGGGCCACTCGTGCATTATGTCCAAACGAGAGGAAAAGGCCATG-----------------------------
------TT------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>chr1D_149
--------------------------------------------------------------------------------
--------------------------------------------------------------------TAGTAACATAGA
-ATGTTACTAGTCTATGGTACTATCTCTATAGTGGGGAGTAACATATGTGTAGTAACATGCAACACTTCATTTATTAGGC
TATAGACTCATCTTGCCTTGAGATGTGTGATGTTACTCATACTACTAGTAAGACTACCCATAGTGGGAGTAACATAGGTA
GTAACATCACACATATCTAGATAAAATAGATGATGTGGCAAGCAAGAAATGAAGAAATGGAGGAAAGTGGTAACATAGCT
AGTTACTAGTAGTATGAGTAACATCACACATATCAAGGCAAAATGAGTCTATAGCATAATAAATGAAGTGTTGCATGTTA
CCACACATATGTTACTCCCCACTATAGAGGTAGTAACATAGACTAGTAACATGTGCATGTTACTAATCTATGTTACTACC
CATTGTGGCCAGTCTTATGTTACCACTTTCCTCTCTTTCTTCATTTATTGCTTGCCACATCATCTATTTTATCTAGATAC
GT--GTGATGTTACTACCTATGTTACTCCCACTATGGGTAGTCTA-----------------------------------
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----------------------------------------------------------------------AGCAGGCTAT
A-------------------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSS----------------------------------------------------------S
-----------SS-S---------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------SS-
S----------------S-S---S-----------------------S--S----------------------------S
-----------S---------S--------------------------------------S-------------------
------------------------------------------S--S-------S---SS--SSS----S--------S--
--------S----------------------------SS------S------SS----------------S-S-------
----------------S---------S--S--S----------------S---S-----------S-S------------
------SSSSSS-S-SS-S------------------------------------------------------------S
S-SS---------S--SS-------------S-S---S------S-----S-----SS--------S-------------
---S--------------------------------S----------------------------S--------------
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-------------------------------S--------------------------------------------S---
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------------------------------S-------------------------------------------------
-------------S--SSS--------------------SSSSSSS----------------------------------
------------S-------------------------------------------------------------------
---SS---------------------------------------------------------------------------
-----------------------------------------S------------------------SS---S---S----
----------------------S----------------------------S-------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------S---------------S---S---
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------S-----
--------------------------------------------------------------S-----------------
------------------------------------------S-----------------------------S-------
---------------------------------------------------------S----------------------
-----SS------------------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S-
-------------------------------------------------------------------S------------
--S-----------------------------------------------------------S-----------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
---------------------S-------------------------------S----------SSS-SSSSSS------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S-----------S------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------S--------------------------S-S----------------------S------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
---------S---------------------------------------------------------------------S
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
---------------------------------S-S--------------------------------------------
----------S--------------------------------S-------------SSS--------------------
---------------------S----------------------------------------S-----------------
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----S------------------S--------------------------------------------------------
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-------------------S------S-----------------------------------------------------
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------------------------------------------------------------------S-SS----S---S-
--------S------------------S-S---------------S---------S-----S-----S----S------S
--S--------------------------S------------------------------------S-------S-----
----S----S-------S-S--S--S------------S-----S-------------S-------SSSSSSSSSSSSSS
S
>forward_139
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---------------------------------------AACTGGCCACAATGGGTAGT---------------------
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>reverse_4212
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---------------------------------------------------CTCGGGCTGTGCTCTGAATT---------
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>forward_3933
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-------------------------------------------------------------------------CGGCCGG
ACAGATGGATTTT-------------------------------------------------------------------
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>reverse_4953
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------------------------------------------------------------------------TTGTCCAT
GTCCACCACCTC--------------------------------------------------------------------
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>forward_4923
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----------------------TGAAGGCCATGATTGCATCCT-------------------------------------
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>reverse_6698
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---------------------------------------------------------TGCGAACAAGCCAGGAATTG---
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-
