>input_sequence_32514
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------------------------------------------------------ATGGCAGCCGCCTCCGCCTCCGCCGG
AAACGCGGGCGAGCCGCGGCTCGTCGACCGCTGCATCGACGCAGCGGCGCGGTGCCGAGCCTCCGTGGAGGCCTGGCGCC
GCCAACGCCGGTCCCTCGAGCGCCTGCCCGGGCAGGTGGCCGACGCGCTCCTCAGCCGCCTCGCCGCTCGCCGCCTCCTT
TTCCCCTCCCTCCTCGAGTAAGCGCCCCGCCTTCTCCGCCCAGAACATGCCCGAT-TTTTTCTCTGTTTTCTCTACCATG
AGACGGTTCTGCGCTGTTCCGTTTCTGGATCTGTTGCTTCCTGCCGCGTGTGGATGAATCGTGCTTGTGTGCGCAGGGTT
TTCCAGCACTCGGTGCAGGAGGTCGACTTCAGCGGCAACATCGCCGTAGATGCGGAGTGGCTGGCTTACCTCGGCTCGTT
CCGGTACCTGGGCATCCTCAAGCTGGCGGACTGCAAGAAGGTCGACCACGCCGCGATCTGGCCGCTCTCCGGTACAGCTC
TCAAGCTTATTTCTATAATGATGAAACCATGATTTCCAGTACATAGTTTCGAAACATGACTTGGTTTGATTGAAGAAATT
AATTAATTGCCTTACTAGTTTTTAATAAAGTTGCTCTGATTATTCAGGCATGAGTATGCTAAAAGAATTGGACTTGTCGA
GATGCTCTAGGATAACTGATGCCGGCATCAAACATATAGTCTCCATTGATAGTCTGGAGAAGCTACACTTATCTGAGACT
GGATTGACTGACAATGGGGTGATGCTCATCTCAGCACTAAAAGGTTTAAATTTGCTAGATTTGGGAGGGATTCATATGAC
CGACAAAGCATTACGGTCATTACAGGTACATA--CTCATGATGCGCGACCATTTTTTTCC--ATTAAAGGATGCA-----
-------------------GTCTCATCTAGTAATGTTTATATTTTCTGATAGCATATATACATATCACTACGCCACTGCT
TGCTCATTTCTTTTTGAGTGACGCGTAATGGAGTATTAATTTATAGTTTTTACTGTTCCAGGTATTGACTCAACTTGAGC
ACCTTGATATATGGGGTAGTGAAATTACTGATGAGGGAGCTTCCGTCCTTAAGGCGTTTACAAGATTGAGGTTCTTAAAT
GTTTCTTGGACACATGTGACTCGTTTGCCACCCCTTCCAAACATGAAATATCTTAATATGAGCAACTGTACAATTTATTC
CATTCGTGGCGGTGATTCTGAAGTTCATATTCCTTTGCAAAAGTTTACGGCCTCTGCAGCCTCATTTGGTGACATTGATG
AGGTGTTCTCTAGCATCGTAGCAAGCTCATTTTCATTCTTGGACATGTCTGGTTGTTCTTTAAGCAACTTATATGGCCTG
CAAAAGATGAAAAGTCTAGAGCATTTGGACCTTAGCTTGAGCAGAGTAACTGATGATGCAATCGAGTATGTTGCAAATAT
TGGAATGAAGCTGAGATATCTAAGCCTCAAGAATACTGGAATAACCTCTCAGGCACCATGTATTTTGGCAGGAACAGTTC
CAAACCTGGCTTCACTGTCTTTAGCTTATACAAAAGTTGATGATTCTGCTCTAGTATATATCAGCATGATGCCTTCATTG
AGAGTGATAGATCTAAGTCATACAAGTATCAAAGGTTGCTTTTTTGCTTTGCATTTATTTCTTTTTCTTGATTAAATAAA
CACGCTTTCTCTTTGAGAAACTGAATTCTATCATATTACAGGGTTCACTCGTGCTGAAGCAAACTCAGAGAAAGTACTGT
CTCTGCCTCTACTTGAGCATCTCATATATCTTGAAAGTCTAAATCTGGAGGATACACCACTGTCAGATGAAGTTATACCT
C--CCA----TAG----CATCCTTTAGAGCACTAAAATATTTGTACCTGAAAAGTGATTTCTTG--TCTGACCCCGCATT
GCATGCCCTGTCTTCTGCCTCAAATTTGATACATCTTGGATTTTGTGGGAGTATAT-----TATCAAACTCTGGGCTTCT
GCAATTTGTGCCCCCTGCCCAGCT-ACATGTGTTGGATTTAAGTGGCTGCTGGGTCTTAACAGGGTATGCCATCTCAT--
---CATTTCGTAGC---CATCACCCGGTGATAGAGGTGAGACATGAACTAATTCAGGAACTTCAACCAAGCCACATCGGT
ACTTCACAAGTTCACAAGTCTAGGCATCTTCCACGGGCAAAAACTAAAGTTGTTAATAGCTCGGCTGATT----------
--CTAGCAGGCA---TTCTGGTATCTTCTTCGTAGGTAAGGGTGATGTAACTTCAATCTGCTTTA---------------
-------------TTCTCTTTCAGTTAGAAGGAATATAATCTGAGTGACCTATGTGCTTTATAACGTATGATAACAAATT
TGCCT----TTTGATT-----TAAACAGATCAAAGGATAAAATACAGCAGGGAGAAAATGCTGGAGAT-CCAAGATCTTA
CCCAATCGAATTCAGTGTTACATGATGTGCAGCTTCCACCAGAGCTGCGAAGGATGGAATGA------------------
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---
>chr3A_1_TraesCS3A01G373500
TTGAATTGACAACTTAGCTGCTAATACCTTCAAATGTTCTTTGGCCCCCCTTGTGTCGAATCTATAAATTTGGGTTGAAT
ACTCTACCCTCAATAACTGTTGTGATTCCCTATACTTGTGGGTTATCAATGGCAGACATGGTTTTCTTCTTCGGCGTCTT
AGTCATGGTGAGGTGCCAGATCTAGAGTTTGATGTCATGTCCCGGATGTTACCTCGGTCTGATTCGTTCAACGACAATGA
CTTCACTTTTGATGAGCCACCCTGGAGGTCCGCAAAGCTCCATATCAGCGATGTAACTGCGTCGAGCTCGAATGAGGGGG
TGATCCATCATTTTTCCCTTCGGTGGTTGTTGTGGTGGTGCCGGAGGCAGGTGACAAACGTTGGTGTCAAACTCAGAGGC
GTTTTACTGTCTTTTTTAATTTTGTCATGTTTGCCTTTACATGACTTATATTTTAATCTTTATGACATTAATGAGACTTG
TATTATTATGAAAAAAGGTTGAGAGTAGCGAACCAACCTGTGGTTGGATGGTTAGAGTGAGTGTGGTATCCCTAACCCAC
CAGAATTCAAATCATGGTGCTCGCATTTATTCCTGGATTTATTTTGAGATTTCCAGCGATGCGTATTTAGTGGGAGGAGA
CGTTCCGGCTCAGTTTTTTGAAGGTGCTCGTAGGGATAGGATGTGCGTGTGTGCCCTCATAGGGGTGAGTGTATGCACGT
GTATATGAGCGCTTGTGTTTGTACTGATGTTTGAAAAAACAGTTGACAGTAAATAGATAGGAGTAAATAATTACTTGAGA
CCAAGGAAATTAGAGAGTTATCTTAAAAAAAAAGAATTAAAGAATTGTCTTGAGAGCCAAGGAAGTACCGAGCTCTGCGA
TGGT--------------TAACAAATCCTACGCCGTGCCCAGCTCTGCGAGGTCCCCCAGATCCCATCATTTCGCCCCCT
CCCGTCAAGCGGCGGCTAGCACCGAAACGCCGGACTTGCCGTGCCGTCCAATCCATGGCAGCCGCCTCCGCCTCCGCCGG
AAACGCGGGCGAGCCGCGGCTCGTCGACCGCTGCATCGACGCAGCGGCGCGGTGCCGAGCCTCCGTGGAGGCCTGGCGCC
GCCAACGCCGGTCCCTCGAGCGCCTGCCCGGGCAGGTGGCCGACGCGCTCCTCAGCCGCCTCGCCGCTCGCCGCCTCCTT
TTCCCCTCCCTCCTCGAGTAAGCGCCCCGCCTTCTCCGCCCAGAACATGCCCGAT-TTTTTCTCTGTTTTCTCTACCATG
AGACGGTTCTGCGCTGTTCCGTTTCTGGATCTGTTGCTTCCTGCCGCGTGTGGATGAATCGTGCTTGTGTGCGCAGGGTT
TTCCAGCACTCGGTGCAGGAGGTCGACTTCAGCGGCAACATCGCCGTAGATGCGGAGTGGCTGGCTTACCTCGGCTCGTT
CCGGTACCTGGGCATCCTCAAGCTGGCGGACTGCAAGAAGGTCGACCACGCCGCGATCTGGCCGCTCTCCGGTACAGCTC
TCAAGCTTATTTCTATAATGATGAAACCATGATTTCCAGTACATAGTTTCGAAACATGACTTGGTTTGATTGAAGAAATT
AATTAATTGCCTTACTAGTTTTTAATAAAGTTGCTCTGATTATTCAGGCATGAGTATGCTAAAAGAATTGGACTTGTCGA
GATGCTCTAGGATAACTGATGCCGGCATCAAACATATAGTCTCCATTGATAGTCTGGAGAAGCTACACTTATCTGAGACT
GGATTGACTGACAATGGGGTGATGCTCATCTCAGCACTAAAAGGTTTAAATTTGCTAGATTTGGGAGGGATTCATATGAC
CGACAAAGCATTACGGTCATTACAGGTACATA--CTCATGATGCGCGACCATTTTTTTCC--ATTAAAGGATGCA-----
-------------------GTCTCATCTAGTAATGTTTATATTTTCTGATAGCATATATACATATCACTACGCCACTGCT
TGCTCATTTCTTTTTGAGTGACGCGTAATGGAGTATTAATTTATAGTTTTTACTGTTCCAGGTATTGACTCAACTTGAGC
ACCTTGATATATGGGGTAGTGAAATTACTGATGAGGGAGCTTCCGTCCTTAAGGCGTTTACAAGATTGAGGTTCTTAAAT
GTTTCTTGGACACATGTGACTCGTTTGCCACCCCTTCCAAACATGAAATATCTTAATATGAGCAACTGTACAATTTATTC
CATTCGTGGCGGTGATTCTGAAGTTCATATTCCTTTGCAAAAGTTTACGGCCTCTGCAGCCTCATTTGGTGACATTGATG
AGGTGTTCTCTAGCATCGTAGCAAGCTCATTTTCATTCTTGGACATGTCTGGTTGTTCTTTAAGCAACTTATATGGCCTG
CAAAAGATGAAAAGTCTAGAGCATTTGGACCTTAGCTTGAGCAGAGTAACTGATGATGCAATCGAGTATGTTGCAAATAT
TGGAATGAAGCTGAGATATCTAAGCCTCAAGAATACTGGAATAACCTCTCAGGCACCATGTATTTTGGCAGGAACAGTTC
CAAACCTGGCTTCACTGTCTTTAGCTTATACAAAAGTTGATGATTCTGCTCTAGTATATATCAGCATGATGCCTTCATTG
AGAGTGATAGATCTAAGTCATACAAGTATCAAAGGTTGCTTTTTTGCTTTGCATTTATTTCTTTTTCTTGATTAAATAAA
CACGCTTTCTCTTTGAGAAACTGAATTCTATCATATTACAGGGTTCACTCGTGCTGAAGCAAACTCAGAGAAAGTACTGT
CTCTGCCTCTACTTGAGCATCTCATATATCTTGAAAGTCTAAATCTGGAGGATACACCACTGTCAGATGAAGTTATACCT
C--CCA----TAG----CATCCTTTAGAGCACTAAAATATTTGTACCTGAAAAGTGATTTCTTG--TCTGACCCCGCATT
GCATGCCCTGTCTTCTGCCTCAAATTTGATACATCTTGGATTTTGTGGGAGTATAT-----TATCAAACTCTGGGCTTCT
GCAATTTGTGCCCCCTGCCCAGCT-ACATGTGTTGGATTTAAGTGGCTGCTGGGTCTTAACAGGGTATGCCATCTCAT--
---CATTTCGTAGC---CATCACCCGGTGATAGAGGTGAGACATGAACTAATTCAGGAACTTCAACCAAGCCACATCGGT
ACTTCACAAGTTCACAAGTCTAGGCATCTTCCACGGGCAAAAACTAAAGTTGTTAATAGCTCGGCTGATT----------
--CTAGCAGGCA---TTCTGGTATCTTCTTCGTAGGTAAGGGTGATGTAACTTCAATCTGCTTTA---------------
-------------TTCTCTTTCAGTTAGAAGGAATATAATCTGAGTGACCTATGTGCTTTATAACGTATGATAACAAATT
TGCCT----TTTGATT-----TAAACAGATCAAAGGATAAAATACAGCAGGGAGAAAATGCTGGAGAT-CCAAGATCTTA
CCCAATCGAATTCAGTGTTACATGATGTGCAGCTTCCACCAGAGCTGCGAAGGATGGAATGAGACAAGTTCTGGTTTACT
TTTGTCACGCACTTCAGTTTCGTCATTTGATTAAATAGTGCATCTATTTTCTTGGGGGATGTCGCAATTTTGAATTAGCT
AAAGACAGTTTGTCATTTGATTAAATAGTGCTTCTCTCACTGTATACTGCCAACTGTCTGA--GTTGTAACATGAAGAAT
----TTGTTT-G--TATGATTTATATGCCTTTGTGATCCTGAAGTATGTATTCAGTCAGTTCATCTGTTTTAACAGAGGG
CATTTGTGTTATGTTGT-CAGATGTGA--CCATGGGTTCAAATGGTTGATGCTTCCTGATGTAGGATGATTTTTGTCGTA
AACAAGTGTATGTATTTGCCATTTGATCATGATCAGTCTTATTACCCATGAGCAATACATGGTAAACGAAGGAGAGTCCA
TGAGGTGCAGCATTTTCCATGTAAACATTGTTC-----------CT-----------AAATGGATCATATTGTTCCTTCC
TGGGTGGAAAATAACCAAGTTCATTCTCCCTGCTGGGAATT-AATAGACGTATTTGTTCTTCTAACCAGCTAT-------
GGACTTCTGGAAGTTGCAAGTAT-TGCACAAAAA-GATAAGAAACAAGCTGCTGGTGAAA-TTGAATTGTTCATATAACT
ATACACAG-CTA----------------TAACTGTATGATAAACTAATTGTAGTACAGAAACAATTCCCATAAAAAAAAC
TATACAAAAACAATTATAGAAATCTGCAA---------------------------------------------------
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-------------------ACACACGGAGATTCTTAAAGATCCTTGTTGGTTTTGTTGGGTGATGTACTGTAATTTTTGT
TGGGTGATGTACTGTAAACAAACCAAATGCCACAGCAATCTTCTCGCTGTGCTGAAGCAGACACT---CCTTGAGCTCAT
CTGACATGTAATGGAGCACAATGCTTGTGTCTAGTACATAGTCAATGTCTTTAATTTCTCTGATCAACCAACT----ATT
GCATAGATCTCTTGTGCTTGTGGATGGCCGGTGTCACCAGCTCCGAACTCGACAATGAT--TTCCAACATCCATCCAACT
CAA
>chr3B_780
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-----------------------------------------------------------GGAATACATGATTACTTGAGG
CCAACG-AATTAGAGAGTTACCTTGAAAAAATAGGAATTACAAAG---CTTGAGAGCCAAGGAAGTACTACTACATGATT
AATACAAACATCTACTAGTAACAAATCCTACGCCGTGCGGAGCTCTGCGAGGACCCCCAGATCCCATCATTTCGCCCCCT
CCCGTCAAGCGGCGGCTCGCACCGAAGCGCCTGACTTGCCGTGCCGTCCAACCCATGGCAGCCGCCTCCGCCTCCGCCGG
AAACGCGGGCGAGCCGCGGCTCGTCGACCGCTGCATCGACGCAGCGGCGCGGTGCCGAGCATCCGTGGAGGCCTGGCGCC
GCCAACGCCGGTCCCTCGAGCGCCTGCCCGGGCAGCTGGCCGACGCGCTCCTCAGCCGCCTCGCCGCTCGCCGCCTCCTT
TCCCCCTCCCTCCTCGAGTAAGCGCCCCGCCTTCTCCACCCAGA-CATGCCCGATC-TTTTCTTTGTTTTCTCTACCATG
AGT-GGTTTTGCGCTGTTCCGTTTCTGGATCTGTTGCTTCCTGCCGCGTGCGGATGAATCGTGCTTGTGTGCGCAGGGTT
TTCCAGCACTCGGTGCAGGAGATCGACTTCAGCGGCAACATCGCCGTAGATGCGGAGTGGCTGGCTTACCTCGGCTCCTT
CCGTTACCTGGGCATCCTCAAGCTGGCGGACTGCAAGAAGGTCGACCACTCCGCGATCTGGGCACTGTCCGGTACAACTC
GCGAGTCTATTTCTATAAT---GAAACCATGATTTCCAGTACATAGTTTCGAAACATGACTTAGTTTGATTGAAGAAATT
AATT----GCCTTACTAAAAC-----AAAATTGCTCTGATGATTCAGGCATGAGTATGCTAAAAGAATTGGACCTGTCGA
GATGCTCTAGGATAACTGATGCCGGCATCAAACATATAGTCTCCATTGATAGTCTGGAGAAGCTACACTTATCTGAGACT
GGATTGACTGACAATGGAGTGATGCTCATTTCAGCACTAAAAGGTTTAAATTTGCTAGATTTGGGAGGAATTCATATGAC
CGACAAAGCGTTGCGGTCATTACAGGTACATACTCTCATGATGTGCGACCATTTTTC-CCCCATTAACGGATGCAGAGAG
ATTCTCCTATGCTAACCTTGTCTCATCTTGTAATCTTTATATTTTCTGATAGCATATTTACATATCAGTATGCCACTGCT
TGCTCATTTCTTTTTGAATGACGCGTAATGGAGTATTAATTTATAGTTGTTACTGTTCCAGGTATTGACACAACTTGAGC
ACCTTGATATATGGGGTAGTGAAATTACTGATGAGGGAGCTTCAATCCTTAAGGCGTTTACAAGATTGAGGTTCTTAAAT
GTTTCTTGGACACATGTGACTCGTCTACCACCTCTTCCAAACATGAAATATCTTAATATGAGCAACTGTACAATTTATTC
CATTCGTGGCGGTGATTCTGAAGTTCATATTCCTCTGCAAAAGTTTACGGCCTCTGCAGCCTCAATTGTTGACGTTGATG
AAGTGTTCTCTAGCATCGTAGCAAGCTCATTTTCATTCTTGGATATGTCTGGTTGTTCTTTAAGCAACTTATATGGCCTG
CAAAAGATGAAAAGTCTAGAGCATTTGGACCTTAGCTTGAGCAGAGTAACTGACGATGCAATCGAGTATGTTGCAAATAT
TGGAATGAAGCTGAGATATCTAAGCCTCAAGAATACTGGAATAACCTCTCAGGCACCATGTATTTTGGCAGGAACAGTTC
CAAACCTGGCTTCACTGTCTTTAGCTTATACAAAAGTTGATGATTCTGCTCTAGTATATATCAGCATGATGCCTTCATTG
AGAGTGATAGATCTAAGTCATACAAGTATCAAAGGTTGCTTTTTTGCTTTGCATTTATTTCTTTTTCTTGATTAAATAAA
CATGCTTTCTCTTTGAGAAACTGAATTCTATCATATGACAGGGTTCACTTGTGTTGAAGCAAACTCAGAGAAAATACTGT
CTCTGCCTCTACTTGAGCATCTCATATATCTTGAAAGTCTAAATCTGGAGGATGCACCACTGTCAGATGAAGTTATACCT
C--CCA----TGG----CATCCTTTAGAGCACTAAAATATTTGTACCTGAAAAGTGATTTCTTG--TCTGATCCCGCATT
GCATGCCCTGTCTTCTGCCTCAAATTTGATACATCTTGGATTTTGTGGGAGTGTAT-----TATCAAACTCTGGGCTTCT
GCAATTTGTGCCCCCTGCCCAACT-ACATGTGTTGGATTTAAGTGGCTGCTGGGTCTTAACAGAGTATGCCATCTCAT--
---CATTTCGTAGC---CATCACCCGATGATAGAGTTGAGACATGAACTAATTCAGGAACTTCAACCAAGCCACATCGGT
ACTTCACAAGTTCGCAAGTCTAGGCATCTTCCACGGGCAAAAACAAAAGTTTTTAATAGCTCGGCTGATT----------
--CTAGCAGGCA---TTCTGGTATCTTCTTCATGGGTAAGGGTGATGTAACTTCAATCTGCTTTA---------------
-------------TTCTCTTTCAGTTAGAAGGAATATAATCCGAGTGAGCTATGTGCTTTATAACATATGATAACAAATT
TGCCT----TTTGATT-----TAAACAGATCAAAGGATAAAATACAGCAGGGAGAAAATGCTGGAGAT-CCAAGATCTTA
CCCAATCGAATTCAGTGTTACATGATGTGCAGCTTCCACCAGAGCTGCGACGGATGGAATGAGACAAGTTCTGGTTTGCT
TTTCTCATGCACTTCAGTCTCGTCATTTGATTGAATAGTGCATCTATTTTCTCGGGGGACATCGCAATTTTGAATTAGCT
AAAGACAGCTCGTCATTTGATTAAATAGTGCTTCTCTCACTGTATACTGCCAACTGTCTGA--GTTGTAACATGAAGAAT
----TTGCTT-G--TATGATTTATATGCCTTTGTGATCCTGAAGTATGTATTCAGTCATTTCATTTGTTTTAACAGAGGG
CATTTGTGTTATGTTGTTCAGATGTGA--CCATGGGTTCAAATGGTTGATGCTTCCTGATGTAGGATGATTTTTGTCTTA
AA---------GTATTTGCCATTTGATCATGATCAGTCTTATTACCCATGAGCAATACATGGTAAACGAAGGAGAGTCCA
TGAGGTGCAGCATTTTCCATGTAAACATTGTTC-----------CT-----------ATGTCGATCATTTTGTTCCTTCC
TGGGTGGAAAATAAC----------------------AATT-AATGGACGTATTTGTTCTTCTAACCAGCTAC-------
GGACTTCCGGAAGTTGC-----------------------GAAACAAGCTGCTGGTGAAA-TCGAATTGTTCATATAACT
ATACACAG-CTATAACTGTACGATAAACTAACT-------------------GTACAGAAACAATTCCCATAAAAAAA-C
TATACAGAAACAATTATAGAAATTTGCAA---------------------------------------------------
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-------------------ACACACGGAGATTCTTAAAGATCCTTGTTGGTTTTGTTGGGTGATGTACT-----------
-------------GTAATCAAACC-AATGCCACAGCAATCTTCTCGCTGTGCTGAAGCAGACACT---CCTTGAGCTCAT
CTGACATGTAATGGAGCACAATGCTTGTGTCTGGTACATAGTCAATGTCTTTAATTTCTCTAATCAGCCAACT----ATT
GCGTAGATCTCTTGTGCTTGCGTATGGCCGGTGTCACCAGCTCGGAACTCGAGAATGGT--TTCCAAC------------
---
>chr3D_885
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------------------TAACAAATCCTACGCCGTGCGGAGCTCTGCGAGGACCCCCAGATCCCCTCATTTCGCCCCCT
CCCGTCAAGCGGCGGCTCGCACCGAAACGCCGGACTTGCCGTGCCGTCCAACCCATGGCAGCCGCCTCCGCCGGAGGA--
----GCGGGCGAGCCGCGGCTCGTCGACCGCTGCATCGACGCAGCGGCGCGGTGCCGAGCCTCCGTGGAGGCCTGGCGCC
GCCAACGCCGGTCCCTCGAGCGCCTGCCCGGGCAGCTGGCCGACGCGCTCCTCAGCCGCCTCGCTGCTCGCCGCCTCCTT
TTCCCCTCCCTCCTCGAGTAAGCGCCCCGCCTTCTCCACCCAGA-CATGCCCGATCTTTTTCTTTGTTTTCTCTACCATG
AGACGGTTTTGCGCTGCTCCGTTTCTGGATCTGTTGCTTCCTGCCGCGTGCGGATGAATCGTGCTTGTGTGCGCAGGGTT
TTCCAGCACTCGGTGCAGGAGATCGACTTCAGCGGCAACATCGCCGTAGATGCGGAGTGGCTGGCTTACCTCGGCTCCTT
CCGGTACCTGGGCATCCTCAAGCTGGCGGACTGCAAGAAGGTCGACCACTCCGCGATCTGGGCACTGTCCGGTACAACTC
TCAAGCTTATTTCTATAATGATGAGACCATGATTTCCAGTACATAGTTTCGAAACATGACTTGGTTTGATTGAAGAAATT
AATT----GCCTTACTAGTTC-TAATAAAATTGCTCTGATGATTCAGGCATGAGTATGCTAAAAGAATTGGACTTGTCGA
GATGCTCTAGGATAACTGATGCCGGCATCAAACATATAGTTTCCATTGATAGTCTGGAGAAGCTACACTTATCTGAGACT
GGATTGACTGACAATGGGGTGATGCTCATCTCAGCACTAAAAAGATTAAATTTGCTAGATTTGGGAGGAATTCATATGAC
CGACAAAGCATTAAGGTCATTACAGGTACATA--CTCATGATTTGCGACCATTTTTTTCCCCATTAACTGGTGCAGAGAG
ATTCTCTTCTGCTAACCTTGTCTCATCTAGTAATGTTTATATTTTCTGATAGCATA--TACATATCAGTATGCCACTGCT
TGCTCATTTCTTTTTGAGTGGCGCGTAATGGAGTATTAATTTATAGTTGTTACTGTTCCAGGTATTGACACAACTTGAGC
ACCTTGATATATGGGGTAGTGAAATTACTGATGAGGGAGCTTCTGTCCTTAAGGCGTTTACAAGATTGAGGTTCTTAAAT
GTTTCTTGGACACATGTGACTCGTTTGCCACCTCTTCCAAACATGAAATATCTTAATATGAGCAACTGTACAATTTATTC
CATTCGCGGTGGTGATTCTGAAGTTCATATTCCTCTGCAAAAGTTTACGGCCTCTGCAGCCTCATTTGGTGACATTGATG
AGGTGTTCTCTAGCATCGTAGCAAGCTCATTTTCATTCTTGGACATGTCTGGTTGTTCTTTAAGCAACTTATATGGCCTG
CAAAAGATGAAAAGTCTAGAGCATTTGGACCTTAGCTTGAGCAGAGTAACTGATGGTGCAATCGAGTATGTTGCAAATAT
TGGAACGAAGCTGAGATATCTAAGCCTCAAGAATACTGGAATAACCTCTCAGGCACCATGTATTTTGGCAGGAACCGTTC
CAAACCTGGCTTCACTGTCTTTAGCTTATACAAAAGTTGATGATTCTGCTCTAGTATATATCAGCATGATGCCTTCATTG
AAAGTGATAGATCTAAGTCATACAAGTATCAAAGGTTGCTTTTTTGCTTTGCATTTATTTCTTTTTCTTGATTAAATAAA
CATGCTTTCTCTTGGAGAAACTGAATCCTATCATATGACAGGTTTCACTCGTGTTGAAGCAAACTCCGAGAAAATACTGT
CTCTGCCTCTACTTGAGCATCTCATTTATCTTGAAAGTCTAAGTCTGGAGGATGCACCACTGTCAGATGAAGTTATACCT
C--CCA----TGG----CATCCTTTAGAGCACTAAAATATTTGTACCTGAAAAGTGATTTCTTG--TCTGATCCCGCATT
GCAGGCCCTGTCTTCTGCCTCAAATTTGATACATCTTGGATTTTGTGGGAGTGTAT-----TATCAAACTCTGGGCTTCT
GCAATTTGTGCCCCCTGCCCAACT-ACATGTGTTGGATTTGAGTGGCTGCTGGGTCTTAACAGAGTATGCCATCTCAT--
---CATTTCGTAGC---CATCACCCGGTGATAGAGGTGAGACATGAACTAATTCAGGAACTTCAACCAAGCCACATTGGT
ACTTCACAAGTTCGCAAGTCTAGGCATCTTCCACGGGGAAAAACAAATTTTTTTAATAGCTCGGCTGATT----------
--CTAGCAGGCA---TTCTGGTATCTTCTTTGTAGGTAAGGGTGATGTAACTTCAATCTGCTTTA---------------
-------------TTCTCTTTCAGTTAGAAGGAATATAATCCGAGTGAGCTATGTGC---ATAATATATGATAACAAATT
TGCCT----TTTGATT-----TGAACAGATCAAAGGATAAAATACAGCAGGGAGAAAATGCTGGAGAT-CCAAGATCTTA
CCCAATCGAATTCAGTGTTACATGATGTGCAGCTTCCACCAGAGCTGCGAAGGATGGAATGAGACAAGTTCTGGTTTACT
TTTCTCGCGCACTTCAGTCTCATCATTTGATTAAATAGTGCATCTATTTTCTTGGGGGACATCGCAATTTTGAATTAGCT
AAAGACAGCCCGTCATTTGATTAAATAGTGCTTCTCTCACTGTATACTGCCAACTGTCTGA--GTTGTAACATGAAGAAT
----TTGCTT-G--TATGATTTATATGCCTTTGTGATCCTGAAGTATGTATTCAGTCAGTTCATCTGTTTTAACAGAGGG
CATTTGTGTTATATTGT-CAAATGTGA--CCATGGGTTCAAATGGTTGATGCTTCTTGATGTAGGATGATTTTTGTCTTA
AACG------------------------------AGTCTTATTA--------------------------------TCCA
TGAGGTGCAGCATTTTCCATGTAAACATTGTTC-----------CT-----------AAATGGATCATTTTGTTACTTCC
TGGGTGGAAAATAACCAAGTTCATTCCCCCTGCTGGGAATT-AATGGACGTATTTGTTCTTCTAACCAACTAC-------
GGACTTCTGGAAGTTGCAAGTAT-TGCACAAAAAAGATAAGAAACAAGCAGCTGGTGAAA-TTGAATTGTTCATATAACT
ATACACAG-CTA----------------TAACT-------------------GTACAGAAACAATTCCCATAAAAAAAAC
TA------------------------------------------------------------------------------
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-----------------------------ATTCTTAAAGATCCTTGTTGGTTTTGTTGGGTGATGTACTA----------
-------------GTAATCAAACCAAATGCCACAGCAATCTTCTCGCTGTGCTGAAGCAGACACT---CCTTGAGCTCAT
CTGACATGTAATGGAGCACAATGCTTGTGTCTGGTACATAGTCAATGTCTTTAATTTCTCTGATCAACCAACT----TTT
GCATAGATCTCTTGTGCTTGCGGATGGCCGGTGTCACCAGCTCCGAACTCGAGAATGGT--TTCCAACATCCATCCAACT
CAA
>chr3D_2746
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--------------------------------------------------------------------AGAAAATAATGT
CTATGCCTCCACTTCAGCATCTCATCTATCTTGTAAGTCTAAATCTGGAGGACGCACCACTGTCAGATGAAGTCGTACCT
C--CCC----TGGCTGGCATCCTTTAGAGCACTAAAACATTTGTACCTGAAAGGTGATTTTTTTTTTCTGATCCTGCATT
GCACA--------TCCCCCTCAAATTTGACACATCTCGGTTTTTGTCGGAATGTACTACAGTATCAAAGTCTGGGCTTCT
GCAATTTGTGCCCCCTGCCCAGCTAACATGTGTTGGGTTTAAATGGTGGCTGGATCTTAACAGGAGATGCCATCTCAA--
---CATTTCATAGGCATCATCACCTGGTGATAGAGGTGAGACAT--ACTAATGCAGGAACTTCAACCAAATCGTGGTGGT
ACTTCACAAGTTTACAAGTCTAGTAAACTTCTATAGGCAAAAACACAAGCTGTTAATAGCTTGGCTGACT----------
--CTAGCAGG----------------------------------CTGTAATGTCACTCTGCTTTATTCTCTTTTTTTTTG
ACGCGTTGCTTTATTCTCTTTCAGTTAGAAGGAATATAATCTCAGTGAGCTATGTG--TTTTAACGTATGACAGTAAGTT
TGCCT----TTTTGATTTAAATAAATAGATGAAAGGATAAAATGCAGCAGGGATGAATCGATGGAGATCCCAAGACCTTA
ACCAATCGAATTACGTGTTACATGGTTTGCGGCTTCCACCAGAACTGCGGAGGATGGAACGAGACAAGTTCTGGTTTACT
TTTCTCATG-----------------------------------------------------------------------
---------------------------------------------------------------------ATCTGAAGAAT
TAGCTTGTAC-G--TATGATCTATATACTCTTGTGATCCTGAAGTATGTATCCAGCCAGCTTGTCTGTTTTAACAGAAGG
CTTTTGTGTTATGTTG-TCAGATGTGA--CCATGGGTTCAAATGTTTGATGCTTTCGGATCTAGGATGATTTTTGTCTTC
GACATCTGTGTGTATTTGCCA-TTTGATCACCCTCAACCTT------ACGAGCAGCACATGGTAACCAAAGGAGAGTCCA
TGTGGTGCAGCATTTTCCATATAAACACTGTTCATCAATGTGGACT-----------AAATGGATCATTTTGTTCCTTCC
TGGGTGGAAAATAACCAAGTTCATTCCCCCTCCTGGGAATTAAATGGATGTATTTGTTCTTCCAACCAGCTA--------
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---
>chr5D_2773
AGCATTCAACTAGTATCT--------------------------------------------------------------
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------------------------------TTGTAAGTCTAAATCTAGAGGATGCACCACTGTCAGATGAAGCTATACCT
CGCCCTTGGCTGG----CATCCTCTCGAGCAGTCAAATATCAATACCTAAAAAGTGATTTCTTG--TCTGACCCCGCATT
GCATGTCCCGTGTTCCGCCTCAAATTTGACACATCTTGTTTTTTGTGGGATTTGTGC-----------------------
----------CCCCCTGCCCAGCT-ACATGTGTTGGATTTAAGTGGCTGCTGGATCTTAACAGGAGATGCCATCTCAA--
---CATTTCGTAGG---CATCACCTGGTGATAGAGGTGAGACATGAACTAATGCAGGAACTTGAACCAAATCGTGGTGGT
ACTTCACAAGTTGACAAGTCTAGGAAACTTCCATGGGCAAAACCAAAAGCTGTTAATGGCTTGTCTGACTGACTCTAGCA
GCCTAGCAGGCATCCTTCTAGTATCTTCTTCGT-GGTAAGGATGCTGTGACTTCACACTGCTTTA---------------
-------------TTCTCTTTCAGTCAGAAGGAGTATAATCTCAGTGAGCTAAGT------------------------T
TGCCTTTTGTTTGATT-----TAAATAGATGAAAGGATAAAATACAGCAGGGACGAATTGATGGAGATCCAAGAC-----
----------TTCAGTGTTACATGGTGTGTGGCTTCCACCAGAACTGCGAAGGATGGAACGAGACAAGTTATGGTTTACT
TTTCTCGTGCACTTCAGCCTGGGCATTTGATTAGGTAGTGCAGCTATTTTGA----------------------------
---------------------------------CTCTCACTGCATACTGCAAACTGCCTGACAGTGGTGATATGAAGAAT
TAGCTTGTACAG--TATGATCCATATACTCTTGTGATACTGAAGTATGTATTCAGTCAGCTTGTCTGTTTTAACAGAAGG
CTTTTGTATTATGTTG-TCAGATGTGA--CCATGGGTTCAAACGGTTGATGCTTCCTGATCTAGGATGATTTTTGTCTTC
ACCATGTGTATGTATTTGCCATTTTGATCACCCTCAACCTT------ATGAGCAGCACATGGTAACCCAAGGAGAGTCCA
TGAGATGCAGCATTTTCCATGTAAACATTGTTC-----------CTGGATGTGTACTAAATGGGTCAATTTGTTCCTTCC
TGGGTGGAAAACAACTAAGTTCACTCCCCCTACTGGGAATTAAATGGATGTATTTATTCTTCTAACCAGCTAGCAGCTAA
GGACTTCCGGAAGTAATCCAAGTATGCCCCAAAA-GATAAGAAACATGCTGCTAGTCAAGTTTGTATTGTTCATGTAACT
GTACATACTCTATAACTTTATGGTAGACTGACT-------------------ATACAGAAACAACATCTAATCCTTTGCA
AAATCAATGGTTTAGAAAAGCTAAAAAAATGAACATCAGTCAGTATTTACCAGCAAAAAGGCCACGCTGAGCAAGAAATC
TCTAGGGTTTCTTAAGCAAAAAACCAAACCGGCTCATCAATCGCCATTCACAGCTCACCAGTACTCCCTGCATGAGCATT
TCCCATCTTTCATCCTATGGAACCTGTTGCTATCTCTCAATATTACCTCCCTTCCAGTGGATTTAGAGATATACTTGATT
GCAGAATGGCAATCTGCGCACACACGGAGATTCTTAAAGATCCTTATTGGTTTTGTTGGCGATG----TA----------
-------------GTAATCAAACCAAATGCCACAGCAATCTTCTCGCTGTGCTGGAGCAGACACTCCTCCTTGAGCTCAT
CCGACATGTCATGGAGCACGATGCTTGTGTCTGGTACGTAGCCAATGTCTTTAATTTCTCTGATCAACGCAGACAACTTT
GCATAGATCTCTTGTGCTTGCGGATGGCCGGTGTCACCAGCTCTGAACTCGTGAATTGTGTTTCCAACATGCATCCAACT
CAA
>chr5A_2792
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----------------------------------AAGTCTAGTTCTGGAGGATGCACCACTGTCAGATGAAGCTATACCT
C--CCTTGGCTGG----CATCCTCTAGAGCAGTAACATATCTGTACCTAAAAAGTGATTTCTTG--TCTGACCCCGCATT
GCATGTCCCGTGTTCCGCCTCAAATTTGACACATCTTGTTTTTTGTGGG-------------------------------
---ATTTGTGCCCCCTGCCCAGCT-ACATGTGTTGGATTTAAGTGGCTGCTGGATCTTAACAGGAGATGCCATCTCAATT
TAACATTTCATAGG---CATCACCTTGTGACAGGGGTGAGACATGAACTAATGCAGGAACTTCAACCAAATCGTGGTGGT
ACTTCA--------CAAGTCTACGATACTTCCATGGGCAAAAACAAAAGCTGTAAATGGTTTGTCTGACTGACT------
--CTAGCAGGCATCCTTCTAGTATCTTCTTCGTAGGTAAGGATGATGTGACTTCACTCTGCTTTA---------------
-------------TTTTCTTCCAGTCAGAAGGAGTATAATCTCAGTGAGCTAAGT------------------------T
TGCCT----TTTGATT-----TAAATAGATGAAAGGATAAGATACAGCAGGGACGAATTAATGGAGATCCAAGAC-----
----------TTCAGCGTTACATGGTGTGCGGCTTCCACCAGAACTGCGAAGGATGGAATGAAACAAGTTCTGGTTTACT
TTTCTCGTGCACTTCAGTCTGGGCATTTGATTAAATAGTGCAGCTATTTTGAC---------------------------
--------------------------------TCTCTCACTGCACACTGCAAACTGCCTGACAGTTGTGATATGAAGAAT
TAGCTTGTACAGTATATGATCCATATACTCTTGTGATACTGAAGTATGTATTCAGTCAGCTTGTCTGTTTTAACAGAAGG
CTTTTGTATTATGTTG-TCAGATGTGAGTCCATGGGTTCAAACGGTTGATGCTTCCAGATCTAGGATGATTTTGGTCTTC
ACCATGTGTATGTATTTGCCATTTTGATCACCCTCAACCTT------ATGAGCAGCACATGGTAACCCAAGGAGAGTCCA
TGAGGTGCAGCATTTTCCATGTAAACATTGTTC-----------CTGGATGTGGACTAAATGGATCATTTTGTTCCTTCC
TGAGTGGAAAACAACTAAGTTCATTCCCCCTACTGGGAATTAAATGGATGTATTTATTCTTTTAACCAGCTATCAGCTAA
GGACTTCCAGAAGTAATCCAAGTATGCCCAAAAA-GATAAGAAACATGCTGCTAGTCAAGTTTGTATTGTTCATATAACT
GTACATACTCTATAACTTCACGATAGACTAACT-------------------ATACAGAATCAACATCTAATCCTTTGCA
AAATCAATGGTTTAGAAAAGCTAAAAAAATGAACATCAGTCAGTATTTACCAGCAAAAAGGCCATGCTGAGCAAGAAACC
TCTAGAGTTTCTTAAGCAAAAAACCAAACCTGCTCATCAACCGCCATTCACAGCTCACCAGTACTCCCCGCATGAGCATT
TCCCATCTTTCATCCTATGGAACCTGTTGCTATCTCTCAATATTACCTCCCTTCCAGTCGATTTAGAGATATACTTGATT
GCAGAATGGCAATCTGCGCACACACGGAGATTCTTAAAGATCCTTATTGGTTTTGTTGGCGATG----TA----------
-------------GTAATCAAACCAAATGCCACAGCAATCTTCTCGCTGTGCTGGAGCAGACACTCCTCCTTGAGCTCAT
CCGACATGTCATGGAACACGATGCTTGTGTCTGGTACGTAGCCAATGTCTTTAATTTCTCTGATCAGCACAGCCAACTTT
GCATAGATCTCTTGTGCTTGCGGATGGCCGGTGTCACCAGCTCTGAACTCGTGAATGGTATTTCCAACATGCATCCAACT
CAA
>SNPs
SSS-S-SS--S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--S--S----------S
----S-S-------------S---S------S--S-S-S-SS--SSSS--------------------SSSSSSS--SSS
SSSS----------------------------------SS------------S---------------------------
-----------------S---------------------------------S----------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
-------------------------------------S------S------------------S----------------
--------S-----------------------------------------S-----------------------------
---------------------S-------------------------------------------------------S--
-------------------------------------------------S-----------S-S--S---------S---
--------------------------------------------------------------------------------
----SSSS------------SS-------S----------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
-------------------------------------------S-----------------------S------------
---------------------------------------------------------S---------S--S---------
------------------------------------------------S--------------------S----------
-------------------------------------------S------------------------------------
--------------------------------S-----------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S---------------------------------S----------------S-------------------S------
-----------------------------------------------------S--------------------------
-----------S--------------------------------------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S--------------S----------------------------------------SS-------------------
--------S-S---------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
----S---------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------S------------------S----------------------------------
--------------------------------------------------------------------------------
---------------------------------SSSSSSSSSSSSSSSSSSS----------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------SSSSSSSSSSS
SSSSSSSSSSSSS----S--------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------S-------------------------------S----S----------------------
---
>forward_882
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--------------------------------------------------------------AAGTACCGAGCTCTGCGA
TG------------------------------------------------------------------------------
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---
>reverse_2757
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------------------------------------TACAGGGTTCACTCGTGCTG------------------------
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---
>forward_2193
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-------------ATGTGACTCGTTTGCCACCC-----------------------------------------------
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---
>reverse_3604
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---GTCACGCACTTCAGTTTCGT---------------------------------------------------------
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---
