>input_sequence_32500
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-------------------------------------ATGTGGTGTGCAACGTATATTCACTGCAGTAGGCCCACGCGAC
AGA-AGGCCCAGGCTCGAGCGCCCAGAACCAA-TCCGCCATGCCTCATCAGAA--AAAATAAACGCACCAATCCCCTCAG
CGCAG----AGCACGCCACCGCCTTGATCTACCTCTCCCGGCCATCTCCGGCGACGCCGACGGGATCCTGTCGGCTCACC
CTACCCATTTCCCCAACTCACCTGGTCCACCGTCGCCGCCGCCAAATCCCCCACACT----CTCCCGTCCTCTTCTCCCG
GGATGCAAGCAGCTGCGAGGAGGGGCGTGGCGGCGGCGGCCGCCGCGTCGGCGTCGGCG---TCCTTCCACTCCACCGCC
GCGGCGCTCTCCAAATCCACGGTGCGCCCACCCTGACTAACCCCATCCATCTCTTCCTCC-CACTTTCCTTTTGTCTGAT
GAC---GAATCAATTCGATCCACGCATCCCGTTCAGTTCTTGCCTCCTGAT-TCGAAATCCCATTAGGAT---TGCTAGA
TAGGATTGCCT----------CCTGTAAAAGAGGAATATTTACTGCGCAGGATCATCCTCACAGTCAGCTTAGGGTGTA-
--TAGTTTGT-------AGCAATGGAAGCAC----TATTGCGCTGTGCATTTTTTTCAGATCCACTTACACATTTCAGGT
CTAGCTCAGTTTCTTAATTTCCGTAATCCCCCGGGCACTACATAGTACGTACT---------------------------
TGCTAAGTACAGTAGCATCTGGCGCGTATTCAGT-----TATTTGTG----ATGCGAGCTTGACGACGGTCCTGTAATTA
TTCTTGTGCAGCCTCGTATCCGGTTCAACGTCCGGGAAAAGCGCACCGACGCGAAGAATGCCCTCAAGAACGTTCTACTT
AACGGCGGTCCCTCCCAGGTATCTGTAACCATTTTCCTTTGAAAAAAAGAAAA---TTACTTCCTGAATTATGAGCTCGT
ATGCGAATGACAGCGCCATACTGATTTATCTACCTGGGG-----------AAAAAAATATAACATCCAATCTTATATAC-
-CAAACTATGAGGGTCTCTTTAACTGTGATGACTGGTGACATGTTAGTTCATTGTTTCACCGAGCGAACGGGAAAATCAG
ATGCGCGACAATGCCTAGAAAACTCAAAGTCATCGCTTCTTTTGTTTAATTTCTTTGAAAGCGTTGCCTTCCTTGTAAAA
AACAATAGTAATGGATTAGACTTTGAAACTGGTCTGAAAATTGTCAACAGGAAAGATGTAATAAGCAAACGAGGCAGCAG
AAAGCTGGTGGCAAATCGAAAGTCCGCTCCGGTCCTGGAAGTAATCCGTATAGCAAAGGCAGAGGTAGGTTTACTCTCGA
GCC---CTTTACCTTCCAATTGCTTGTTTTCACTGAAGACCAGTTTGCATCTTCTGTTTCCTAAAAGCATGT-GAAAATC
ACAAATATGAGCCTGCCACTAAACTTCTTGAAGTGTCCATTGGTAGTGTGTGACAGATTGGACCATTGGTACTGTCCATT
GGTCTCTTCTGAAATTCATTTTTCAACTCTTAGCCAGATTGTGATTTTCTGCGGTATGTTTGACTTGCTAAGGC-CATCC
TGTCATAAGCTTCAATTTGTAGTATCATACTCCCTCTGTACCACAATACTTGTCGCTGGGGGAAACCGGTACAAGTTCCC
CCAGCAAAGTTTCCCCCAGCGACAAGTATTGTGGTACAGAGAGAGTAGCATTTACTTTGATGCACATGA---ACTATTTA
ATATTCCTAATCCTAGCATGTTCAGTCTGTAACTCTTTTTGGACCATAACTTATATA--CCTTTAAATGTGTACACACCA
TTTGCTTTACGACCGTTTTCAGTATATTTGGTGGACGATAACAAGTGCACCATGATGTTTTCTATAGGTGGGATAGACTG
GAGGAACTTTGATGGTGATGATTCTAGTGATAGCCCTTACGGGAGCTTTGGCGGCAAGACATCTTTTACGTGGTACTGGC
CCGGGGAGGAGGATGATGATGACCTTCCTAATGGGTTCCAATGGAGGGAGGAGCCTCGACCGAACAAATCAAGGGAAAAA
GTTTGGAACGAGAGTGATGTGGATGAGGAAGAGGCCCCTCGTCGTGACGATCTAAAAAGCCATAGAATATCCCTTGGCTT
GCCAGTTTTGGGTCCCTTAAAGCTTGATCATATCAAGTCCGCGTAAGTCTTTGAGCATCTACATAGCATTTGCAAGAATT
CTGGTAATCGGGCTCCTGATTGTCTTTTCTTTCTCGGTGTTATGTT--TGCAGTTTTCGCGCGTCAGCTCTCAAGTGGCA
CCCGGACAAGCACCAAGGATCTTCACAGGTCAGTAGTGGCTTTCTTTG----CAACCTCTGGCGCACTGGGTGCGAATGC
TGAGCTAGAACCTGTGTAGGGGTGTTGATTCTCAAAAAAAGTGTGCATTTTT-CAGGCTGAAGCAGAGGATAAGTTCAGG
CGCTGCGTCGAAGCTTACAACGCCTTGTCTGGTGCTTTCAAACGGAGTAGCTAA--------------------------
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>chr1A_1_TraesCS1A01G020600
GTGCTTGCCTGTCTGGTCCTGATTAAATGGGCAAAATTTCATGCGACAGCTCATATTCATGCACATTACAATTCGGGAAC
AAAACCCACGCACGAAATGAAGGCTTTCGCGGAGCTATGTGACAGCAAAACAATGCTATGGCCCGCCCAAGCTTGGTGAA
AACCAGCAAGGAGTGAGAGTAAAATTGACCTATGGAAATAAAAATCTCGGGACTTCTTTAGAATGCCCCGCCCAGATCTT
AAATTGTAGCTTCGCCATTGCTCCGAGAGCTTAGGCACTCTCAGACGCCGGATACGCTTCTTCATGCATTTTGGGCCGTC
TGATTTCACTTTCGGATGAGATCATCCGTTAACCAAAACACTGTATCAAGGGCACTTTTGTGGCCTTCCAATGTTATCGA
T-------------------------------------------------------------------------------
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-----------------------------------------GTGGCCACAAGGGGGCCTGGTGTATGCCTTCCGCGGTGA
AATTATCATGCCACCGTCTGATATTTTCCTATGCCGCCGAGGTAAAAACTGAGATTTC-CATGGATGGCCATGTGCATGT
CAGCTGGATGTTGGCTCGGCGGTGGATGATGTGAGGGAGAACCCATGAT-------------------------------
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---------------------------------------------------------------------GTTTCCCCCAA
TCAATTTCTTTCTCTCTTTCTAGCCTT---------CTCTCTTCCTTGTCTTCCCTGCACCGCAGCCCAGCGGGATCTAG
GGCCAGCTCTCACATCATATCCTCAAGCTTCCCCTTCCCCTAGGCTCCAGCAGCCGGACTCTCTCCTCTCTACGCCATCC
GGTCTACCGCCCAAACAAAGAGAAGAAAAAAC-------CCTCGCGTCCCGATCCTCGCCTAGCCCGGGGCAAGACGCCC
AACGGAACTTGATCAGAGAAGCGGAGGAGGAGAAGAGATGTTCTCGACGTCGCCGGAGGCATCCAGCGAGAGGGAGATAG
CCCTAACTCGAGGGAATCCCTGTTTCTCGGGGGTTGAGCTATGTTGTGGAGAAGAATTAGGAAAAAAAAATCTTTGCATG
TTTTTTAGGGGTATAATATAAAGAAAAAAATCTTTGCATGTGGTGTGCAACGTATATTCACTGCAGTAGGCCCACGCGAC
AGA-AGGCCCAGGCTCGAGCGCCCAGAACCAA-TCCGCCATGCCTCATCAGAA--AAAATAAACGCACCAATCCCCTCAG
CGCAG----AGCACGCCACCGCCTTGATCTACCTCTCCCGGCCATCTCCGGCGACGCCGACGGGATCCTGTCGGCTCACC
CTACCCATTTCCCCAACTCACCTGGTCCACCGTCGCCGCCGCCAAATCCCCCACACT----CTCCCGTCCTCTTCTCCCG
GGATGCAAGCAGCTGCGAGGAGGGGCGTGGCGGCGGCGGCCGCCGCGTCGGCGTCGGCG---TCCTTCCACTCCACCGCC
GCGGCGCTCTCCAAATCCACGGTGCGCCCACCCTGACTAACCCCATCCATCTCTTCCTCC-CACTTTCCTTTTGTCTGAT
GAC---GAATCAATTCGATCCACGCATCCCGTTCAGTTCTTGCCTCCTGAT-TCGAAATCCCATTAGGAT---TGCTAGA
TAGGATTGCCT----------CCTGTAAAAGAGGAATATTTACTGCGCAGGATCATCCTCACAGTCAGCTTAGGGTGTA-
--TAGTTTGT-------AGCAATGGAAGCAC----TATTGCGCTGTGCATTTTTTTCAGATCCACTTACACATTTCAGGT
CTAGCTCAGTTTCTTAATTTCCGTAATCCCCCGGGCACTACATAGTACGTACT---------------------------
TGCTAAGTACAGTAGCATCTGGCGCGTATTCAGT-----TATTTGTG----ATGCGAGCTTGACGACGGTCCTGTAATTA
TTCTTGTGCAGCCTCGTATCCGGTTCAACGTCCGGGAAAAGCGCACCGACGCGAAGAATGCCCTCAAGAACGTTCTACTT
AACGGCGGTCCCTCCCAGGTATCTGTAACCATTTTCCTTTGAAAAAAAGAAAA---TTACTTCCTGAATTATGAGCTCGT
ATGCGAATGACAGCGCCATACTGATTTATCTACCTGGGG-----------AAAAAAATATAACATCCAATCTTATATAC-
-CAAACTATGAGGGTCTCTTTAACTGTGATGACTGGTGACATGTTAGTTCATTGTTTCACCGAGCGAACGGGAAAATCAG
ATGCGCGACAATGCCTAGAAAACTCAAAGTCATCGCTTCTTTTGTTTAATTTCTTTGAAAGCGTTGCCTTCCTTGTAAAA
AACAATAGTAATGGATTAGACTTTGAAACTGGTCTGAAAATTGTCAACAGGAAAGATGTAATAAGCAAACGAGGCAGCAG
AAAGCTGGTGGCAAATCGAAAGTCCGCTCCGGTCCTGGAAGTAATCCGTATAGCAAAGGCAGAGGTAGGTTTACTCTCGA
GCC---CTTTACCTTCCAATTGCTTGTTTTCACTGAAGACCAGTTTGCATCTTCTGTTTCCTAAAAGCATGT-GAAAATC
ACAAATATGAGCCTGCCACTAAACTTCTTGAAGTGTCCATTGGTAGTGTGTGACAGATTGGACCATTGGTACTGTCCATT
GGTCTCTTCTGAAATTCATTTTTCAACTCTTAGCCAGATTGTGATTTTCTGCGGTATGTTTGACTTGCTAAGGC-CATCC
TGTCATAAGCTTCAATTTGTAGTATCATACTCCCTCTGTACCACAATACTTGTCGCTGGGGGAAACCGGTACAAGTTCCC
CCAGCAAAGTTTCCCCCAGCGACAAGTATTGTGGTACAGAGAGAGTAGCATTTACTTTGATGCACATGA---ACTATTTA
ATATTCCTAATCCTAGCATGTTCAGTCTGTAACTCTTTTTGGACCATAACTTATATA--CCTTTAAATGTGTACACACCA
TTTGCTTTACGACCGTTTTCAGTATATTTGGTGGACGATAACAAGTGCACCATGATGTTTTCTATAGGTGGGATAGACTG
GAGGAACTTTGATGGTGATGATTCTAGTGATAGCCCTTACGGGAGCTTTGGCGGCAAGACATCTTTTACGTGGTACTGGC
CCGGGGAGGAGGATGATGATGACCTTCCTAATGGGTTCCAATGGAGGGAGGAGCCTCGACCGAACAAATCAAGGGAAAAA
GTTTGGAACGAGAGTGATGTGGATGAGGAAGAGGCCCCTCGTCGTGACGATCTAAAAAGCCATAGAATATCCCTTGGCTT
GCCAGTTTTGGGTCCCTTAAAGCTTGATCATATCAAGTCCGCGTAAGTCTTTGAGCATCTACATAGCATTTGCAAGAATT
CTGGTAATCGGGCTCCTGATTGTCTTTTCTTTCTCGGTGTTATGTT--TGCAGTTTTCGCGCGTCAGCTCTCAAGTGGCA
CCCGGACAAGCACCAAGGATCTTCACAGGTCAGTAGTGGCTTTCTTTG----CAACCTCTGGCGCACTGGGTGCGAATGC
TGAGCTAGAACCTGTGTAGGGGTGTTGATTCTCAAAAAAAGTGTGCATTTTT-CAGGCTGAAGCAGAGGATAAGTTCAGG
CGCTGCGTCGAAGCTTACAACGCCTTGTCTGGTGCTTTCAAACGGAGTAGCTAAGTAGCCGCCGGTCTGGTTCTTGACAA
GCATGCAGGAATAAAGGGGAATTTTCCTTTCCGGGAACTAGGCAGCGTCGATGAAACTAGGGTTTCAAAACCAACGGAAC
AAGTATTTGGTGCTCAGATTCATCAGGGGTTTGAAGATGAGCCCCTAGCAGAAGAATAGGAAATGAGATAAACGCACACA
TAGTGGAGGGTTTGTTGCTTTGAACTAG---------------------------------------GGAGCATTCATGT
AATATATACAAAATTTGAACCAGAACTCAAATCATTTCAAAGCATCAGCTAATGCATGATG-------------------
-----------------------------TTCCTAATAAAGGCAATGTTTTTC-GTCCATAACATGTAATTCTTTGATGA
AGTACATTTGTAATGCACATGTCCTGCTTTTGGCTTACTATTCAAATACTCCATCCATCCCTAAATATAAGTCTTTTTAG
AGATTCCAATATAAACTACATACGGAGCAAA-----TGAATGTAGACTCTAGAATATGTCTACATACATCTTTATGTAGT
CTATATTGAAATCTCTAAAAAAGACTTATATTTAGGTACAGAGGGAGTAATATTTGCTTTTCACTTTGTCCATAGCA---
------------------TCAGGCAGCTGAACCTGAACATCAAAGTAATTGAAG--------------------------
---------------CACTTTCAGATTAAAGGCCTTATGAACCAGTGATGAACGGTTGATAATCACATGGAAAATGGTCC
ATGGATGACCACTGTATAACACTTTGAGATCTTTAAAAAAATCCATAATTTACCATGATTCTTCCCTTAAGAGCAATAAT
AATAAGATAAAAAAATACATAGCAAAAACCATGAGCTATTACAGACAACTCCAACAACAAATCAAGCCAACCCAAGTTTG
ACAACTGATCTCACAAACACAC--TGACAATACACAAACATAGATATAGTGT------ACTTGCACTTGCACCATGGAGC
CGCCACGTATATAGGTGGCATATCCCAAGAGTACTCACGTCACGTCTGGAAAAAAA-CATAGCTTGCAAATACGCAATAC
ATTTCTAGAAGAATGAAC
>chr1D_289
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------------------------------------------------CGGATGCGCCTCTTGATACGTTTTCGGCCGTC
GGATCTGACTCCCGGATGAGATCAGCCGTTAACCAAAACACTGTATCAAGGGCAC-TTTGTGGCCTTCCGGTGTTAGAGC
ATCTCTAGCAGATCCCGCAAACCGGACCACGAGATAGAGCCCGTAAATCCGGCTAGAATAGATCCCTCAAAGTCGTCCGC
CCTGAATTTTTTTTATGGGATCTCGAATCCGCGAGCCCATTTCCTCTATAGCTACGGGATTTCGTCCTCTTTTTACACTA
TCCTCTATTTTTGACGGGAGGGAAATTTCAGCCCCAACCGCTTCCCTTGGAGCCGGCGCCACGGCCTTCCGAGCTCGATT
CCAGCTGAATAGAGAAGCCCGCATCTCGCCGCCGTTGCTGGTGCCCCGCCATGCCCTGGGAATCGACCGTCGGTGCCCCC
GCGAGCTGCCACCGCCTCCGAGCTGCTGCTGTCGTCGCCCACGAGCTCCCTACCCGTTGCCCCCGCGAACTGCGCCTCCG
CCGCCGCTAGCACATCCCTCAGCCGCGCAGGAGCTCCTCCACGCCGCAAGGTGCACCCAATTGTAATTTAGAATTTGTTT
CCAGGGTGTTTTGTGCTTTTTTGCATGGACATGATTGTATATTTAACTACTGTCTAATGGACTCCACATCTGACATGATT
ATTTTTACGGAATCTGTTCTGCCAGAACAATTGTCATACTGTAAAAACGTTTTATGGGATCTTGCAAACCGATTTTACGG
CACGAGATTTTAAGGCATCTGCTAGAGACACTCTTAGCGGCGTGGCCACAA----------TGTATGCCTTCCGCGGTGA
AATTATCATGCCATCGTT--------------------GAGGGAAAAACTAAGATTTCGCATGGAGGACCGTGTGCGTGT
C-------TGTTGGCTCGGTTGTGGATGAGGTGAGGGAGAACCCATAGGTAATGGTGTCCTGGACTAGGGGGTCCCGGCC
TAGCTGGCCTATTCCATGGGCCGAACTAACGGCCCGTTGATGAGTACGGACTCCGGAGGCCTCTACATGTGCATATCGAG
CTTCACCGAGGACTTGGTGTGTACTCCAAGAAGGTCTATTAGATTCGGTATGTAACCCCTAGATGGCAACTGACTATGTG
TGACCCTAGATACCATTGGTGCCTATATAAGCCGGGGGGTTTAGTCCGTAGAGGAGGCCATTCAGACATTCATCATTATC
GCCATTGCCCCTAGGATTTAGACCATAACTTACGATCTCGAGGTAAATCAATCTTGTACTTTGATACACTCATAATATAA
GCAAGAGAATGACATAGGATTTTACCTCCTTAGAGAGGGCCCAAATTTGGATAAAAGCTTCGTGTCTCCTATCTCTTGTT
ACCCATTGATATGATCATATAGCTCGGGCCCCCTACCCGAGATCTGCTGGTTTTGATACCGACAATAGGGTTTTCCCCAA
TCAGCTTCCTTCTCTCTTCCTAGCCCGCTCTCTCTGCTCTCTTCCTTGGCTCCCCCGCGCCGCCGCCCAGCGAGATCTAG
GGCCAGCTCTCGCATCATATCCTCAAGCTTCCCCTTCCCCTTGGCTCCAGCAGCCAAATGCTCTCCTCTGTACGCCATCC
AAACTACCGCCCAAACATGGGGAGCAAAAACCCTCACAGCCTCGCGTCCCGATCCTCGCCTAGCCCGGGGCAAGACGCCC
AGCAGAACCCGATCAGAGAAGCGGAGAAGGAGTAGAGATGTTCTTAACGTCACCGGAGGCATCGGGCGAGAGGAACATAA
CCCTAACTCGAGGGAACCCCTTTTTCTTGGGGGGTTGAGC----TGTGGAGAAGAATGA---------------------
-------------------AAAAAAAAAAAACTTTGCATGTGGTGTGCAACGTATA--CACTGCAGCAGGCCCACGCGAC
AGAAAGGCCCAGGCTCGAGCGCCCAGAACCAA-TCCGTCATGCCTA---AGAG--AAAAAAAACGAACCAATCCCCTCAG
TGCAGACAGAGCACGCCGACGCCTTGATCTACCTCTCCCGGCCATCTCCGGCGACGCCGACGGGATCCTCTCGGCTCACT
CTACCCATTCCCCTAGCTCACCTAGTCCACCGTCGCCGCCGCCAAATCCCCCACACTCCCGCTCCCATCCTCTTCTCCCG
GGATGCAAGCAGCTGCGCGGAGGGGCGCGGCGGCAGCG------GCGGCGGCGGCGGCG---TCCTTCCACTCCACCGCC
GCGGCGCTCTCCAAATCCACGGTGCGCCCACCCTGACTAACCCCATGCGTCTCTTTCCCCGCTCTTTCTTTTTGTCTGAT
GATGATGAATCAGTTCGATCCACGCATCCAGTTCAGTTCTTGCTTCTTGCTGTCGAAATCCCATTAGGAT---TACTAGT
TAGGCCAGCAGAGCTGGCTAGCCTGTAAAAGAGGAATATTTACTGCGCAGGATCATCAGCACAGTCAGCTTAGGGCGTA-
--TAGTTTCTACGCTTCAGCAATGGAAGCTCTATTTATTGTGCTGTGCATTTTTCAGGCCTGC---TACAAATTTGAGGC
CTGCCTCAATTTCGAAATGAAATTGGGGGATCCTTTAATTTCCTAGAAAAAATTTAG----TGCCTGAGCACTTGCCAAG
TACGGCGTCT-----------GCGCGTATTCAGT-----TATTTGGGTGGTATGTGAGCTTGACGATGGTTCTGTACTTA
TTCTTGCGCAGCCCCGTATTCGGTTCAATGTCCGAGAAAAGCGCACCGACGCGAAGAATGCCCTTAAGAACATTCTGCTT
AATGGCGGTCCCTCCCAGGTATCTTTAACCATTTCCTTTGATTTTTTTTTTTTTG---ACTTCCTGGTTTATGAGCTTGT
ATGCGAATGCCAGCACCATACTGATTTATCTACCTGTGAAGATTATAAAAAAAATATTACAACATCAAATCTTATATACA
CCAAACTGTGCGGGTCTCTTTTAATTGTA--ACTGGTGACATATT-GTTCATTGTTTCACCAAGCGAATGGGGAAATCAG
ATGCGCGACAATGCATAGAAAACTCCAAGTGGTCGCTTCATTTGTTTAATTTCTTGGAAAGCATTGCCTTCTTTGAAAA-
AAATTA---AATGGATTAGACTTTGAAACTGGTCTGAAAATTGTCAACAGGAAAGAAGTAGTAAACAAACGAGGCAGCAG
AAAGCTGGTGGCAAATCGAAAGTACGCTCCGGTCCTGGAAGTAATCCGTATAGCAAAGGCAGAGGCAAGTTTACTCTCAA
ACC---CTTTACCTTCCAATTGCTTCTTTTCACTCAAGATCAGTTTGTATCTTCTGATTCCCAAAAGCATGTGGAAATGC
GCAAATATGAACCTACCGCTAAACCTCTTGAAGAGTCCATTGGTATTCTGTGACAGATTGGACCATTGGTATCTTCTGAG
------------AATTCATTTTTCAACTCTTAGCCAGATTGTGATTTTCTGCGGTGTGTTTGACTTGCTAAGGTTCATCC
TGTTATAAGCTTCAGTTTGTAGTATCA-----------------------------------------------------
---------------------------------------------TAGCATTTACTTTGATGCATATGA---ACTATTTA
ATAT------TCCTAGCATGTTCAGTCTGTAACTCTTTTTGGACCATAGCT--TATA--CCTTCAAATGCGTAAACACCA
TTTACTTTAGGACCATTTTCAGTATATTTGGAGGACAATAACAAGTGCACCATGACGTTTTGTATAGGTGGGATAGACTG
GAGGAACTTTGATGGTGATGATTCCAGCGATAGCCCTTACGGGAGTGTTGGCGGCAAGACATCTTTTACGTGGTACTGGC
CCGGGGAGGAGGATGATGATGACCTTCCTAATGGGTTCCAATGGAGGGAGGAGCCTCGACCGAACAAATCAAGGGAAAAA
GTTTGGAACGAGAGCGATGTGGATGAGGAAGAGGCCCCTCGTCGTGACGATATGAAAAGCCACAGAATATCCCTTGGCTT
GCCTGCCTTGGGCCCCTTAAAGCTTGATCATATTAAGTCCGCGTAAGTCTTTGAGCATCTCCATAGCATTTGCAACAATT
CTGATAATTAGGCTCCCGATTGATTTTTCTTTCTTGGTGTTATGTTTCTGCAGTTTTCGCGCGTCGGCTCTCAAGTGGCA
CCCGGACAAGCACCAAGGATCTTCACAGGTCAGCATTGGTTTGTCTTTGCAACAACCTCTGGCACACTGGG-GCGAATGC
TGAGCTAGAACCTGTGTAGGGGTGTTGATTCTCAACAAAAGTGTGTA-TTTTTCAGGCTGAAGCAGAGGATAAGTTCAGG
CGCTGTGTCGAAGCGTACAACGCCTTGTCTGGTGCTTTCAAACGGAGTAGCTAAGTAGCCGCCGGTCTGGTTCTTGACAA
GCATGCAGGAATAA-GTTGAATTTTCCTTTCCGGGGTCTAGGCAGCGTCGATGAAACTAGGGTTTCAAAACCAACTGAAC
AAGTATTTGGTGCTCATATTCATCAGGAGCCTGAAGATGAGCCCCCAGCAGT---------------------GCACACA
TAGTGGAGGGTTTGTTGCTTTGAACTAGTAGGA------------------------------------AGCATTCATGT
AATATATACAAATTTTGAACGAGAACTCAAATTATTTCAAGGTGTCAGCAAATGCACAATG-------------------
-----------------------------TTCCTAATAAAGACAATTTTTTTCTGTCCGTAACATGTAATTCTTTGATGA
AATACATTTGTAATGCACATGTCCTGCTTTTGGCTTACTATTCAAATACTCCCTCTGTTCCTAAATACAAGTCTTTTTAG
AGATTCCATTATGAACTATATACGGAGCAAAATGAGTGAATGTACACTCTAGAACATGTCCATATACATCTGTATGTAGC
CTGTATTGAAATCTCTAAAAAAAGAC-ATATTTAGGAACAGAGGGAGTAATATTTGCTTTTCACTTTGTCCGTAACA---
------------------TCAGGCAGCTGAACCTGAACATCAAAGTAACTGAAG--------------------------
---------------CACTTTCAGATTAAAGGCCTTATGAACCAGTGATGAACAGTTGATAATCACATGGAAAATGGTCC
ATGGATGACCACTGTATAACGCTTTGAGAGC-TTAAAAAAATCCATAATTTACCATGATTCTCCCCTTAGAGC----AAT
AATAAGATATAAAAATACATAGCAAAAACCATGAGCTATTACAGACAACTCCAACAACAAATCAAGCCAACCCAAGTTTG
ACAACTGATCTCACAAACACACTGTGACAATGCACAAACATAGATATAGTGT------ACTTGCACTTGCACCATGGAGC
CGCCACGTATATAGGTGGCATATCCCGAGAGTACTCACGTCACGTCTGGAAAAAAAACATAGCTTGCAAATACGCAATAC
ATTTCTAGAAGAATGAAC
>chr1B_1031
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-------------------------------------------------------------------AGGCCCACGCGAT
AGAAAGGCC--------AGCGCCCAGAACCAAATCCGCCATGCCTCGTCAGAAAAAAAAAAACCGAACCAATCCCCTCAG
TGCAGA----GCACGCCGATGCCTTGATCTACCTCTCCCGGCCATCTCCGGCGACGCCGACGGGATCCTCTCAGCTCACT
CTACCCATTCCCTGAC----------CCACCGCCGCCGCCGCCAAATCCCCCACAC-----------TCCTCTTCTCCCG
GGATGCAAGCAGCTGCGCGGAAGGGCGCGGCGGCGGCG------GCGGCCGCCGCCGCCTCCTCCTTCCACTCCACCGCG
GCGGCGCTCTCCAAATCCACGGTGCGCACACCCTGACTTTCCCCATTCGTCTCTTCCTCT-CTCTTTCTTTTTGTCTGAT
GATGATGAATCAGTTGGATCCACGCATCCAGTTCAGTTCTTGCTC-------TCGAAATCCCATTAGGATGATTGCTAGA
TAGGCCAGCAGAGCTGGCTAGCCTGTAAAAGAGGAATATTTACTGCGCAGGATCATCATCACAGTCAGCTTAGCAGGGTG
ATTAGTTTGCACGCTCCAGCAATGGAAGCTCTGC----TGTGCTCCACATTTCTCAGGTCCAC---TGCGCATTTCAGGT
CCAACTCAATTTCGTAATGAAATTGGGGGATCCTTTATTTTCCCTGAAAAGTTGAGTGCACTGCCTGAGGTCTTGCCAAA
TGCCAAGTACAGTAGCATATG-CGCGTATTCAATAAAACTATTTGGG----ATGTGAGCTTGACCATGGTTCTGTAATTG
TTCTTGCGCAGCCTCGTATCCGGTTCAACGTCCGAGAGAAGCGCACCGACGCCAAGAATGCTCTTAAGAACATTCTGCTT
AACGGCGGTCCCTCCCAGGTATCCGTAACCATTCCCTTTGATTTTTTTAATTTATTTTGCTTCCTGGTTTATGAGCTTGT
ATGCGAAAGAGAGCGCCGTACTGATTTACCTACCTGGGAAGATTATAAAAAC---ATTACAACATCAAATCTTATATAC-
-CAAACTCTGAGGTTCTCTTTAACTG---TGACTGGTGACATGTT-GTTCATTGTTTCACCAAGCGAATGGGAAAACCTG
ATGCGCGACAATGCCTAGAAAACTCCAAGTGGTCGCTTCTTTTGTTTAATTTCTTTGAAAGCATTGCCCTCCTTGTAAA-
AACAATAGTAATGGATTAGACTTTGAAACTGGTCTGAAAATTGTCAACAGGAAAGAAGTAATAAACAAACGAGGCAGCAG
AAATCTGGTGGCAAATCAAAAGTCCGCTCCGGTCCTGGAAGTAATCCGTATAGCAAAGGCAGAGGTAAGTTTACCCTCGA
ACCCTTCTTTACCTTCCAATTGCTTGTTTTCACTCAAGACCGGTCTGTGTCTTCTGATTACCAAAAGCATGCGGAAATGC
GCAAATATGAGCCTGCCACTAAACCTCTTGAAGTGTCCATTGGTATTCTGTGACAGATTGGACCATTGGTATCTTCTGAG
------------AATTCATTTTTCAACTCTTAGCCAGATTGTGATTTTCTGCGGTGTGTTTGACTTGCTA-GGTTCATCC
TCTTATAAGCTTCAATTTGTAGTATCA-----------------------------------------------------
---------------------------------------------TAGCATTTACTTTGATGCACATGAACTACTATTTA
ATAT------TCCTAGCATGTTCAGTATCTAACTCTTTTTGGACCATAGCT--TATATACCTTTAAATGCGTAAACACCA
TTTACTTTACGGTCATTTTCAGTATATTTGGAGCACGATAACAAGTGCACCATGACGTTTTGTATAGGTGGGATAGACTT
GAGGAACTTTGGTGACGACGATTCCAGCGATAGCCCTTACGGGAGCTTTGGCGGCAAGACATCTTTTACGTGGTACTGGC
CCGGTGAGGAGGAGGATGATGACCTTCCTAATGGGTTCCAATGGAGGGAGGAGCCTCGGCCGAACAAATCAAGGGAAAAA
GTTTGGAACGAGAGCGATGTAGAAGAAGAAGAGGCTCCTCGTCGTGACGATCTGAAAAGCCATAGAATATCCCTTGGTTT
GCCAGCTTTGGGCCCCTTAAAGCTTGATCATATTAAGTCCGCGTAGGTCTTCGAGCATCTCCATAGCATTTGCAACAATT
CTGATAAGCGGGCTCCTGATTGGTTTTTCTTTCTTGGTGCTACGTTTCTGCAGTTTTCGCGCGTCGGCTCTCAAGTGGCA
CCCGGACAAGCACCAAGGATCTTCACAGGTCAGTATTGGCTTGTCTTTGCAACAACCTCCGGCGCACTGGGTGCGAATGC
TGAGCTAGAACCTGTGTAGGGGTGTTGATTCTCAACAAAAGTGTGTATTTTTTCAGGCTGAAGCAGAGGATAAGTTCAGG
CGCAGCGTCGAAGCGTACAACGCCTTGTCTGGTGCTTTCAAACGGAGTAGCTAAGTAGCCGCCGGTCTGGTCCTTGAAAA
GCATGCAAGAATAA-GGGGAATTTTCCTTTCGCGGAACTAGGCGGCGTCGATGAAATTAGGGTTTCAAAACCAACTGAAT
GAGTATTTCGTGCTCAGATTCATCAGGGGTCTGAAGATGAGCCCCTAGTAGAAGAATATGTAATG-GATAAATGCAGTCA
GAATGAGTTTTTTCTTTTGTTTGACATCACATAGTCAGAATGAGTTGCCAAGGAGAGTTGTTGCCAAGGAGCATTCATGT
AATATATACAAGTTTTGAACCAGAGACCAAATTATTTACATGCGTCAGCTAATGCACATTCCTAAGCCAATGCTGCTTTT
GGCTTACTGTCCAAATATGCCAATGCACATTCCAAATAAAGCCAATG---------------------------------
-----------------------CTGCTTTTGGCTTACTATTCAAATGTTTGCATTTCGCTC------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TTGTCCGTAACATGT
AAGTTTTTCAAAAATTTGTCAGGCAGCTGAATCTGAAAGCCAAAGCTGAATCAGAAAATTTTGCACAATGTTCCTAATAA
AGCCAATGTTCAGAACACTTTCAGATTGAAGGCCTTATAAACCAGTGATGAACCGTTGATAATCGCATGGAAAATGGTCC
ATGGATGACCACTGTATAACGCCTTGAGATCTT--AAAAAATCCATAATTTACCATGATCCTCCCCTCAAAGA----AAT
AATAAAGATATAG--TACATAGCAAAAACCATGAGCTATTACAGACAACTCCAACAACAAATCAAGCCAACCCAAGTTTG
ACAACTGATCTCACAAACATACTGTGACAATGCACAAACATAGATATAGTGTACTTGCACTTGCACTTGCACCATGGAGC
CGCCACGTATATAGGCGGCATATCCCGAGAGTACTCACGTCACGTCTGGAAAAAAAACATAGCTTGCAAATACGCAATAC
ATTTCTAGAAGAATGAAC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S---S----S--S-S----S-------
S---S-S---SS------------S------------------------------S-------------SS-----SS-S
S-------------------------------------------------------------------------------
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---------------------------------------------------SSSSSSSSSS-------------------
-------------S---SSSSSSSSSSSSSSSSSSSSS----S-------S--------------S-S--S-----S---
-SSSSSSS-----------SS--------S----------------SSS-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
---SS---S---------S------SS---------------------S--S---S--S----S--------S-------
-----------S-----------------------------S-------------SS-SS---------S----------
SSS--------------SS-S--SS-----S-------------------------------------------------
-S-S----SS----------------S-----S-----------SS-----S-----------SS--------S-S---S
----------------S----S-----S-----S-SSSSSSSSS-------------S-SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS---S-------S-------------------------SS--------S-------------
----------------------------------------------S------------S-----S--------------
S----------------SS--------------------------------------------------S---------S
---------S---S-S-------S------------------------------------------S-------------
-----------------S---------S----------SSSSSS---S-----S--------------------------
----------------------------------------------S-S-------------S-----S-----------
--S---------S----------------S-------------S--S--S------------------------------
----SSS--SS----------------------------------------------S-----------------S----
-----------------------------S----------S-------------SSSSSS-S-SSS--------------
---S----S----S----SSSSS-SSSSSSS-SSSS-S-SSSSSSS-SSS-S----------------------------
---S--------------S--------------------------S--------S-----------S---S---------
------S---------------------------S-----------------------------S------S----S---
----------------------------------S-S--SSSSSSSSSS-SSS-------------SS---------S--
--------------------------------------S---------------S-S--S------S-------------
-------S------------------SS-----------------S---------------S------S-----------
-------------------------S----SS------------------------------S----------------S
--------------------------------------------------------S-------S---------------
-------------------------------------------------------------------S------------
S---------------------------------S------------S--------S----S---------------SS-
S-----------------------S--------------------S-S-----------------------SSS--SSSS
SSSSSSSSSSSS-------------------------------------------S-----------------S------
---S-----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------
----SSSSSS--------------------------------------S--SS----------------S---S------
---S----------S----------------S-----------------------S-----S------------------
------------------------S--S----------------------------------------------------
--------------------------------------------------------------------------------
--------------S--------------------------------------S--------------------------
-----S------S--------------------S--------------------------S--------------S----
---S------------------SS----------S------------------------------S--------------
-----------------------------------S------SSS--S--------------------------------
-----------------------------------S---------S----------------------------------
--------------S-----------------------------------------------------------------
--------------S------------------------------------------------------------S----
------------------------------S---------------------------S-S----S------S-------
--------------------------------------------------------------------------------
------------S-------------------S-------S--S------------SS----------------------
-----------------------------------------S----------------S---------------------
-S--------------------------------------------------S--SS-S--------S------------
--------S---S-----S-------------------------S---------S-----S-S--------S-------S
--S-------------------SSSSS---------S----------------------------------S--S-----
------------------------------------------------S-------------------------------
-----------------------------------------------------S--------------------------
--------------------S-----------------------------------------S-------SSSSSSS---
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
--------------------------S-----------------------------------------------------
------------------
>forward_96
----------------------------------------------------------------------------GAAC
AAAACCCACGCACGAA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_2910
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------CCCGGGCACTACATAGTACG-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>forward_1882
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TCAAGCTTCCCCTTCCCCTA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------
>reverse_3933
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------CCCCCAGCGACAAGTATTGT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>forward_3902
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------ACAATACTTGTCGCTGGGGG------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>reverse_4953
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CGCACACA
TAGTGGAGGGTT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
