>input_sequence_32332
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-----------ATGGCTCCGCATTACCAGGCCGCTACGCTGATTGCTGCTCCGTCCTATCCGAACTCCATTACCTGGTCA
AGCGAGAACTTGGTGGCTGTTGC-TCTGGTCACATTGTCACTATCCTGGTATGTGCAATTTCATCAACCTAAGGTATTTG
CCTTCAGGCATTACTGTACTTCATCAACTG--------------------------------------------------
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-------------------GATTGACCTTGCATTCATCATGTTTTTTTAATTATAGAACCCAGCCGCAATTGAAGGGCCT
CGTGGATTTGTCTTGCTTCGCCCTAGAGATCCTTTTCCCATTGGAGTGGTTAAAAGAGAAGGTTTCTTGTCTTCACAAAA
ACACGAGCATTGCACTATGTTCCTTTTTTTTTGTA-TAGTTCATGTTGGTAGGCTACTCATGCAATTTGATGGATGGAAC
AAACTGGGATAGAAATTTAATAATGATATTCTGCAAATTAAGTGCTTGTGAGAGTACCACCTATGTAGTTAGTTTGGAGA
CGATGGGTAATTTGAAGTTTTGAATTGTTATACTCACTTACTCAGTGATCAATTTGAAGTTTCTTCCCAATATCAACATT
GCAGTGAGAATTTAATGCTGATATGCTATTTGAATTGAATGGAAAAGCCAGAAACATTTGAGGCTATAATGCTTTAACTG
TCTTGGCTCTTGGTCAGTGATAGTTTAACAAGTCAGCTGCTTTACGACAATTGCAAATTAACAGCGCTTTGCTCGATCTG
AAATGTTCAATTCTCAACGGATGCAGATCTCCTTGAACCATGTTTAGTCCCCACTTTCTTAGTGTGTGATACTGAACCAT
GCGCACGGTCAATTTCATGGTCTCGACAAGGCTTTGCACCTAATTCTGGGTATATATAATTTTAGTGGTATTCAAAGCTA
TTTTTTGTCTTAATGAAAATTTTATCGCC---CATCTTCTTGTTTATATGGATGATCATTTCAGTTGTTTGCTTGCCGTT
TGTACTGTTGATGGTCATGTAAATCTTTACCGCCCACCAATTTGGGAATTCTGTGATGAATGGGTTGAGGTAAGCCTATT
CAACCAATGTTTATAAATTTTAATATGCACAATTTTTCATATAAAAACAGCTGGAAGGTTAGATTTAATGCGCACCAAAT
TTCTATTTTGCCACACTGATAGTTCTTCTCATGTTCCACTTACGGCCAAAGTGATCTGTAAATATTCCTGGGGGACAAGG
AAGTCAGGATAAGCTCACCATTAACAGCTTCAGCTAGCATGCATTCTATTTATTTGTACAGTACTACTTTC---------
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-----------------------------CCTCTGTTAGAAATAAA-TAAACTTGTACTTTGCAGTTTTGATTTGTCATT
TAAAACACTTTTTT-T-GTTTTCTATCATT-TTTTTTACAGCTTTGTTCTTGTCAGAAGTTAAATTTTCTGTTTCGGTCC
ATTGCTTTTTGTTCATCTACAACAGATGGCCTAGGTTGCAGATACCACTATGCTCATAAACTTCTATTCTGTTGCTCTAG
GTCTCGGATGTTTCTAAATTACTGTTCAACTATTACAAAAGTATAAACTTTGGAGAGGATGATAGTCCTGATTCAATTCC
TCAGGTGTGCCCC-TTCCACTCGAACACTGGGAATTTCATTTGCTGGATTACCTCAGAGTTTTATTGTTCAATGTTTTTT
GTTCATATATTAGGAAAAGGCAAATAGTGAGCAGACACATGCGATGGAATGTACTGGTGAATTGCAAGGACCTCTTTCCT
GCAGCGATCTTGGGCGGAGAAAAAGGAAACCATCAAGGTGAATGATGCTTTCCTATTTCCATCATCAAGTTCTTTTCATA
GCATTGTGGCTTTGCAGTTAAGCACCATCATTTTTT---CCCAAGTATGGCAAAAACCTGAGCCAAGAATTTC-------
-------------------ATATATAAACCTGAGCCAAGAATTTCATATACTAGAAATATTGCCACACATTATTAGGGTT
TGACATTTGTGTATGGCATGAACAAAGAAGCCCTTTAGATTTTTCTCCTCTGCCCCTCTTAGGGTTATTTGTTGTATTTC
CTTGCATGAAGCCAGCATTGATATATTGTGCCTGAGTTTATTTTAAGTAGATCTCGTTTGATCTTAGATTTGAAAGCTAT
GTTTATGATGAGGATGAAGGTGATTTAGATGCTTCAAAGGATGCAGACTTCTGGCTCAATCCATGCTGCAAGTCAAAGAA
GATATCTATGAAGACGGTATGGACTTAGCATGTTCACATGTTCGGATCTACTCTGCATATTCACACGCAGGCTGAAATTT
TGGGTTAAATTGATTCAGCTTTGAGTCGTAAAAGGCATAGAAATGGCTTTCCTTAGAATTTATCAAATGAAACAACTAAT
TATCCTGAAAATCCAAACTATTTCATGGCCTATATGAGTTTTGGCTTTTATTTTTCATACACCCCCAGACATCTATTTGG
TGTTCTATTCTAGTTAACCCAATTGTGTCTCCAGATTGTCAAATCTGGGCGTACAACTGCTATCGTAA------------
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>chr3A_1_TraesCS3A01G254800
ACTAGCAGGCGGGCGGTGGCTAGGGTGCGGGCGTGCATCGAGAGTTGCCGATGCAAATGCAGTAGGGATTGGGAGAAGGA
TTTTATCGCTCTCCGGGCTGAGTAGTTGGGCCGTGGGCTACGTAGGTTTCTCTGGATTCGATCTATTTCTCGGTGCTTCG
GTGTATCCGGATGCTCGATACATATACCCGAATTAATCGAAGAAAGTTCGGTTTTACGGATGGGCTGACCGAATTTATGA
CCGAAGGATTTGGTTTCGGTGCCTTCGAGTTCGGTCTCAGTTAGTTCGGTTTGGTATTTTCGTCATCGGTTTATATGCCC
ATCCCATTAGGCATGGTTTTCATCCGCGTGGATAGAAACGAATACAGACGGATAAAATGGGTTGGCCCGTTGGAGTTTGC
CTTAGCACGTCCGAGGAAATCCAGATGCACGGACGCGGTGTACACGGTCCGATCGGCGCGAGGAGGATCGGAATCCGTCC
GATCGAT-------------------------------TTCCACACCAGCCAAAACCCTCGCCACCGCCGCCGGCTACNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
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--------------GTACTCGAGATAGCTGGTCGCCTCGGAGTTGTGGTAGCTTAGTATTAATGCGACTTCTCAGAACAT
ATAAATCCACTTTCTTACTGCTGGCAAACTACAAAAATCCATTTTCTTAGTATTATCGCTGGCACTGAAAGTAAAGGTTA
ACTTGAGTCTCATAG------ATCATATGACGTGGGTCTTGCAGATTTTAACTTGCGTTTGTTGCTCTAAGGACGCTTCA
ATCTTTGTGCCATGGCTCCGCATTACCAGGCCGCTACGCTGATTGCTGCTCCGTCCTATCCGAACTCCATTACCTGGTCA
AGCGAGAACTTGGTGGCTGTTGC-TCTGGTCACATTGTCACTATCCTGGTATGTGCAATTTCATCAACCTAAGGTATTTG
CCTTCAGGCATTACTGTACTTCATCAACTG--------------------------------------------------
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-------------------GATTGACCTTGCATTCATCATGTTTTTTTAATTATAGAACCCAGCCGCAATTGAAGGGCCT
CGTGGATTTGTCTTGCTTCGCCCTAGAGATCCTTTTCCCATTGGAGTGGTTAAAAGAGAAGGTTTCTTGTCTTCACAAAA
ACACGAGCATTGCACTATGTTCCTTTTTTTTTGTA-TAGTTCATGTTGGTAGGCTACTCATGCAATTTGATGGATGGAAC
AAACTGGGATAGAAATTTAATAATGATATTCTGCAAATTAAGTGCTTGTGAGAGTACCACCTATGTAGTTAGTTTGGAGA
CGATGGGTAATTTGAAGTTTTGAATTGTTATACTCACTTACTCAGTGATCAATTTGAAGTTTCTTCCCAATATCAACATT
GCAGTGAGAATTTAATGCTGATATGCTATTTGAATTGAATGGAAAAGCCAGAAACATTTGAGGCTATAATGCTTTAACTG
TCTTGGCTCTTGGTCAGTGATAGTTTAACAAGTCAGCTGCTTTACGACAATTGCAAATTAACAGCGCTTTGCTCGATCTG
AAATGTTCAATTCTCAACGGATGCAGATCTCCTTGAACCATGTTTAGTCCCCACTTTCTTAGTGTGTGATACTGAACCAT
GCGCACGGTCAATTTCATGGTCTCGACAAGGCTTTGCACCTAATTCTGGGTATATATAATTTTAGTGGTATTCAAAGCTA
TTTTTTGTCTTAATGAAAATTTTATCGCC---CATCTTCTTGTTTATATGGATGATCATTTCAGTTGTTTGCTTGCCGTT
TGTACTGTTGATGGTCATGTAAATCTTTACCGCCCACCAATTTGGGAATTCTGTGATGAATGGGTTGAGGTAAGCCTATT
CAACCAATGTTTATAAATTTTAATATGCACAATTTTTCATATAAAAACAGCTGGAAGGTTAGATTTAATGCGCACCAAAT
TTCTATTTTGCCACACTGATAGTTCTTCTCATGTTCCACTTACGGCCAAAGTGATCTGTAAATATTCCTGGGGGACAAGG
AAGTCAGGATAAGCTCACCATTAACAGCTTCAGCTAGCATGCATTCTATTTATTTGTACAGTACTACTTTC---------
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-----------------------------CCTCTGTTAGAAATAAA-TAAACTTGTACTTTGCAGTTTTGATTTGTCATT
TAAAACACTTTTTT-T-GTTTTCTATCATT-TTTTTTACAGCTTTGTTCTTGTCAGAAGTTAAATTTTCTGTTTCGGTCC
ATTGCTTTTTGTTCATCTACAACAGATGGCCTAGGTTGCAGATACCACTATGCTCATAAACTTCTATTCTGTTGCTCTAG
GTCTCGGATGTTTCTAAATTACTGTTCAACTATTACAAAAGTATAAACTTTGGAGAGGATGATAGTCCTGATTCAATTCC
TCAGGTGTGCCCC-TTCCACTCGAACACTGGGAATTTCATTTGCTGGATTACCTCAGAGTTTTATTGTTCAATGTTTTTT
GTTCATATATTAGGAAAAGGCAAATAGTGAGCAGACACATGCGATGGAATGTACTGGTGAATTGCAAGGACCTCTTTCCT
GCAGCGATCTTGGGCGGAGAAAAAGGAAACCATCAAGGTGAATGATGCTTTCCTATTTCCATCATCAAGTTCTTTTCATA
GCATTGTGGCTTTGCAGTTAAGCACCATCATTTTTT---CCCAAGTATGGCAAAAACCTGAGCCAAGAATTTC-------
-------------------ATATATAAACCTGAGCCAAGAATTTCATATACTAGAAATATTGCCACACATTATTAGGGTT
TGACATTTGTGTATGGCATGAACAAAGAAGCCCTTTAGATTTTTCTCCTCTGCCCCTCTTAGGGTTATTTGTTGTATTTC
CTTGCATGAAGCCAGCATTGATATATTGTGCCTGAGTTTATTTTAAGTAGATCTCGTTTGATCTTAGATTTGAAAGCTAT
GTTTATGATGAGGATGAAGGTGATTTAGATGCTTCAAAGGATGCAGACTTCTGGCTCAATCCATGCTGCAAGTCAAAGAA
GATATCTATGAAGACGGTATGGACTTAGCATGTTCACATGTTCGGATCTACTCTGCATATTCACACGCAGGCTGAAATTT
TGGGTTAAATTGATTCAGCTTTGAGTCGTAAAAGGCATAGAAATGGCTTTCCTTAGAATTTATCAAATGAAACAACTAAT
TATCCTGAAAATCCAAACTATTTCATGGCCTATATGAGTTTTGGCTTTTATTTTTCATACACCCCCAGACATCTATTTGG
TGTTCTATTCTAGTTAACCCAATTGTGTCTCCAGATTGTCAAATCTGGGCGTACAACTGCTATCGTAAATGGGTTAGGTG
GCTCACAGGATACGAAAGCAGCAGTCTCTTGCAACAAAGAAAACGCATGTCTTCCTCTTATCACCGCAGAACAGTATGCA
CTTCAAAATGCAATTTTGTCTTCTCTGGTAGTTGCATGGTCTCCAGTTGTGCCATCACGCGACACTACTTCACATTTGTT
GAGAAATTGGTGCATTCTTGCTGTTGGCTCCAAGTCTGGGGACGTTTCATTTTGGAAAATATGCAAGCCTGAGTATTACA
CCATAGATGTTTGCATGGTTACCAGAGATCCAATACTCATCGGGGTTCTCAAAGCACATAATTCATGGGTTAGTGCCATC
AGTTGGGAAGTTTCCTTTGCAGACTCTTCAAAGTCCTCACTACTTTTAGCAACTGGATGTTCGGATGGAAGGTGAACACA
ATCACGTCAATTCTTTTCCAGTCTTTCCCACTGTGTGCTTGACATGTTTTTGTTGACTTTGCTCCTTGTATAATTCATTA
AATGGCAGAAGGATAATGTGTTTAATGAACAATGAAGTTTGAACATGACATTTGAGCTAGTAAATAGTGCTTCAAACAAG
TTCCCAGATAAGCACGAGACATGCATTTTCATGCTTCTGCCTTAAATGAAAATTCTTTGTAAAGATTATTAAAAAGCTAA
ACTCACTACTGTATCATGTGAAACCCACTTATTGATGAAAATTATCACCATTGGAAAATGATTTTCCTGATCTTCAGCAC
CAAATATAAATTTTACCACCTCTGTTCTTGAATAGATGACATCCTAGAATGTGTG-AGTCAAACTTCCCTAACTTTGGCT
CATATTATATCAAAACTTATTTTGTTTCCTCATTGAAATTGATATTATTACATTTGTAATGAATGCAACATATGTTTTTT
-------AAAATGAAAAATATATTCATAATGTCACTAGATTTGTATCGCCGTATACATGTGAAAGAATGGTCAAAGTTGC
GTATTGGAGACCATGTCCAAATTTAAACTGTATATG
>chr3D_325
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----CATTGGGCATGATTTTCATTCGCGCGGATATAAACGAACGCAGATGGACAAAATAGGTTGGCC-GTTTGAGTTTGC
CTTAGCACGTCCGAGGAAATCCAGATGCACGGACGCGGTGTACACGGTCCGATCGGCGCGAGGAGGATCGGGATCCGTCC
GATCGATTCTCACATGTGACAAATCGCCAGTCCGCTGGTTCCCCACCAGCCAAAACCCTCGCCACCGCCGCCGGCCATCT
GCGGCGACATTCTGTTGCCTGCGCCGCCGCCTTCTAAGGCATTGCCGCCGTTGTACGCCGACGCCCACACCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCCATCCTATTACTCGTGAAATACCTAGAAA
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--------------------------------------------------------------------------GACAAA
TATTTAAGAACGGAGGGA------------------------------------GTACTTTGCAGTTTTGATTTGTCATT
TAAAACACTTTTTTTT-GTTTTCTATCATT-T-GTTTACAGCTTTGTTCTTGCCAGAAGTTAAATTTTCTGTTTCGGTCC
ATTGCTTTTTGTTCATCTACA---GATGGCCTAGGTTGCAGATACCACTATGCTCATAAACTTCTATTCTGTTGCTCTAG
GTCGCAGATGTTTCTAAATTGCTGTTCAACTATCACAAAAGTATAAACTTTGGAGAGGATGATAGTCCTGATTCAATTCC
TCAGGTGTGCCCCCTTCCACTCGA-----------------------ATTACCTCAGAGTTTTATTGTTCAATGTTTTT-
GTTCATATATTAGGAAAAGGCAAATAGTGAGCAGACACATGCGATGGAGTGTACTGGTGAATTGAAAGGACCTCTTTCCT
GCAGCGATCTTGGGCGGAGAAAAAGGAAACCATCAAGGTGAATGATGCTTTCCTATTTCCATCATCAAGTTCTTTTCACA
GCATTGTGGCTTTGCAGTTAAGCACCATCATTTTT---CCCCAAGTATGGCAAAAACCTGAGCCAAGAATTTC-------
-------------------ATATA--------------------------CTAGAAATATTGTCACACATTATTAGGGTT
TGACATTTGTGTATGGCATGAACAAAGAAGCCCTTTAGATTTTTCTCCTCTGCCCCTGTTAGGGTTATTTGTTGTATTTC
CTTGCATGAAGCAAGCATTGTTATATTGTGCCCGAGTTTATTTTAAGTAGATCTCGTTTGATCTTAGATTTGAGAGCTAT
GTTTATGATGAGGATGAAGGTGATTTAGATGCTTCAAAGGATGCAGACTTCTGGCTCAATCCATGCTGCAAGTCAAAGAA
GATATCTATGAAGACGGTATGGACTTAGCATGTTCACATGTTTGGATCTACTCTGCATATTCACACGCAGGCTGAAATTT
TGGGTTAAATTGATTCAGCTTTGAGTCGTAAAAGGCATAGAAATTGCTTTCCTTAGAACTTATCAAATGAAACAACTA--
--TCCTGAAAATCCAAACTATTTCACGGGCTATATGAGTTTTGGCTTTTATTTTTCATACACCCCCAGACATCTATTTGG
TGTTCTATTCTAGTTAACCCAATTGTGTCTCCAGATTGTCAACTCTGGGCGTACAACTGCTATCGTAAATGGGTTAGGTG
GCTCACAGGATACCAAAGCAGCAGTCTCTTGCAACAAAGAAAACACATGTCTTCCTCTTATCACCGCAGAACAGTATGCA
CGTCGAAATGCGATTTTGTCTTCTCTGGTAGTTGCATGGTCTCCAGTTGTGCCATCACGCGGCACGACTTCATATTTGTT
GAGAAATCGGTGCATTCTTGCTGTTGGCTCCAAGTCTGGGGACGTTTCATTTTGGAAAATATGCAAGCCCGAGTATTACA
CCATAGATGTTTGCATGGTTACCAGAGATCCAATACTCATCGGGGTTCTCAAAGCACATAATTCATGGGTTAGTGCCATC
AGTTGGGAAGTTTCCTTTCCAGACTCTTCAAAGTCCTCACTACTTTTAGCAACTGGATGTTCGGAT----GGTGAACACA
ATCACGTCAATTCTTTTCCAGTCTTTCCCACTGTGTGCTTGACATGTTTTTGTTGACTTCGCTCCTTGTATAATTCATTA
AATGGCAGAAGGATAATGTGTATAATGAACAATGAAGTTTGAACATGACATTTGAGCTAGTAAATAGTGCTTCAAACAAG
TTCCCAGATAAGCACGAGACATGCATTTTCATGCTTCTGCCTTAAATGAAAATTCTTTATAAAGATTATTAAAAAGCTAA
ACTCACTACTTTACCATGTGAAACCCACTTATTGATGAAAATTATCCCCATTGGAAAATGATTTTCCTGGTCTTCAGCAC
CAAATATAAATTTTACCACCTCTGTTCGTAAATAGATGACATCCTAGAATGTGTGCAGTCAAACTTCCCTAACTTTGGCT
CATATTATATCAAAACTTATTTTGTTTCCTCGTTGAAATTGATATTATTACATTTGTAATGAATGCAACATATGTTTTTT
AGTTTGAAAAATGAAAAATATATTCATAATGTCACTAGATTTTTATCGCCGTATACATGTGAAAGAACGGTCAAAGTTGC
GTATTGGAGACCATGTCCAAATTGAAAGTGTATATG
>chr3B_325
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----CATTGGGCATGATTTTTATTGGCGCAGATAGAGACGAACGCAGATGGACAAAATGGGTTGACGTGTTGGAGTTGGC
CTTAGCACGTCCGAGGAAATCCAGATGCACGGACGCGGTGTACACGGTCCGATCGGCGCGAGGAGGATCAGGATCCGTCC
GATCGATTCTCA--TGTGACAAATCGCCAGTCCGCTGGTTCCCCACCAGCCAAAAAACTCGCCACCGCCGCCGGCTATCT
GCGGCGACATTCTGCTGCCTGTGCCGTCGCCTCCTAAGGCATTGCCGTCGTTGTACGCCGACGCCCACACCGTGGAGTAC
GGCGACCCCCCCCCCCACCCCAAATCCTGGATGCGGTGAGTCGTGTATTT------------------------------
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-----------------------------------------------CCGCCACCCTATTACTCGTGAGAAAAAGTGGAA
CTCCTCTCGATTTGGTACTGGAGATACCTGGTCGCCTCGGAGTTGTGGTAACTTAGTATTAATGCGACTTCTCAGAGCAT
ATAAATCCACTTTCTTACTGCTGGCAAACTACAAAA-TCCACTTTCTTAGTATTATCGCTGGCACTGAAAGTAAGG---A
ACTTGAGTCTCATAGTACTAGATCATATGACGTGGGTCTTGCAGATTTTAACTTGCGTTTGTTGCTCGAAGGACGCTTCA
ATATTTGTGCCATGGCTCCGCATTACCAGGCCGCTACGCTGATTACTTCTCCGTCCTATCCGAACTCCATCACCTGGTCA
AGCGAGAACTTGGTGGCTGTTGCTTCTGGTCACATTGTCACTATCCTGGTATGTGCAATTTCATCAA---AAGGTATTTG
CCTTCAGACATTACTGTACTTCATCAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGATTGACCTTGCATTCATCATGTC-TTTCAATTATAGAACCCAGCCACAATTGAAGGGCCT
CGTGGATTTATCTTGCTTCGCTCTAGAGATCCTTTTCCCATTGGAGTGGTTAAAAGAGAAGTTTT-TTGTCTTCACAAAA
ACACGAGCATTGCACTGTGTTCCTTTTATTTTTGATTAGTTCATGTTGGTAGGCTACTCATGCAATTTGATGGATGGAAC
AAAGTGGAATAGAAATTTAATATTGATATTCTGCAAAGTAAATGCTTGTGAGAGTACCACCTATGTAGTTAGTTAGGAGA
CGATGGGTAATTTGAAGTTTTGAATTGTTATACTCAGCA--------ATCAATTTGAAGTTTCTTCCCAATATCAACATT
GCAGTGGGAATTTAATGCTGATATGCTATTTGAAATGAATAGAAAAGCCAGAAACATTTGAGGCTATAATGCTTTAACTG
TTTTGGCTCTTGGTCAGTAATAGTTTAACAAGTCAGCTGCTTTATGACAATTGCAAATTAACAGCTCTTTGCTCGATCTG
AAATGTTCAATTCTCAACAAATGCAGATCTCCTTGAACCATGTTTAGTCCCCACTTTCTTAGTGCGTGATACTGAACCAT
GCGCGCGGTCAATTTCATGGTCTCGACAAGGCTTTGCACCTAATTCTGGGTATGTATAGTTTTANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----------------------------------------------
--------------------------------TTTTTTCCCTAAGTATGGCAAAAACCTGAGCCAAGAATTTCATATACA
AACCTGAGCCAAGAATTTCATATA--------------------------CTAGAAATATTGTCACACATTATTAGGGTT
TGACATTTGTGTATGGCATGAACAAAGAAGCCCTTTAGATTTTTCTCCTCTGCCCCTCTTAGGGTTATGTCTTGTACTTC
CTTGCATGAAGCCAGCATTGTTATATTGTGTCTGAGTTTATTTTAAGTAGATCTTGTTTGATCTTAGATTTGAAAGCTAT
GTTTATGATGAGGATGAAGGTGATGTAGATGCTTCAAAGGATGCAGACTTCTGGCTCAATCCATGCTGCAAGTCAAAGAA
GATATCTATGAAAACGGTATGGACTTAGCATGTTCACATGTTCGGATCTACTCTGCATATTCACACGCAGGCTGAAATTT
TGGGTTAAATTGATTCAGCTTTGAGTCATAGAAGGCATAGAAATGGCTTTTCTTAGAA----------------------
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>chrUn_1864
TGGTATCCG-----------------------------------------------------------------------
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--------------------------------------------------------------------------AAGCTA
TTTTGTGTCTTAATGAAAAGTTTATCGCCTAACATCTTCTTGTTTATATGGATGATTATTTCAGTTGTTTGCTTGCCGTC
TGTACTTTTGATGGTCATGTAAATCTTTACCGCCCACCAATTTGGGAATTCTGTGATGAATGGGTTGAGGTAAGCCTATT
CAACCAATGTTTGTAAATTTTAATATGCACAATTTTTCATGTAAAAACAGCTGGAAGGTTAGATTTAATGCCCGCCAAAT
TTCTATTTTGCCACACTGATAGTTCTTTTCATGTTCCACTTACGGCCAAAGTGATCTGTAAATATTCCTGGCGAAGAAGG
AAGTCAGGATGAGCTCACCATTAACAGCTCCAGCTAGCTCGCATTCTA--TTTTTGTACAGTAGTACTCCCTCCGACCGA
AAATACTCGTCGGAGGAATAGATGTATCTAGATGTATTCTAGTTCTAGATACATTCATTTTTATGCATTTCTCCGACAAG
TATTTCTGGACAGAGGGAGTACTTTCCTTCCTCTGTTAGAAATAAAGTAAACTTGTACTTTGCAGTTTTGATTTGTCATT
TAAAACACTTTTTTTTTGTTTTCTATCATTTT-TTTTACAGCTTTGTTCTTGCCAGAAGTTAAATTTTTTGTTTCGGTGC
GTTGCTTTTTGTTCATGTACA---GATGGCCTAGGTTGCAGATACCACTATGCTCATAAGCTTCTATTCTGTTGCTCTAG
GTTGCGGACGTATCTAAATTGCTGTTCAACTATTACAAAAGTATAAACTTTGGAGAGGATGATAGTCCTGATTCAATTCC
TCAGGTGTGCCCCCTTCCACTCAAAACCGAGAG-TTTCATTTGCTGGATTACCTTAGAGTTTTATTTTTCAAAGTTTTC-
GTTCATATATTAGGAAAAGGCAAATAGTGAGCAGACACATGCGATGGGATGTACTGGTGAATCGCAAGGACCTCTTTCCT
GCAGCGATCTTGGGCGGAGAAAAAGGAAACCATCAAGGTGAATGATGCTTTCCTATTTCCATCATCAAGTTCTTTTCACA
GCATTGTGGCTTTGCAGTTAAGCACCATCAATTTTTT-------------------------------------------
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>chrUn_2308
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-----------------------------------------------------------------------TTTGTCATT
TAAAACACTTCTTTTTTGTTTTCTATCATT-T-TTTTACAGCTTTGTTCTTGCCAGAAGTTAAATTTTTTGTTTCGGTGC
GTTGCTTTTTGTTCATGTACA---GATGGCCTAGGTTGCAGATACCACTATGCTCATAAGCTTCTATTCTGTTGCTCTAG
GTTGCGGACGTATCTAAATTGCTGTTCAACTATTACAAAAGTATAAACTTTGGAGAGGATGATAGTCCTGATTCAATTCC
TCAGGTGTGCCCCCTTCCACTCAAAACCGAGAG-TTTCATTTGCTGGATTACCTTAGAGTTTTATTTTTCAAAGTTTTC-
GTTCATATATTAGGAAAAGGCAAATAGTGAGCAGACACATGCGATGGGATGTACTGGTGAATCGCAAGGACCTCTTTCCT
GCAGCGATCTTGGGCGGAGAAAAAGGAAACCATCAAGGTGAATGATGCTTTCCTATTTCCATCATCAAGTTCTTTTCACA
GCATTGTGGCTTTGCAGTTAAGCACCATCAATTTTTTTCCCTAAGTATGGCAAAAACCTGAGCCAAGAATTTCATATACA
AACCTGAGCCAAGAATTTCATATA--------------------------CTAGAAATATTGTCACACATTATTAGGGTT
TGACATTTGTGTATGGCATGAACAAAGAAGCCCTTTAGATTTTTCTCCTCTGCCCCTCTTAGGGTTATGTCTTGTACTTC
CTTGCATGAAGCCAGCATTGTTATATTGTGTCTGAGTTTATTTTAAGTAGATCTTGTTTGATCTTAGATTTGAAAGCTAT
GTTTATGATGAGGATGAAGGTGATGTAGATGCTTCAAAGGATGCAGACTTCTGGCTCAATCCATGCTGCAAGTCAAAGAA
GATATCTATGAAAACGGTATGGACTTAGCATGTTCACATGTTCGGATCTACTCTGCATATTCACACGCAGGCTGAAATTT
TGGGTTAAATTGATTCAGCTTTGAGTCATAGAAGGCATAGAAATGGCTTTTCTTAGAA----------------------
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>SNPs
SSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS----S------S-------S----S-------------SS----S---S--------------S------------
-----------------------------------------------------------------------S--------
------------------------------------------S----------------------------------SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
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-------------------S------S-----------------------S-------------------------S---
------------------------------------S----S--------------------------------S-SSS-
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--S-----------------------------------------S--S----------------------S---------
-------------------------------------------------------------------SSS----------
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---S---S--------------S--------------S---S--------------------------------S-----
------------------------------------SSSSSSSSSSS---------------------------------
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----S------------------------------------------------S----S-----SSSSSSSSSS------
----S--------------S------------------------------------S----------------------S
------S-------------------------------------------------------------------------
------------S---------------------------S------------------------------S-S------
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----------S------------------S--------SS--------SS-S-----------S----SS----------
--------------------------------------------------------------------------------
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--------------------------------S-------------------S---------------------------
---------------------SSS--------------------------------------------------------
---S----------------S-----------------------------------------------------------
-------------------------SS-SS-SSS---------------------------------------------S
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------------------------SSSSSSSSSSSSSSSSSSSSSSSSSS------------S-----------------
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----------------------------------------------------------S-------------------SS
SS-----------------------S--S---------------------------------------------------
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-S--S------S-------------------------------------------------S---S------S-------
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--------------------------------------------------------------------------------
------------------S-----------------------------------------------SSSS----------
-----------------------------------------------------------S--------------------
---------------------S----------------------------------------------------------
----------------------------------------------------------S---------------------
----------S--S--------------------------------S----------------------S----------
---------------------------S-S--------------------------------------------------
-------------------------------S------------------------------------------------
------------------------------------------S------------------------S------------
-----------------------S---S--------
>forward_164
--------------------------------------------------------------------------------
----------------------------------------------------------------ATTTCTCGGTGCTTCG
GTGT----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------
>reverse_1248
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------GCTCCGTCCTATCCGAACTC-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
>forward_264
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----AGGATTTGGTTTCGGTGCCT--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2145
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------TGTGATACTGAACCAT
GCGCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1610
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TGAAGGGCCT
CGTGGATTTG----------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2902
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------ACAGATGGCCTAGGTTGCAG---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------
>forward_2320
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------TCAGTTGTTTGCTTGCCGTT
--------------------------------------------------------------------------------
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------------------------------------
>reverse_3963
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------ATCTGGGCGTACAACTGCTA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
>forward_3070
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CCCCTTCCACTCGAACACTG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------
>reverse_4014
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GAAAGCAGCAGTCTCTTGCA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
