>input_sequence_32264
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----------------------------------------CCTACCGCCTTAGCGTTTCCTTTTCGTGGTGGACCCACTC
TCCAGCCCGGTCTGCTACTATGACTAGCCTTATGCCATACTACCATGCACATTTTCCCCCTCTAGAACGACTCATTTTAC
-ATTTATGCCACGCATTGGACGGTGACGGTTGCGAGTCCCCTTGGCCTCGAGCCAGTTCAGTTTCCTAGGCGCGCTACAC
TCCCGTGATAAAGTTACTGTAATACTCCTGCTCAGTAGCACAAGCAGTGGTACTACTGCTCAGTGCACACCACCCAACTC
ACCCACACTTTCCCCGCGGCGATGGGTCGCACGAAGCACGCGGTGGCGGCGACGGCGGCGA------CGACGGAGACGAA
GAAGCGGCTCCGCTTCGAGCTCTCCCCGCGCTGGAGGCCGCCGCCGGCGCTGCGCCAGGTACCGCCGGA------GCCGC
AGCCGGAGAAGAAGAAGAAGCGGGCGTACCGGTTCCGGCCGGGCACGGTAGCGCTGCGGGAGGTCAGGAAGTACCAGAAG
TCCACCGGGCCGCTCATCCCCTTCGCGCCCTTCGTCCGCCTGGTGAGTGTGGGTTGGGTACCCCGTACCCGTGCCCCCCT
CTGCCCGTCCCGTCCTCCGATTTGTACCTGTATCACCGATTCGAGATTCAGTATGCGGAGACAGG-------TGCTCGTC
CTGTGCTGATGGTAAATTTGCAGGTTAAGGAGATCACCGACGACTTGACGAAGGGCGAGATGAACCA---CTGGACTCCT
CAGGCGCTCTTCTCGTTGCAGGAGGTCGGTCAATGGTCAATGCCGAAACCTGCCGTGTACTATTAGGCCTGATGGTTCCC
ATTAAAGAAACCAGCAACTGCAATAGTTCTGAGAATTGTGAGACTGATAAATTTATCACCATAATGCATAGTTCCTGAAT
CTGAATGCTCCGGTGTTCATGCAGTTGATACATCTGTTTAGCACCATGATTGTTCTTTGGTGGCTGGTAACT----CAAA
ACCAAAATCAAATGTCTTTGTGCCA---TAGTTCATAGCTTCTCGTTGTTTGGTCTAAGATATACACTGT----------
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---------------------------CACTGTGTCTTGCAACATAATCATGCCACGCAC-----------GCAAAACTG
AACTA-TTGTTCATATTACATTTTGCTTAAGGGTGTG----ACTGAGAAGTGAGGAAGAGGTAGTCC-------------
----------------------------------AAATTTTTTTTTTGAATTTTATCATGTGATGGTTATGTATCTGAAC
G-CCCAAGGATTTATCTGTATCCACTATCCAGTACAACGACACAAGTGCTT------------------TTATAGAACTA
TA--CAAGATTGCTAGTGCATGGTAAGTACACTAACACAAGTCGCCTCTTGCCAGAAATAATTTCTTCTGCATAACTAGC
AAAATTAACATAGAGTTGACTACATTCCATATG--TGGCCTATCAAATAAGTTGAATGTCCTAATTGTGCTTTCAGTCAC
TGTCCTGTATATTTGCTTTGAGTTTGCACATGATTTTCTTTTCCTTTCCCTCTGCAGGCTGCAGAGTATCACATAGTCGA
TGTATTTGAAAAGGCAAATCTATGTGCCATCCATGCTAAGCGTGTTACCATCAGTAAGTTATCACTGAATGAACACTTCC
TTTCCTTTACAATATTATGCAAAAGGAAACATGGCAGTCATAAAAGCATTTCAATTTCAGGATCATCTTTGCTTTTAT--
-----------------------------------TTGATGTGTTATCTAGTTTCGATGTTGTTTCAAGCTGCAAAAATT
CAATGATTATTAATGATTAGAAG-ATCCACAGTTATCATATCTCAGCAGCTTCTCGTATTTTTTGTTCTC----------
-------------GGTGAACATGTCACAAAACAAAACAGCAGATATGCTAACAATTATGGCTTTTTTTGCGGGAAAACAA
TTATAGCTTGCCACTTGTGAATGGGCCAG-------AGTTTTCTAATGATGCATTT-TAGATATAAAATCTGGTTACTGT
AGCAGGAAATTCAGGGTTGATTACCCTGTTTGTTACTTACCTCGAGGATATAAACATAGCATGAAATCAGAACTTTATTT
CCAAGAT--ATGTTTTATTTCCTCTTAAAGCTTGGGTACTGTTTTACCGAGACAGATAAGTGT-CACTAGAATTATTATC
AT------------------------------------------------------------------------------
-CAAGGTTGCTGTTTCTATTCTAATAACAAATAAATATTTTCAGTTAGGTATGACTTCATATGTATCTTTAAAAGGATGC
TCCTGAACAAATTGGAACTATGTATGCAGAAAATACATGTATACATTAGCATGTTTCTGTTCACCTGACCTTTTTTTGCC
CCTGCAGTGCAAAAGGACATACAGCTCGCGAGGCGTATCGGGGGGAGAAGGCCTTGGTGATACTAATGGAAGATGTTTTC
TGCATCATAGGGAGCAAAGACTGGTGATTTGGTGGTACTAATGGTAGATGTTTTCTGTATTAGGGGTGCAATGCAAAGGC
GCTGATGGTAGTGGCCCAGTATGTTTGTGAGTGTATCGTTAGGAAGTAATGTAGGTGTATTTTCATTTAGTTAGCA--TG
TCTTCGAAGTTGATCTGGTTC-----------------------------------------------------------
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-------------------------------
>chr1A_1_TraesCS1A01G306500
GTCGCCCACAATCGAAGCAGAAGTGGGGGACTTTCTCATAGTAGAAGTCAAACCATGTGCCCACCTTATCATCTTTAGAT
CTCTTCAAAGTAAAGCCTCGGACTAGCGGTTCATAAACATCAATTTTTTCTCGAACTCGTAACTGGTTTCCCCTTGCAAC
TCCATCCTTGTCCACATCAACTCTCACGACTTCTCCCAACCAATTGCCCAAAGCTTTCCCAAACACCTCTGTCCTCTTAT
CCGGTGGAAGATCCGTCACCCTAACCCACATATCGACTCTGTCAAACACCATCTCCGAGAGTCTCGTTTTTCCTTCATAT
TCCGTCATGATCAGAACACTAAAATCAAACTGCCAAGGCCCATTGTTCATAACATGTCTGTAGTCTCCCTCACTTCCAAA
GTGTACCACAAAAATATTTGAGCCCCTGTCCCTGAACTGAGCTTCTTTATGCAGCCCCCACGCCCGAGTCATAGCTTTTT
CTAGTGCTGTCTTGTTCATCGGACGAGTGGTACAAGCCTTCCCCACCGCAGACCATCTCGAACTCTTAGGCATCTCTGTC
TCCTGATCTTCAAAGATGAAACCCTCAGCTTCTTTATCCATAAGAACCATGCCTCCCAATCTTGCAGACAAGCTCGACGT
CGGATCCGGGGTCTTGCACTCCAACGGGGATTTTGATTCTTCTCTGTTATTTAGGCCATCCCCCTTGTGCGCCGTCGGCG
TTGCCGCCGCCGTCTTCATTGGTGTAGCCGTCTTTGACCTCCCAGTCGCTGGAGTGGCTGCCGCCGCCTTAGATGTATTC
GAGTTATTCTTCTTCCCCGCCGCCGTCGCCTTATCATCCGCAGTCCCAGCCATGAGCAGCAGCCCACAACAGGGAGAATC
CGTTCTTGGCCCGCGTCTAGGGATGCGCCGTCGCCTCCCTCTCCGCTGCCAGATGCACACCACCCCCGAGCAGCGAAACC
CTAACCCTAGCGTAGGAGCGCAATCGCCTCGCGATCGCCCCCTACCGCCTTAGCGTTTCCTTTTCGTGGTGGACCCACTC
TCCAGCCCGGTCTGCTACTATGACTAGCCTTATGCCATACTACCATGCACATTTTCCCCCTCTAGAACGACTCATTTTAC
-ATTTATGCCACGCATTGGACGGTGACGGTTGCGAGTCCCCTTGGCCTCGAGCCAGTTCAGTTTCCTAGGCGCGCTACAC
TCCCGTGATAAAGTTACTGTAATACTCCTGCTCAGTAGCACAAGCAGTGGTACTACTGCTCAGTGCACACCACCCAACTC
ACCCACACTTTCCCCGCGGCGATGGGTCGCACGAAGCACGCGGTGGCGGCGACGGCGGCGA------CGACGGAGACGAA
GAAGCGGCTCCGCTTCGAGCTCTCCCCGCGCTGGAGGCCGCCGCCGGCGCTGCGCCAGGTACCGCCGGA------GCCGC
AGCCGGAGAAGAAGAAGAAGCGGGCGTACCGGTTCCGGCCGGGCACGGTAGCGCTGCGGGAGGTCAGGAAGTACCAGAAG
TCCACCGGGCCGCTCATCCCCTTCGCGCCCTTCGTCCGCCTGGTGAGTGTGGGTTGGGTACCCCGTACCCGTGCCCCCCT
CTGCCCGTCCCGTCCTCCGATTTGTACCTGTATCACCGATTCGAGATTCAGTATGCGGAGACAGG-------TGCTCGTC
CTGTGCTGATGGTAAATTTGCAGGTTAAGGAGATCACCGACGACTTGACGAAGGGCGAGATGAACCA---CTGGACTCCT
CAGGCGCTCTTCTCGTTGCAGGAGGTCGGTCAATGGTCAATGCCGAAACCTGCCGTGTACTATTAGGCCTGATGGTTCCC
ATTAAAGAAACCAGCAACTGCAATAGTTCTGAGAATTGTGAGACTGATAAATTTATCACCATAATGCATAGTTCCTGAAT
CTGAATGCTCCGGTGTTCATGCAGTTGATACATCTGTTTAGCACCATGATTGTTCTTTGGTGGCTGGTAACT----CAAA
ACCAAAATCAAATGTCTTTGTGCCA---TAGTTCATAGCTTCTCGTTGTTTGGTCTAAGATATACACTGT----------
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---------------------------CACTGTGTCTTGCAACATAATCATGCCACGCAC-----------GCAAAACTG
AACTA-TTGTTCATATTACATTTTGCTTAAGGGTGTG----ACTGAGAAGTGAGGAAGAGGTAGTCC-------------
----------------------------------AAATTTTTTTTTTGAATTTTATCATGTGATGGTTATGTATCTGAAC
G-CCCAAGGATTTATCTGTATCCACTATCCAGTACAACGACACAAGTGCTT------------------TTATAGAACTA
TA--CAAGATTGCTAGTGCATGGTAAGTACACTAACACAAGTCGCCTCTTGCCAGAAATAATTTCTTCTGCATAACTAGC
AAAATTAACATAGAGTTGACTACATTCCATATG--TGGCCTATCAAATAAGTTGAATGTCCTAATTGTGCTTTCAGTCAC
TGTCCTGTATATTTGCTTTGAGTTTGCACATGATTTTCTTTTCCTTTCCCTCTGCAGGCTGCAGAGTATCACATAGTCGA
TGTATTTGAAAAGGCAAATCTATGTGCCATCCATGCTAAGCGTGTTACCATCAGTAAGTTATCACTGAATGAACACTTCC
TTTCCTTTACAATATTATGCAAAAGGAAACATGGCAGTCATAAAAGCATTTCAATTTCAGGATCATCTTTGCTTTTAT--
-----------------------------------TTGATGTGTTATCTAGTTTCGATGTTGTTTCAAGCTGCAAAAATT
CAATGATTATTAATGATTAGAAG-ATCCACAGTTATCATATCTCAGCAGCTTCTCGTATTTTTTGTTCTC----------
-------------GGTGAACATGTCACAAAACAAAACAGCAGATATGCTAACAATTATGGCTTTTTTTGCGGGAAAACAA
TTATAGCTTGCCACTTGTGAATGGGCCAG-------AGTTTTCTAATGATGCATTT-TAGATATAAAATCTGGTTACTGT
AGCAGGAAATTCAGGGTTGATTACCCTGTTTGTTACTTACCTCGAGGATATAAACATAGCATGAAATCAGAACTTTATTT
CCAAGAT--ATGTTTTATTTCCTCTTAAAGCTTGGGTACTGTTTTACCGAGACAGATAAGTGT-CACTAGAATTATTATC
AT------------------------------------------------------------------------------
-CAAGGTTGCTGTTTCTATTCTAATAACAAATAAATATTTTCAGTTAGGTATGACTTCATATGTATCTTTAAAAGGATGC
TCCTGAACAAATTGGAACTATGTATGCAGAAAATACATGTATACATTAGCATGTTTCTGTTCACCTGACCTTTTTTTGCC
CCTGCAGTGCAAAAGGACATACAGCTCGCGAGGCGTATCGGGGGGAGAAGGCCTTGGTGATACTAATGGAAGATGTTTTC
TGCATCATAGGGAGCAAAGACTGGTGATTTGGTGGTACTAATGGTAGATGTTTTCTGTATTAGGGGTGCAATGCAAAGGC
GCTGATGGTAGTGGCCCAGTATGTTTGTGAGTGTATCGTTAGGAAGTAATGTAGGTGTATTTTCATTTAGTTAGCA--TG
TCTTCGAAGTTGATCTGGTTCATTGCATGGTTGGGATCATCTGACCTCCCTGCTTTGCTCCATTTGAATTGATCTAATTC
AGACAGCGTTTCTGCGAACATCCGAGGATATGGGTTGTCAAATGGCATGAAACTGTTGTGGATTTATGTACAAATGTTTG
AAACTGTTTGCTGTAACCTAATCATTGCACTCTAAAAACTGCCTTCAATTCCCCCAACAGTCATCACTACCACAAAGAAA
-AGTGAGTTTGATTTT---TTTTTCTTGCTGAACTGCCTGAGATCAGCATGGGCTTGTGTCATCAGGAAGTTCAGGCTGG
TGCTAGAATACAGCCTCCAAGATCACTCTCCAGATATTGTAAACACAACCATGCTGATGGTCACCTGAGATAGCCGGGGC
GGGTATGCCTATGGTATCACAGAATGCTTTTGAAT------TATGGTAGTAATTGCCTGAGAGA--------CAGGGCTT
CACAGGAAAGTAACAATTGAAGAGATGATTTTTAGCCCCTCAAATTTCATCACTACTCATGAAAAATAGGCAGGTCCACA
TTCCCATATGTACATGCGATGATATTT-TTTCCCACTTTTATTACATTATCAAAACAATTATTGTAACGGCATGGGATGG
CAAATGTGTAAATGAGACTAATGAAATGGTGGCATATGTGTGATCAATGAAAAG-GAGGGAAGAATCTGCATTGACTTTG
AAACTAGTGGCTGTCGCTTAAATTTTCTGAGATCTTATATAGTTTGAAAATAAGAAGAAGGAACCAAAAAGAAACGCCTA
GGCACGCCAAGTGATACAATGTCTGAATAGCAGGGACA-------------------GTAGAAATTATTCCAGATAGAAC
GGGAGGAAGAACATGCTAGATGCA----------AGGAAGGAGAAGCACCTTGATAGCTT-GATTTATTTAACATTTTTA
ACAAGAATAATTTTTTGAGGACATGATGCAATTGAGCAAAGCTTTTTATTGTTCTCAGTACTTCCGTCAGATGAAGTGTT
TGTGCAGGTCATTGTATTTCAAAAGTATTGA
>chr3D_1
GTCGCCCACATTCGAAGCAGAAGTGGGGGACTTTCTCGTAGTAGAAGTCAAACCATGTGCCCACCTTATCATCTTTAGAT
CTCTTCAAAGTAAAACCTCGGACTAGCGGTTCATAGACATCAATTTTTGCTCGAACTCGTAACTGGTTTCCCCTTGCAAC
TCCATCCTTGTCCACATCAACTCTCACGACTTCTCCCAACCAATTGCCCAAAGCTTTCCCAAACACCTCTGTCCTCTTAT
CCGGTGGAAGATCCGTCACCCTAACCCACATATCCACTCTATCAAACACCATCTCCGAGGGTATCGTTTTTCCTTCATAT
TCCTTCATGATCAAGACACTGAAATCAAATTGCCAAGGCCCATTGTTCATAACATGTCTGTAGTCTTCCTCACTTCCAAA
GTGTACCACAGAAATATTTGAGCCCATGTCCCTGAACTGAGCTTCTTTATGCAGCCCCCACGCCCGAGTCATAGCTTTTT
CTAGTGATGTCTTGTTCATCGGACGAGTGGTACAAGCCTTCCCCACTGCAGACCATCTCGAACTCTTAGGCATCTCTGTC
TCCTGATCTTCAAAGATGAAACCCTCAGCTTCTTTATCCATAAGAACCATGCCTCCCAATCGTGCAGACAAGCTCGACGT
CGGATCCGAGGTCTTGCACTCCAACAGGGATTTTGATTCTTCTCTGTTATTTAGGCCATCCGTCTTGCGCGCCGTCGGTG
TTGCCGCCGCCGTCTTCATTGGTGTAGCCGTCTTGAATCTCCCGGTCGCTGGAGTGGCCGCCGCCGCCTTAGATGTAGTC
GGGTTATTCTTCTTCCCGTCCGCCATCGCCTTATCATCCGCAGTCCCAGCCATGAGCGACAGTCCACAGCAGGGAGAATC
CGTTCTTGGCCCGCGTCTAGGGATGCTCCGTCGCCTCCCTCTCCGCTGCCAGATGCACACCACCCCCGAGCAGCGAAACC
CTAACCCTAGCGTAGGAGCGCAATCGCCTCGCGATCGCCCCCTACCGCCTTAGCGTTTCCTTTTCGTGGTGGACCC----
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>chr1D_1070
TTATGCCA------------------------------------------------------------------------
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----------------------------------------TACCATGCACATTTTCCCCCTCTAGAACTACTCACTTCAT
AATTTATGCCACGCATTGGACGGTGACGGTTGCGAGTCCCCTTGGCCTTGAGCCAGTTGAGTTTCCTAGGCCCGCTACAC
TCCCGTGATAAAGTTACTGGGATACTCCTGCTCAGTAGCACAAGCAGTAGTACTACTGCTCAGTGCACACCACCCAACTC
ACCCACACTTTCCCCGCGGCGATGGGTCGCACGAAGCACGCGGTGGCGGCGACGGCGACGACGACGACGACGGAGACGAA
GAAGCGGCTCCGCTTCGAGCTCTCCCCGCGATGGAGGCCGCCGCCGCCGATGCGCCAGGTACCGCCGGA------GCCGC
AGCCGGAGAAGAAGAAGAAGCGGGCGTACCGGTTCCGGCCGGGCACGGTGGCGCTGCGGGAGGTCAGGAAGTACCAGAAG
TCCACCGGGCCGCTCATCCCCTTCGCGCCCTTCGTCCGCCTGGTGAGTGTGGGTCGGGTACCCCGTACCCGTGCCCTCCT
CCGCCCGCCCCGTCCTCCGATTTGTATCCCTATCACCGATTCAGGATGCGGGCACAGCGTGTGACGGAAGCTTGCTCGTC
TTGTGC-------AAATTTGCAGGTTAAGGAGATCACCAACGACCTCACGAAGGGCGAGCTGAACCA---CTGGACTCCT
CAGGCGCTATTCGCGCTGCAAGAGGTCGGTCAATGGTCAATGCAGAAACCTGCCGTGTACTAGTAGACCTGATGGTTCCC
ATTAAAGAAACCAGCAACTGCAGTAGTTCTGAGAATTGTGAGACAGATAAATTTACCACCATAATTCATAGTTTCTGAAT
CTGAATGCTCCGGTATTAATGCAGTTGATACATCTGTTTAGCAGCATGATTGTTTTTTGGTG---GCCGGTAACTCCAAA
ACCACAATCAAACGTCTTTATGCCATACTAGTTCATAGCTTCTCGTTGTTTGGTCTAAGATAC-----------------
--------------------------------------------------------------------------------
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--------------------------ACACTGTGTCTTGCAACATAATCATGCCAGGAAC-----------GCAAAACTG
AACTA-TTGTTCATATTACATTTTGCTTAAGGGTGTG----ACTGAGAAGTGAGGAAGAGGTAGTCC-------------
----------------------------------AAAAAGAAA--TTGAATTTTATCGTGTGATGGTTATGTGTCCAAAC
G-CC-AAGGATTTATCTGTATCCACTATCCAGTACAACGATACAAGTGC--------------------TTTTAGAACTA
TATACAAGATTGGTAGTGCATGGTAA----ACCAACACAAGTCGCCTCTTGCCAGAAATAATTTCTTCTGCATAACTAGC
AAAATTAACATAGAGTTGACTATATTCCATATG--TGGCCTATCAAATAAGTTGAATGTCCTAATTGTGCTTTCAGTCAC
TGTCCTGTATATTTGCTTTGAGTTTGCACATGATTTTCTTTTCCTTTCCCTCTGCAGGCTGCAGAGTATCACATAGTCGA
TGTATTTGAAAAGGCAAATCTATGTGCCATCCATGCTAAGCGTGTTACCATCAGTAAGTTATCACTGAATGAACACTTCC
TTTCTTTTACAATATTGTGCAAAAGGAAACATGGCAG-------------------------------------TTAT--
-----------------------------------TTGATGTGATATCTAGTTCCGATGTTATTTCAAGCTGCAAGAATT
CAATGATTATTAATGATTAGAAG-ATCCACAATTATCAGATCTCAGCAGCTTATCGTATTTTTTGTTCTC----------
-------------AGTGAACATGTCACAAAAC-AAACAGCAGATACGCTAACAATTATGGCTTTTTT-GCGGGAAAACAA
TTATAGCTTGCCACTTGTGAATGGGCCAGG-------GTTTTCTAATGATGCATTT-TAGATATAAAATCTGGTTACTGT
AGCAGGAAATTCAGGGTTGATTGCCCTGTTTATTACTTACCTCGGGGATATAAACATAGTATAAAATCAGAATGTTACTT
GCAAGAT--ATGTTTTATTTCCTCTTAAAGCTTGGGTACCGTTTTACCGTGACAAATAGGTGT-CACTAGAATTATTATC
A----------------------------------------------------------------------------TCA
ACAAGGTTGTTGTTTCTATTCTAATAACAAATAAATGTTTTCAGTTAGGGATGACTTCTTATGTATCTTTAAAAGGATGC
TCCTGAACAAATTGGAACTATTTATGCAGAAAATACATGGATACATTAGCATGTTTTTGTTCACATGACCTTTTTTTGCC
TCTACAGTGCAAAAGGACATACAGCTCGCGAGGCGTATCGGGGGGAGAAGGCTTTGGTGATACTAATGGAAGATGTTTTC
TGCATCATAGGGATCAAAGACTGGTGATTTGGTGGTACTAATGGTAGATGTTTTCTGTATGAGGGGTGCGATGCAAAGGC
GCTGATGGTAGTGGCCCAGTATGTTTGCGAGTGTATCGGTAGGAAGTAATTTAGGTGTATTTTCATTTAGTTAGCA--TG
TCTTCGAAGTTGATCTGGTTCATTGCATGGTTGGGATCATCTGACCTCTCTGCTTTGCTCCATTTGAATTGATCTAATTC
AGACAGCGTTTCTGCGAACATCCAAGGATATGGGTTGTCAAATGGCATGAAACTGTTGTGGATTTACGCACAAACGTTGG
AAACTGTTTGCTGTAACCTAATCACTGCATTGTAAAAACTGCCTTCAATTTCCCCAACAGTCATCACTACCACCAAGAAA
AAGTGAGTTTGATTTTTTTTTTTTCGTGCTGAACTGCCTGAGATCAGCATGAGCTTGTGTCATCAGGAAGTTCAGGCTGG
TGCTAAAACACAGCCTCCAAGATCACTCTTCAGATACTGTAAACA--ACGATGCTGATGGTCACGTGTGATAGCCGGGGC
GGGTATGCCTATGGTATCACTTAAGGCTTTTAAATTAGGCGTATGGTGGTAATTGCCTGAGAGGCTGAGAGGCAGGACTT
CGCATGAAATTAACAATTGGAGATATGATTTTTAGCCCCTGAAATTTCATCAGTGCCCATGAAA-ATGGGCAGATCCACA
TTGCCATATGTACATGCGATGATATTTG-TTCCCATTTTCATTACATTATGTAAGTACTTATTGTAACCGCACGGAATGG
CAAATGTGTA----------------------------------------------------------------------
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-------------------------------
>chr1B_1110
ACTCA---------------------------------------------------------------------------
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---------------------------------------------------------------------------TTTAC
-ATTTATGCCATGCATTGGACGGTGACGGTTGCGAGTCCCC------------CAGTTCAGTTTCCTAGGCCCGCTACAC
TCCCGTGATAAAGTTACTGTAATACTCCTGCTCAGTACTCGCCTGCCCGCTTTCCCTCG---------------------
------------CCCCCGGCGATGGGTCGCACGAAGCACGCGGTGGCGGCGACG---------------ACGGAGACGAA
GAAGCGGCTCCGCTTCGAGCTATCCCCGCGATGGAGGCCGCCGCCGCCGATGCGCCAGGTACCGCCGGAGCCGCAGCCGC
AGCCGGAGAAGAAGAAGAAGCGGGCGTACCGGTTCCGGCCGGGCACGGTGGCGCTGCGGGAGATCAGGAAGTACCAGAAG
TCCACCGAGCCGCTCATCCCCTTCGCGCCCTTCGTCCGCCTGGTGAGTGTGGGTCGGGTACCCCGTACCCGTGCCCTCCT
CCGCCCGTCCCGTCCTCCGATTTGTATCCC-ATCACCGATTCAGGATGCGGACACAGCGTGTGACGGAAGCTTGCTCGTC
TT-TGC-------AAATTTGCAGGTTAAGGAGATCACCAACGACCTCACGAAGGGAGAGCTGAACCA---CTGGACTCCT
CAGGCGCTCATCTCGTTGCAAGAGGTCGGTCGATGGTCAATGCCGAAACCTGCCGTGTACTATTAGACCTGATGGTTCCC
ATTAAAGAAACCAGCAACTGCGATAGTTCTGAGAATTGCGAGACAGATAAATTTATCACCATAATTCATAGTTCCTGAAT
CTGAATGCTCTGGTATTAATGCAGTTGATACATCTGTTTAGCAGCATGATTGTTTTTTGGTG---GGTAACT----CAAA
ACCAAAATCAAATGTCTTTGTGCCA---TAGTTCATAGCTTCTCGTTGTTTGGTCTAAGATATACTCTCTCCGTCCTTCA
AAGAGTGTACTTCCAACTTTGTTGGAGAGTCAAACTATCTCAAAGTTTGACCGAGTTTGTGCAAAAATATATCAATGTTT
GTGAAACCAAATAGGAGTATGGTGAAAATATATTTTATCATGAATCTAATACTACTAATTTGACAGCATAAATGTTGGTG
TACTATTGTATAAATACAGTGAAAATATATTTTATCATTAATCTAATACTACTAGTTTGACTTTCCAACAAAGTTGGAAG
TACACTCTTTCAAGGACGGAGGGAGTACACTGTGTCTTGCAACATAATCATGCCACGCACATGCGACACACGCAAAACTG
AACTATTTGTTCATATTACATTTTGCTTAAGGATGTG----ACTGAGAAGTGAGGAAGAGGTAGTCC-------------
----------------------------------AAAAA-AAA--CTGATTTTTATCATGTGATGGTTATGTGTCCAAAC
G-CC-AAGGATTTATCTGTATCCACTATCCAGTACAACGACACAAGTGC--------------------TTTTAGAACTA
TA--CAAGATTGCTAGTGCATGGTAA----ACTAACACAAGTCGCCTCTTGCCACAAATAATTTCTTCTGCATAACTAGC
AAAATTAACATAGAGTTGACTATATTCCATATG--TGGCCTATCAAATAAGTTGAATGTCCTAATTGTACTTTCAGTCAC
TGTCCTGTATATTTGCTTTGAGTTTGCACATGATTTTCTTTTCCTTTCCCTCTGCAGGCTGCAGAGTATCACATAGTCGA
TGTATTTGAAGAGGCAAATCTATGTGCCATCCATGCTAAGCGTGTTACCATCAGTAAGTTATCACTGAATGAACACTTCC
TTTCTTTTACAATATTGTGCAAAAGGAAACATGGCAG-------------------------------------TTAT-A
AAGCATTTCAATTTCAGGATCATCTTTGCTTTTATTTGATGTGTTATCTAGTTTCGATGTTGTTTCAAGCTGCAAGAATT
CAATGATTATTAGTGATTAGAAG-ATCCACAGTTATCAGATCTCAGCAGCTTCTCGTATTTTTTGTTCTC----------
-------------AGTGAACATGTCACAAA-C-AAACAGCAGATATGCTAACACTTATGGCCTTTTT-GCGGGAAAACAA
TTATGGCTTG-------TGAATGTGCCAGAGTTTTCAGTTTTCTAATGATGCATTTCTAGATATAAAATCTGGTTACTGT
AGCAGGAAATTCAGGGTTGATTACCCTGTTTATTACTTACCTCGAGGATATAAACATAGTATAAAATCAGAACGTTATTT
GCAAGAT--ATGTTTTATTTCCTCTTAAAGCTTGGGTACTGTTTTACCGTGACAAATAGGTGT-CACTAGAATTATTATC
ATCAAGGTTGTTGTTTCTATTCCAATAACAAATAAATGTTTTCAGTTAGGGACAAATAGGTGTCACTAGAATTATTATCA
TCAAGGTTGTTGTTTCTATTCCAATAACAAATAAATGTTTTCAGTTAGGGATGACTTCATATGTATCTTTAAAAGGATGC
TCCTGAACAAATTGGAACTATTTATGCAGAAAATACATGTATACATTAGAATGTTTCTGTTCACCTGACCTTTTTTTGCC
TCTACAGTGCAAAAGGACATACAGCTTGCGAGGCGTATCGGGGGGAGATGGCTTTGGTGATACTAATGGAAGACGTTTTC
TGCATCATAGGGAGCAAAGACTGGTGATTTGGTGGTACTAATGGTAGATGTTCTGTGTATGAGGGGTGCAATGCAAAGGC
GCTGATGGTAATGGCCCAGTATGTTTGTGAGTGTATCGTTAGGAAGTAATGCAGGTGTATTTTCATTTAGTTAGCA--TG
TCTTCGAAGTTGATCTGGTTCATTGCATGGTTGGGATCATCTGACCTCTCTGCTTTGCTCCATTTGAATTGATCTAATTC
AGACAGCGTTTCTGCGAACATCCAAGGATATGGGTTGTCAAATGGCATGAAACTGTTGTGGATTTACGCACAAACGTTGT
AAACTGTTTGCTGTAACCTAATCACTGCACTGTAAAAACTGCCTTCAATTTCCCCAACAGTCATCACTACCACCAAGAAA
AAGTGAGTTTGAAA-----TTTTTCTTGCTGAACTGCCTGAGATCAGCATGAACTTGTGTCATCAGGAAGTTCAGGCTGG
TGCT---------CCTCCAAGATCACTCTTCAGATATTGTAAACA--ACCATGCTGACGGTCACCTGAGATAGCCGGGGC
GGGTATGCCTATGGTATCACAGAAGGCTTTTGAAT------TATGGTGGTAATTGCCTGAGAGA--------CAGGACTT
CGCAGGAAATTAACAATTGAAGAGATGATTTTTAGCCCCTCAAATTTCATCACTACTCATGAAA-ATAGGCAGATCCACA
TTCCATGTAGTATATGTGATGATATTTTTTTCCCATTTTTGTTACATTATCCAAACACTTATTGTAACCGCACGGGATGG
CAAATGTGTAAATGAGACTAATGAAATGTTGGC--ATGTGTGATCAATGAAAAGTGAGGGAAGAATCTGCATTGACTTTG
AAACTAGTTGCTGTCGCGTAAATTTTCTGATCTCTTATATAGTTTGAA------AAGAAGGAACCAAAGAGAAACGCCTA
GACACACCAAGTGATACAATGTCTGAATAGCAGGGATCTTTTGTTAAACAATGGACGGTAGAAATTATTCCAGATAGAAC
GGGGGGAAGAACATGCTAGGTGCACCTTGCAATGAGGAAGGAGAAGCACCTTGACAGCTTTGATTTATGCAACATTTTTA
ACAAGAATAATCTTTTGAGGAC----------------------------------------------------------
-------------------------------
>chr1B_1287
CTTTCT--------------------------------------------------------------------------
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------------CCCCCGGCGATGGCTCGCACGAAGCACGCGGTGGCGGCGGCGACGGCGC------------------A
GAAGCGGCTCCGCTTCGAGCTCTCCCCTCCATTGAGGCC------------------------GCCGCA------GGCGC
AGCCAGAGAGGAGGGAGAAGAGACCGTACCGGTTCCGGCCAGGGACGGTGGTGCTGCGCGAGATCAGGAGGTACCAGAAA
TCCACCGCGCTGCTCATCCCCCTCGCGCGCTTCGTCCGCCTGGTGAGTAGTGTGGCTTGG--------------------
-----------------------------GTATCAGTGATTCAAGATGCGGAG----------------GCTTCCTCGTC
TTGTGCTGATGATTAATCTGCAGGTTAGGGAGATCACCCAGGACCTCAGTAAGCCGGGAGAGTTTTTACGCTGGACTCCT
CAGGCGCTCGTCGCGCTGCAAGAGGTCGGTCAATGGCCAATGCTGAATCCTGTCGTGTACTAGTATACCTGATGGTTCAA
AACAGCAACCTAC---ACTACACTAGTTCTGAGAATCGTGAGACG-------------CCATAATTCATAGTTTCTGAAT
CTGAATGCTCTAGTATTAATGCAGTTGATACATCTATTTAGCAGCATGATTCTTTTTTGGTGGCTGGTAACT----CAAA
ACCGTAATCAACTGTCTCTGGC---------------GTGTCTCATTGTTTGATCCACGATATA----------------
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--------------------------ACACTGGATCTTACAAAATAATCACGCCACGCAC-----------GCAAAACTG
AACTG-TTGTTCAGATTACATTTTGCTTAAGGGTGTATTTAACTGAGAGGTGAGGAAGATGTGCTGACCAGCGCTGCCTA
AAATTTTGATTCGGGAACAAGATCGTGGGATCCAAAAAA-AAA--GTGAATTTTATCATGTGATGGTTATGTGTCGGAAC
GCCC-AAGGATTAATCTGTATCCACTATCCAGTACAACAACAGAAGTACTTTAGAACCATTCAAGTTTATTTTGCATCTA
TA--CAAGATTATTATTTGCATGATAGACTTAGTTTAA---TCGCCTCTTGCCAGAAATGCCTTCTTCTGCA--------
-----TAACATAGAGTTGACTATATATATTCAGTCTGGCCTATGAAATAAGCTGAATGTCCTAATTGTACTTTCAGTCAC
TGTCATGTGCATTTGCTTTGAATTGACACATGCTTTTCTTTTTCTTCCCCTCTGCAGGCTGCAGAATATGAAATGGTCGA
CCAATTAGAAAGGGCAAATCTCTGTGCCATCCACGCGAAACGTGTTACCATCAGTAAGTTGTCACTGAACGAACATTCCC
CTTCTTTTACAATATTATGCAAAAGGAAACATGGCAG-------------------------------------TTACAA
AAGCATTTCAATTACATGACCATTTTTGCTTTTGTTTGATGTGATATCTAGTTTTGATGCCGTTTCAAGTTGCAAGAATT
C-----TTATGAATGATGATAAGAATCCGCAATTATCAGATCTCAGCAGCTCCTCAC---TTTTGTTGTC----------
-------------AACGAACATGT--CAAA-C-AAAGAGTAGATTTGCTAACAATTATGGCTT-----------------
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>chr1D_2387
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-----------------------------------------------------------CCTAATTGTACTTTCAGTTAC
TGGCCTGTGTATTTGCTTTGAATTGACACATAATTCCCTTTTCCTTTCCCTCTGCAGGCTGCAGAGTATCACCTCGTCGA
CGTATTTGAAAGGGCAAATCACTGTGCCATCCATGCAAAGCGTGTTACCGTCAGTAAGTTCTCACTGAATGAAAACTTCC
TTTCTTTTACAATATTATGCAGAAGGAAACATGCCAG-------------------------------------TTATGA
AAGAGTTTCAATTACAAGATCACCTTTGCTTTCATTTGATGTGGTATCTAGTTTTGATGTTGTTTCAAGGTTCAAGAATT
C-----TAATGATTAATGATAGG-ATCCACAATTGTTATATCTCTGCAGCTCCTCGTATCTGACGAACAAACATGTCAAA
CAATTCATTAAAAAATGAAGATGT--CAAA-C-AAACAGTATATGCAC--------------------------------
-------------------------------------------------TGCATAT-TGGATATCAAACCTGGTTACTAC
AGCAGGAAGTTCAGGGTTGATTATTTCTTATCTGAAGG-----------ATAAACATTGTATCAAATCAGAATTTTATTT
GTAAGTTGCATTTTTTGTTTACTCATAAAACTTGGAAACTGTTTTACTGTGAGAAATAGATGCCCACTAGAATCATGATC
AT------------------------------------------------------------------------------
-CATCATGGCTGTTGCTATTCTAACAAATA----------------------------------------AAACGGATGC
TCCTGAACAAAT-GGAACTATGTATGAAGA-------TGTATGGACTAGCATGTTCCTGTTAACCTGACTTTTTTTTGCT
GCTACAGTGCAAAAGGACATACAGCTCGCGAGGCGTATCGGTGGGAGGAGGCTTTGGTGATACTTCTGGAAGACGTTTTC
TGCATCATAGGGTGGGAAGACTC-------GGTGATAGTAATGGGAGATGTTCTCTGTATTGGGGGTGCA-----AAGGC
AGTGTTGATAGTGGTCCAATATGTTTGACTGTG--TCGTTAGAAAGTATTGTAGGTGTATCTTCATTTAGTTAGCTTTTG
TCTTCGAAGTTGATCTGATTCGTT--------------------------------------------------------
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-------------------------------
>SNPs
----------S--------------------------S------------------------------------------
--------------S--------------------S------------S-------------------------------
--------------------------------------------------------------------------------
----------------------------------S-----S------------------S--S-----------------
---S---------SS-----S--------S------------------------------------S-------------
----------S--------------S------------------------------------------------------
------S---------------------------------------S---------------------------------
-------------------------------------------------------------S------------------
--------S----------------S-----------------------------------SS----S----------S-
----------------------------------SS-S-----S--------------S------------------S--
-S---------------SS-----S--------------------------------SS---S-----S-----------
--------------------------S-----------------------------------------------------
----------------------------------------------------------------------------SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------S-----S-----
------------------------------------------------S----------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S---------------S--S------------------------------
-------------------------------------------------S------------------------------
------------------------------------------------------S---------------------S---
-S------------------------S-S-------------S----S-S-SSSSS-SSSSSSSS---------------
S----------S--------------------------S-----S-S------------S--------------------
--------------------S---------------------------------------------S-------------
--------------------------------------------S--------------------S--------------
--------------S--S-------------------------S----------S-------------------------
-----------------------------------------------------------------S--S-----------
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-------------------------------------SSSSSSSS---------------------------S--S----
----S------------------------------------------------------------------S--------
---------------------------SSS--------------------------------------------------
----------------------S---------------------------------------------------------
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----S--------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
-------------S------------------S----------------------------------S------------
--------------------------------------------------------------------------------
-------------------------------S---------------------------S--S-----------------
S------------------------------------------------S----S---S---------------------
--------------------------------------------------------------------------------
------------------------------------S------------S------------------------------
--------------------------------------------------------------------------------
S--S------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
-----------------------S------------------------------------------S-S-----S---S-
------------------------S------S------------------S----------------------S------
---------------------------------------------------S----------------------------
-----S--S--------------------S---------------SS---------------------------------
------------------------S----------------------S----------------------------S---
-S-------S------------------------------------------------------S--------S------
-----------------------------------S---------------S-----S----------S---S-------
----------------------------S----SS---------------------------------------------
--------S--------S------------SS----------------SSSSSS--------------S-----------
-S---S------------------------------SS------------------------------------------
---S---------------S----------------------------------S-------------SS----------
-----------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_764
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------------------------TAGCCGTCTTTGACCTCCCA------------------------------------
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>reverse_1781
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--------------------GGAGGTCGGTCAATGGTCAA----------------------------------------
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>forward_1064
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----GCCCGGTCTGCTACTATGAC--------------------------------------------------------
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>reverse_2669
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----------------------------ACACTAACACAAGTCGCCTCT-------------------------------
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>forward_1727
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---------------------------AGGAGATCACCGACGACTTG---------------------------------
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>reverse_3761
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CCTGCAGTGCAAAAGGACAT------------------------------------------------------------
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>forward_1740
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-----------------------------------------GACTTGACGAAGGGCGAGA--------------------
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>reverse_4211
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--------------------------------------------------CCCCCAACAGTCATCACTACC---------
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-------------------------------
