>input_sequence_32239
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--------------------------------------------ATGCACATGGCCAGGCCGGCGCTGAAGACGCTCACG
ACCGGGCCACCGGAAGCCAGGGGTGAGTTCATCCGTCTCTGCTCAAGCGGTCGCCTCAAGGATGCCCTCCACCACCCCTT
CCGGGACGTCCTCTGGTCGGAACCTACCCTCTTCGCCCACGTCTTCCGGGCCTGCCGCGCCATCCCGCTCCTCCGCCAAA
TCCACGCCTTTGCCGCCACCTGTGGCGCCGCCGCCGACCGCTTCACCACCAACAACCTCATGCTCGCCTACGCGGACCTC
GGCGACCTCCCCACTGCGTGCAGTCTGTTCGAGAGAATTCCGAAGCCGAACGTCATGTCCTGGAACATTCTGATTGGTGG
TTACATCAAGAACGGCGACCTTGGAAGCGCTCGGAAGCTGTTCGACGAAATGCCCATGAGGAATGTCGCCACCTGGAATG
CCATGGTCGCTGGGCTCACCAATGCAGGGCATGACGAGGACAGCCTGGGGTTCTTCCTTGCCATGCGAAGGGAGGGATTG
CATCCTGATGAGTTTGGCCTTGGGAGCGTGTTCAGGTGCTGTGCCGGGCTCTCTGATCTTGTCTCTGGACGCCAGGTCCA
TGCATATGTCCTGAGGTGTGGGATGGACATTGACATGTGTGTTGGAAACTCGCTGGCTCACATGTACATGCGGTGTGGGT
GCCTCGCAGAAGGAGAGGCCGTTCTCAAAGCGCTTCCTTCTCTTACAGTTGTGTCATTCAATACCACAATCGCTGGTAGG
GCGCAGCATGGAGACTCCGAGGGAGCATTGGAGTATTTTTCCATGATGAGAGGTGTTGGGATAGCGGCTGATGTGGTCAC
ATTCGTTAGTATCATTACCTGTTGCTCAGATTTGGCAGCTCTCGCACAAGGTCAGCAAGTTCACGCACAGGTTATCAAGG
CTGGAGTTGACAAGGTTGTTCCAGTCATTACTTGCCTTGTGCATATGTACTCTCGATGCGGATGCTTGGGTGACTCGGAA
AGAGTTTATTCTGGTTATTGTGGATCAGATCTTTTTCTTCTCAGTGCAATGATCTCAGCTTGTGGGTTCCATGGGCAAGG
ACATAAAGCAGTTGAGCTGTTTAAACAGATGATGAATGCAGGGGCAAGACCTAATGAGGTTACTTTCTTGGCCCTGCTAT
ATGCGTGCAGCCATAGTGGTCTGAAAGATGAAGGCTTGGAGTTCTTTGAGCTTATGACCAAGACTTATGGACTGCAACCA
AGTGTGAAACACTACACTTGTATTGTGGATCTTCTTGGGCGATCAGGTTGTCTGGATGAAGCAGAGGCCCTTATCTTGTC
AATGCCTGTACGTGCTGACGGGGTCATATGGAAGACACTGCTATCTGCTTGTAAGACCCAGAAGAATTTTGACATGGCCG
AGCGGATAGCAGAGCGAGTCATTGAGTTTGACCCTCGAGATTCTGCGCCTTATGTTCTGCTATCAAATATTCGAGCTACC
AGCAGGAGATGGGGAGATGTCAGTGAGTTAAGAAAAAACATGAGGGAGAAGAACGTGAGAAAGGAACCTGGTGTCAGCTG
GGTAGAGCTTAAGGGTCAGGTGCATCAGTTTTGCACAGGAGATAAATCTCATCCAAGACAAGGAGAGATCAATGAGTACT
TGGAAGAAATGATGGCCAAGATCAGGCAATGTGGATATGCACCAGACATGAGCATGGTGTTCCATGATATGGAGGATGAG
GAGAAAGAGGTTAGTTTAACTCACCACAGCGAGAAATTGGCGATAGCATTTGCATTTCTGAGCTTACCTGAAGGAGTTCC
TATCCGAATAATGAAGAATCTACGTGTGTGCGATGACTGCCATGTTGCTATCAAGTTGATGTCCCAGGTCACTGGTCGAG
AGATTGTGGTCAGAGATGTAAGCCGCTTTCACCATTTCAGAGATGGCAAATGCTCCTGTGGAGATTATTGGTGATGAAAG
CACTCAACTGTGTGTATCTTTTCCATTTGCTGCGGGGAACAAGATCTGTATA----------------------------
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-----------------------------------CTTGGTTCATGGAATTTTTG-------------------------
---AAGTCAGCAGGTTTTGGTCTACTCAACTGAGGGATGGGCTATTGAATTGGCTGTTTTGAGTTTCAACTAGTCTGTAC
CAATCCGACCTGTACTCTGGAAATCATAAAATTTGCTGGATCTTTGATCCTCAAAAATAAATGCATTCACTCTGATCCTC
AAAAATAAATCATTGCCTTCTATAAGTGATGGACTAGCATTTTTCGCCCAAGTCTTGGTAGAATTCTGAAGTTCAGGATA
TGCATTTTGTATGAT-----------------------------------------------------------------
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--------------------------ATGAATATTTGTGGACAACTCTGAAATACAAGATTTGGTTTTCTCTACAACTAA
TTATCTGGTTGTCGTTGTCCCATCTTTCATCTCTTGCC-----AATATATATGCCTTTATTAATAATTAAATATCTGCTC
AGGATGGTCATAAAGCTGGATCATGTGTTGCTGGAGCCCTGGAGGTTCTGGTCCTTCTGAGAGTATGA------------
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>chr3D_1_TraesCS3D01G360700
CGACGTCACATATGTAACACGTAATCGTTTTCTGCATCCCTGTGAAACCTAGCCACCACACGTGAGGGAACATGCACCAC
-ATTTGCGCCTCAGAGGGATTCCTCTCCTCCACCGGTTGCTCCCGCAGCTACGGGTTGGAGGGGAACTGTGTGACTTTGT
TTCTGCGCATGTTCAATAGTCTAGTGGCTTAGTTAACTATTCGCCTCGAGTTGTGGCGATGGCGGTGACGAATAAGTCTA
CTCTAGATCTC-------AATTTTAATTCTCTCAGCTATTGGTGTTGAACCTGGTTG-TGGTGTCTGCAATGTCCCGGAC
CCTTTGGATTTGGGCGGGACGCTTGGTGCGTTTTGGTATCAA-----------TGTCGAGGTAATGCTCCTCATCTTCTT
GCTCTTTGTGGTGGTGGTGACGTGGTGTTGAGGGAATCCAATGCCTTCGATGACGGAAGACCAGCCATTTGGGACCGGTT
TGATGTTTCCGCGACCGTTTTTTGTGCTAGCAACGAGGTTGTGGTCTCCTTTTATCTCTTTGGGTGTTTTCTTGATGCGA
CATAATGCTTTGTGACGGTTCATACTTCCTCTTTGTTACAGTGGCGCTCTTCTACTACTGTTGCA-AAGTTGACAATTTT
CATGAGATGGTTCAGGTCGATCTATACAAAAGAC------------------------------TTCTGCATTTACGGCT
TCTTCTTCATAGTGTTGGTCCAGCCGAACATTAGCACCATGACTTCTCAATCGCATATAATACCATAATGTCATGTCGGC
ACCGACAATGAAACGATGGGGACC----GTGCGGCTTCAGCTTATGCTGGATATTGAGTTTTTTTTT-GCTCCTTGTTGT
AATTTTCATG-TTTTTTGACATGTCTTGTATTGTTGAAAGAAAGTTCTTTATACAAATCCATAGGCCTATTGCTACACGT
TCATGTCGTCGAGGTGTTCGACTTGTTGCATTGCCAGTCGCGGT-AACCCAAATTCGCCATGCTTCCGGGGG--------
------------------CGTAGCGCGAGCGGTCGCACGGCCACATGCACATGGCCAGGCCGGCGCTGAAGACGCTCACG
ACCGGGCCACCGGAAGCCAGGGGTGAGTTCATCCGTCTCTGCTCAAGCGGTCGCCTCAAGGATGCCCTCCACCACCCCTT
CCGGGACGTCCTCTGGTCGGAACCTACCCTCTTCGCCCACGTCTTCCGGGCCTGCCGCGCCATCCCGCTCCTCCGCCAAA
TCCACGCCTTTGCCGCCACCTGTGGCGCCGCCGCCGACCGCTTCACCACCAACAACCTCATGCTCGCCTACGCGGACCTC
GGCGACCTCCCCACTGCGTGCAGTCTGTTCGAGAGAATTCCGAAGCCGAACGTCATGTCCTGGAACATTCTGATTGGTGG
TTACATCAAGAACGGCGACCTTGGAAGCGCTCGGAAGCTGTTCGACGAAATGCCCATGAGGAATGTCGCCACCTGGAATG
CCATGGTCGCTGGGCTCACCAATGCAGGGCATGACGAGGACAGCCTGGGGTTCTTCCTTGCCATGCGAAGGGAGGGATTG
CATCCTGATGAGTTTGGCCTTGGGAGCGTGTTCAGGTGCTGTGCCGGGCTCTCTGATCTTGTCTCTGGACGCCAGGTCCA
TGCATATGTCCTGAGGTGTGGGATGGACATTGACATGTGTGTTGGAAACTCGCTGGCTCACATGTACATGCGGTGTGGGT
GCCTCGCAGAAGGAGAGGCCGTTCTCAAAGCGCTTCCTTCTCTTACAGTTGTGTCATTCAATACCACAATCGCTGGTAGG
GCGCAGCATGGAGACTCCGAGGGAGCATTGGAGTATTTTTCCATGATGAGAGGTGTTGGGATAGCGGCTGATGTGGTCAC
ATTCGTTAGTATCATTACCTGTTGCTCAGATTTGGCAGCTCTCGCACAAGGTCAGCAAGTTCACGCACAGGTTATCAAGG
CTGGAGTTGACAAGGTTGTTCCAGTCATTACTTGCCTTGTGCATATGTACTCTCGATGCGGATGCTTGGGTGACTCGGAA
AGAGTTTATTCTGGTTATTGTGGATCAGATCTTTTTCTTCTCAGTGCAATGATCTCAGCTTGTGGGTTCCATGGGCAAGG
ACATAAAGCAGTTGAGCTGTTTAAACAGATGATGAATGCAGGGGCAAGACCTAATGAGGTTACTTTCTTGGCCCTGCTAT
ATGCGTGCAGCCATAGTGGTCTGAAAGATGAAGGCTTGGAGTTCTTTGAGCTTATGACCAAGACTTATGGACTGCAACCA
AGTGTGAAACACTACACTTGTATTGTGGATCTTCTTGGGCGATCAGGTTGTCTGGATGAAGCAGAGGCCCTTATCTTGTC
AATGCCTGTACGTGCTGACGGGGTCATATGGAAGACACTGCTATCTGCTTGTAAGACCCAGAAGAATTTTGACATGGCCG
AGCGGATAGCAGAGCGAGTCATTGAGTTTGACCCTCGAGATTCTGCGCCTTATGTTCTGCTATCAAATATTCGAGCTACC
AGCAGGAGATGGGGAGATGTCAGTGAGTTAAGAAAAAACATGAGGGAGAAGAACGTGAGAAAGGAACCTGGTGTCAGCTG
GGTAGAGCTTAAGGGTCAGGTGCATCAGTTTTGCACAGGAGATAAATCTCATCCAAGACAAGGAGAGATCAATGAGTACT
TGGAAGAAATGATGGCCAAGATCAGGCAATGTGGATATGCACCAGACATGAGCATGGTGTTCCATGATATGGAGGATGAG
GAGAAAGAGGTTAGTTTAACTCACCACAGCGAGAAATTGGCGATAGCATTTGCATTTCTGAGCTTACCTGAAGGAGTTCC
TATCCGAATAATGAAGAATCTACGTGTGTGCGATGACTGCCATGTTGCTATCAAGTTGATGTCCCAGGTCACTGGTCGAG
AGATTGTGGTCAGAGATGTAAGCCGCTTTCACCATTTCAGAGATGGCAAATGCTCCTGTGGAGATTATTGGTGATGAAAG
CACTCAACTGTGTGTATCTTTTCCATTTGCTGCGGGGAACAAGATCTGTATA----------------------------
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-----------------------------------CTTGGTTCATGGAATTTTTG-------------------------
---AAGTCAGCAGGTTTTGGTCTACTCAACTGAGGGATGGGCTATTGAATTGGCTGTTTTGAGTTTCAACTAGTCTGTAC
CAATCCGACCTGTACTCTGGAAATCATAAAATTTGCTGGATCTTTGATCCTCAAAAATAAATGCATTCACTCTGATCCTC
AAAAATAAATCATTGCCTTCTATAAGTGATGGACTAGCATTTTTCGCCCAAGTCTTGGTAGAATTCTGAAGTTCAGGATA
TGCATTTTGTATGAT-----------------------------------------------------------------
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--------------------------ATGAATATTTGTGGACAACTCTGAAATACAAGATTTGGTTTTCTCTACAACTAA
TTATCTGGTTGTCGTTGTCCCATCTTTCATCTCTTGCC-----AATATATATGCCTTTATTAATAATTAAATATCTGCTC
AGGATGGTCATAAAGCTGGATCATGTGTTGCTGGAGCCCTGGAGGTTCTGGTCCTTCTGAGAGTATGACAGTGGAAACTA
TCGGTGCAATTATACATGGAGCAACAATAGTGCAGCGCTACAAAATGGAAGGCAAGTGTCTCTTTTACTTTGTCATGCAA
TAATTCTGATTGGAATGTCAAGTGACATTGTTTTTATTTTTCATTTCGCTGGATGTATATTTTGGTCAATAAGAACAGTG
GCCAGGGTCCACAGGCAGCTGCATATATGCATTGTACAATAGTTCCATTGAATCTCGTTTTGCATTGAAATTAATTTTGG
ATTTTGTCTTTCAATTGGCTGTGCTTGGTTTTGAATAAGATTGATAGTTAAATTTTCTTTTTTGAGGTCATGGCCTTTGT
TTGTACAAATTGACAGCATTGTTTGCAGATTCCTCGGGTTTATTTCTGTTCCCTCTTGTTGCTCATCCATTTGATCTCTT
GATTCACTGGCAATTATGCAGAAAGGTTATTATGCTGCCC--TTTTTTTCTTTTCCTTGTGAGGGTTTCTTTACCTTGGG
AATGGGCTCGTTGAAAGAAGCAACCAAGCCCAATGGCCAATGGGGGTCTTCAGACACACTCAGGTTCTATTCTTTGGCCC
GCAGATTGCTGCCAGATTTTTGTGTCAAGTCATGTCCAGACCTGGCCATATGGACCGTGCTTCTAAGGCGCCGCCCGTGG
GCACGAATTTTTGGCCTGGCACAATACACGAATAAAAGGGCCGGGACGCCATGGAACAAAGCCGATCCCC----------
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---------GAAGCCAAGCCTTAAGGCCAGCCCGGCACGTCCCTTTTATTCATGGGTCGGCACGACACATCTCGGCACGT
GGCGGCATGCGGCCCAAGTTGGCCCAGAAGGCCTTTTTGGCCTTCAAACCTAAAAAACAAAAGGCCTAGAAGGCCGAAGC
GGCTCACAAGGGCTC---AAAAGGAACAAAGGCCGGTCCACAGGCATGCCGG-----GCCGGCCTTGTTCTGGCGTCTGC
CAAGCCGATCCTCGAGCTGAGGCCTTCGGACTGGCACGACAAGACCCTATTATAAAA
>chr3B_2
-GACGCCAACAATGTAACATGTAATCGTTTTCTTTAAACCTATGAAACCTAGCCACCACATGCAAGGGAACATGCACCAC
AATTTGCACCTCAGAGGGATCCAA-CCCTCCATGGGTTGCTCCTGTAGCTACGGGTTGGAGGGGAACCATGTGACTTTGG
TTTTGCACATGTTCAATAGTTCAATGGCTTAGTTAGCTATTCGTCTTCAGCTGTGGCGATGGTGGTGACGAATAAGTTTT
CTCTAGATCTCTTATTAAAATTTTAATTCTCTCAGCTATTGTTGTTAAATTTGGTAGTTGGCGTCTGCAATGTCTCAGGC
CCTTTGGATCTGGGCGGGGCACTTCGTG-----------CACTTTCATATTAGTGTCGGGGTAATGCTCCTATTCTTCTT
GCTCTTTGTGGTGGTGGTGACATGGTGTTAAGGGAATCCAACGCCTTCGATGGTAGAAGGTCAGCCC-TTGGGACGGGTG
GGATGTTTTCGCGGTCGTTTT-TGTGCTGGCAACGAGGTTGTGGTCTCCTTTTATTTCTTTGTGTATTTCCTTGATGTGA
CAGAACGCTTTGTGGCGGTTCATACTTCCACTCCATTATAGTGGTGCTTTCTCTGCCATTGTTCTGAAGTTGGCAATTTT
CGTGAGATGGTTCAGGTTGCTCTACAC-AAAGAC------------------------------TTCTACAATCACGACT
TCTTCTCTGCGGTGTTGGTTCAGGCGAACCTTAGTACTATGACTTCTCAATCGTAGAATAC-----AATGTCATGCCGGG
CTTGACAATGAAACGGTGGGGATCGATGGTGTGCCTTCGACTTATGCTGGAGGTTGAGTTTGTTTTTAGCTCCTTGTTGT
AATTTTCATGGTTTTTTGTCATGTCTTGTATTTTTGAAAG----TTTTCAATACAAATCCA-AGGCCT------------
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>chr3A_3
--ACGCCGCATATGTAACACGTAATCGTTTATTGTATCCCTGTGAAACCTAGCCACCACACGCGAGGGAACATGCACCAC
AATTTGCGCCTAAGAGGGATTCCTCCCCTCCATCGGTTGCTCCCGCAGCTACGGGTTGGAGGGGTACTGTGTGACTTTGT
TTCTGCGCATGTTCAATAGTCTAGTGGCTTAGTTAGATATTCGCCTTCGATTGTGGCGATGGCAATGACGAATAAGTCTA
CTCTAGATCTC-------AATTTCAATTCTCTCAGCTATTGGTGATGAATCTAGTGGTGCTGTCTGCG-ATGTTCCGGGC
CCTTCGAATTTGGGTGGGACGCTTCGTG-----------CAA-----------TGTCAAGGTAATGCTCCTCATCTTCTT
AGGGCC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TGTTCTGAACCCCTCCAGCTT
CACAAAACTTCACATATCCGGCTTCTCAAAGTAGCTTCTCACTCCACCTGGCAAATCCCATCCGTTCTACATCGACCGCA
GCTTCTCCTATCGCCAGATTCGGCTGGCAACCCAGCTG------------------------------------------
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------------------------------------TGGAGACAGTTGGCCTGTTCAGCACCACTTTCGGCCTGCTGAAA
ACCAGCCCAGTTTGGGTTGTTGATCCTGGCTCGTGCGAGGTGGCTCGGGCGTCAATGGCGTCGCCGCGTCGGGTTGGGCT
TCTCCTTCCGG---------------------------------------------------------------------
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------------------------------------------------TGAGCTTGCTGCTCATGGCTAGTGACGAGGGA
ACTACACCGAA---------------------------------------------------------------------
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-----------------------------------GGAACAAGAT---TTGGTGGGAGGAGGCTAGGATGGATTGATCTG
CCAGCGGAGAGATCGCTGGCCGGCGACAAGGGGGAGTCCGGCGTGGCGGCGGACCGGCGGCGCTGAACTGCAGTAGGTTT
TTTTTACGCTTGCAGTAGGGTTACTAGAGGGAGAACTATCGAGGGAAATGGGTGCATATCGATTGGGGAGAGATTTGTTT
TTTCTAGGTGAGGAGGGTACCGATTCGGCTGGGGATGGCTGAACCGTTTTCTTGGCAGTGGCACTCGGCCGTAAATATGG
GCAACTCCTCATTCTTGTTTTCCTGGAGCTGGACTTTTGGTGCTTCACTTTTTTACACTGGAGTCCGGCTAACCTTCTCG
CTTCCAGCTTCTCATAGCTCAGGCGTTCGGGTCGGCTTCCTACGAGGATTTAGTG-------------------------
---AAGTTAGGAGCCGGAGAGATTCAGAACAGGCTCTTACTCTTTGTGGTGGTGGTGATGTGGTGTTGAGGG--------
--------------------------------------------------------------------------------
------AATTCAATGCCTTCGATGACGGAAGGCCAACCATTTTGGGACCGGTTTGATGTTTTCGTGATCATTTTTGTGCT
AGCAACAAGGTTATGGTCTCCTTTTATCTCTCTTGGGTATTTCCTTGATGCCACATGATGCTTTGTGACGGTTCATACTT
CCTCTCTGTTACAGTGGCACTCTTCTGTCACTGTTGTAAAGTTGGCAGTTTTCATAAGATGATTCAGGTTGATCTATACA
AAGACTTCTGCATTTACGGCTTCTTCTCCACAGTGTTGGTCCAGGCTAACATTAGCAACATGACTTCTCAATCGCATAAT
ACCATAGTGTCATGTCGGCACCGACAATGAAACGGTGTGGACAGTGC---------------------------------
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>chr3A_774
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----------------------------GTGCGCCTTCAGCTTATGCTGGATATTCATTTTTTTTTTTGCTCCTTGTTGT
AATTTTCATGTGTTTTTGACATGTCTTGTATTGTTGAAAGAAAGTTTTTTATACAAATCCA-AGGCCTATTGCTACACGT
TCATGTCGTCGAGGTGTTCGACTTGTTGCATTGCCAGTCGCGGTAAACCCAAATTCGCCATGCTTCCGGGGG--------
------------------CGTAGCGCGAGCGGTCGCACGGCCACATGCACATGGCCAGGCCGGCGGTGAAGACGCTCACC
GCCGGGCCACCGGAAGCCAAGGGCGAGTTCATCCGTCTCTGCTCAAGCGGCCGCCTCAAGGATGCCCTCCACCACCCCTT
CCGGAACGTCCTCTGGTCGGACCCTACCCTCTTCGCCCACGTCTGCCGGGCCTGCCGCGCCATCCCGCTCCTCCGCCAGC
TCCACGCCTTTGCCGCCACCTCTGGCGCCGCCGCCGACCGCTTCACCACCAACAACCTCATGCTCGCCTACGCGGACCTC
GGCGACCTCCCCACTGCGTGCAGCCTGTTCGAGAGAATTCCGAAGCTGAACGTCATGTCCTGGAACATTCTGATTGGGGG
TTACATCAAGAACGGCGACCTTGGAAGCGCTCGGAAGCTGTTTGACGAAATGCCCACGAGGAATGTCGCCACCTGGAATG
CCATGGTCGCTGGGCTCACCAATGCAGGGCTTGACGAGGATAGCCTGGGGTTCTTCCTGGCCATGCGAAGGGAGGGATTG
CATCCTGATGAGTTTGGCCTTGGGAGCGTGTTCAGGTGCTGTGCCGGCCTCTCCGATCTTGTCTCTGGGCGCCAGGTCCA
TGCATATGTTGTCAGGTGTGGGATGGACATTGACATGTGTGTTGGGAACTCGTTGGCTCACATGTACATGCGCTGTGGGT
GCCTTGCAGAAGGAGAGGCCGTTCTCAAAGCTCTTCCTTCTCTTACAGTTGTGTCATTCAATACCACAATCGCTGGTAGG
GCGCAGCATGGAGATTCTGAGGGAGCATTGGTGTATTTCTCCATGATGAGAGGTATTGGGCTAGCGGCTGACGTGGTCAC
ATTCGTCAGTATTATTACCTGCTGCTCAGACTTGGCAGCTCTCGCACAAGGTCAGCAAGTTCATGCACAGGTTATCAAGG
CTGGAGTTGACAAGGTTGTTCCAGTCATTACTTGCCTTGTGCATATGTACTCTCGATGTGGATGCTTGGGTGACTCGGAA
AGAGTTTATTCTGGTTATTGTGGATCAGATCTTTTTCTTCTCAGTGCAATGATCTCAGCTTGTGGGTTCCATGGGCAAGG
ACATAAAGCAGTTGAGCTGTTTAAACAGATGATGAATGCAGGGGCAAGACCTAATGAGGTTACTTTCTTGTCCCTGCTAT
ATGCGTGCAGCCATAGTGGTCTTAAAGATGAAGGCTTGGAGTTCTTTGAGCTTATGACCAAGACTTATGGATTGCAACCA
AGTGTGAAACACTACACTTGTATCGTGGATCTTCTTGGGCGATCAGGTTGTCTGGATGAAGCAGAGGCCCTTATCTGTTC
AATGCCTGTACGTGCTGACGGGGTCATATGGAAGACACTGCTATCTGCTTGTAAGACCCAGAAGAATTTTGACATGGCCG
AGCGGATAGCAGAGCGAGTCATTGAGTTTGACCCTCGAGATTCTGCACCTTATGTTCTGCTATCAAATATTCGAGCTACC
AGCAGGAGATGGGGAGATGTCAGTGAGCTAAGGAAAAACATGAGGGAGAAGAACGTGAGAAAGGAACCGGGTGTCAGCTG
GGTAGAGCTTAAGGGTCAGGTGCATCAGTTTTGCACAGGAGATAAATCTCATCCAAGACAAGGAGAGATCGATGAGTACT
TGGAAGAAATGATGGCCAAGATCAGGCAATGTGGATATGCACCAGACATGAGCATGGTGTTCCATGATATGGAGGATGAG
GAGAAAGAGGTTAGTTTAACTCACCACAGCGAGAAATTGGCGATAGCATTTGCGTTTCTGAGTTTACCTGAAGGAGTTTC
TATCCGAATAATGAAGAATCTACGTGTGTGCGATGACTGCCATGTTGCTATCAAGTTGATGTCCCAGGTCACTGGCCGAG
AGATTGTGGTCAGAGATGTAAGCCGCTTTCACCATTTCAGAGATGGCAAATGCTCCTGTGGAGATTATTGGTGATGAGAG
CACTCAACTGTGTGTATCTTTTCCATCTGCTGTGGGGAACAAGATCTGTATA----------------------------
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-----------------------------------CTTGGTTCATGGAATTTTTT-------------------------
---AAGTCAGCAGGTTTTGGTCTACTCAACTGAGGGATGGGCTATTGAATTGGCTGTTTTGAGTTTCAACTAGTCTGTAC
CAATCCGACCTGTACTCTGGAAATCATAAAATTCGCTGGATCTCTGATCCTCAAAAATATATGCATTCACTCTGATTCTC
AAAC--AAATCATTGCCTTCTATAAGTGACGGACTAGCATTTTTCA-----------GTAGAATTCTGAAGTTCAGGATA
TGCATTCTGTATGAT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------ATGAATATTTGTGGACAGCGCTGAAATACAAGATTTGGTTTTCTCTACAACTAA
TTATCTGGTTGTCGTTGTCCCATCTTTCATCTCTTGTC-----AATATATATGCCTTTATTAATAATTAAATATCTGCTC
AGGATGGTCATAAAGCTGGATCATGTGTTCCTGGAG-CCTGGAGGTTCTGATCCTTCTGAGAGCATGACAGTAGAAACTA
TCGGTGCAATTATACCTGGAGCAACAATAGTGCAGCGCTACAAAATGGAAGGCAAGTGTCTCTTTTACTT-GTCATGCAA
TAATTCTGATTGGAATGTCAAGTGACATTGTTTTTTCTTTTCATTTCACTGGATGTATATTTTGGTCAATAAGAACAGTG
GCCAGGGTCCACAGGCAACTGCATATATGCATTGTACAATAGTCCCATTGAATTTCGTTTTGCATTGAAATTAATTTTGG
ATTTTGTCTTTCAATTGGCTGTGCTTGGTTTTGAATAAGATTCATAGTTAGATTTTCTTTTTTGAGGTCATGGCGTTTGT
TTGTACAAATTGACAGCATTGTTTGGAGATTCCTCGGGTTTCTTTCTGTTCCCTCTTGTTGCTCATCCATTTGTTCTCTT
GATTCACTGGCAATTATGCTGAAAGGTTATTATGCTGCTCTTTTTTTTTCTTTTTCTTGTGAGGGTTTCTTTACCTTGGG
AGCGGGCTCGTTGAAAGAAGCAACCAAGCCCAATGGCCAATGGGGGTCTTCAGACACATTCAGGTTCTACTCTTTGGCCC
GCAGATTGCTGCCAGATTTTTGTGTCAAGTCATATCCAGACCTGGCCATATGGACCGTGCTTCTAAGGCGCTGCCCGTGG
GCACGGATTTTTGGCCTGGCACAATACGTGAATAAAAGGGCCGGGACGCCATGGAACAAAGCCGATCCCTGAGGGAGCTC
CTAACACACGCCTGCTTGTATGGGCCAGGCCCACGAACACACAGGTAGTAGCGCGAAAAAAGAAAACTCGGACATAAGTG
GCGCTGCACGTGGAATCGAACTCACAATCAATACCTCCAGTAAGTTGTTGGCCGACCACTCGAGCTACTACAAATATATG
AAACATTGCAGCGCGACGATACATAAGAACAGTAGCTGCGTAGATATTTAAATTATATGAAAACATTTTAGAAAAGCGTG
ATTTCTTTTGACAAAAATGTGTTTTTTTTCTCGGAAGTCCACAGATTTTCGAAAAAATTCATCAATTTTCCAAAAAGTTC
ACAAAAATCTGAAAAGGTTCATCGATTTTTAAAAACTTTCCAGAAAATCTGAAAAAAGTTCATTGATTTTGAACAAAAAC
TTCATCTATTCTCAAAAAGAGCTTATCAATTTTCAAAAAAAATTCATCAATTCTCAAAAAGAGTTTATCAATTGCAGAAA
AGTTCATCGATTTTTAAAAAGTTTACAAAAATCAATTTTGAAAATTAGTTCACAAATTTGAAAAACATTCATCAATTTTG
GAAAAGAGTTCATTGAATTTGAAAAAAACTTCATCGAATTTGAAAAAAGTTCATCGATTTTGGAAAAGAGTTCATCAAAT
TCGAAAAAGCTTCATCAAATTTGAAAAAGAGTTCATCGATTTTGGAAAAAAGTTCATCGAATTCAAGAAAAGTTCATTGA
ATTTGAAAAAATTTCATCAAGTTTGGAAAAAAGTTCATCCAATTCAAAAAAATGTTCATCCAATTCAAAAAAATGTTCAT
CGAATTTGGAACAAAGTTCTTCGATTTCGAAAAACGTTCATCGATTTTGGAAAAGTTCATTAATTTGAAAAGTAGTTTAT
TGAAATGAAGAAAAGAAAAAACAAACAAACAAAACCCTTTCGAATAAACAAGAAAAATGAAAAAAAAAGACATGAGAAGA
AAAGAGTGAAGAAGATAGTTTTGAACACATAAGGTAACGGTGGTGCGGTGGTTAGCGTATGGTGCGAAAGAAGAGGAGGC
CGTGGGTTCGATTTCCACACAACGCATTTGCATTTTTGTTTCTTTACAACAGAAAAAAAGGAACGATGGGCCGGCCCAAG
AAGACGCGTGAAGGAGGGAGAGGTGTGCGCCCTTTGCGCGGTTGCCTGTAGCGGGCACAACGGGCGCCGTTTAGGGAATG
CCGATCCCTGAAGCCAGGCCTTAAGGCCAGCCCGGCACGTCCCTTTTATTCATGGGTCGGCACGACACATCTCGGCACGT
GGCGGCATGCGGCCCAAGTAGGCCCAGAAGGCTTTTTTGGCCTTCAAACCTAAAAAACAAAAGGCCTAGAAGGCCGAAAC
GGCTCACAAGGGCCGAAAAAAATGAACAAAGGCCGGTCCACAGGCATGCCGGACCGTGCCGGCCTTTTTTTGGCGTCTGC
CAAGCCGATCCCGA-------------------------------------------
>chr3B_891
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-------------------------------------------------------------------TATTGGTACACGT
TCATGTCGTCGAGGTGTTCGACTTGTTGCATTGCCAGTCGCGGTAT--CCAAATTCGCCATGCTCCCGGGGCCGCGCAGA
CCACCGCGTCGGCGGTGTCGTAGCGCGAGCGGTCGCACGGCCACATGCGCATGGCCAGGCCGGCGCTGAAGACGCTCACC
ACCGGGCCACCGGAAGCCAAGGGCGAGTTCATCCGTCTCTGCTCAAGCGGCCGCCTCAAGGATGCCCTCCACCACCCCTT
CCGGGACGTCCTCTGGTCGGACCCTACCCTCTTCGCCCACGTCTTCCGGGCCTGCCGCGCCATCCCGCTCCTCCACCAGC
TCCACGCCTTTGCCGCCACCTGTGGCGCCGCCGCCGACCGCTTCACCACCAACAACCTCATGCTCGCCTACGCGGACCTC
GGCGACCTCCCCACTGCGTGCAGTCTGTTCGAGAGAATTCCGAGCCGGAACGTCATGTCCTGGAACATTCTGATTGGGGG
TTACATCAAGAACGGCGACCTTGGAAGCGCTCGGAAGCTGTTCGACGAAATGCCCACGAGGAATGTCGCCACCTGGAATG
CCATGGTCGCTGGGCTCACCAATGCAGGGCTTGACGAGGACAGCTTGGGGTTCTTCCTTGCCATGCGAAGGGAGGGATTG
CATCCTGATGAGTTTGGCCTTGGGAGCGTGTTCAGGTGCTGTGCTGGCCTCTCCGATCTTGTCTCTGGACGCCAGGTCCA
TGCATATGTCGTGAGGTGTGGGATGGACATTGACATGTGTGTTGGGAACTCGTTGGCTCACATGTACATGTGGTCTGGAT
GGCTTGCAGAAGGAGAGGCCGTCCTCAAAGCGCTTCCTTCTCTTACAGTTGTGTCATTCAATACCACAATAGCTGGTAGG
ACGCAGAATGGAGACTCCGAGGGAGCATTGGAGTATTTGTCCATGATGAGAGGTATTGGGCTAGCGGCAGACGTGGTCAC
ATTCGTTAGTATTATTACCTGTTGCTCAGATCTGGCAGCTCTCGCACAAGGTCAGCAAGTTCATGCACAGGTTATCAAGG
CTGGAGTTGACAAGGTTATTCCAGTCATTACTTGCCTTGTGCATATGTACTCTCGATGTGGATGCTTGGGTGACTCGGAA
AGAGTTTATTCTGGTTATTGTGGATTAGATCTTTTTCTTCTCAGTGCAATGATCTCAGCTTGTGGGTTCCATGGGCAAGG
ACATAAAGCAGTTGAGCTGTTTAAACAGATGATGAATGCAGGGGCAAGACCTAATGAGGTTACTTTCTTGGCCCTGCTAT
ATGCGTGCAGCCATAGTGGTCTGAAAGATGAAGGCTTGGAGTTCTTTGAGCTTATGACCAAGACTTATGGGCTGCAACCA
AGTGTGAAACACTACACTTGTATTGTGGATCTTCTCGGGCGATCAGGTTGTCTGGATGAAGCAGAGGCCCTTATCTTGTC
AATGCCTGTACGTGCTGACGGGGTCATATGGAAGACACTGCTATCTGCTTGTAAGACCCAGAAGAATTTTGACATGGCCG
AGCAGATAGCAGAGCGAGTCATTGAGTTTGACCCTCGAGATTCTGCGCCTTATGTTCTGCTATCAAATATTCGAGCTACC
AGCAGGAGATGGGGAGATGTCAGTGAGCTAAGAAAAAACATGAGGGAGAAGAACGTGAGAAAGGAACCTGGTGTCAGCTG
GGTAGAGCTTAAGGGTCAGGTGCATCAGTTTTGCACAGGAGATAAATCTCATCCAAGACAAGGAGAGATCGATGAGTACT
TGGAAGAAATGATGGCCAAGATCAGGCAATGTGGATATGCACCAGACATGAGCATGGTGTTCCATGATATGGAGGATGAG
GAGAAAGAGGTTAGTTTAACTCACCACAGCAAGAAATTGGCGATAGCATTTGCGTTTCTGAGCTTACCTGAAGGAGTTCC
TATCCGAATAATGAAGAATCTACGTGTGTGTGATGACTGCCATGTTGCTATCAAGTTGATGTCCCAGGTCACTGGTCGAG
ACATTGTGGTCAGAGATGTAAGCCGCTTTCACCATTTCAGAGATGGCAAATGCTCCTGTGGAGATTATTGGTGATGAGAG
CACTCAACTGTGTGTATCTTTTCCATCTGCTGTGGGGAACAAGAT---TATA----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------CTTGGTTCATGGAATTTTTGAAGTCAGCAGGTTTTCATGGAGTTT
TTGAAGTCAGCAGGTTTTGGTCTACTCAACTGAGGGATGGGCTATTGAATTGGCTGTTTTGAGTTTCAACTAGTCTGTAC
CAATCCGACCTGTACTCTGGAAAACATAAAATTTGCTGGATCTTTGATCCTCAAAAATAAATGCATTCACTCTGATTCTC
AAAC--AAATCATTGCCTTCTATAAGTGATGGAGTAGCATTTTTCGCCCAAGTCTTGGTAGAATTCTGAAGTTCAGGATA
TGCATTCTGTATGAT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------ATGAATATTTGTGGACAGCACTGAAATATAAGATTTTGTTTTCTCTACAACTAA
TTATCTGGTTGTCGCTGTCCCATCTTTCATCTCTTACCAATATAATATATATGCCCTTATTAATAATTAAATATCTGCTC
AGGATGGTCATAAAGTTGGATCACGTGTTGCTGGAG-CCTGGAGGTTCTGATCCTTCTGAGAGCATGACAGTAGGAACTA
TCGGTGCAATTATACCTGGAGCAACAATGGTGTGGCGCTACAAAATGGAAGGCAAGTGTCTCTTTTACTT-GTCATGCAA
TAATTCTGATTGGAATGTCAAGTGACATTGTTTTTATTTTTCATTTCGCTGGATGTATATTTGGC-CAATAAGAACAGTG
GCCAGGGTCCACAGGCAGCTGCATATATGCATTGTGCAATAGTTCCACTGAATCTCGTTATGCATTGAAATTAATTTTGG
GTTTTGTCTTTCATTTGGCTGTGCTTGGTTTTGTATAAGATTGATAGTTAATTTTTCCTTTTTGAGGTCATGGCGTTTAT
TTGTACAAATTGACAGCATTGTTTGCAGATTCCTCTGGTTTCTTTCTGTTCCCTCTTGCTGCTCATCCATTTGATCTCTT
GATCCACTGGCAATTATGCAGAAAGGGTATTATGCTGCTCTTTTATT---TTTTCCTTGTGAGGGTTTCTTTACCTTGGG
AACGGGCTCGTTGAAAGAAGCAACCAAGCCCGATGGCCAATAGGGGTCTTCAGACACACTCAGGTTCTATTCTTTGGCCC
GCAGATTGCTGTCAGATTTTTGTGT-AAGTCATGTCCAGACCTGGCCATATGGACCATGCTTCTAAGGCGCCGCCCGTGG
GCACGGATTTTTGGCCTGGCACAATACGCGAATAAAAGGGCCGGGACGCCATGGAACAAAGCCGATCCC-----------
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--------TGAAGCCAAGCCTTAAGGCCAGCCCGACACGTCCCTTTTATT-ATGGGTCGGCACGACACATCTCGGCACGT
GGCGGCATGCGGCCCAAGTTGGCCCAGAAGGCTTTTTTGGCCTTCAAACCTAAAAAACAAAAGGCCTAGAAGGCCGAAGC
GGCTCACAAGGGCCC---AAAATGAACAAAGGCCGGTCCACAGGCATGCCGGGCCGTGCCGGCCTTTTTATGGCGTCTGC
CAAGCCGATCCTCGAGCCGAGGCCTTCGGACTGGCACAACATGACCCTATTATAAAA
>SNPs
S----S----------------------------S---------------------------S-----------------
-------------------------S------S-----------------------------------------------
-----------------------------------S----------SS--------------------------------
-------------------------------------------------S-----S-----S----------------S-
------------------------S---SSSSSSSSSSS-----------------------------------------
---------------------S-------S-----------S----------SSS----SS-----SS-------S---S
S-------S----SS------S------S--------------------------S------S--S---S-------S--
--S--S--------S--------------S--SSS---S-----S---S-SSSSSSSS-SS-S-S-------S-------
-------------------S----S-------------------------------------------S----S------
------S-SSS--------S--------------S--S---------------S-S-SS-SSSSSS---------S---S
SSS------------S------S----------S----------------------------------------------
----------------------------------------------S--------------S------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
-------------------S---S--------------------------S-----------------------------
---------------------S--------------------------------------------------------SS
--------------------------------------------------------------------------------
----------------------------------------------S------------------------------S--
--------------------------------------------------------S-----------------------
------------------------------S-------------------------------------------------
-----------------------------------------------S-----S--------------------------
----------S----------------------------------S------S---------------------------
----S---------------------------------------------------------------------------
--------------------------------------S---------------S-----S----------S--------
------------S--------------------------------------------------S----------------
----------------------------------------------------------S---------------------
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---------------------------S----------------------------------------------------
----------------------------------------------------------------------S---------
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-----------------------------------------------------S--------------------------
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-----------------------------------------------------------------------------S--
--------------------------S-----S-----------------------------------------------
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----------------------------------------------------------------------------S---
---SSS--------------------------------------------------------------------------
------S-------------------------------------------------------------------------
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-------------------------------------------S-S----------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------S------------S--------S-------
---------------S------------------------------------------------------S---------
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--------------------------------------------------------------------------S-----
-----------------------------------------S--------------------------------------
--------------------------------------S-----------------------------------------
--S-----------------------------------------------------------------------------
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-----S---------------------S-----------------------------------------S----------
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--------------------------------S-----------------------------------------------
-------------S--------S-------------------------------------------S--S----------
-----------------S-------------------S---S---------------
>forward_461
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-----------------------------------------TGCCTTCGATGACGGAAGAC-------------------
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>reverse_1895
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------------------------------------------------------GTTGGGATAGCGGCTGATGT------
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>forward_468
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------------------------------------------------GATGACGGAAGACCAGCCAT------------
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>reverse_1901
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------------------------------------------------------------ATAGCGGCTGATGTGGTCAC
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>forward_476
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--------------------------------------------------------AAGACCAGCCATTTGGGACC----
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>reverse_1984
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---------------------------------------------------------------CGCACAGGTTATCAAGG
CTG-----------------------------------------------------------------------------
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>forward_1912
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----------------------------------------------------GTGTTGGGATAGCGGCTGAT--------
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>reverse_4197
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------------------------------------CCCTGGAGGTTCTGGTCCTT------------------------
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>forward_1984
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-------------------------------------------GCACAAGGTCAGCAAGTTCAC----------------
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>reverse_4256
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---------------ATGGAGCAACAATAGTGCAGC--------------------------------------------
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---------------------------------------------------------
