>input_sequence_32187
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--CTCCTCTCCCTCCTCCTCAGTCCTCTCCAGCCGTCTTCGCCTTCCTCCCGCCCGCCGCGGACGCCTCTG---------
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-----------------CTCTGGAGCTCGTGACCGGAGGATAATGAGCGTGAATCCTGGAGGCTGCTACACCGTATTCAT
CGCCAACAAGAGCTTCTACTTCTGGATCTTCCAAATCTTCAACCGATACGGCCTCCTCTCCACCTGACTCCGTTCCGCCT
CCTGGATTCTAGATCTCTAGTCCTGCCTCGAGTATTTGTGATCGGCAGTTGACGCTACATATATACATACATACACACAG
TTATTAGCTAGTCACAGCGCAAGCTTAAGTAGCATCATCTGCTCCTCCTGG------GTTGGGTTGGGCTGGGTTACTGT
CGGATCGAACTGCCCAAGATATTTGAATTGGCTGCAAGTTTCACACAAGCAAGCAAGCAACGAGCATGGGCACCATGACC
CTGCCGCCCGGCTTCAGGTTCCACCCCACCGACGACGAGCTCGTCGGCTACTACCTCAAGCGGAGGGTCGACAACCTCAA
GATCGAGCTCGAGGTCATCCCCGTCATCGACCTCTACAAGTGCGAGCCATGGGAGTTGCCAGGTACATACATACACA---
TGCATCTTCCATCCGATTCATTCTGTATTT----CAACATGCCACACATTCATTCATGCTTCGACCGACAAAAAAAGT--
GTTCGAGAG----AGTTGAA-----TTTTACCTATGTCAAACCGCATGGTGTTCACCTTTCTTCT-CCCCTGAATAGACA
ATTTATTTGACAAGTAATAATTTGCCATCATCCTCGAATCGCATAATTCTTTTAGAAAAAGAATCTGCCCTCCAAATTGC
TTGCTAGCTAGCCAGCATACATGAAAAGGGACTTTGTGAAAGAGGCATCTCGCCTCATATATTCTCCATAACTTAGGCCG
GTTGCAGATGAGTCATTTTCCCGCCTTTTTCCCAAAGAAACTTGTTCTCCAAATCACCACA-------------------
--GCCACCCCTCTCAATTTTGGAATATTCTCAGCAGCCAATCACAGTAATCAGCACACTGTTAACTCTGGCAT----AAC
CTTCTCTGCACTCAACTGTAC------------------------ATAGCTAGTTTGTACAGTGGCCAATGTGAATGAGA
ATGCTGAGATTCAGAGGTGTGTGCGTTTGATGATTCTTCAGAGAAGTCGTTCCTGCCCAAGAGGGACCTGGAGTGGTTCT
TCTTCGTGCCGCGGGACCGCAAGTACCCCAACGGGTCGCGCACCAACCGGGCCACCACCACGGGCTACTGGAAGGCCACC
GGCAAGGACCGCAAGGTGTCGTGCGACGGCGGCGCCGTGTGCGGCGTCAGGAAGACGCTGGTGTTCTACAAGGGCCGGGC
CCCCGGCGGCGAGCGCACCGACTGGGTGATGCACGAGTACCGCCTCTGCCAGGACCTCCTCCACGGCGCCTCCAACTTCA
TCGGCGCCTACGCGCTCTGCCGCGTCATCAAGCGCACCGAGGCCGGCCTCCTCCACGGCGACGCGGCCGCCAAGGCGAGG
CCGGGCCACCGGCAGATGAGCAAGGTCGGGAGCAGCTCGTCGCTGGTCACCACGGACCAGCAGCTGGGCTCCCTCACGCC
CAGCCCGCCGCGCCTCGACATCGTCGGCAACGCCTTCCAGCTCCACAGCTCCCCCTCTCCCCTGTACGGAGGAGGAGGGG
AGGTGGTGTCCGGCATGGGCACGCCTCTGGGGTTCCCGCAGCAGGACGCCGCCGCCACATTCTTCATCGACGGCGACTTC
GCCGGCGCAGGCGAGACGACGCAGTCGCACATGCCCTTCTTCGGCGACATGGGCGTGGTCTCGGACCACGAGCTCAGATG
GGACACCTTGCCGCCCTGCGCCAACAGCACCTTCTCCACCACCGCCGGTACGCGCACTGATGCTCTGCCTCACGAGCTCG
ATCAATTCTTGAATCCCCCGTCGCCATTTCGCGCGAGTTCTCAATGCATAT-----GCATGTCCTTCTGCAGGCGCGGCG
GAGCTGTGGAACCCGGCGGCACCGAACGCCGCCGCCCCGATGCTGTGCAGGGAGGCGAGCGACGACCTGGCGGCGTTTTT
CTCGTCCTTGGACGAGAACAACATGGTGGTCTACTGAAGCTCTCGTTTCACACCCAAGAAAAGATCGTAGTAATTTCGGC
AACAGAGGAAATAATTCCAGAAACCTAATTGCTCTCGGCAACGGCGGTATATTTTCAGCCAGTGTACGGGGTCGTATACC
GTATGATATGTAAGAGTACGTAGTATTGCTACGCGCGCGTGTGTGTGTGTGTCTTGTACAGTTGTACTCGGAGTGACGGC
CTATTTTAGCACTGTCTTCTCTCGCTGTGGCACGACACTTCCATCTCTTCCTTTACTGTGATTCAGTCTCTGTACTAGCT
GCTGCTGCTGCTGCAATTTACGCAGCA----ATATGTTGTGCTCCCATTTCGGGCGATGTAAAATTCCCCATTGCTCTTA
TACAAT------------ATATAACCTTCTTTAGAAA-TGGAGG------------------------------------
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>chr1A_1_TraesCS1A01G190100
GCGGGCGGCAGCAGAGCACCACCTGGGCGCGCGGGGGCCGGGAGGAGCCCCTGGCGTGGGAGAGGAGCGCGGGGGTGGAG
GGCAGGTGGCGGAGCCGCGGAGGCGGAGGTGGAGTGCCGGGGCGGAGGTGGAGGGCGGGTGGCAGAGCCGCGGAGGCGGA
GGTGGAGTGCCGGGGCGGAGGCGGAGGTGGAAGACGCTGAGGAAGATGACGGACAGATTCAAAGTTTGAACTGGGGGCAT
AAAGGTCCATTTGCCCATTTTCACCTGGTCGGAACATATTCCCCAGCGACATACATTTCGGAACAGAGGGAGTATGTCGC
ATGTCACTGGGCAAGAGAATCCTGCATC--ACCACTAATTAACTCTAGGACCGGAAGTAGAAGAAGCTCGTGTAATGTTC
CTGCGGAGATGGGATTCGTGTAAAACAGACACGCTCACGACGACGACACGAGTATGAACACATGAGCTGGAAAACAGAGT
GGCGGTAAGTCCTGGGAGCCTACCTGAATTCCGAAAACCGGTACGCGGCCGAGGATGAT---AAACTTAATTAATCAACT
TAAGCCAAGGGGGCTAAGCACGGATCTTGGTGACAGCGGAATGAACCCATATTCAAAACCAAAGCCCATATGA----AAA
CAAAACTGCACTTTCGAACCTCCGCCCGCCGCCGCCGCTGCTGCGCCTCAGGGTTCAGAAAGAAATGAA-----------
--------TAACGCATCCTGATCATCGCGTCGCCACGATACGCCCTGCACACGGAACGGAACGGCCAGGCACG-TTTGGT
TAGTGGTGAATTGCCCAAGCAAGCCGCGAAAGAAAACGAAACGGGAAAAGAAGTGCGGATTGCGAGACGGTTTGGCGGCG
GCTTGGGCGCGCGACAAGCGCCGGCGGGGGTTTTGGAATGGCGTGCGCCCGACCACCTTCTCACCGCCTCTCCACCCTTT
TCCCGTTGGCTTCTCCTCCTCGTCCTCTATATAAACGGCACCATGCCCGTCACTTCATCCCTCCCCAA------------
-CCTCCTCTCCCTCCTCCTCAGTCCTCTCCAGCCGTCTTCGCCTTCCTCCCGCCCGCCGCGGACGCCTCTG---------
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-----------------CTCTGGAGCTCGTGACCGGAGGATAATGAGCGTGAATCCTGGAGGCTGCTACACCGTATTCAT
CGCCAACAAGAGCTTCTACTTCTGGATCTTCCAAATCTTCAACCGATACGGCCTCCTCTCCACCTGACTCCGTTCCGCCT
CCTGGATTCTAGATCTCTAGTCCTGCCTCGAGTATTTGTGATCGGCAGTTGACGCTACATATATACATACATACACACAG
TTATTAGCTAGTCACAGCGCAAGCTTAAGTAGCATCATCTGCTCCTCCTGG------GTTGGGTTGGGCTGGGTTACTGT
CGGATCGAACTGCCCAAGATATTTGAATTGGCTGCAAGTTTCACACAAGCAAGCAAGCAACGAGCATGGGCACCATGACC
CTGCCGCCCGGCTTCAGGTTCCACCCCACCGACGACGAGCTCGTCGGCTACTACCTCAAGCGGAGGGTCGACAACCTCAA
GATCGAGCTCGAGGTCATCCCCGTCATCGACCTCTACAAGTGCGAGCCATGGGAGTTGCCAGGTACATACATACACA---
TGCATCTTCCATCCGATTCATTCTGTATTT----CAACATGCCACACATTCATTCATGCTTCGACCGACAAAAAAAGT--
GTTCGAGAG----AGTTGAA-----TTTTACCTATGTCAAACCGCATGGTGTTCACCTTTCTTCT-CCCCTGAATAGACA
ATTTATTTGACAAGTAATAATTTGCCATCATCCTCGAATCGCATAATTCTTTTAGAAAAAGAATCTGCCCTCCAAATTGC
TTGCTAGCTAGCCAGCATACATGAAAAGGGACTTTGTGAAAGAGGCATCTCGCCTCATATATTCTCCATAACTTAGGCCG
GTTGCAGATGAGTCATTTTCCCGCCTTTTTCCCAAAGAAACTTGTTCTCCAAATCACCACA-------------------
--GCCACCCCTCTCAATTTTGGAATATTCTCAGCAGCCAATCACAGTAATCAGCACACTGTTAACTCTGGCAT----AAC
CTTCTCTGCACTCAACTGTAC------------------------ATAGCTAGTTTGTACAGTGGCCAATGTGAATGAGA
ATGCTGAGATTCAGAGGTGTGTGCGTTTGATGATTCTTCAGAGAAGTCGTTCCTGCCCAAGAGGGACCTGGAGTGGTTCT
TCTTCGTGCCGCGGGACCGCAAGTACCCCAACGGGTCGCGCACCAACCGGGCCACCACCACGGGCTACTGGAAGGCCACC
GGCAAGGACCGCAAGGTGTCGTGCGACGGCGGCGCCGTGTGCGGCGTCAGGAAGACGCTGGTGTTCTACAAGGGCCGGGC
CCCCGGCGGCGAGCGCACCGACTGGGTGATGCACGAGTACCGCCTCTGCCAGGACCTCCTCCACGGCGCCTCCAACTTCA
TCGGCGCCTACGCGCTCTGCCGCGTCATCAAGCGCACCGAGGCCGGCCTCCTCCACGGCGACGCGGCCGCCAAGGCGAGG
CCGGGCCACCGGCAGATGAGCAAGGTCGGGAGCAGCTCGTCGCTGGTCACCACGGACCAGCAGCTGGGCTCCCTCACGCC
CAGCCCGCCGCGCCTCGACATCGTCGGCAACGCCTTCCAGCTCCACAGCTCCCCCTCTCCCCTGTACGGAGGAGGAGGGG
AGGTGGTGTCCGGCATGGGCACGCCTCTGGGGTTCCCGCAGCAGGACGCCGCCGCCACATTCTTCATCGACGGCGACTTC
GCCGGCGCAGGCGAGACGACGCAGTCGCACATGCCCTTCTTCGGCGACATGGGCGTGGTCTCGGACCACGAGCTCAGATG
GGACACCTTGCCGCCCTGCGCCAACAGCACCTTCTCCACCACCGCCGGTACGCGCACTGATGCTCTGCCTCACGAGCTCG
ATCAATTCTTGAATCCCCCGTCGCCATTTCGCGCGAGTTCTCAATGCATAT-----GCATGTCCTTCTGCAGGCGCGGCG
GAGCTGTGGAACCCGGCGGCACCGAACGCCGCCGCCCCGATGCTGTGCAGGGAGGCGAGCGACGACCTGGCGGCGTTTTT
CTCGTCCTTGGACGAGAACAACATGGTGGTCTACTGAAGCTCTCGTTTCACACCCAAGAAAAGATCGTAGTAATTTCGGC
AACAGAGGAAATAATTCCAGAAACCTAATTGCTCTCGGCAACGGCGGTATATTTTCAGCCAGTGTACGGGGTCGTATACC
GTATGATATGTAAGAGTACGTAGTATTGCTACGCGCGCGTGTGTGTGTGTGTCTTGTACAGTTGTACTCGGAGTGACGGC
CTATTTTAGCACTGTCTTCTCTCGCTGTGGCACGACACTTCCATCTCTTCCTTTACTGTGATTCAGTCTCTGTACTAGCT
GCTGCTGCTGCTGCAATTTACGCAGCA----ATATGTTGTGCTCCCATTTCGGGCGATGTAAAATTCCCCATTGCTCTTA
TACAAT------------ATATAACCTTCTTTAGAAA-TGGAGGATACATCATCATCATCATCATCTATTCTAACA----
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--------------------------------------------------ATTCATGACCCTGTGATTCCTATGTACTCC
CTCCGTTCCGAACTAGTAATTCGGAACGGAGGGACATGTTTGGTTAGGGTTACGTTGAAAGCAAATGGTAACGTAATGAG
GTTACACTACATTGTGGGTGT-----AACGGGGCTTTTGCTACTTTTGTCTGGTTGACTCACGCAACAGGAACAGAGAGA
AGGACTACATGCATGTCAAAAAAAAAG-------G---------------------------------------------
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----------------------------------------------------------AGAAGGACTACATGG-------
------------------GAAAATGATGAGGTGGATGAAAGAGAAACTTGAAAGAAAAAAACTTTGCATTCTCTTTTTCT
TTGGTGAAAATAGAAATAAAGATTAAGAGATGATCTCTTAGCAACAATACCTCTCACCATACATTTAATCATAGTATTTG
AT---TACTAGAGATAAAGATTAAGAGATACTATCTCTTTACTA--AGATAAAAACGTTTTATATTTAGAAGCAGAACTA
TCGTGGAAAATATATTAGAAGCAGAACTATCGTGAAAAATTTACCATCTCTAAATTATCGTCGAAAATTGATACGACTTT
CTTATCAATCACTGCACATGCCCTAACAACCAGGAGCGGGTGTGATCGATTCTGTATAGCACTGTAAT---TGGATTACA
CAGCTTCTGATTCCAGCCCGACTCAATCAACCAAACCAAACGCAGGTAACGGTTTTGGATGGCGCTGTAATC-AGGTCCG
GCAAACACATCCATGGTACTGTATATATGCATGGAATTT-----------------------CTGCACAAAATTGTTACA
ATAACTGCAAAGGAATCCTGACTCCT------------------------------------------------------
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---------------------------------GACAGGGAGGATGCGAATATCAGTTTCCTGTAGAAGGCAAAACAGAA
ACGGCTTGGACCAGAGTGGTGTGCATCTGATGGCGTGGCGGTGACTTAGCATGGCATGAAGTCTGACTAAAGTGCAACCG
AAGGGGGGAGAAAAGAAAAGAGCCAGGAATGATTGACAGGAAGCACATATGCCCTGTGCTGGACGAGGAAATGTGGC
>chr1B_313
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------------------------------------------------------------------------TATGTTGC
ATGTCACTGGGCAAGAGAATCCTGCATCCCACCACTAATTAACTCTGGGACCGGAAGTATAACACGCTGG----------
-TGCTGAGATGTGATTCGTGTAAAACCGACACGCTC---ACGACGACACGAGTATGAACACATGAGGTGGAAAACAGAGT
GGCGGTAAGTTCTGGGAGCCTACCTGAATTCTGAAAACCGGTACGCGGCCGAGGATGAT---AAACTTAATTAATCAACT
GAACCGTAGGGGGCTAAGCACGGATCTTGGTGACAGCGGAATGAACCCATATTCAAAACGAAAGCCCATATGA----AAA
CAAAACTGCACTTTCGAACCTCCG----CCGCCGCTGCTGCTGCGTCCCAGGGTTCAGAAAAAAAAACACGGAAGAGGAA
GAAATGAATAACGCATCATGATCA-----TCACCACGATACGCTTTGTACACGGAATGAACACA-----CACG-TTTGGT
TAGTGGTTAATTGCCCG----AGCCGCGAAAGAAAACGAAACGGGAAAAGAAGTGCGGATTGCGAGACGGTTTGGCGGCT
GCTTGCGGGCGCGACAAGCGCCGGCGGGGGTTTTGGAATGGCGTGCGTCGGACCACCTTCTCACCGCCTCTCGACCCTTT
TCCCGTTGGC---TCCTCCTCCTCCTCTATATAAACGGCACCATGCCCGTCACTTCATCCCTCCCCAA------------
-CCTCCTCTCCCTCCTCCTCACTCCTCTCCAGCCGTCTTCGCCTTCCTCCCGCCGCCA----ACGTCTCTG---------
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-----------------CTCTGGAGCTCGTGACCGGAGGATAATGAGCGTGAATCCTGGAGGCTGCTACACCGTATTCAT
CGCCAACAAGAGCTTCTACTTCTGGATCTTCCAAATCTTCAACCGATACGGCCTCCTCTCCACCTGACTCCATTCCTTCA
CCTGGATTCTAGATTTCTAGTCCTGCCTCAAGTATTTGTGA-CGGCAGTTGACGCTATATATATACATACATACAC----
TTATTAGCTAGTCACAGCGCAAGCTTAAG---CATCATCTGCTCCTCCTGG------GTTGGG-----CTGGGTTACTGT
TGGATCGAACTGTCCAAGATATTTGAATTGGCTGCAAGTTTCACACAAGCAAGCAA----CGGGCATGGGCACCATGACT
CTGCCGCCCGGCTTCAGGTTCCACCCCACAGACGACGAGCTCGTCGGCTACTACCTCAAGCGGAGGGTCGACAACCTCAA
GATCGAGCTCGAGGTCATCCCCGTCATCGACCTATACAAGTGCGAGCCATGGGAGTTGCCAGG----TACATACACA---
TGCATCTTCTATGCGATTCATTCTGTATTTCAACCAACATGCCACACATTCATTCATGCTTCGACTGACAAAAAAAGTGT
GTGCGAGCG----AGTTGAATTCCCTTTTAGCTATGTCAAACCGCATGGTGTTTACCTTTCTTTCCCCCCTGAATAGACA
ATTTATTTGATAAGTAATAATTTG---TCACCCTCGAATAGCATAATTCTTTTAGAAAAAGAATCTGCCCTCCAAATTGC
TTGCTAGCTAGCCAGCATACATGAAAAGGGACTTTGTGAAAGAGGCATCTCGCCTCATATATTCTCCATAACTTAGGCCG
GTTGCAGATGAGTCATTTTCCCGCCTTTT-CCCAAAGAAACTTGTTCGCCAAATCACCACA-------------------
--GTCACCCCTCTCAATTTTGGAATATTCTCAACGGCCAATTACAGTAATCAGTACACAGTTAATTCTGGCAT----AAC
CTTCTGTGCACTCAACTGTACATAGCTACTACTTCTAAAAAAAACATAGCTAGTTTGTACAGTGACCAATGTGAATGAGA
ATGCTAAGATTCAGAGCTGTGTGCGTTTGATCATTCTTCAGAGAAGTCGTTCCTGCCCAAGAGGGACCTGGAGTGGTTCT
TCTTCGTGCCGCGGGACCGCAAGTACCCCAACGGGTCGCGGACCAACCGGGCCACCACCACGGGGTACTGGAAGGCCACC
GGCAAGGACCGCAAGGTGTCGTGCGACGGCGGCGCCGTCTGCGGCGTCAGGAAGACGCTGGTGTTCTACAAGGGCCGGGC
CCCCGGCGGCGAGCGCACCGACTGGGTCATGCACGAGTACCGCCTCTGCCAGGACCTCCTCCACGGCGCCTCCAACTTCA
TCGGCGCCTACGCGCTCTGCCGCGTCATCAAGCGCACCGAGGCCGGCCTCCTGCACGGCGACGCGGTTGCCAAGGCCAAG
CCGGGCCACCAGCAGATGACCAAGGTTGGGAGCAGCTCCTCCCTGGTCACCACGGACCAGCAGCTGAGCTCCCTCACGCC
CAGCCCTCCGCGCCTCGACATCGTCGGCAACGCCTTCCAGCTTCACAGCTCCCCCTCTCCCCTGTAC------GGAGGGG
AGGTGATGTCCGGCATGGGTGCGCCCCTGGGGTTCCCGCAGCAGGACGCCGCCGGCACATTCTTCATCGACGGCGACCTC
GCCGGCGCAGGCGAGACGACGCAGGCGCACATGCCTTTCTTCGACGACATGGGCGTGGTCTCGGACCACGAGCTCAGATG
GGACACCTTGCCGCTCTGCACTAACAACACCTTCTCCTCCACCGCCGGTACGTGCACTGCTCTGC---TTCACGAGCTCG
ATCAATTCTTGAATCCTCCGTCGCCATT-CGCGCGAGTTCTCAATGCATAT-----GCATGTCCTTCTGCAGGCGCGGCG
GAGCTTTGGAACCCGGCGGCACCGAACGCCGCCGCCCCGATGCTGTGCAGGGAGGCGAGCGACGACCTGGCGGCGTTTTT
CTCGTCCTTGGACGAAAACAACATGGTGGTCTACTGAAGCTCAGATTTCACAACCAAGATCGTG--GTAGTAATTTCGGC
AACAGAGGAAATAATTCCAGAAACCTAATTGCTCTCGGCAACGGCGGTATATTTTTAGCCAGTGTAC-GGGTCGTATACC
GTA---TGTGTAAGCGTACGTAGTACTGTGTGTCA-----GTGTGTGTGTGTCTT--------GTACTCGGAGTGACGGC
CTATTTTAGCACTGTCTTCTCACGCTGTGGCACGACACTTCCTTC----TCTTTACTGTGACTCAGTCTCTGTACTAGCT
GCTG----------------------A----ATATGTTGTGCTCCCATTTCGGG-GATGTAAAATTCCCCATTGCTATTA
TACAAT------------AGTATAAAATTCCC--------------------------CATTGATTGATGCAGAGGGTCA
TGAATTGTTATTTTTTCAAACGCAAGTTTTATTCATTTGAAATAACCATTACATCATTTACGAGGATTGGTACGATTTCA
TTTAAAGGCTCTCAAACCAAATAAAAGTTAAAGAGAACCTAGCCAACCTAGCAAGCTCATGAGCAACTTTATTTGCTTCT
CTATTACAATGCTCGAATCTAGAAATAAGGAAATCACAAGCAAAATGGAAACATTCATGAAAAAATTACCGCCGCCACAC
TTGTCAATCGTCCTTCATCCTTCATTATATCAATCATCTTCAGATTGTCGAGTTAATAACAAGGTGATTGCAACCCGCCC
TTTGCTCAAGTGATAGACCAAATCCAAGGGCCGAAGCTTCAGCCGTCAGGACATCTGCGCACCAGTCATAACCCCCTCCC
CCCCTTCTCCTCCCAACCTCAGCGAATTTGCCTTTATCATCCTTCATTTGATTCATGACCGTGTGATTCCTAT-------
-------------------------------GGGCATGTTTGGTTAGGGTTTCGTT-AACGCAAATAGTAACGTAATGAG
GTTACACCACATTGTGGATGT-----AACAGGACTTTTGCTAGTTTTGTTTGGTTGACTCAGGTAAC-GGAACAGGGAGA
AGGCATACGATCGAAGAGATAGGAAAAAAAACTATAAGTAGGGTTGCTCAGAGAGATCACCATGGACACCAAGACCTGAG
GTTGCACGCATGGTTTGCGCATAGATTAGTTGCGTAGGGAGCGGCGGCCACTGAGGCGGCTATGGTGTTACGATAGCGCC
AGTGTGGTGGCTGGCATGATAGCGGCACTGTGGTGGCGGCGTCCAAGGCAAAGATGTCGAGTGAGAAGAGGAAAGAAACA
TGAGAGAAAAGTGGGCCGGGATGGAACTGCTTAAGGGCATGTAAAATTGTGTTATTTTAGAAGTGCTACATGGAAAAAAT
GATGAGGTAACCCTCAAAGAAAATGACGAGATGAAGGAATGAGAAACTTAAAAAAAAGTTTTATC---TTCTCTT-----
--------------------GACTAAGAAATGATCTCTTAGCAACAGTATCTCT--------------------------
-----------AGATAATGAGTAATAGATAACATATTAATTATACACCATATTTTAT-----------------------
--------------------------------------------------TAAATTATTGTGGCAAACTTATACGACTCT
CTAATCAACCACCGTACATGCCTTAACGGCCAGG-GCGGCTCTGATCGATTTTGCATAGCACTGTAATAATTGGATTACA
CGGTTTCGGATTCCAGCCAGATTC---------AACCAAAAGCCGGTAGCGGTTTTGGATGGCGGTGTAATCAAGGTCCG
GGCAACACATCCAGAGTA---TATATATGCATGAAATTTCTTAGCATGTGCGCCAAAAAACGCTGCACATAATTGTTACA
ATAACTGC-AAGGAATCCTGACTCTCAGGGAGTATGTTTTTTTGAAAAAAAAAGATGACCCTTGGTCTTTACATCTGGGC
GATGTATACGGTCACTTTACTAATTATTCTCAATAGACCTTACAAAGTCATACAACAGTAAGACTAAAATCGCCGTCTAA
GCAACAAACTGTCGCTACACCTATCCAGTTGATGAAGGGGTGCAGATAGTCTGGGCCTAATACCAAACAAACATCGCAAC
CAAGCCTAACATCTAAGACCTGAGACCCCAACCTAGCCACTTGCCGGGTCTGGGGCACACTCTAGTCCGTCGTGCTCTCA
GAGGCCGCCACCGCCAACTGCCACCGCTCCATCTTCAGAACTGTAGTGATGCATCAACCTTGCTCGGTCTAGCTATCGTC
GACGCCACCACGGCGCCCAACGGCACCTCCCCCCTACGTGCAAACAGCTGAGCACGTCGCGGTCGTCACTGATACATCTC
AGCGCCATGCTGTCAAGTACCACCAGCCGACACAGCTTGAAGTCCTTGGAAGATTTGTCATGCATAGTACCTGTCGACCA
GGCATGACAAAGCGTAGCACCTGTCGGTCAGCCATGACTTGACATATCCATCGAAGCTCCGTGCAAGACGAAGACGCTCC
ACCTCCTGCCTGTGATTTTCAGCGCTGCTCCGCAAACGATGCTCCCAGGAGAAAAACGACACCGCAGTGCCGCCATCGTC
CGGTCTGGAACACCAGATCTAGGGTTTCCCCGGAGCAGCACGAGTGGGTCAACAATAGTTACATGACGATGCCTTCATCA
AGGTAACGGCGAGAACGCCGTCATCGCCTGCCGCCGGCTCGGTTTTCACCGGCAACCATGTCTCCCCTACTCGCAGCCGG
GACAAGATGATGGATCTCGAGATCCGATCACCAAGCCTCTCGCCGGCCATCTCTAGAAGAAGATGACCACCATGTCCACC
AGCGTCACCACGCCGGGCACGCATCGCCGCCGGCACCCCCATGGTGCCTAGAGGCCGACAAGCCCCAACGAACACCACGC
CTCGCCAGCCGCCATGGCCCAGACCCAAGCACCACCAGATTCAGATCGGATCAGGGTCAAGCCGCCGCGGAGGCAGCACC
ACTGGACGGTGCCCTGCCCTCCACCCCGCTGTAGGACCGAGTCATCGCTGGAGCTCCGCCGCGCCACGCCGCCAAGCCGC
AGCCAGAAGAACTCGCCCCGTCGTCAGGGCAGAGAGAGAGACACGCCAGAGAGAGGCCCCGCCGCCGCCGGCACTGCCTG
GGCTTTGCCCGGCTGCGTCCCACGACGACGGTGAGGGGGGAGGGAGGGTGTTTGAGGGCCGGCGACGGAGGGAGCTAGGG
TTCCCCCGAGTCGCCTCAGAGAGGGACGCGGGGGACAGGGAGTATGTGAGTATCAGTTCCC-GTAGAAGGCAAAACAGGA
ACGGCTTGGACCAGAGCGGG--GCATCTGATGGCGTGGCGGTGACTTAGCATGGCATGAAGTCTGACTAAAGTGCAGCCG
AAGGAGGAAGAAAAGAAAAGAGCCAGGCATGATTGACAGGAAGCACATATG-CCTGTGCTGGACGAGGAAATGTGGC
>chr1D_504
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-------------------------GAATTCTGAAAACCGGTACGCGGCTGATGATGATGATAAACTTAGTTAATCAGCT
GAACCGAAGGGGGCTAAGCACGGATCTTGGTGACAGCGGAGTGAACCCATATTCAAAACCAAAGCACGTACAGTATGAAA
CAAAACGGCACTTTCGAACCTTGCCGC-------CGCCTGCCGCGCCTCGCGATTCAGAAGAAGAATAACG---------
----------------------CA-----TCGCCACGATACGCCCTGCACACGGAACGGAACGGCCAGACACGTTTTAGT
TAGTGGTGAATTGCCCGAGCAAGCAGCGAAAGGAAATGAAACGGGAAAAGAAGTGCGGATTGCGGGACGGTTTGGCGGCG
GCTTGCGGGCACGACAAGCGCCGGCGGGGGTTTTGGAATGGCGTGCCTCGGACGACCTTCTCGCCTCGCAAGTCTCAAAC
CCTTTC--------------CCTCCTCTATATAAACGGCACCACGCCCTTCACTTCCTCCCTCCCCAATCCAGCGCCTCC
TCCTCCTCCTCCTCCTCCTC------CTCCGGCCATCCCCGCCTTCCTCCCGCCGCCA----ACATCTCTAGCTAGCTCC
ACCTTCTTACTCACCGTGCGCTTGACCGATCCTCACAATCAATCAAGCTCTTTAGCTAGCGCCCTGTTAGTTGGCCACCA
TTCCTGTTCCATCAAGTCTCTGGAGCTCGTGACCGGAGGATAATGAGCGTGAATCCTGGAGGCTGCTACACCGTATTCAT
CGCCAACAAGAGCTTCTACTTCTGGATCTTCCAAATCTTCAACCGATACGGCCTCCTCTCCACCTGACTCCATTCCTTCA
CCTGGATTCTAGATCTCTAGTCCTGCCTCAAGTATTTGTGATCGGCAGTTGACGCTATATATATACATACATACACACAG
TTATTAGCTAG---------------------CATCATCTGCTCCTCCTGGTCCTGGGTTGGG-----CTGGGTTACTGT
TGGATCGAACTGCCCAAGATATTTGAATTGGCTGCAAGTTTCACACAAGCAAGCAA----CGAGCATGGGCACCATGACT
CTGCCGCCCGGCTTCAGGTTCCACCCCACCGACGACGAGCTCGTCGGCTACTACCTCAAGCGGAGGGTCGACAACCTCAA
GATCGAGCTCGAGGTCATCCCCGTCATCGACCTCTACAAGTGCGAGCCATGGGAGTTGCCAGG----TACATACATAACG
TGCATCTTCTATCCGATTCATTCTGTATTTCAAC----ATGCCACACGTTCATTCATGCTTCGGCCGACAAAAAAAGT--
GTGCGAGAGAGAGAGTTGAA-----TTTTAGCTATGTCAAACCGCATGGTGTTCACCTCTCCTTTCCCCCTGAATAGACA
ATTTATTTGATAAGTAATAATTTGCAATCATCCTCGAATAGCATAATTCTTTTAGAAAAAGAATCTGCCCTCCAAATTGC
TTGCTAGCTAGCCAGCATACACGAAAAGGGACTTTGTGGAAGAGGCATCTCGCCTCATATATTCTCCATAACTTAGGCCG
GTTGCAGATGAGTCATTTTCCCGCCTTTT-CCCAAAGAAACTTGTTCTCCAAATCACCACAAGAAATAAATTAGTAAAGC
CAGTCACCCCTCTCGCTTTTGGAATATTCTCAACAGCCAATTACAGTAATCAGTACGCAGTTAACTCTGGCATTCCTAAC
CTTCTCTGCACTCAACTATACAAACTGG---------------------------------------AATGAGAATGAGA
ATGCTAAGATTCAGAGTTGTGTGTGTTTGATCATTCTTCAGAGAAGTCGTTCCTGCCCAAGAGGGATCTGGAGTGGTTCT
TCTTCGTGCCGCGGGACCGCAAGTACCCCAACGGGTCGCGGACCAACCGGGCCACCACCACGGGGTACTGGAAGGCCACC
GGCAAGGACCGCAAGGTGTCGTGCGACGGCGCCGCCGTGTGCGGCGTCAGGAAGACGCTGGTGTTCTACAAGGGCAGGGC
CCCCGGCGGCGAGCGCACCGACTGGGTCATGCACGAGTACCGCCTCTGCCAGGACCTCCTCCACGGCGCCTCCAACTTCA
TCGGCGCCTACGCGCTCTGCCGCGTCATCAAGCGCACCGAGGCCGGCCTCCTGCACGGCGACGCGGCTGCCAAGGCGAGG
CCGGGCCACCAGCAGATGAGCAAGGTCGGGAGCAGCTCCTCCCTGGTCACCACGGACCAGCAGCTGAGCTCCCTCACGCC
CAGCCCTCCGCGCCTCGACATCGTCGGCAACGCCTTCCAGCTTCACAGCTCCCCCTCTCCCCTGTAC------GGAGGGG
AGGTGGTGTCCGGGATGGGCGCGCCTCTGGGGTTCCCGCAGCAGGACGCCGCCGCCACATTCTTCATCGACGGCGACCTC
GCCGGCGCAGGCGAGACGACGCAGGCGCACATGCCTTTCTTCGACGACATGGGCGTGGTCTCGGACCACGAGCTCAGATG
GGACACCTTGCCGCTCTGCACCAACAACGCCTTCTCCACCACGGCCGGTACGTGCAC---TGCTCTGCTTCACGAGCTCG
ATCAATTCTTGAATCCCCCGTCGCCATTTTGCGCGAGTTCTCAATGCATATCATATGCATGTCCTTCTGCAGGCGCGGCG
GAGCTCTGGAACCCGGTGGCACCGAACGCCGCCGCCCCGATGCTGTGCAGGGAGGCCAGCGACGACCTGGCGGCGTTTTT
CTCGTCCTTGGACGAAAACAACATGGTGGTCTACTGAAGCTCTCGTTTCACACCCAAGAAAAGATCGTAGTAATTTCGGC
AACAGAGGAAATAATTGCAGAAACCTAATTGCTCTCGGCAACGGCGGTATATTTTCAGCCAGTGTAC-GGGTCGTATACC
GTA---TATGTAAGAGTACGTAGTATTGCTACGCATGTGTGTGTGTGTGTGTCTT--------GTACTCGGAGTGACGGC
CTATTTTAGCACTGTCTTCTCTCGCTGTGGCACGACACTTCCATCTCTTTCTTTACTGTGATTCAGTCTCTGTACTAGCT
GCTGCTGCTGCTGCAATTTACGCAGCAATATATATGTTGTGCTCCCATTTCGGGCGATGTAAAATTCCCCATGGCTATTA
ATATTAATATATTATACAATATAACCTTCTTTAGAAAATGGAGGATACATCATCTATGCATTGGTTGATGCACAGGGTCG
TGAATCTCATT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TGATTCCTGT-------
-------------------------------GGACATGTTTGGTTAGGGTTACGTT-AATGCAAACGGTGACGTAATGAG
GTTACACTACATTGTGGATGCAATGCAACGGGACTTTTGCTAGTTTTGTTTGGTTGACTCAGGCAACAGGAACAGAGAGA
AGGACTACATGCTTGTCAAAAAAAAAGAGAGAGAG---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------AGAAGGACTACATGG-------
------------------GAAACTGATGAGGTGGATGAAAGAGAAACTTGAAAAAAG----CTTTGCATTCTCTT-----
--------------------AATTAAGAGATGATCACTTAGCAACAATACCTCTCATCATACATTTACTCATGGTATTTG
ATTACTACTAGAGATAAAGATTAAGAGATACTACCTCTGTTACTAGAGATAAAAATGTCTTATATTTAGAAGCATAACTA
--------------------------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S--
----------------------------------------------S------------S--S-S---S-SSSSSSSSSS
S---S------S--------------S---------SSS---------------------------S-------------
----------S--------------------S------------------------------------------------
S--S-S--------------------------------------------------------------------------
-------------------------S-S-------S-------------------------S---SS-------------
-----------------S------SSSSS---------------------------------------S-----------
----------------S---------------------------------------------------------------
-----S-S---------------------------------------S-S----------------------S-------
----------SSS--------S----------------------------------------------------------
---------------------S--------------------------------SS-SSSSS---S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S----SS-S
-----------------------------S---------------------------S----------------------
-----------------------------SSS-------------------------------SSSSS------------
S-------------------------------------------------------SSSS-------------------S
--------------------------------------------------------------------------------
---------------------------------------------------------------SSSS-------------
---------S----------------------------------------------------------------------
--S---------------------------S--------------------------------S----------------
----------S--------------S-------------S----------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
---S----------------------------S--------S-----------S----S---------------------
----------------------------------------------------------------S---------------
-----S----------S--------------S------------------------------------------------
----------------------------------------S-----------------------S---------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
----------------------------------------------------S--------------S------------
----------S---------------------------S--S------------------------S-------------
------S-----------------------------------S------------------------SSSSSS-------
--------------------S--------------------------------------------------------S--
------------------------S----------S-------S------------------------------------
--------------S----S------S-------------------------S------S--------S-----------
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
---------------S----------------------------------------------------------------
-------------------------------------------------------------------S------------
---SSS----------------------------SS-S-----------------SSSSSSSS-----------------
-------------------------------------------------S------------------------------
----------------------------------------------------------------------------S---
------------------------------------------------------SSSSSSS-S--SS--S-SS-SS----
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------------------------------------------------------------S------------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------S--S--------------------
-----------------S--------------S---------S------S-----------S------------------
------------S-------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S---SSSS--------------SSSSS
SSSSSSSSSSSSSSSSSSSS------------------------------------S----------S----S-------
--------------------------------------S-SS-------------S--S---------------S-----
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S--S-S---S-S--------S-
--S-----S---S-S-------S----SS-----S----S-S---------S--S-------------------------
-S-S---S----------S--S--SSSSSSSSS-------S--S----S---------------S---------------
-SS----------SS---SSS------------S-----------------------------------S----------
--------S---------------SS------------------------------------------------------
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------------------------------------------S---S--S--------S--S----------------S-
----------------S--SSS------------------------------------------------------S---
----S--S-------------------S-----------------------S-------------------------
>forward_273
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-------------CCCATTTTCACCTGGTCGGA-----------------------------------------------
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>reverse_1521
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CGGATCGAACTGCCCAAGAT------------------------------------------------------------
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>forward_1062
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--CTCCTCTCCCTCCTCCTCAG----------------------------------------------------------
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>reverse_3060
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-------------------GCCAACAGCACCTTCTCCA------------------------------------------
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>forward_1747
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-----------------------------------------------CATGGGAGTTGCCAGGTACA-------------
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>reverse_4259
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------------------ATTCGGAACGGAGGGACATG------------------------------------------
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-----------------------------------------------------------------------------
