>input_sequence_32169
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----------------------ATGGAGAACTTCCGTGAGGGAGACGATCGCCTGCAACTGCAAGGGGACGACGAGCTGT
TCCATCACTTCAACTATCTACAGTCTTCGCCGCTGATGGACCAGCAGCAGCTGCTGCAGCCGC---AGTCGTCAACGTGT
GACGCTGCGGCGGAC---CTGGGTGGCCCGCCGGGGATGCCCATGCCCGGGCTGGTGGACTGGGCGTCCCTGCTTCTCCC
GCTGGGGCCGGGCGCCGCCGCTGGGTCCACGTCGCAGCAGCAGGTGGTGGCCGGTGTGGTCGGGGAGGAGATGGTGAGTG
GCGTGGCGGGGGCGGCCGCGCCGGAGAGTGGTGCCGGGAGCAGTAGTGGCGTGGGAAGGGAGGAGACGAAAGGGAAGGGC
AGTGCGCGCGGGCGGGGGAGCAGGAAGGCGAGCCGGCCGCGGTTCGCGTTCCAGACCAAGAGCGAGAACGACGTCCTCGA
CGACGGCTACCGGTGGAGGAAGTACGGCCAGAAGGCCGTCAAGAACAGCGCCTTCCCCAGGTATATACTATAGATTTTTT
ATTGCTCATCGAGGCTAACTTGTGGTGCGTTTGCAGGTTAATGAGCAATTTAGCATGTGATGCGTATGCGTATGTTGAAA
T--------------AGACATG---TTGTGTGTTCTATAGCTGTATGTGTCGAAGTAGAGCATTTTGCTG----------
--------------------TGTGTTTTGTGCAGCTTTTAGCTACGCGCACAAGCTTAATTGGATGCATGCATCATCTAT
AATTTGCACCCTCACCAGCCCTAATTAACCGG-------TACTGTTTAGATGCTCTACGAGATTGTAAGTTTTATGCTGC
ATGCGTGCGTTAAAGCGGATAGCTAGACACCGAGAGAGAGACGATGAAGGCCGGTGTAGCGAGGGAATGCGTCTT-----
----GAGTTGAAAATAACCACAAATCCAGAATTCCAGATATTCCCATCGTGGGTGATCTCTTCATAATGCGA--ATGCAT
GCGTGCTGCTCCTCAGCACTTGCAATTTCACAAAATAGACCATGTTCTGGATCCTAGTAAAGGTGATAAATTCTTGCATA
AAGAGCTAAGAACCTAGTCAGTCAAGCACCATCTGACTCTTTGTTATTGCAATTAGATA-TTTTTGCTAGTGCAGGTTTG
TTCCTTCTGGCCAATTG-----------GTTTTGATCCCCATCGCGGTGCAATTAGTGACCTTATCGA---CGTTGTTGA
TTCCGATCGACACTTGGGAAGGAAGTAGGAAATGAACTATGTCACGGCAATGTGG--GAGAGGGGGCGATGGAAAGAACC
AATCGAATAGGGAAGTGATATGGGGATA----------------------------------------------------
-----------TATAGACATATATGAAGGGTTGACAATTAGGCTCACCCTACAAACGAACTTAACTTGTCATACCGGCGT
AACTTTGGGTGAGATCGCT---------------------------------------AAAGGCTGGAGTATGATTTGGA
CTATATTTGAGGTTTTTTAGAAACACATTACATACGTAGACAATCAGCCCTATGAACCCATATACACATTATATACCATA
AACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCACCCCACCACACCGATCTCACTCCTCGATTATTAACCACATGGGATGTGCTCATAACTTGTAGATGC
ACCT----------------------------------------------------------------------------
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--------------------------------------------------ATCAACCACCCCTCTATGCTATCGTCGACA
TTTAGGTCATTGTCGATATTGGTCAACTATTTCCTTGCCTTCTTCATCTTTCTTCCTTCTCTGTCTCCTATTCCCCTCCC
CACGCTGTTGAATTCATTATGTTT--------CGCCTAGTGCCTTCTTCCTCCTTTGTATCAGAATCTATTCAAGCGTTC
GCTCCCAAACAATAATAATCGGTCTGAACATACGATCCCTACATTTTCCAATCGGAATATGCTTGACCCTACTAGATGGG
CATTCGACAAACACACTTGATCTAATGGAAGCACATATAGTTTGATTTCACGGTTCAATTAGTGTGCTTTGTGAAACATG
TGAAGTATTGGAATGTTGTACACAAGTGTAATGTGTTGTAG---------------------------------------
---CATGCACTGATTAATTGCTATAATCGAATTGACAATGGAATGCCAAGTGATATTATGTTCAACAACTTCCTTAGTCG
AGTAGTAAGTTTTTTTTTTGCCTT-AT-------------------------------------------TGCCAACATT
TGTGTGATATTTCAGGAGCTATTACCGGTGCACGCACCACACATGCAACGTGAAGAAGCAGGTGCAGCGGCTGGCCAAGG
ACACGAGCATCGTGGTGACCACGTACGAGGGCGTCCACAACCACCCCTGCGAGAAGCTCATGGAGGCCCTCAACCCCATC
CTCAGGCAGCTTCAGTTCCTCTCGCAGCTCTAA-----------------------------------------------
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>chr1B_1_TraesCS1B01G363200
TTTCTTTTCCTTTTTAAATTCAGGAAAACATTTCTACATTTGTGAACACATTCTTTAATTCGCAAACATTTTAAATATTT
TTAAA--------AATTCATGGACAACTTTCTAATTTTTT-GAATATTTTTAAATTCACCAACATTTTACATTTTTTTTC
AAATTGATAACTGCTTTGAAAATTTGTGAATATTTTTTTAAATGATGAATTAAATTTCAAATTCATGAACCTTTTTTCAA
AAAAAA--TTTACTTCACGGACATT-TATTAAATCTCTGATTTTCGAAAACCTTCATCATTTTTTCCTAAACTAACAAAA
AAATTGATAGCCGTTTTTACTGAGCAAAAGAGTAGAAGAAGCTCGCGGAAAACAAAAGAAACAAGTGAGCGAAAGCTTGA
TGTGATGGCCCACCAAAAACAGCGCCTACCATTTCGTTGGGTCAGCGAGTGGCGATGGTAGTCTGAACTGCAAGGTCCCG
GCCCGAGTTCCATAGT------TGTTTGTGTGACAGGATCAGGGTCAGACCGACGACATTTTGTCTTCACTTTTTGCGGT
ACGCGCGCACACAGATTTTTTACATGCCCCCCACGTAACCCGATCTGGAGGGGACACGCATGCAGCCAG---TACGTACG
TGGG------GATGTAAAAACTAATCTTAAGGGCT------------CGTGCGTGCGCGGGGGGGCGGACGGGGCAGTTG
AGCCGACCCGATCGGGTAGCTGGGAAACGGTTGCGATGTCGAGCTACGTACCTCTTCCCCCTCGCTCTCTCTCT------
------------CGTGGATCGCGTCCTTGGCTGGCTTGCATGAAGCAGCTAGCACGCTCGATCGGTTTGCCCAACTCCTC
TTACCTTCCCGTCTCACCCTCCGGTCACAGCTACCCGCAGCT----ACAACCCACCGTCTATATACCACGGCGCCCCCTC
GATGTCACACGCTGCGGTCACTCCTCCATCCATCGGTCTCCTCTCCGGCCGCCGGAGCAACCGATCGAGCGGTAGGCACG
TACGTCACTTCCGTA-TTTCTGATGGAGAACTTCCGTGAGGGAGACGATCGCCTGCAACTGCAAGGGGACGACGAGCTGT
TCCATCACTTCAACTATCTACAGTCTTCGCCGCTGATGGACCAGCAGCAGCTGCTGCAGCCGC---AGTCGTCAACGTGT
GACGCTGCGGCGGAC---CTGGGTGGCCCGCCGGGGATGCCCATGCCCGGGCTGGTGGACTGGGCGTCCCTGCTTCTCCC
GCTGGGGCCGGGCGCCGCCGCTGGGTCCACGTCGCAGCAGCAGGTGGTGGCCGGTGTGGTCGGGGAGGAGATGGTGAGTG
GCGTGGCGGGGGCGGCCGCGCCGGAGAGTGGTGCCGGGAGCAGTAGTGGCGTGGGAAGGGAGGAGACGAAAGGGAAGGGC
AGTGCGCGCGGGCGGGGGAGCAGGAAGGCGAGCCGGCCGCGGTTCGCGTTCCAGACCAAGAGCGAGAACGACGTCCTCGA
CGACGGCTACCGGTGGAGGAAGTACGGCCAGAAGGCCGTCAAGAACAGCGCCTTCCCCAGGTATATACTATAGATTTTTT
ATTGCTCATCGAGGCTAACTTGTGGTGCGTTTGCAGGTTAATGAGCAATTTAGCATGTGATGCGTATGCGTATGTTGAAA
T--------------AGACATG---TTGTGTGTTCTATAGCTGTATGTGTCGAAGTAGAGCATTTTGCTG----------
--------------------TGTGTTTTGTGCAGCTTTTAGCTACGCGCACAAGCTTAATTGGATGCATGCATCATCTAT
AATTTGCACCCTCACCAGCCCTAATTAACCGG-------TACTGTTTAGATGCTCTACGAGATTGTAAGTTTTATGCTGC
ATGCGTGCGTTAAAGCGGATAGCTAGACACCGAGAGAGAGACGATGAAGGCCGGTGTAGCGAGGGAATGCGTCTT-----
----GAGTTGAAAATAACCACAAATCCAGAATTCCAGATATTCCCATCGTGGGTGATCTCTTCATAATGCGA--ATGCAT
GCGTGCTGCTCCTCAGCACTTGCAATTTCACAAAATAGACCATGTTCTGGATCCTAGTAAAGGTGATAAATTCTTGCATA
AAGAGCTAAGAACCTAGTCAGTCAAGCACCATCTGACTCTTTGTTATTGCAATTAGATA-TTTTTGCTAGTGCAGGTTTG
TTCCTTCTGGCCAATTG-----------GTTTTGATCCCCATCGCGGTGCAATTAGTGACCTTATCGA---CGTTGTTGA
TTCCGATCGACACTTGGGAAGGAAGTAGGAAATGAACTATGTCACGGCAATGTGG--GAGAGGGGGCGATGGAAAGAACC
AATCGAATAGGGAAGTGATATGGGGATA----------------------------------------------------
-----------TATAGACATATATGAAGGGTTGACAATTAGGCTCACCCTACAAACGAACTTAACTTGTCATACCGGCGT
AACTTTGGGTGAGATCGCT---------------------------------------AAAGGCTGGAGTATGATTTGGA
CTATATTTGAGGTTTTTTAGAAACACATTACATACGTAGACAATCAGCCCTATGAACCCATATACACATTATATACCATA
AACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCACCCCACCACACCGATCTCACTCCTCGATTATTAACCACATGGGATGTGCTCATAACTTGTAGATGC
ACCT----------------------------------------------------------------------------
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--------------------------------------------------ATCAACCACCCCTCTATGCTATCGTCGACA
TTTAGGTCATTGTCGATATTGGTCAACTATTTCCTTGCCTTCTTCATCTTTCTTCCTTCTCTGTCTCCTATTCCCCTCCC
CACGCTGTTGAATTCATTATGTTT--------CGCCTAGTGCCTTCTTCCTCCTTTGTATCAGAATCTATTCAAGCGTTC
GCTCCCAAACAATAATAATCGGTCTGAACATACGATCCCTACATTTTCCAATCGGAATATGCTTGACCCTACTAGATGGG
CATTCGACAAACACACTTGATCTAATGGAAGCACATATAGTTTGATTTCACGGTTCAATTAGTGTGCTTTGTGAAACATG
TGAAGTATTGGAATGTTGTACACAAGTGTAATGTGTTGTAG---------------------------------------
---CATGCACTGATTAATTGCTATAATCGAATTGACAATGGAATGCCAAGTGATATTATGTTCAACAACTTCCTTAGTCG
AGTAGTAAGTTTTTTTTTTGCCTT-AT-------------------------------------------TGCCAACATT
TGTGTGATATTTCAGGAGCTATTACCGGTGCACGCACCACACATGCAACGTGAAGAAGCAGGTGCAGCGGCTGGCCAAGG
ACACGAGCATCGTGGTGACCACGTACGAGGGCGTCCACAACCACCCCTGCGAGAAGCTCATGGAGGCCCTCAACCCCATC
CTCAGGCAGCTTCAGTTCCTCTCGCAGCTCTAACCAATCAACCGTCTGCATGTGGA---ATGCGTACGTAGAGTACGTAC
GTGGCCTACAGCCCAGTGTACTCAGTCCGGGAAGAGAAGGGAATAACATGTCCTACCTCCCAATTACTCACTATACAACA
ACTGATCTCTCTCTCCATATATGTTGTATGTGCTTACTCTTGTTTACATGCACGTAGAGATCAAGACGCATGTGCAAATA
CATGATAC---------------------ATATAGTCGTCCTTGTAATTTCGTCGTTTATAAGTTAATAACACATTTACA
AATTATCCATTTCTCATG-TAGCTTCCTTTTGTGGTAAAAGAACATATATGAGAGAGAAACAAGGAAAAAACACCTATTA
TTTTCTTCTTCTACGAGAAACATCCTCATACTGACAAGTTGAAGGACCAAGAATTAAATTCTCAACTTAGG--------C
TATACATTATGCGTCTGTTTAGGGCACATCTAGATGTGTGCTCTAGTTATTGCACATCTAAATGACTCAATTAACACAAA
AAGGAAAGGAAAAAG---AAAAAAAACACTCACATGAATCTCCACGTTTGATCAATGACACATGACTTAGATGTGCAATA
CTTAATTATGGCACACTAGATGTTCTTTAGTAGCAAAACCGGTTCATTATAACACTAAGAGCGTGTGCGAACTGGGCGTA
TTTCAGATGACTAGCTTCCTTGTGGTGGAACCATCCCACTAGGGTTCATGTCCCAGACTTGGCACTGGTGTTTGTATTTT
TCTGAATTTATTTTAGGATTTTCGATGATACTTGTTCAGTAGGAGGAGACGTTCCCGTCGACT-----ACGCCTGTGGTG
ACTTCGTCAATCTGAATATATGATGTCGGCTCAATATCACGGAGGTGCTCATATGAGTAGGGTGTGCGTGCGTGCGTTCA
TAGAGTGAGTGTACAAGGGCGTCTACGGTTGTACTGTGTTGAAAAATCATTAAGGGTGTCTTTAATTATCTTCATCAAGT
CCAACCACCCTTGTCAGATGCAAACTCTTCATTT
>chr1D_1
TTTCTTTTCCTTTTTAAATTCATGAAAGCAATTCTACATTTGTGAACATGTTCTTAAATTCGCAAACATTTTTCCATTTA
TTAATATTTTTTGAATCCATGGACAACTTTCTAATTTTTTTGAATATTTTTAAGTTCACAAAATTTTTATTTTTT---TC
AAATTGATAACTGCTTTTAAAATTCGTGAATATTTTTTGAAGTGATGAACAAAATTTCAAATTCATGAACTTTTTTTAAA
ACATATTTTTTACTTGACGGGGATTCTATTAAATCTGTGTTTTCCCAAAATTGTCATCATTTTTTTTCTA----------
--------AGCTGTTTTTCCTGAGCAAAGAGTAGAGTAGCCAGAGA--AAAACAAAAGAAACTATGGAGCGAAAGCTTGA
TGGGCCGACCCCCCAAAGACAGCGCCTAGGATTTCGTTGGCGTCAGCCTCGCGATGC-TAGTCTGAACTGCAAGGTCCCG
GCCCGGGTTCCATAGTCCATAGTGTTTGTGTGACAGGGTCAGGGTCAGACCGACGACATTTTGACTTGACTTTTTGAGGT
ACGCGCGCACACAGATTTTT-ACATGGCCGCCACGTAACCCGATCTGGAGGGGACACGCATGCAGCCAGCAGTACGTACG
TGGGGAAATCGATGTAAAAACTAATCGG-AGGGCTCGTGCCGTCGTGCGTGCGTGCGCGCGGGGGCGGACGGGGCAGTTG
AGCCGACCCGATCGGGTAGCTGGGAAACGGTTGCGATGTCGAGCTACGTAGCTCGTCCCCCTCACTCTCTCTCTCC----
--------CTCCCGTGGATCGCGTCCTTGGCT----TGCATGCCGCAGCTAGTACGC----TCGGTTTGCCCAACTCCTC
TCACCTTCCCGTCTCACCCTCCGGTCACAGCTACCCGCAGCT----GCAACCCACCGTCTATATACTTCGGCGCCCCCTC
GATGTCACACGCTGCGGTCACTCCTCCATCCATCGGTCTCCTCTCCGGCCGCCGGAGCAACCGGTCCAGCGGCAAGCAAG
TACGTCGCCTCCGTACTTTGTGATGGAGAACTTGCGCGAGGGAGACGATCACCTGCAACTGCAAGGGGACGACGAGCTGT
TCCGCCACTTTCAGTATCTGCAGTCTCCGCCGATGATGGAGCA------------GCAGCCGC---AGTCGTCGACGTGC
GATGCTCCGGCGGATCATCTGGGTGGCCAGCCGGGGATGCCCATGCCCGGGCTGGTGGACTGGGCGTCCCTGCTTCTCCC
GCTGGGGCCGGGCGCCGCCGCCGGGTCCACGTCGCAGCAGCAGGTGGTGGCCGGTG---------AGGAGATGGTGAGCG
GCGTGACTGGGGCGGCCGCGCCGGAGAGTGGTGCCGGGAGCAGTAGTGGCGTGGGAAGGGAGGAGACGAAAGGGAAGGGC
AGTGCGCGCGCCAGGGGGAGCAGGAAGGCGAGCCGGCCGCGGTTCGCGTTCCAGACCAAGAGCGAGAACGACGTCCTCGA
CGACGGCTACCGGTGGAGGAAGTACGGCCAGAAGGCCGTCAAGAACAGCGCCTTCCCCAGGTACGTATATATGTTCATCG
CTTCTTCTCGCCATGGCTAACGATCACCTCGTGGTACCTACGTTGCAGGTTCGCATGTGAAGTGCATGCATATTGTTGAG
AACTTGAAATCAACATGTTGCGTACTTGTGTGTGCTCTTTGTGCTTAC-----AGTAGACCATTTA--------------
--------------------TGTGTTTTGTGTAGC--TTAGCTAGGTGCATAAGCTT----GGGTAC---CATCATCGTT
AATTTGCAACCTAGTAG-------TATACTAACTGGTACTACTCTTTACATGTGCTATATGATATTGTATATTGTTCTT-
---------------------------------------GATGAGGAAGGCCGGCCGTAGCGCGTGACGACGAAATGCTT
CCAAAAGTTGAAAATAATTGTAGATATAGAA--CCTGGTATTCCCATTGCGGGTGATCTCTCCACACACAATTCATGCAT
GCGTGTTGCTTATCAACTATTGAAATTTTGCAAAATGGACTCATAGTATGCACAA-------GTGATCAATTTTCACATG
AACAGCTAAGAACCTAGTAAGTCCAGCATTGACTCCTTCAGATGTGC--CAATTAAACA-TTTTTGCTAGTGCATTGTTT
GTTCT---------TTCTGAACCAATATGCTTAGATCCCCATCATGATCCCACTAGTGACCTTAGCGT---CATTGG---
TTTGGATCGCCACTTGGGAAGGAGGTAGGAGG-GAACTATGTCACGA-AGCGTGGGAGAGAGGGGGCGATGAAAATACCC
AGTTGAAGAGGGAAGTGATATGATAACATGGCCTATGTGGTAAGGCATCTCAAAACTCAATATATACAAGAAGAGGGAAG
GTATATGGAGCTATAGACATATATGACAGGTTGACAATTAGGCCAACCTGGCCAACAAACTAAAGGTGTCATGTGAATGC
AACTTTGGGTGTGATGGCCAAAGGGTGAAGGTTTTTGTTTTTGTTTTTGCGGGTGACCAAAGGGTGAAGTTTGATTTAGA
CTATATTTGAGGAGAAACATGGTACGCAGG--------------------TATGCACACATATACACATATGTGAACTCA
CCCAACCTTGTTGAGCACCTCCAAGAGTCTGAGATGGAAAATCTTGAGATCAATGAAGTCACCATAGACATCTTATAGTC
GATGGCCACGTCGTTTCACATGGAAAGAATAACGCCGAAATTTTGTAATATATGTGGGAAGATGCGAGCACCCGGTCCAA
GTCAGGACTTGAACTTGAACCCGACTAGAAATTTATTTGCATAGACCGTGGGTGGATGAAAGACTAGCTTGGGCAGGCAA
GTGATGATCCGAGAAATTGCAATAGGGATATAGGATAGTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATG
AACTTCTTTTGCTCAAGGCTTCTCACACCCTTCACCTCCCCCATCTTCTTTGTCCCGTCCACCGCACTGATCCACGCTCT
TCAATTTGCAACCAACCAACCATAGGGGATGCGGCGATGTCCAATTGGGGTGTCGACACGCCATAAGCATGCCTTCCACT
AATTGGTAGGGGTGGGGAGGGGGATTGAGGTGCTCCCAAGCTAGGCGTCGATCAACCACCTCTCCAGGCTATTGTCGACG
TTGAAGTCATTGTTGATGTTGCTCAACTCCTTCCTTGCCTTATTCTTCCTCCTTCATTCTCTG--------TCCCCTCCT
CTCGCCATTGAATTCTTCATTTCTTTCCATCGCGCCTAGTGCCTTCCTCCTCCTTTGCATCGGAGGGTGTTCAAGTGTTC
ACTCCCAAATAATAGTCGCCCCGCTGAAGGTTCGATCTGTAGAATTTCAAATTGTAATGTGTTTGGCCCTATTAGGTGGA
CAATCAACAAACACACTCAATCAAATTGAAGCACATATGATTCGACTTCGTAGTTCAATTAGTGTGCTTTGTGAAACAGA
TGAAGTATTGAAATGTTGTACACAAGTGTAATGTGTTGTAG-AACACATGCAAATACGCACCACATTTCAGAGCATGTAG
TTACATGCACTGATTAATTGCTACAGCCGAATTGACAATGCAGTGCCAAGTAGTATTATGTTCAGCATCTTGCTTAGTGT
ACTAAG-----TTCTTTCTGCCTTCAAAAGACATCACGTTCTGTC----------TAATGCATGCATGCATG--------
--TGTAATGATCCAGGAGCTACTACCGGTGCACGCACCACACGTGCAACGTGAAGAAGCAGGTGCAGCGGCTGGCCAAGG
ACACGAGCATCGTGGTGACCACGTACGAGGGCGTCCACAACCACCCCTGCGAGAAGCTCATGGAGGCACTCAACCCCATC
CTCAGGCAGCTTCAGTTCCTCTCGCAGCTCTAACCAAACAACCGTCTGCATGTGGAGGAACGCGTACG-AGAGTACGTAC
GTGACCTACAGCCCAGCATACTCAGTCCGGGAAGAGAAGGGAATAACATGTCCTACCTCCCAATTACTCACTATACAACA
GCTGATCTCTCTC--CATATGTGTTATATGTACTTACTCTTGTTTACATGCACGTAGAGATGAAGACGCATGTGCAAATA
CATGATAC---------------ATATATATATAGTCGTCCTTGTAATTTCGTCGTT--TAAGTTAATAACACATTTACA
AATTATCCATTTCTCATG-TTGCTTCTCTTTGTGGTAAAAGAACATATATGAGAGAGAAACAAGGAAAAAACACCTATTA
TTTTTTTCTTCTACGAGAAACATCCTCATATTGACAAGTTGAAGGACCAAGAATTAAATTCTCAACTTAGGCTAATAGGC
TATACATTATGCATCTGTTTAGGGCACATATAGATGTGTGCTCTACTTATTGCACATCTAAGTGACTCAATTAACACAAA
AAGAAAAAGTAAAGAAAAAAAGAAAACACTCACATGAATCTCCACGTTTGATCAATGGCACATGACTTAGATGTGCAATA
CTTATGA----CACACTAGATGTTCTTTAGCAAAACTGA---TTCATTATAACACTAAGAGCGTGTGCGAACTGAGCGTA
CTTCAGATGACTAGCTTCCTTGTGGTGGAACCATCCCACTAGGGTTTAAGTCACAGACTTGGTACTGGTGTTCGTATTTT
CCTGAATTTATTTCAGGCTTTTCGGTGATACTCGTTCAGTGGGAGGAGACGTTCCTGTTGACTATGAGACGCATGTGATG
ACTTCGTCAATCTAAAGATATGATGTCGGCTCAATATTTCGCAGATGCTCATAGTGGCAGGGTGTCTGCGCGTGCGTTCA
TAGGGTGAGTGTATGAGGGCGTCTATGTGTTAAAAAG---------TCATTAAGGGCGTGTTTAATTATCGTCACCAAGT
CCAA------------------------------
>chr1A_505
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------------------------------------------GGTCAGACCGACGACATTTTGCCTTGACTTTTTGAGGT
ACGCGCGCACACAGATTTTT-ACATGCCCCCCACGTAACCCGATCTGGAGGGGACACGCACGCAGGCAG---TACGTACG
TGGG------GATGTAAAAAACTAATCG-AGGGCT------------CGTGCGTGCGCGCGGGGGCGGACGGGGCAGTTG
AGCCGACCCGATCGGGTAGCTGGGAAACGGTTGCGATGTCGAGCTACGTAGCTCGTCCCCCTCACTCTCTCTCTCTCTCT
CTCTCTCTCTCCCGTGGATCGCGTCCTTGGCT----TGCATGCCGCAGCCAGCACGC----TCGGTTTGCCCAACTCCTC
TCACCTTCCCGTCTCACCCTCCGGTCACAGCTACCCGCAGCTAGCTGCAACCAACCGTCTATATACCACGGCGCCCCCTC
GATGTCACACGCTGCGGTCACTCCTCCATCCATCGGTCTCCTCTCCGGCCGCCGGAGCAACCGATCGAGGCTGGGCGAGC
GGCGTCACTTCCGTA-TCGGTGATGGAGAACTTGCGGGAGGGAGACGACCACCTGCAACTGCAAGGGGACGACGAGCTGT
TCCGTCACTTCCAGTATATGCAGTCTCCGCCGCTGATGGAGCA------------GCAGCAGCCGCAGTCGTCGACGTGC
GACGCTGCGGCTGATCATCTGGGTGGCCAGCCGGGGATGCCCATGCCCGGGCTGGTGGACTGGGCGTCTCTGCTTCTCCC
GCTGGGGCCGGGCGCCGCCGCCGGGTCGACTTC---GCAGCAGGTGGCGGCCGGTGTGGGCAGGGAGGAGATGGTGAGCG
GGGCGGCGCCGCCGCCGCCGCCGGAGAGTGGTGCAGGGAGCAGTAGTGGCGTGGGAAGGGAGGAGACGAAAGGGAAGGGC
AGTGCGCGCGGGCGGGGGAGCAGGAAGGCGAGCCGGCCGCGGTTCGCGTTCCAGACCAAGAGCGAGAACGACGTCCTCGA
CGACGGCTACCGGTGGAGGAAGTACGGCCAGAAGGCCGTCAAGAACAGCGCCTTCCCCAGGTACGTATATATGTTCATCG
CTTCTTCTCGCCATGGCTAACGATCAC-TCGTGGTACGTACGTTGCAGGTTCGCATGTGACGTGCATGCATA--------
AACTTGAAATTAATCAAACATG---TTGTGTGTGCTCTTTGTGCCGAC-----AGTAGACCATTTGTGTGTTTGTGTACC
CATTTTTTTTTGCGGGGTGTTGTGTTTTGTGTAGA--TTATCTAGGTGCATAAGCTTAATTGGTTAC---CATCATCGTT
AATTTGCACCCTAGCCCCTAGTTATATACTAACTGGTAT--------------------------------------TT-
---------------------------------------GATGACGAAGGTCAGCCGTAGCAAG---CGACAAAATGCTT
CCGGGAGTTGAAAATAAAGATCG-------------GATATTCTTATTGTAGGTGATCTCTCCACATGCAATTGATGCAT
GCATATCGGTTATCAACTATTGAAAGTTCGAAAAATAGACTCATAGTATGAGCAA-------GTAATCAATTCTCACATG
AATAGCTAAGAACCTAGTAAGTCCAGCATTGACTTCTTTAGATGTGC--CAATTAGACATTTTTTGCTAGTGCATTGTTT
GTTCT---------TTG-----------GCTTTGGTCCCCATCATGATCCTACTAGCGACCTTATCAATGCCATTGG---
TTCTGATCCACATTTGGAAAGAAAGTAGGAG---AACAGTGTCACGATAGTGTGGGAAAGACGGGGGCAATAAAAGACCC
AATCGAGGAGGGAAGGGATATAACAACATGGGCTATGTGGTAAGGTACCTCAAAACTCAATATATCTAAGAAGAGGAGAG
GGATATGGAGCTATAGACATATATGACAGGTTGACAGTTAGGCTAACCCTGCCAACAAACTTAAGGTGTCATGTGAACGG
AAGTTTGGGTGTGATGGCCAAATGGTGAAGTTTGTTTGTGGGACCCGATTGCATTTTTAGCCCGTTTATGTGTGGGGTTG
GGCAGTCAGATTCGCGTTTAACCCAGGCAAAGCGAGCGGTTTTCACACTTGGTAGTTTTTTGTCACGGATTAACAAAAAA
GTGGTAGTTTTCGGGACAAAATCGTAAAGTGG------------------------------------------------
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-------------------------------------TAGTTTTCTGTCACGTTTCCGCGAATTGTGGTAGTTTTTGGTT
AAATACTCTTTTTTTTACTAT-----------------------------------------------------------
------------------------------------------GTGCCAAGTAATATTACTTTCAGCAGCTTGCTTAAT--
---AAG-----TTTTTTCTGCCTT-AAAAGACATCACGTTCTGTCTTTCACCGACTAATACATGCATGCATGCCGACATT
TGTGTGATGATCCAGGAGCTACTACCGGTGCACGCACCACACATGCAACGTGAAGAAGCAGGTGCAGCGGCTGGCCAAGG
ACACGAGCATCGTGGTGACCACGTACGAGGGCGTCCACAACCACCCCTGCGAGAAGCTCATGGAGGCCCTCAACCCCATC
CTCAGGCAGCTTCAGTTCCTCTCACAGCTCTAACCAATCAACCGTCTGCATGTGGAGGAATGCGTGCG-AGAGTACGTAC
GTGACCTACAGCCCAGCATACTCAGTTCGGGAAGAGAAGGG-ATAACATGTCCTACCTCCCAGTTACTCACTATACAAC-
--TGATCTCCCTC--CATGTATGTTGTATGTACTTACTCTTGTTTACATGCATGTAGAGATGAAGATGCATGTGATTCCA
TGCTAAAATACATGTATGATATGATACATATATAGTCGCCCTTGTAATTTGGTCGTT--TAAATTGATAACACATTTACA
AATTATCTATTTGTCATGGTTGCTTATTTTTGTGGTTAAAGAAGATATGAGAGAAACAAGG-----AAAAACACCTAGTG
TTTTTTTTTTCT--------------------------------------------------------------------
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>chr1B_2930
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-----------------------------------CTAGTGCCTTCTTCCTCCTTTGTAAGTTG-----TTCAAGCATTT
GTTCCCAAATAATAGTCGCCTTGCTGAAGATTTGATCCCTAGATTTTCAAATTGTAATATGATTGGCCCTATTA----GA
CATTCAACAAACACACTCAATCAAATTGAAGCACATATAGTTTAATTTTGCAATTCAATTAGTGTGCTTTGTGAAACAAA
TGAAGTACCGAAAAGTTGTACACAAGTGTAATGTGTTGTAGCAACACTTGCAAACACACACCACATGTCAGCGCCTGCAG
TTACATGCACTGATTAATTGCTACAACCGAACAACAATGCCAAGTAGTAGTAGTAGTATTTTCATCAGCTTGCTTAGT--
---AAG-----TTTTTTCTTCCTT-AAAAGACATCATGTTTTGTCTTTCACCGACTAATACATGCATGCATGCCGACATT
TGTTTGGTGATCCAGGAGCTACTACAGGTGCACGCACCACACGTGCAACGTGAATAAGTAAGTGCAGCGGCTGGCCAAGG
ACACGAGCATTGTGGTGACCACGTACGAGGGCGTCCACAACCACCCCTGGGAGAAGCTCATGGAGGCCCTCAACCCCATC
CTCAGGTAGCTTCAATTCCTCTCGCAGCTCTAACCAATCAACCGTCTGCATGTGGAGGAATGCGTACG-AGAGCACATAC
GTGAACTACAGCCCAACGTACTCGGTCCGGGAAGAGAAAGGAATAACATGTCCTACCTCCCAATTACTCACTATACAACA
ATTGATCTCTCTC--CATATGTGTTATATGTACTTACTCTTGTTTACATGCATGTAGAGATGAAGATGCATGTGATTCCA
TGTGATAATACATGT---ATATGATACATATATAGTCGTCCTTGTAATTTGGTCATT--TAAATTGATAACACATTTACA
AATTATCTATTTGTCATGGTTGCTTCTTTTTGTGGTTAAAGAA-------------------------------------
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>SNPs
----------------------S----S--S-----------------SS-----S----------------SSSSS--S
----S-----------S------------------------------------S-----S--SS-----SS----SSS--
-----------------S------S-------------S--S-------SS-------------------S------S--
-S-S-S---------S----SS--------------S--S---S-S----SSS------------SSSS-SSSSSSSSSS
SSSSSSSS---S------S---------SSSSSSSSSSSSSSSS-SSS--------------S-SS--------------
--S-SS-S---S-----S----------SS----------SSSSSSSSSS-SSSSSSS----------------------
-----S-------------------------------S-------------------------S---S--------S---
--------------------S-----------------------------------------------------------
--------------------------SSS------------------------------S--------------------
--------------------------------------------------S---S--------S----------------
--------------------------------SSSS------SS-------------SSSS-------------------
-S--------------------------------------------S---------------------------------
------------------------------------------------------------------------S-----S-
-------------------S-------------S--S-------------S-----------------------------
---S-------S-S-----S------S-------------S--SSSSSSSSSSSS------------------S-----S
--------------S-------------S---------------------------------------------------
---------------------S-------------------------------------S-S----------------S-
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---------------------------------------------------------------SS--SSSSS-S-SS-SS
S--SS--SSSSSSSSSSSSSS-SSSSS-SSS--SSSSS--SSSS---SS--S--------S-S-S----S---SS-SS-S
S--------------------------------S--S-SSS--SS-SSSSSSS------S-----SSS------------
-------------------------------S---SS-------S-S---S------------S-S-SSS-------SS-
------------SS--SSSSS-S--SS--SSS-----------S----S---SS---SSS---SS-SSS-S--S-S--SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S--S---------SSSSSSS-S-SS-S-SSSSSS-----
-----------------SS-S-S--SS----SS--S-----------S-------------S--S-SSSSSS--------
-----S----SS---S-SS---S------S----------SSSSSSSSS--S-SSSSSSSSS-----S------SS---S
--S---------------S----S----SSSS--SSS--SSSSS-SSSS--------S----------------SSS--S
S-S--SSSSSSSSS---------------S-------------SS-S-S-S-S-------------------S---SSSS
---S--------------------------SSS-------------SS-S---------------------S-----S--
-------S--------------SSS-S-----------------------------------------------------
--------------------------SS----------------S-----S-S---S-------SS------SSSSS--S
-----------S---S--S--------------------------------------------S--S---S------S--
------------SSSS---S-SS--SSSS-SSSSS-SS-SSSSSSSS-SS----S--S------------SS-S-S--S-
SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS-SSSSS-S-S-SS---S-SSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS----------------------------------------------------------------------------
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------------------------------------------------------------S---S-S-----S------S
--S-S--------S---S---S------SS-----------S---S--S-S----S-------SSSSSSSS--------S
-S---SS--------S-S--S-S--------------------------------------S--SSS-S-----------
---------S----S-SSS-SSS-----S--S---------S------S---S-S------S---S-----S---S---S
-----S-----------SS---S---S----------------------------------------------------S
----------S---------------------------------------------------------------------
-----------------------S--S-------------S----------S------------S--S---S------SS
-S--SSSSSSS------S--------S-----------------------------------------------S-----
--------SS-S---------S----------------------------------------------------------
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--------------------------------------------------------------------S-----------
---S------------S---------------------------------------------------------------
-------------SS----------------S-----------------------------S------------------
---------------------------------------------------------SS---------------------
--------------------S-----S-----------------------------------------------------
----S-------------------------S-------------------------------------------------
------------S----------------S---------------S---------------S------------------
---S---S-S---SS------S-----------------------------------S----------------------
----SSSSSSS-------------------S-SS-SSSSSSS--------------------------------S-----
S---------------------------------------------S-S---S---------S---------S-------
S------------S---S------S-------S-------S--------------S--S-------------S----S--
-------------S--S--------------------SS--S--S--------SSS-S-------SS-S-----------
---S---------SS----------S-SS-SS-SSSSSSSSSSSSS----------S--S----------S---S-----
----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_771
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-------------------------------TGCGATGTCGAGCTACGTAC-----------------------------
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>reverse_1954
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---------------------------------GAGAGAGACGATGAAGGCCG---------------------------
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>forward_1942
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--GCGTGCGTTAAAGCGGATAG----------------------------------------------------------
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>reverse_2981
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--------------------CACACCGATCTCACTCCTCG----------------------------------------
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>forward_2624
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--------------------------------------------TGGGTGAGATCGCTAAAGGC----------------
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>reverse_4324
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---GCCTACAGCCCAGTGTACTC---------------------------------------------------------
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----------------------------------
