>input_sequence_31932
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-------------------------------------------------------------------ATGGAGTCGGATC
AGGGCAAGCTCTTCATCGGCGGCATCTCCTGGGAGACGACGGAGGAGAAGCTGCAGGAGCACTTCTCCAACTTCGGCGAG
GTCTCCCAGGCCGCCGTCATGCGCGACAAGCTCACCGGCCGCCCGCGGGGCTTCGGCTTCGTAGTCTACGCCGACCCCGC
CGCTGTCGACGCCGCCCTCCAAGAGCCCCACACACTCGACGGCCGCACGGTACCTACTCCCCC-TCGCTTGGTCTCTTCA
CCCCACCCAAACCCTAGCGGGATATTCGCGTCGAATATTCGCTTCGGTCGCGTTCCGATCTACCCCGCTGCAGCGGCCTA
GGGTTGCGCGTGTGTGCTCAAGCGTGG---------------------CTTGTGATTTTGTTGTCTCA---GGTTGATGT
GAAGCGGGCGCTCTCGCGGGAGGAGCAGCAGGCTACCAAGGCGGTGAACCCTAGCGCAGGAAGGAACGCTGGAGGTGGAG
GGGGT------GGTGGCGGAGGCGATGCCGGTGGTGCTAGGACAAAGAAGATCTTTGTGGGCGGGCTGCCCTCCAGTCTG
ACAGATGAGGAGTTCCGGCAGTACTTCCAGACCTTCGGGGCTGTCACCGATGTTGTGGTGATGTATGACCAGACAACACA
GCGCCCCCGGGGCTTCGGCTTCATTACCTTTGACTCGGAGGATGCGGTTGACCGTGTGCTGCACAAAACCTTCCACGATC
TTGGAGGGAAGATGGTAGAGGTGAAGCGTGCTCTGCCTCGAGAGGCGAATCCTGGCTCTGGCGGCGGCGGCCGTTCCATG
GGAGGTGGGGGTTTTCATAGTAACAATGGACCTAACTCCAATGCTAGCAGCTATGATGGCAGAGGCGATGCTAGCAGATA
TGGGCAGGCGCAGCAAGGCAGTGGTGGCTACCCAGGTTATGGCGCTGGAGCTTATGGCAGTGCTCCAACTGGATATGGAT
ATGGGCACACCAATCCTGGAACTACATATGGAAATTATGGGTCTGCAGGGTATGGAGGTGTTCCTGCTGCGTATGCTGGG
GCTTATGGCAATCCAAGTGCTGCTGCATCTGGTTACCAGGGTGGCCCTCCAGGCGCTAATAGAGGACCCTGGGGCAGTCA
AGCTCCATCTGGTTATGGCACTGGGGGTTATGCTGGCAATGCAGGCTATGGTGCATGGAATAGCTCTTCTGCTGGTGGGA
ATGCACCCACTAGTCAGGCACCTGGTGCAGCTGCAGGTTATGGAAACCAGGGCTATGGTTATGGTGGATATGGAGGAGAT
GCATCATATGGTAATCATGGAGGGTATGGTGCTTATGGTGGTCGGGGAGATGGTGCTGGAAATCCTGCTACTGGTGCAGC
CTCTGGGTATGGTGCTGCTGGATATGGAAGTGGGAATGGAAACTCTGGATATCCAAATGCGTGGACTGATCCTTCACAAG
GCGGAGGATTTGGTGGTGCAGTCAATGGAGCTTCTGAGGGCCAATCAAATTATGGCAGCGGTTATGGTGGTATGCAGCCT
AGGGTTGCTCAGTAGAAGAGGCCGTTATAATGTTCATGGTGTGAACCAGTGCATTTGGGCAGCATATGTATTATTGCAGT
ATTCTGGCTTTGCTCTCGTCTTCCTGAAGACCATCCATTCTGCCGGTTAAATCAGTATTTCTCCTGGTTGGAATGCTTGA
TCCTTTCGTGGCTTAACTAGAACTTCAGTCAATAAGTAGCTATTATGTCGAGTAGCTGTATCTTCATAATGCTTTATTTA
TGTTTAGCTTATCCTTCGGTGTGCTTTGTCATCAGTGGAGTTTCAGGTTGCTTTATCTCTAGTTTAAAGCTAGAGTAGCT
TCACTGCTTATGGAC---------TAGTTGTATCTCTATTCTACAGAATCATATATTCGTGTTTGACTGTAGTATTTATG
CTGGATACTCTCTCCCTATTGTG-TTAAGTCTGAAACGTTTATTGCTGGTGGTTGTGTTCATCTCTGGTTCCTTGCTTTG
CTTTAGCTCACCTTGGAGTTAAGGTGTTACTTCTATTCTTCAAATTTGACGGCTTGCAACAGATGCTAATCCTG-AACTA
TGCACTGATAGAAGCTTGGTACCATAGCTGCTTCAAACGGATGGTCAAGTGTAGTGCGCTTCTTTATGTAACTGGAATGT
GACATCCTATGTATACATTTG-TTTTGACAAACATTGTTCGTATGCATGATGAAGCTGTGAATATGTTTCAGGGTTAGCA
TCTGATG-TT-GGTATGTAGATTGATAAAACAGGCATAGTAGAGGGAACTGATTAGCCCTTCAAGCCTTTTGGTCTTAAA
ATTTTGATAGTATGTTTGCAGTGATAGAGAGCTTACTAGCAGCAAGATGGTAGCATCAACTTCTAAGGTAGTGTAGATGC
CAAAAAATCAGTGATTCTACATGATGAATGATGTACAGGTAGAAACCCTAGAGTACAGTAGTGAGGCATTTGGCAAGTAA
AATAATTGTCCTTCCTCCTTCGTTTCGTTTCTGTACAGGTTGCACGTGA-------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>chr1B_1_TraesCS1B01G168200
AACACTATTCTTCTTTAAGTACTAGAGATTCTTAGCGTCCTCTTAATGAAGGCATTTTTTTACGGGTTACAGTTCAAAAA
GAAACACTATCTATGCATCCATGTTTTTTTAACGTCCATGCTTGAATTTTCTAGGTGCTTGTAACTTTTTTTTGCCAAGA
TCATATCTGGAGGAGCTCAGTCAAAAAAAGAAAAAGAAAAATGAAAATCAGAGTTCCAAAATGTCCAAAGTTGCTCGCTT
TTCCGAGCTCTCAATGTTTTCTTTACCTAGCTCCTCCGATGTCATCTCACCATGAAAATCCACATGCACCTAGAAAATTT
AAGCATCTTTGCTGTCTTTTTTTCTCTCCATATTTTGTTATTTTACTACTACTTTTTTAAAAAAAAATTGCGAGACAGTT
TTCTAATTTTTTTCGAGACAAAATTTTCTATTAT---TTATTGTTCACGCACGGGAAGAGATCCCCTAAAAAAACCTGGA
TGCAGAAATTTCGCCCTCCAGATCCATTTCAAGGAAATTTCGGCCCATATAGTAGAGTAACAACAAGAACAGCCAAAGCC
CT-------GAGAAAAAGAACTCCGAAAAGCCCCGATGAGATAGTAAGAAACC----------------CTACTAGTACG
CCCACCGATTCCCCGTGTCCCCCCGCAGGCCCGCACCCCGCACGCGCCCTAAAATATCCCAAAGCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGCCCCCCTCCCGCACCCGAGCGCGAGAGAATCCGAGGAGCGGAGCGGCGCAAGGAGGCG-AGATGGAGTCGGATC
AGGGCAAGCTCTTCATCGGCGGCATCTCCTGGGAGACGACGGAGGAGAAGCTGCAGGAGCACTTCTCCAACTTCGGCGAG
GTCTCCCAGGCCGCCGTCATGCGCGACAAGCTCACCGGCCGCCCGCGGGGCTTCGGCTTCGTAGTCTACGCCGACCCCGC
CGCTGTCGACGCCGCCCTCCAAGAGCCCCACACACTCGACGGCCGCACGGTACCTACTCCCCC-TCGCTTGGTCTCTTCA
CCCCACCCAAACCCTAGCGGGATATTCGCGTCGAATATTCGCTTCGGTCGCGTTCCGATCTACCCCGCTGCAGCGGCCTA
GGGTTGCGCGTGTGTGCTCAAGCGTGG---------------------CTTGTGATTTTGTTGTCTCA---GGTTGATGT
GAAGCGGGCGCTCTCGCGGGAGGAGCAGCAGGCTACCAAGGCGGTGAACCCTAGCGCAGGAAGGAACGCTGGAGGTGGAG
GGGGT------GGTGGCGGAGGCGATGCCGGTGGTGCTAGGACAAAGAAGATCTTTGTGGGCGGGCTGCCCTCCAGTCTG
ACAGATGAGGAGTTCCGGCAGTACTTCCAGACCTTCGGGGCTGTCACCGATGTTGTGGTGATGTATGACCAGACAACACA
GCGCCCCCGGGGCTTCGGCTTCATTACCTTTGACTCGGAGGATGCGGTTGACCGTGTGCTGCACAAAACCTTCCACGATC
TTGGAGGGAAGATGGTAGAGGTGAAGCGTGCTCTGCCTCGAGAGGCGAATCCTGGCTCTGGCGGCGGCGGCCGTTCCATG
GGAGGTGGGGGTTTTCATAGTAACAATGGACCTAACTCCAATGCTAGCAGCTATGATGGCAGAGGCGATGCTAGCAGATA
TGGGCAGGCGCAGCAAGGCAGTGGTGGCTACCCAGGTTATGGCGCTGGAGCTTATGGCAGTGCTCCAACTGGATATGGAT
ATGGGCACACCAATCCTGGAACTACATATGGAAATTATGGGTCTGCAGGGTATGGAGGTGTTCCTGCTGCGTATGCTGGG
GCTTATGGCAATCCAAGTGCTGCTGCATCTGGTTACCAGGGTGGCCCTCCAGGCGCTAATAGAGGACCCTGGGGCAGTCA
AGCTCCATCTGGTTATGGCACTGGGGGTTATGCTGGCAATGCAGGCTATGGTGCATGGAATAGCTCTTCTGCTGGTGGGA
ATGCACCCACTAGTCAGGCACCTGGTGCAGCTGCAGGTTATGGAAACCAGGGCTATGGTTATGGTGGATATGGAGGAGAT
GCATCATATGGTAATCATGGAGGGTATGGTGCTTATGGTGGTCGGGGAGATGGTGCTGGAAATCCTGCTACTGGTGCAGC
CTCTGGGTATGGTGCTGCTGGATATGGAAGTGGGAATGGAAACTCTGGATATCCAAATGCGTGGACTGATCCTTCACAAG
GCGGAGGATTTGGTGGTGCAGTCAATGGAGCTTCTGAGGGCCAATCAAATTATGGCAGCGGTTATGGTGGTATGCAGCCT
AGGGTTGCTCAGTAGAAGAGGCCGTTATAATGTTCATGGTGTGAACCAGTGCATTTGGGCAGCATATGTATTATTGCAGT
ATTCTGGCTTTGCTCTCGTCTTCCTGAAGACCATCCATTCTGCCGGTTAAATCAGTATTTCTCCTGGTTGGAATGCTTGA
TCCTTTCGTGGCTTAACTAGAACTTCAGTCAATAAGTAGCTATTATGTCGAGTAGCTGTATCTTCATAATGCTTTATTTA
TGTTTAGCTTATCCTTCGGTGTGCTTTGTCATCAGTGGAGTTTCAGGTTGCTTTATCTCTAGTTTAAAGCTAGAGTAGCT
TCACTGCTTATGGAC---------TAGTTGTATCTCTATTCTACAGAATCATATATTCGTGTTTGACTGTAGTATTTATG
CTGGATACTCTCTCCCTATTGTG-TTAAGTCTGAAACGTTTATTGCTGGTGGTTGTGTTCATCTCTGGTTCCTTGCTTTG
CTTTAGCTCACCTTGGAGTTAAGGTGTTACTTCTATTCTTCAAATTTGACGGCTTGCAACAGATGCTAATCCTG-AACTA
TGCACTGATAGAAGCTTGGTACCATAGCTGCTTCAAACGGATGGTCAAGTGTAGTGCGCTTCTTTATGTAACTGGAATGT
GACATCCTATGTATACATTTG-TTTTGACAAACATTGTTCGTATGCATGATGAAGCTGTGAATATGTTTCAGGGTTAGCA
TCTGATG-TT-GGTATGTAGATTGATAAAACAGGCATAGTAGAGGGAACTGATTAGCCCTTCAAGCCTTTTGGTCTTAAA
ATTTTGATAGTATGTTTGCAGTGATAGAGAGCTTACTAGCAGCAAGATGGTAGCATCAACTTCTAAGGTAGTGTAGATGC
CAAAAAATCAGTGATTCTACATGATGAATGATGTACAGGTAGAAACCCTAGAGTACAGTAGTGAGGCATTTGGCAAGTAA
AATAATTGTCCTTCCTCCTTCGTTTCGTTTCTGTACAGGTTGCACGTGACGCCATTCCGTGTAAAGAATGTCCAAGTGAG
GGTGAAAATGATATCGGAAATCTGCTGGTTTTGCTTGATGAGCTGATGAGAAGTTTCGATTTGAAGCATTGGCACAGAAT
GCAAGCTACTAGCTTTTTATGTGCTTCATGTTCTTGAGGATCTTGCTGTGCTGCAAGGTGGTGGTACGTGGAAACAAAGA
TTCATTGTCTTCCAGTTTTGTTTGGAAAATCGTTTCGACATGGTTTTTGTCCTAGTTGGAGATGATACCCTGGTTCTTGC
TCTGTAGATTTGGTATGTCCTGATAAAGAAGTTAACTAA----------TTCACCCTGTGAAGCACTGGAGTCAAGCCTT
GTCAATTTTGGCCCACAATATCTTCTCTAAAAGTCTAGATTAACCTCAGTGATAAATAAAATACAT--------------
----------GTAGATTTTGGTAGTAATTTCCACAGGCTTACACTTAAAT----ATTTACTTTTATCAT---ACATATAA
GATAGTAAAACTAATTGTGAAATATGCTCTAATAGAGGTGCAAAAAC-----------ACCAGCGATAGCAATGGTTTTG
ACACGATAGTTTCTCTACTGACGTCACTGCTCTATTGTGTTTTGGACACAAGATCAAAACGATTGAATGATCGTTCCCTT
ACACAGAAGATTTAGCATTATTCGTTCCAAACACTACTC-TTT-------TTTTTTTTGAAAACCAGGACTTATTGTTAA
ACACTACTCCCTCCGTCCCACAATATAAGACGTAGCTTGCAAAAATGTCTTATATTATGGGACGGAGGGAGTACATCCTA
AATGGTTATGCGTTTGATAGATTCCATCGCCTG-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----AAATTAAAATAGAATTTCATTTTGCTTACTATATGCTGACATAAAAACCAGTGCTCATTTACT-GCTTCACTATG
CCTTGCTCAGCTGCTGAATCCGTGAAGAT-------------GGAAAGCAGAAAATTTGTTAGTCTTTATATACATATAT
AACGATATTTTAGCTGAGTTACCGGTTAATCTGTAGTTTATTTTTTTAACTTAAA
>chr1D_407
TTTTT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------GTGAGACAATTTTTTAATATTTATTATTGTTCACGCACGGGAAGAGATCCACCGGTCCACC---GA
TGCAGAAACGTCGGCCTCCAGATCCATTTCATGCAAAGTTCGGCCCATATAGTAGAGTAACAACAAGAACAGCCG-----
---------------------------AAGCCCCGATGAGATAGTAAGAAACC----------------CTACTAGTACG
CCCACCGATTTCCCGTGTCCCCCCGCAGGCCCGCACCCCGCACGCGCCCTAAAATATCCCAAAGCCCCCCTCCGCCCCCT
CCCGAAGCCGAAATCCCCCAATTCCCCTCTCTCTCTCCCCTCTCCCCATC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GCCCCCCTCCCGCACCCGAGCACGAGAGAATCCGAGGAGAGGAGCGGCGCAAGGAGGCGGAGATGGAGTCGGATC
AGGGCAAGCTCTTCATCGGCGGCATCTCCTGGGAGACGACGGAGGAGAAGCTGCAGGAGCACTTCTCCAACTTCGGCGAG
GTCTCCCAGGCCGCCGTCATGCGCGACAAGCTCACCGGCCGCCCGCGGGGCTTCGGCTTCGTAGTCTACGCCGACCCCGC
CGCCGTCGACGCCGCCCTCCAGGAGCCCCACACCCTCGACGGCCGCACGGTACCTACTCCCCCATCGCTTGGTCTCTTCA
CCCCACCCAAACCCTAGCGGGATATTCGCGTCGAATATTCGCTTCGGCCGCCTTCCGATCTACCCCGCTGCAGCGGCCTA
GGGTTGCGCGTGTGTACTCACGCGTGG---------------------GTTGTGGTTTTGTTGTCTCA---GGTCGATGT
GAAGCGGGCGCTCTCGCGGGAGGAGCAGCAGGCTACCAAGGCGGTGAACCCTAGCGCAGGAAGGAACGCTGGAGGTGGAG
GGGGTGGCGGCGGCGGCGGCGGCGATGCCGGTGGTGCTAGGACAAAGAAGATCTTTGTGGGCGGGCTGCCCTCCAGTCTG
ACAGATGAGGAGTTCCGGCAGTACTTCCAGACCTTCGGAGCTGTCACTGATGTTGTGGTGATGTATGACCAGACAACACA
GCGCCCCCGGGGCTTCGGCTTCATTACCTTTGACTCGGAGGATGCGGTTGACCGTGTGCTGCACAAAACCTTCCACGATC
TTGGAGGGAAGATGGTAGAGGTGAAGCGTGCTCTGCCTCGAGAGGCGAATCCTGGCTCGGGTGGCGGCGGACGTTCCATG
GGAGGTGGGGGTTTTCATAGTAACAATGGACCCAACTCCAATGCTAGCAGCTATGATGGCAGAGGCGATGCTAGCAGATA
TGGGCAGGTGCAGCAAGGCAGTGGTGGCTACCCAGGTTATGGTGCTGGAGCTTATGGCAGTGCTCCAACTGGATATGGAT
ATGGGCACACCAATCCTGGAACTACATATGGAAATTATGGGTCTGCAGGGTATGGAGGTGTTCCTGCTGCGTATGCTGGG
GCTTATGGCAATCCAAGTGCTGCTGCTTCCGGTTACCAGGGTGGCCCTCCAGGCGCTAATAGAGGACCCTGGGGCAGTCA
AGCTCCGTCTGGTTATGGCACTGGGGGTTATGCTGGCAATGCAGGCTATGGTGCATGGAATAGCTCTTCTGCTGGTGGGA
ATGCACCTACTAGTCAGGCACCTGGTGCAGCTGCAGGTTATGGGAACCAGGGCTATGGTTATGGTGGATATGGAGGAGAT
GCATCATATGGTAATCATGGAGGGTATGGTGCTTATGGTGGTCGGGGAGATGGTGCTGGAAATCCTGCTACTGGTGCAGC
CTCTGGGTATGGTGCTGCTGGATATGGAAGTGGGAATGGAAACTCTGGATATCCAAATGCGTGGACTGATCCTTCACAAG
GCGGAGGATTTGGTGGTGCAGTCAATGGAGCTTCTGAGGGCCAATCAAATTATGGCAGCGGTTATGGTGGTATGCAGCCT
AGGGTTGCTCAGTAGAAGAGGCTGTTGTAATGTTCATGGTGTGAACCAGTGCATTTGGGCAGCATATGTATTATTGCAGT
ATTCTGGCTTTGCTCTCGTCTTCCTGAAGGCCATCCATTCTGCCGGTTAAATCAGTATTTCTCCTGGTTGGAATGCTTGA
TCCTTTCGTGGCTTAACTAGAACTTCAGTCAATAAGTAGCTATTATGTCGAGTAGCTGTATCTTCATAATGCTTTATTTA
TGTTTAGCTTATCCTTCGGTGTGCTTTGTCATGAGTGGAGTTTCAGGTTGCTTTATCTCTAGTTTAAAGCTAGAGTAGCT
TCACTGCTTATGGACCAAATTATCTAGTTGTATCTCTATTCTACAGAATCATATATTCGTGTTTGACTGTAGTATTTATG
CTGGATACTCTCTCCCTATTGTG-TTAAGTCTGAAACGTTTATCGCTGGTGGTTGTGTTCATCTCTGGTTCCTTGCTTTG
CTTTAGCTCGCCTTGGAGTTAAGGTGTTACTTTTATTCTTCAAATTTGACGGCTTGCAACAGATGCTAATCCTGAAACTA
TGCACTGATAGAAGCTTGTTACCGTAGCTGCTTCAAACGGACGGTCAAGTGTAGTCCGCTTCTTTATGTAACTGGAATGT
GACATCCTATGTATACATTTG-TTTTGACAAACATTGTTCGTATGCATGATGAAGCTGTGAATATGTTTCAGGGTTAGCG
TCTGATGTTT-GGTATGTAGATTGATAAAACAGGCATAGTAGAGGGAACTGATTAGCCCTTCAAGCCTTTTGGTCTTAAA
TTTT-GCTAGTACGTTTGCAGTGATAAAGAGCTTACTAGCAGCAAGATGGTAGCATCAACTTCTAAGGTAGTGTAGATGC
CAAAAAATCAGTGATGCTACATGATGAATGATGTACAGGTAGAAACCCTAGAGTACAGTAGCGAGGCATTTGGCAAGTAA
AATAATTGTCCTTCCTCCTTCGTTTCGTTTCTGTACAGGTTGCACGTGACGCCATTCTGTGTAAAGAATGTCCAAGTGAG
GGTGAAAATGATATCGGAAATCTGCTGGTTTTGCTTGATGAGCTGATGAGAAGTTGCGATTTGAAGCATTGGCACAGAAT
GCAAGCTACTAGCTTTTTATGTGCTTCATGTTCTCGAGGATCTTGCTGTGCTGCAAGGTGGTGGTACGTGGAAACAAAGA
TTCATTGTCTTTCAGTTTTGTTTGGAAAATCGTTTCGACATGGTTTTTGTCCTAGTTGGAGATGATACCCTGGTTCCTCC
TCTGTAGATTTGGTATGTCCTGATAAAGAAGTTAGCTAATTCACCCTAATTCACCCTGTGAAGCACCGGAGTCAAGCCTT
GTCAATTTTGGCCCGCAATATCTTATCTAGAAGTCTAGATTAACGTCAGTAATAAATAAAATACAT--------------
----------GTAGATTTTGGAAGTAATTTCCACATTCTTACACTTAAAT----ATTTACTTTTATCAT---ACATATAA
GATAGTAAAACTAATTGTGAAATATGCTCTAAAAAAGGAGCAAAAACACCATGGTGCTACCAGCGATAGCAATGGTTTTG
ACACGATAGTTTTTCTACTGACGTCACTGCTCTATTGTGTTTTGGACACAAGATCAAAACGATTGAATGATCGATCCCTT
ACACAGAAGATTTAGCATTATTCATTCCGCACGCTACTC-TTTCTTTTTGTTTTTTTTGAAAACCAGGACTTATTGTAAC
ACACTACTCCCTCCGTTCCACAATATAAGACATAGCTTGCAACAACGTCTTATATTATGGGGCGGAGGGAGTACATCCTA
AATGGTTATGCGTTTGATAGATTCCGTGGCCTG-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----AAAATAAAATAGAATTCCA-TTTGCCTAGTATATGCCGACATAAAAACCAGTGCTCATTTACT-GCTTCACTATG
CCTTGCTCTGCTGCTAAATCCGTGAAGATGAAGATAATAGATGGAAAGCAGAAAATTTGTTCATCTTTATATACTGGC--
------ATTTTAGCTTAGTTACCGGTTAATCTGTAGTTTATTTTTTTA-------
>chr1A_512
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AAAGTTCGGCCCA---AGTAGAGTAGCAACAAGAACACCCAAAAGC
CCCTTATACGAGAAAAAGAACCCCGGAAAGCCCCAATGAGATACTATCAGAAACCCTACTACAGTACTGCTAGTACTACG
CCCACCGATTCCCCGTGTCCCCCCGCAGGACCGCACCCCGCACGCGCCCTAAAATA-----------------------T
CCCGAAGCCGAAATCCCCCAATTCCCCTCTCTCTCTCCC-TCTCCCCATC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GCCCCCCTCCCGCACCCGAGCGCGAGAGAATCCGAGGAGAGGAGCGGCGCAAGGAGGCGGTGATGGAGTCGGATC
AGGGCAAGCTCTTCATCGGCGGCATCTCCTGGGAGACGACGGAGGAGAAGCTGCAGGAGCACTTCTCCAACTTCGGCGAG
GTCTCCCAGGCCGCCGTCATGCGCGACAAGCTCACTGGCCGCCCGCGGGGCTTCGGCTTCGTAGTCTACGCCGACCCCGC
CGCCGTCGACGCCGCCCTCCAGGAGCCCCACACCCTCGACGGCCGCACGGTACCTACCCCCCC-TCGCTTGGTCTCTTCA
CCCCACCCAAACCCTAGCGGTATATTCGCGTCGAATATTCGCTTCGGCCGCCTTCCGATCTACCCCGCTGCAGCGGCCTA
GGGGTGTGCATATCTGGGACGAGGAGTAACTCATGCCTGGGCATCTCTCTTGTGCTTCTGTTGTCTCATCAGGTCGATGT
GAAGCGGGCGCTCTCGCGGGAGGAGCAGCAGGCTACCAAGGCGGTGAACCCTAGCGCAGGAAGGAACGCTGGAGGTGGTG
GCGGCGGCGGCGGCGGCGGCGGCGATGCCGGTGGTGCTAGGACAAAGAAGATTTTTGTGGGCGGACTGCCCTCCAGTCTG
ACAGATGAGGAGTTCCGGCAGTACTTCCAGACCTTCGGGGCTGTCACCGATGTTGTGGTGATGTATGACCAGACAACACA
GCGTCCCCGGGGCTTCGGCTTCATTACCTTTGACTCGGAGGATGCGGTTGACCGTGTGCTGCACAAAACCTTCCACGATC
TTGGAGGGAAGATGGTAGAGGTGAAGCGTGCTCTGCCCCGAGAGGCGAATCCTGGCTCTGGCGGCGGCGGCCGTTCCATG
GGAGGTGGGGGTTTTCATAGTAACAATGGACCCAACTCCAATGCTAGCAGCTATGATGGCAGAGGCGATGCTAGCAGATA
TGGGCAGGCGCAGCAAGGCAGTGGTGGCTACCCAGGTTATGGTGCTGGAGCTTATGGCAGTGCTCCAACTGGGTATGGAT
ATGGGCACACCAATCCTGGAACTACATATGGAAATTATGGGTCTGCAGGGTATGGAGCTGTTCCTGCTGCGTATGCTGGG
GCTTATGGCAATCCAAGTGCTGCTGCTTCCGGTTACCAGGGTGGCCCTCCAGGCGCTAATAGAGGACCCTGGGGCAGTCA
AGCTCCGTCTGGTTATGGCACTGGGGGTTATGCTGGCAATGCAGGCTATGGTGCATGGAATAGCTCTTCTGCTGGTGGGA
ATGCACCCACTAGTCAGGCACCTGGTGCAGCTGCAGGTTATGGAAACCAGGGCTATGGTTATGGTGGATATGGAGGAGAT
GCATCATATGGTAATCATGGAGGGTATGGTGCTTATGGTGGCCGGGGAGATGGTGCTGGAAATCCTGCTACTGGTGCAGC
CTCTGGGTATGGTGCTGCTGGATATGGAAGTGGGAATGGAAACTCTGGATATCCAAATGCGTGGACTGATCCTTCACAAG
GCGGGGGATTTGGTGGTGCAGTCAATGGAGCTTCTGAGGGCCAATCAAATTATGGCAGTGGTTATGGTGGTATGCAGCCT
AGGGTTGCTCAGTAGAAGAGGCTGTTATAATGTTCATGGTGTGAACCAGTGCATTTGGGCAGCATATGTATTATTGCGGT
ATTCTGGCTTTGCTCTCGTCTTCCTGAAGGCCATCCATTCTGCCGGTTAAATCAGTATTTCTCCTGGTTGGAATGCTTGA
TCCTTTCGTGGCTTAACTAGAACTTAAGTCAATAAGTAGCTATTATGTCGAGTAGCTGTATCTTCATAATGCTTTATTTA
TGTTTAGCTTATCCTTTGGTGTGCTTTGTCATGAGTGGAGTTTCAGGTTGCTTTATCTCTAGTTTAAAGCTAGAGTAGCT
TCACTGCTTATGGACCAAATTATCTAGTTGTATCTCTATTCTACAGAATCATATATTCGTGTTTGACTGTAGTATTTATG
CTGGATACTCTCTCCCTATTGTGGTTAAGTCTGAAACGTTGATCGCTGGCGGTTGTGTTCATCTCTGGTCCCTTGCTTTG
CTTTAGCTCACCTTGGAGTTAAGGTGTTACTTTTATTCTTCAAATTTGACGGTTTGCAACAGATGCTAGTCCCGAAACTA
TGCACTGATAGAGGCTTGGTACTGTAGCTGCTTCAAACGGACGGTCAAGTATAGTCTGCTTCTTTATGTAACTGGAATGT
GACATCCTATTTGTACATTCTTTTTTGAGAAACATTGTTCGTATGCATGATGAAGCTGTGAATATGTTTCAGGGTTAGCA
TCTGATG-TTTGGTATGTAGATGGATTAAACAGGCATAGTAGAGGGAACTGATTAGCCCTTCAAGCCTTTTGGTCTTAAA
TTTT-GATAGTACATATGCAGTGATAAAGAGCTTACTAGCAGCAAGATGGTAGCATCAACTTCTAAGGTAGTGTAGATCC
CAAAAAA-CAGTGATGCTACATGATGAATGATGTACAGGTAGAAACCCTAGAGTACAGTAGCGAGGCATTTGGCAAGTAA
AATAATTGTCCTTCCTCCTTCGTTTCGTTTCTGTACAGGTTGCATGTGACGCCATTCCGTGTAAAGCATGTCCAAGTGAG
GGTGAAAATGATATTGGAAATCTGCTGATTTTGCTTGATGAGCTGATGAGAAGTTGCGATTTGAAGCATTGGCACAGAAT
GCAAGCTACTTGCTTTTTATGTGCTTCATGTTCTTGAGGATCTTGCTGTGCTGCAAGGTGGTGGTACGTGGAAACGAAGA
TTCATTGCCTTTCAGTTTTGTTTGGAAAATCGTTTCGACATGGTTTTTGTCCTAGTTGGAGATGATACCTTGGTTCCTGC
CCGGTAGATTTGGTATATCCTGATAAAGAAGTTAA----------CTAATTCACCCTGTGAATCACTGAAGTCAAGCCTT
GTCAATTTTAGCCCGCAATATCTTCTCAAAATGTCTAGGTTAACCTTGATGATAAATAAAAAAATATCTACTCCCTCTGA
TATGGAAGGAGTAGATTTTAGAAATAATTTCGACAAGCTTACACTTGAATATTTATTTACTTTTGTCATCATACATATAA
GATAGTAAAACTAATTGTGAAATATGCTCTAAAAAAAGGAGCAAAACACCATGGTGCTACCAGCGATAGCAATGGTTTTG
ACACGATAATTTTTCTACTGAAGTCACTGCCCTATCGTGTTTTGAACACAAGATCAAAGTGATTGAATGATCGTTCCCTT
AGACAGAAGATTTAACATTATTCACTCCACTTTGTCCTTTTTT-------GTTGTTGAGAAAACCAGGATTTATTGTAAC
ACACTACATCAC------------------------------------------------------------ACATCCTA
AATGGTTAAGCGTTTGATACGTTCCATGCCCTGATTTTTTTTGTGAATAGAAAAAAAATAGGGTGTGTCTAGGGCACATC
TAGATGTGCCCTAGTTATTGCACATCTAAGTGAGTGAATCAAGTAGAAAGAAAAAAGTTAGAAAGAAAAAGAAAATATTC
ATACGAATCTCAACGTAAGATCAATGATATAGGACTTAGATGTGCAATACTTATGGCACATCTAGATGTGCTTTAACAAA
ACTGAAAAAAATAATATAATTTCA-TTTGGCTACTATATGCTGACATAAAAATCAGTGCTCATTAACTTGCTTCACCATG
CCTTGCTCAGCTGCTGAATCCGTGAAGATGAAGATAATAAATAGCAAGCAGAGATTTTTTCCCTCTTTATATACATATAA
T--GATATTTTAGCCTAGTTATTGGTTAATCTGTAGTTTTTTTT-----------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS-S--S-S------S--S---------------------------------S-SSSSSS-S-SSS--
--------SS---S-----------------S-S---S---------------------------------------SS-
-S-------------------S---S------------------------------------------------------
-----------------------------------------------------------------SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS---------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S-----------------S-----------S----------------------------------------------
-----------------------------------------------S---S----------------------------
--------------------S---------------------------------S-------------------S-----
--------------------------------------------------------------------------------
-------------S-----S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------S--S--------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------S-----------------------------------------------
-----------------------S-----------------S-------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S---S-------S-------------S-----------------------------------------------------
---------------S---------------------------------------------S------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
-----------S----------------------------------------------------------------S---
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
---------------------S-------------S--------------------------------------------
--------------------------------S-S---S-----------------------------------------
------------S-------------------------------------------------------------------
-----------------------S-----S--S--------------------------------------------S-S
----------------S--------------S----------S--S---------------S------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S---------------S-----S-------------------------------------------------
-------------------------------------------------------------SS----------------S
SSS------------S--------------------------------SSSSSSS
>forward_562
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------ACAAGAACAGCCAAAGCC
CT------------------------------------------------------------------------------
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-------------------------------------------------------
>reverse_2167
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------ATCTGGTTATGGCACTGGGG------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>forward_1005
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------GCGAGAGAATCCGAGGAGC-----------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------
>reverse_2670
--------------------------------------------------------------------------------
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-----------------------------ACCATCCATTCTGCCGGTTA-------------------------------
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-------------------------------------------------------
>forward_2583
--------------------------------------------------------------------------------
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--GGTTGCTCAGTAGAAGAGGCC---------------------------------------------------------
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-------------------------------------------------------
>reverse_4320
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------A
ACACTACTCCCTCCGTCCC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
