>input_sequence_31821
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-------------------------------------------------------------ATGAAACTAAAGACAAAAC
GACCTGGATGGAAGTCCCTCGTGCCTCTGCAGCTGAGCAGGAAATCCACCATGCGCTTCTTTCTGTTTCCCAAGGTTCAG
GCATCCGGTCAATCCCCAAATGATACTCCGGTTTATCTTAATGTGTATGATTTGACGCCCATGAATGGCTACATATATTG
GGCAGGCCTTGGTATATTTCACTCTGGGATTGAAGGTACTTATCTGTGCCAGATCATCTTTTTTAAGCCAATTTACTATT
TATGCACCAGTTCATTTATTTCT--TTTTCTCATTTCTGTTCGGTTTCGAGTTATAAATCGAACACAACTTCACTGATGC
TATATTATTCACCATTCCTCCTGGATTGTTCAGATCATTCCAACTAGCTCATCACAGCTAATGTTAACAATCAATAAGTT
ACAGCTTACTTTTATGTACCTTTCTCCAGT-AAGTTGTTACTTATTTGACTGTGCATTAAAATAACAAGTAATT-CCCTA
CCTGAACGACATTTCTACATAGTGGAGTGGAGTTCTAGGTAAATAAAAGAGCTTATTCTGACCATCAAA-TTTTGTGATC
GTAATGCGACTACAGGCATCTGTGTCACCAGTATCATAGCAATTTAGCACACAATGCCGCAGGTGTTCAGCTAGTACAGA
TTTTGGCATAGCCTATGTAAGCTCCTACATGTACTCGTATGTGCTACCAGCCTACCACTGCTGTGATTAGCTCATATTGC
TACATTCATGTATAGGCATAGCCTCTGATTTTTTTATTTCTTTTGGCAGCGATAAATATGGGATGGTAGCCTATGTTGTC
CTTTCTACGAAAACTATAAAATGAATGAAATAATCTTAGCATCTCTCTTGATTTTGATGGACCACTCTATATGGCATTAT
GGCTTAGACTTCTATCTTTCTTTCCCAAATGGGTAGCTTAGAAAGGTGAATAAATGAATATGTTTACATATATACATATG
TAGACCCATCTCTTAGGCGTGAAGTAAGGGTCTTCCTGGATCTC---------TTCAGTCCAGTGCCTGCTGTTAGGACA
---------------------------AGAGCTTTTGTTATGTTCAGTTCACTCCAATTTGGTCTGCTTGTGAAAAGGTG
GAACAAGAATTAAGTGAGACCTTTATTCATGTCCTGTAAAACAAAAACAAAGCCTTGCCTATCTCTTCTGTTTTGCCGTC
CTCGTGCAGATCAAATTGGACAACATTTTTGGGAGTAAGATTCCATAACTGATCTGAATAACATTGTAGTCTGATTGCCT
TTTTCCCCCTTG----TGCAGTTCATGGCGTCGAATATGCATTTGGAGCACATGATTATCCCACAAGCGGGGTATTTGAG
GTAGAGCCTCGTCAATGCCCTGGTTTCAGATTCAGGAGATCAATATATCTTGGTACGACGTGCTTAGATCCCATCCAAGT
TAGGCAGTTCATGGAGCTACAGTCAGTAAACTACAATGGAGATTCTTACCATCTCATCATGAAGAATTGCAACCACTTTT
GCAAGGATATGTGTTACAAATTGACCGGCAGCAAAATTCCAAAATGGGTGAATCGGCTCGCCAGAATAGGTACCATACCT
TAATGCAAGCACTAGTGCTTATTATTATTAGTTGTTCAACGGTTTATTCCAAAAGGATAGACGGTTGTGATAATGTTGAG
TGCATCTTAATGTGCATGGTCAGAATGCATTGAGCACTTTGACAGTTACTGCCATCATTCTTGCTGACTGTATTCCATTG
CCACTTTAGTTTCTAGAAATGTAGTTTACCAAATTATTGTGTAAAGCTGTAC--TTTGGGATCACATCATCTGCTAGTGC
AGTTCTGCAGTCTTTACAGCGACAGGACTTGAGACTTTGATAGATCAGGAAAAAGAATATAACACTCCACCAG--AAA-A
AAAGGCAATACATGCCAGTGCACTTGACAGCTGATTTTGTTGCAGCTGAATCATCTGCTAGAGATT---GAGGTCTCAGT
TTTCAGTCTGAAAGGAGCGTGCTAAAATTATGAAATACAGTATGTATTAAACAGGAATTGCGGTAAAAAGCCAAACAGGA
ATTGCATTCAGCATGGGCTAAACTTCCGCACAACATGAAATTCATAACATGTATAGTTCAAGTCCATGGTCTGTGCAGTT
GCATTCCTTGTCCAGATAAAGTCTTTAAAGAAATGGGATTCTTGTCATGTACATTGAATTTATTGCTTGTCATAGAACTT
TGATGTTTTCCTGTGAGGTCCTTAAAAACTCAA-----------------------------------------GTTTAT
CG-TTTTTCCTA---CAGGTGCGATCTGCAACTGCCTCCTCCCGGAGTCTCTGAAGATCTCCCCGGTCGGCCATGATCCA
AACAGCCAGACCGAGGATTCAGAGAAGCGCCGTCTGCGGAACCCGTTGAGCTGTTTCTCCTCCATCTCGAGCCAGAGAGC
GCTTCCCCCGTCTTCTTCCCCTTTCCCTCCATCGCCGGTGAAAGAGCCCCTTGCGAGCTCTTCGTCGAGGAAATCCAGCA
CTGCGTCGCTCAAGAGTAGGTAG---------------------------------------------------------
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>chr4B_1_TraesCS4B01G261700
CGAGCTCTTCTCTGAAATTTGTAGTCAGACTCGATTGCATCAGAACGGCAACTGCAGTATTACCATCCGTGTCAACACCG
TTCATTTACCCTTGGTTGGAGTGAGTGTCACAGTTGGATTTTTTAGGGGGTTTAATTCAGTTTGGTAGTACG--------
AATCGTTGTATTCGTAGCAGTAGTGCAGTTTGTTTACTTGTGCCAAAACAGTTGTTGGAGTTTGGGTGGTCTGTCACGGC
ATTGTCCCTGAAAGCCTGAATTCCTACTTTGCAGTAATGGAATGGAGCGGTACATGGAACCAAAGTTGGTACCTACATAG
CTGGTGCATTGTTGAA-TTTTGTTGCTGCTGTTGCGTGTTT-CCCTGAAGTAATTGTTGCAACTATAGATTGAAGGATCG
TCCGGCATTGTCACCAACTAAATGTTGAAGAATCAAACTCTAATAGAGGGTTTGTATTGTCGCCAACAAAATGTGGAAAA
CCTAATCATTAATAGAGGGTAG--------AGCTAGCTTGAGTACATTTGGTGGGAGTGGGAAACATATCCCATATGTTG
TCTCCCTCATAGTCTTACAACTC---CAAATCAGATCCTCTTAAAAGCTTGTGTGATAACAGCCTGTGG-----------
-------------GAGCAACTCAACTCTGTTCTGTGTGAGCATATTAAGAAGCTCTTAGCACTTTCAAGTAGTTGAGAGG
TCTCAGATTACTACCATACAGCTAAATCTAGTGCCTATGTCGTAGTTAAACCAGCTTAGACGTGCCAAACACATGCTGAA
CTAAGTGCTTTCATATTTCACAAACGTGGGTGGTTTAAATATAGGTACGGTGTACCAAAATTTCAGTTTTCTGCTTTTAT
TTGACAAGTCCTTGGAAGTTAGATTTAGCCTCTTCAAAATGAATCCTTTGTA-ATTTGATCTTTTTGTACCTATTAATTG
TTCCTAATCGTTATTTGTTACAACAAGA----------------------------------------------------
---GATCTTTCTGAACTAGATCGTTCATATATTGATATCTGACTTAATTATGTGAAGGAATATGAAACTAAAGACAAAAC
GACCTGGATGGAAGTCCCTCGTGCCTCTGCAGCTGAGCAGGAAATCCACCATGCGCTTCTTTCTGTTTCCCAAGGTTCAG
GCATCCGGTCAATCCCCAAATGATACTCCGGTTTATCTTAATGTGTATGATTTGACGCCCATGAATGGCTACATATATTG
GGCAGGCCTTGGTATATTTCACTCTGGGATTGAAGGTACTTATCTGTGCCAGATCATCTTTTTTAAGCCAATTTACTATT
TATGCACCAGTTCATTTATTTCT--TTTTCTCATTTCTGTTCGGTTTCGAGTTATAAATCGAACACAACTTCACTGATGC
TATATTATTCACCATTCCTCCTGGATTGTTCAGATCATTCCAACTAGCTCATCACAGCTAATGTTAACAATCAATAAGTT
ACAGCTTACTTTTATGTACCTTTCTCCAGT-AAGTTGTTACTTATTTGACTGTGCATTAAAATAACAAGTAATT-CCCTA
CCTGAACGACATTTCTACATAGTGGAGTGGAGTTCTAGGTAAATAAAAGAGCTTATTCTGACCATCAAA-TTTTGTGATC
GTAATGCGACTACAGGCATCTGTGTCACCAGTATCATAGCAATTTAGCACACAATGCCGCAGGTGTTCAGCTAGTACAGA
TTTTGGCATAGCCTATGTAAGCTCCTACATGTACTCGTATGTGCTACCAGCCTACCACTGCTGTGATTAGCTCATATTGC
TACATTCATGTATAGGCATAGCCTCTGATTTTTTTATTTCTTTTGGCAGCGATAAATATGGGATGGTAGCCTATGTTGTC
CTTTCTACGAAAACTATAAAATGAATGAAATAATCTTAGCATCTCTCTTGATTTTGATGGACCACTCTATATGGCATTAT
GGCTTAGACTTCTATCTTTCTTTCCCAAATGGGTAGCTTAGAAAGGTGAATAAATGAATATGTTTACATATATACATATG
TAGACCCATCTCTTAGGCGTGAAGTAAGGGTCTTCCTGGATCTC---------TTCAGTCCAGTGCCTGCTGTTAGGACA
---------------------------AGAGCTTTTGTTATGTTCAGTTCACTCCAATTTGGTCTGCTTGTGAAAAGGTG
GAACAAGAATTAAGTGAGACCTTTATTCATGTCCTGTAAAACAAAAACAAAGCCTTGCCTATCTCTTCTGTTTTGCCGTC
CTCGTGCAGATCAAATTGGACAACATTTTTGGGAGTAAGATTCCATAACTGATCTGAATAACATTGTAGTCTGATTGCCT
TTTTCCCCCTTG----TGCAGTTCATGGCGTCGAATATGCATTTGGAGCACATGATTATCCCACAAGCGGGGTATTTGAG
GTAGAGCCTCGTCAATGCCCTGGTTTCAGATTCAGGAGATCAATATATCTTGGTACGACGTGCTTAGATCCCATCCAAGT
TAGGCAGTTCATGGAGCTACAGTCAGTAAACTACAATGGAGATTCTTACCATCTCATCATGAAGAATTGCAACCACTTTT
GCAAGGATATGTGTTACAAATTGACCGGCAGCAAAATTCCAAAATGGGTGAATCGGCTCGCCAGAATAGGTACCATACCT
TAATGCAAGCACTAGTGCTTATTATTATTAGTTGTTCAACGGTTTATTCCAAAAGGATAGACGGTTGTGATAATGTTGAG
TGCATCTTAATGTGCATGGTCAGAATGCATTGAGCACTTTGACAGTTACTGCCATCATTCTTGCTGACTGTATTCCATTG
CCACTTTAGTTTCTAGAAATGTAGTTTACCAAATTATTGTGTAAAGCTGTAC--TTTGGGATCACATCATCTGCTAGTGC
AGTTCTGCAGTCTTTACAGCGACAGGACTTGAGACTTTGATAGATCAGGAAAAAGAATATAACACTCCACCAG--AAA-A
AAAGGCAATACATGCCAGTGCACTTGACAGCTGATTTTGTTGCAGCTGAATCATCTGCTAGAGATT---GAGGTCTCAGT
TTTCAGTCTGAAAGGAGCGTGCTAAAATTATGAAATACAGTATGTATTAAACAGGAATTGCGGTAAAAAGCCAAACAGGA
ATTGCATTCAGCATGGGCTAAACTTCCGCACAACATGAAATTCATAACATGTATAGTTCAAGTCCATGGTCTGTGCAGTT
GCATTCCTTGTCCAGATAAAGTCTTTAAAGAAATGGGATTCTTGTCATGTACATTGAATTTATTGCTTGTCATAGAACTT
TGATGTTTTCCTGTGAGGTCCTTAAAAACTCAA-----------------------------------------GTTTAT
CG-TTTTTCCTA---CAGGTGCGATCTGCAACTGCCTCCTCCCGGAGTCTCTGAAGATCTCCCCGGTCGGCCATGATCCA
AACAGCCAGACCGAGGATTCAGAGAAGCGCCGTCTGCGGAACCCGTTGAGCTGTTTCTCCTCCATCTCGAGCCAGAGAGC
GCTTCCCCCGTCTTCTTCCCCTTTCCCTCCATCGCCGGTGAAAGAGCCCCTTGCGAGCTCTTCGTCGAGGAAATCCAGCA
CTGCGTCGCTCAAGAGTAGGTAGCCCGTGTAACTTTTGAAACCAAGTTGGCTAATTCGGGCAGCGGTGCATCTGGTACTG
CCGTCGCAGCTGCCAGTTAATTTTTTTTTTCCTG----TCGGTGTCAGCCTAATGCTTGCTTGTTGATGTTGTTGCTGT-
-TGTTGTATCATGTGATGTAATCCCCGTGGAAAGAGTGTGGCTACAGACGGATGTGATTTGGGTGAAGGAATTCACCTCG
ATTCCACCCGCTCCCTCCCTGTACTCGTGATAGACTGTCGGCCAGATTGGATTTGTATATTAGCCTGC-TCTATTCTTTC
AGTTCTACCTC-------CCCTGTCTCATCGTAC----CCGATATCTTCCTCCTGG-GTCATATCCATGCATGCTTGTGT
TGTCTCATGTGATTTTTC-----ACCTCATCAACTGTAAATTCACTGGTCATTGCTTGGTTCAGTCTACTTCAGCAGCTC
GTAAATCAGGTATCTAGACGTGTTGCCTCTGCTATGGCCATGCTGTTTACCACAGTAGTACATGTGGTTTTCTGAAGG-T
--GGAGCAGTGTAGGCTCTAAATAAAGGCACATGGCAGTGCTCAGTTGAGCAGTGG------CCGGGAGTCAGCAAAGGT
GGCTA---CGCCTACACCGG----------------CGGATCTGCATCTCAGCCAGCCATACAGGTGTAGTGCAGCAACT
GCGCGAGCGAGCGTATAATTCCGCGGAGTGGCGCCGTGCCCACCAAGGA----GAG--GAGAAGGACG--GAGGGAAGGA
CAGCGAGCGTGACAGTTTGCGGGCGCTGAAGGTGGAGCGTAAGAATGTGCTCCC--------------------------
---------------------------------ATCCTACGATGATGCCCCCACGACTAAGCAACGCCAAAGCCAAAGGC
ACCT-----------------------------CTGGCAACCTGCGTACGTTGCATCCCCCACACGGCCACGGCCACGGC
CACGGCGAAGGCGGGCGGGGGCCATAAAGCCGGCGACGGCGACGGGGTTCGACGAGGACGACGAGCGATGGCTCCCTCCA
GA--------CTGTCTGTATGTGCGTTTGTTTTTTCCTCGTCCGTCCGTCCGTGCGGCC
>chr4A_83
--------------------------------------------------------------------------------
--CATTTCCCCTCAGTTGGAGCGAGTGTCACCGTTGTACCTTTTAGGGGGTTTAGTTCAGTTTGGTAGTACCAAACTACC
AATCGTTGTGTTCATAGCACCATAGCAGTTTGTTTACTTGTACCAAAACAGTTGTTGGAGTTTAGGTGATGTGTTACGCC
ACTGTCCCTGAAAGCCTGAATTCCTACTTCGCAGTAATGGAATGGAGCGGTACATGGAACCAAAGTTGGTACCTACATGG
CTGATGCATTGTTGAATTTTTGTTGCTGCTGTTGCGTGTTTGCCCTGAAGTAATTGTTGCGACTGTAGATTGAAGGATTA
TGCGGAACCGTCACCAACCAAATGTTGAAGAATCAGACTCTAATATAGAGTTGCTATTCTCACCAGCAAAATGTGGAAGA
ACTAATATTTGATAGAGGGTAGATCCAGCCAGCTAGGTTGAGTACATTGGGTG----------------CCCATTTGTTT
GCTCTTTCATATAGTCTTTACCCCTTCAAATTAGAGCCTCTTAAAAGCGTGTGTGGTAGCAGCCTGTGCGAGCTACTCAG
CTGCCAAAGGAGTGAGCTACTCAACTCTGTTCTGTGGGAGCATACTAAGAAACTCCTAGCATTTTCAATTAGTCCAGAGA
TTTCAGATTCCTACCATGCAGCTAAATCTAGTGCACATGTTGTAGTTAAGGGAGCTTAGACTTGTTAAGCGCATGCT-AA
CTATTTCCTTTCATATTTCACAAAGGTGGGCGGTTTAACACATT----------------TTTCAGTTTCCTGCTTTTAT
TTTACAAGTCCTTGAAA-TTAGATTTAGCCTCTTCAAAAATAAATAATTCATTATTTAATCTTTATTTAACTTTTAATCG
CCCCTTATTATTTGTGTAGAATGAGAAGTTGTTAAACTACCTCGGGAAAACCATTTCAGAGAAAGTTGACGTTCTCAATT
GTTGATCTTTCTGAACTAGATCCTTCATATATTGATATCTGACTTTATTTTGTGAAGGAATATGAAACTAAGGACAAAAC
GACCTGGATGGAAGTCCCTCGTGCCTCTGCAGTTGAGCAGGAAATCCACCATGCGCTTCTTTCTGTTTCCCAAGGTTCAG
GCATCCGGTCAATCTCCAAATGATACTCCGGTTTATCTTAATGTGTATGATTTGACACCCATGAATGGCTACATATATTG
GGCAGGCCTTGGTATATTTCACTCTGGCATTGAAGGTACTTATTTGTGTCAGATGCATCTTTTTAAGCAAACGTACTATT
TATGCACCAGTTCTTTTCATTCTTCTTTTCTCATTTCTGTTTGGTTTCGAGTTATAAATCCAACACGACTTCACTGATGC
TATATTAGTCACCATTTCTCCTGGATTGTTCAGATCATTCCAACTAGCTCATAACGGCTAATGTTAACTATCAATAGGCT
GCAGCTTACTTTTATGTACCATTCTCCAATCAAGTTGTTACTTACTCGACTGTGCATTAAAATAACAAGTAATCCCCTTA
CCTGAACGACTCATGTCTGCAT---AGTGGAGTTCTAGGTAAATAATAGCGCTTATTTTGACCATCAGGTTTTTGTGGTT
GTAATGCGACTAATGATATCTTTGCCACCAGTATCATAGCAATTTAGCACACGATGCTTCAGGTGTTCATCTAGTACAGA
TTTTGGCATAGCCTATATAAGCTCCATCATGTACTCATATGTG--------CTACTGCTGCTGTTATTAGCTCATATTGC
TACACTCATGTATAGGCATAGCCTCTGATC-TTTTATTTCTTTTGGTAGAGATAAATATGGGATGGTAGCCTATGTTTTC
CCTTCTACGAAAACTATAG-ATGAATGAAATAATCTTTGC--CTCTCTTGATTTTGAGGGACCGCTCTATATGGCATTAT
GGCTTAGACTTCAATCTTTCTTTCCCAAATGGGTAGCTTCGGAAGGTGAATAAATAAATATTTTTACATGTATACATATG
TAGACCCATCTCTTAGACATGAGGTAAGGATCTTCCTGGATCC---------CTTTAGTCCAGTGTCCGCTGCCAGGACA
AGAGGATGGATATTTAGGGCTCTCTCTAGAGCTTTTGTTAGCTTTAGCTTATTCCAATTGGGTCTGCTTGTGAAAAGGTG
GAACAACAATTAA-----ACCTTTATTCAGGTCCTCTAAAACAACACCAAAATCCTACCTGGCTCTTCTGTTTTACTGTC
CTCGTGCAAATCAAACTGGACAAT-TTTTGTGGAGTA------CAGAACTGATCTGAATAACATTGTAGTCTGATTGCCT
TTTTTTTTTCTTCACATGCAGTTCATGGCGTCGAATATGCATTTGGAGCACATGATTATCCCACAAGCGGAGTATTTGAG
GTAGAACCTCGTCAATGTCCTGGTTTCAGATTCAGGAGATCAATATTCCTTGGTACGACGTGCTTAGATCCCATCCAAGT
TAGGCAGTTCATGGAGCTACAGTCAGTAAACTACAATGGAGATTCTTACCATCTTATCATGAAGAATTGCAACCACTTTT
GCAAGGATATGTGTTACAAATTGACCGGCAGCAAAATTCCAAAATGGGTGAATCGGCTCGCCAGAATAGGTACCATAACT
TAATGCAAGCACTAATGCTTATTATTATTAGATGGTCAACTGTTTATTCCAAAAGGATAGGCAGTTGTGATAATGTTGA-
-----------GTGCATGGTCAGAATGCATTGAGCACTTTGACAATTACGGCCATCATTCTTGCTGATTAAATTCCATTG
CCACTTTATTTTCTAGAAATGTAGTTTACCAAATTGTTGTGTAAAGCTGTACTTTTTGTGATCACATCATCTGCTAGTGC
AATTCTGTAATCTTTACAGCGATTGGACTGGAGACCTTGATAGATTAGG-AAAAGAATATAACCCTCCACCACACAAA-A
AAAGGCAATATATGACGGTGCACTTGACACCTGATCTTGTTGCAGCCTAATCATCTGCTAGATATTTGAGAAGTCTCTGT
TTTCA--------------------------------------GTTTT------------------------AAACAGGA
ATTGCATTCAGCATGGGCC-AGCTTCCGCACAACATGAAACTCTGAACATGTAGTTCAACTGTCCATGGTCGGTGTAGTT
TCATTTCTTGTCCAGATAAAGTCGTAGAAGAAATGAGATTCTTGTCATGTACATCAATTATTATTATTTTTGCT------
---TGTTTTCC--TGAGGTCCTTAAAAACTGAC-----------------------------------------TTTTAT
CCCTTTTTCCTA---CAGGTGCCATCTGCAACTGCCTCCTCCCGGAGTCTCTCAAGATTTCCCCGGTCGGCCATGATCCA
AACAGCCAGCCCGAGGATTCAGAGAAGCGCCGCCTGCGAAACCCGTTAAGCTGCTTCTCCTCCATCTCGAGCCAGAGAGC
GCTTCCCCCGTCTTCTTCCCCTTTCCCTCCATCGCCCGTGAAAGAGCCCATTCTGAGCTCTTCATTGAGGAAATCCAGCA
CCGCGTCGCTCAAGAGTAGGTAGCCTGCGTAACTTTTGAGACCAAGTTGGCTAATTCAGGCAGCGGCGGCGCATCTGGAC
GG--------TGCCAGTTAATTTCTCTCTCTCTCT--CTCGGTGTCAGCCTAATGCTTGCTTGTTGATGTTGTTGT--T-
-TGTTGTATCATGTGATGTAATCCCCGTGAAAAGAGTG--GCTAAAGACAGATGTGATTTGGGTGAACGAATTCACCTCG
ATTCCACCCGCTCCCTCCCTGTACTCCTGATAGACTGTCGGCCAGATTGGATTTGTATATTAGTCTCTATCTATTCTTTC
AGTTCAGTCTCCTCTAGTCCCTGTCTCATCGTAC----CTGATATCTTCCTCCTGTTGTCACATCCATGCATGCTTGTGT
TGTC--ATGTGATTTTTT-----ACCTAGTCAACTGTAAAAGCACAGA------------CCAGTCTAGTTCAGCAGTAA
ATCAGCTAGCCTGCCATGTCCA----------------TATGCAGCTCACCG--------CATGTGGTTTTCTGAAAGAT
--GGAGCAGTGTAGGCTCTAAATGAAGGCACATGCCAGTGGTCAGTTGAGCTGAGGTTGAGACCGGAAGTCAGTAAAGGT
GGCTA---CAGGCGTACCACGCCTACGCCGGCGGATCGGATCTGCATCTCAGCCA----TACAGGTGTTGCAGCCGCGCT
------GCGAGCGTACAATTCCGCGGAGTGGCGGCGTGCCCACCAAAGGATAGGAGAAGAGAAGGACGAGGAGGGAAGGA
CAGCGAGCACGACAGTTTGCGGGCGCTGAAAGCTCTGCCCCAGTCTCCAATCTCGTCGTACGTAACGTAGTACAGCTCCA
GGGGGGAGGCACCTCTCGGATAAGAATGCTCCGATCCT---ATGATGCCCCCACGACTAAGCAACGCCAAAGCCAAAGCC
ACGCCCAGCCCCCC---------------------GGCAACCTGCGTACGTTGCGTCCCCCACACGGCCACGGCGGGCG-
---------GGCGGGCGGGGGCCATAAAGCCGGCGACGGCGACGGGGCTCGACGAGGACGACGGTCGATGGCTCCCTCCG
GGCTGTCCGTCTGTCTGTATGTGTGTTTTGTTTCTTCCCGTTCGTCCGTG---------
>chr4D_943
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---GATCTTTCTGAACTAGATCCTTCATGTATTGATATCTGACTTTATTATGTGAAGGAATATGAAACTAAGGACAAAAC
GACCTGGATGGAAGTCCCTTGTGCCTCTGCAGTTGAGCAGGAAATCCACCATGCGCTTCTTTCTGTTTCCCAAGGTTCAG
GCATCCGGTCAATCCCCAAATGATACCCCGGTTTATCTTAATGTGTATGATTTGACACCCATGAATGGCTACATATATTG
GGCAGGCCTTGGTATATTTCACTCTGGGATTGAAGGTACTTATCTGTGCCAGATGCATCTTTTTAAGCAAACGTACTATT
TATGCACCGGTTCTTTTTGTTCTTCTTTTCTCATTTCTGTTCGGTTTCGAGTTATAAATCCAGCACGACTTCACTGATGC
TATATTAGTCACCATTTCTCCTGGATTGTTCAGATCATTCCAACTAGCTCATCACAGCTAATGTTAACTGTCAATAAGCT
GCAGCTTACCTTTATGTACCATTCTCCAATCAAGTTGTTACTTACTCGACTGTGCATTAAAATAACAAGTAATCCCCTTA
CCTGAACGACTCATGTCTGCAT---AGTGGAGTTCTAGGTAAATAATAGCGCTTATTCTGACCATCATG-TTTTGTGATC
GTAATGCGACTACAGGCATCTCTGCCACCAGTATCATAGCAATTTAGTACACCATGCTTCAGGTGTTCAGCTAGTACAGA
TTTTGGCTTAGCCTATGTAAGCTCCATCATGTACTCATATGTG--------CTACCACTGCTGTTATTAGCTCATATTGC
TACAC--ATGTATAGGCATAGCCTCTGATT-TTTTATTTCTTTTGGTAGAGATAAATATGGGATGGTAGCCTATGTTTTC
CCTTCTACGAAAACTATAG-ATGAATGAAATAATCTTAGCCTCTCTCTTGATTTTGAGGGACCGCTCTA-----------
-------ACTTCAATATTTCTTTCCCAAATGGGTAGCTTAGAAAGGTGAATAAATAAATAATGTTACATATATACATATG
TAGACCCATCTCTTAGACATGAAGCAAGGATCTTCCTGGATCTCATTTAATTCTTTAGTCCAGTGTCCGCTGCCAGGACA
AGAGGATGGATATTTAGGGCTCGCTCTAGAGCTTTTGTTAGCTTCAGCTTACTCCAATTGGGTCTGCTTGTGAAAAGGTG
GAACAAGAATTAAATGAGACCTTTATTCAGGTCCTCTAAAACAACACCAAAATCCTACCTGGTTCTTCTATTTTACTGTC
CTCGTGCAAATCAAATTGGACAAT-TTTTGTGGAGTAAGATTACAGAACTGATCTGAATAACATTGTAGTCTGATTGCCT
TTT--TTTTCTTCACATGCAGTTCATGGCGTCGAATATGCATTTGGAGCACATGATTATCCCACAAGCGGGGTATTTGAG
GTAGAACCTCGTCAATGCCCTGGTTTCAGATTCAGGAGGTCAATATTTCTTGGTACGACGTGCTTAGATCCCATCCAAGT
TAGGCAGTTCATGGAGCTGCAGTCAGTAAACTACAATGGAGATTCTTACCATCTTATCATGAAGAATTGCAACCACTTTT
GCAAGGATATGTGTTACAAATTGACCGGCAGCAAAATTCCGAAATGGGTGAATCGGCTCGCCAGAATAGGTACCATAACT
TAATGCAAGCACTAATGCTTATTATTATTAGTTGGTCAACCATTTATTCCAAAAGGATAGGCAGTTGTGATAATGTTGA-
-----------GTGCATGGTCAGAATGCATTGAGCACTTTGACAGTTACGGCCATCATTCTTGCTGATTAAATTATATTG
CCACTTTAGTTCCTAGAAATGTAGTTTACCAAATTGTTGTGTAAAGCTGTACTTTTTGTGATCACATCATCTGCTAGTGC
AATTCTATAGTCTTTACAGCGATTTGACTTGAGACCTTGATAGATTAGG-AAAAGAATATAACCCTCAACCACACAAAGA
AAAGGCAGTATATGACAGTGGTCTTGACACCTGATCTTGTTGCAGCCTAATCATGTACTAGAGATTTAAGAAGTCT--GT
TTCCAGTCTCAAAGGAGCACTTTAGATGTAGTATTGAGATACTGTTTT------------------------AAACAGGA
ATTGCATTCAGCATGGGCC-AACTTGCGCACAACATGAAACTCTGAACATGTAGTTGTG-AGTCCATGGTCTGTGCAGTT
ACATTCCTTGTCCAGATAAAGTCTTTAAAGAAATGAGATTCTTGTTAC--ACATCAAATTTGTTACTTGTCATAGCATTT
TGGTGTTTTTC--TGAGGCCCTTTAAAACTGTTTTTATCCCTTCTCCTACAGTTTGCAGATTAAAAACTATTTTTTTTAT
CCCTTTTCCTACACGCAGGTGCCATCTGCAACTGCCTCCTCCCGGAGTCTCTGAAGATCTCCCCGGTCGGCCATGATCCA
AACAGCCAGCCTGAGGATTCGGAGAAACGCCGCCTGCGAAACCCGTTGAGCTGCTTCTCCTCCATCTCGAGCCAGAGAGC
GCTTCCCCCGTCTTCTTCCCCTTTTCCCCCATCGCCCGTGAAAGAGCCCATTCCGAGCTCTTCATCGAGGAAATCCAGCA
CCGCGTCGTTCAAGAGTAGGTAGCCCGTGTAACTTTTGAACC--AGCTGGCTAATTCGGGCAGC---GGCGCATCTGGAC
GG--------TGCCAGTTAATTTTTCTCCTTCTCTCTCTCGGTGTCAGCCTAATGCTTGCTTGTTGATGTTGTTGT--TG
TTGTTGTATCATGTGATGTAATCCCCGTGAAAAGAGTG--GCTACAGACAGACGTGATTTGGGTGAGCGAATTCACCTCG
ATTCCACCCGCTCCCTCCCTGTACTCGTGATAGACTGTCGGCCAGATTGGATTTGTATATTAGTCTCC-TCTATTCATTC
AGTTCAGTCTC-------CCCTGTCTCATCATACGTACCTGATATCTTCCCCCTGG-GTCATATCCATGCATGCTTGTGT
TATC--ATGTGATTTTTTCTTTTACCTAGTCAACTGTAAAAGCACAGA------------TCAGTCCAGTTCAGCAGTAA
ATCTGCTAGCCCGCTATGTCTA----------------CATGCAGTTTACTAC----GTACATGTGGTTTTCTGAATATG
GAGGAGCAGTGTAGGCTCTAAATAAGAGCACATGGCAGTGCTCAGTTGAGGTGAGGT------CGGAAGTCAGTAAAGGT
GGCGGCTGCACGCGTACCACGCCTGCACCGGCGGATCGGATCTGCATCTCAGCCA----TACAGGTGTAGCAGCTGCGTT
------GCGAGCGTACAATTCCGCGGAGTGGCGGCGTGCCCACCAAAGGATAGGAG--GAGAAGGACGAGGAGGGAAGGA
CAGCGAGCGTGACAGTTTGCGGGCGCTGAAAGCTCTGCCCCAATCTCCAATCTCATCGTACT--ACGTAGTACAGCTCCA
GGGGGGAGGCACCTCTCGGATAAGAATGCTCCGATCCTACGATGATGCCCCCACGACTAAGCAACGCCAAAGCCAAAGCA
TGGCCAGCAGCAAAGGCCGCCACCCCTCTGGTACTGCTAACCTGCGTACGTCGCGTCCCCCACGCGGCCAC---------
---------GGCGGGCGGGGGCCATAGAGCCGGCGACGGCGACGGGGTTCGACGAGGACGACGGTCGATGGCTCCCTCCG
GGCTGTC----TGTCTGTATGTGTGTTTTGTTTTTTCCCGTTCGTCCGTCCGTGCGGCC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS-----S----SS-------S---------S----S-SS--------------S----------------S--------
---------S---S-----SS-SS-----------------S---------------------S----S-S---S---S-
-S---------------------------S------------------------------------------------S-
---S--------------------------------------------------------S---S-------------SS
-S---S-SS---------S----------------S---------S--S---SS----S--S---S------------S-
S-----SS--S-------------------------S-----------S----SSSSSSSSSSSSSSSS-----S----S
S---SS-----SSS-SSSS--S---------S---S------------S------S--S---------S-----------
-----------------S------------------S-------S------S---S-----S------S----SS----S
-S-------S-------S----------------SS----S--------SSS---------S--SS--S-S------S--
---SS-S-----------------S-----S-------SSSSSSSSSSSSSSSSSSSSSS---------S----------
--S-----------S--S---------------------SS--SSSS--SSS-----S------S-S--S--S-----S-
SS---S--SS--SS-SSSS-SSSSS-SS----------------------------------------------------
----------------------S----------------------S-------------------------S--------
--------------------------------S-----------------------------------------------
--------------------------------------------------------S-----------------------
------------------------------------------------------SSSSS---------S--SS-------
-------------S---SS-----------------------------------------S-----S-------------
-------S--------S---------------------------------------------------S---------S-
S-------------------S-------S---------------S-S--------------------------S---S--
----------SSS-S-SSSS-SSSS---------------------S--S-----------------SS-----------
---------------------S--S---------------------------S----SS---------------------
-------------------------SS---------S------SSSSSSSS-------------S---------------
----S-------------------------S---------------S--S---------------------------S--
-S----------------SS--------------------S----------------S-----S----------------
------------S------------------------------------------S-----S------------------
----------------S-S----------S-------------------------S---------S-S----SS------
----------------------------------------SS-----S-S---------S--------------------
-------------S---------------S-----S--------S-S----SS-S-S---SS------------S-S---
--------S--------------SS----SS-----------S--S----------------------------------
----SSSSSS-S--------------------------------------------------------------------
-----S----------------------------------------S---------------------------------
------------------------------------------------------S-------------------------
-----------------------------------------------------------------------------S--
--------------S-------------------S-----S-------------------S-S----------------S
SSSSSSSSSSS--------------------------------------S-----------------S-SS---------
-----------------------------------S----------------------S---------------------
-S-----S--------------SS-----------S---------S---S-------------S--------S-------
----------S---S--------------S-----S----------SS-----------------------S-----S--
---------S--------SSSS--S-SS--SS-SSS-S-SSS---S--SSSSSSSSSSSSSSSSSSSSSSSS--------
------------------SS--------------------S--SS--------SSSS-SS--------------------
S----------------------------------S------------------SS-----S--S----------S-S--
--S--------SS-----------------S-S-----------------------------------------S-----
-S--------------------S---------------------------------------------------------
---------S----------------------S-----S--------------S--------------------------
------------------------------------S------------S--S----------S----------------
-S----------------------------------------------------------------S-SSS-SSS-SSSS
SSSSSSSSSS---------------S-S--S--S-----------------------------------------SSS--
-----------------------------S--------SS---------S-----------------S------------
---------------------------------------------------------------S--S-------------
-----SSS-------------------------------S----------------------------------------
----SS-----------S---------SS-----------SS---S-SSSSSSSSSSSSS--------S--------SSS
S-S-SSS--SSSS---SSSS-SSSSSSSSSSSSSSSSS-----S---------SSSS-------------------S---
---------------------------------------------------S-S------------S------S------
---------S-SSSS---SS-----------------------------------SSSS-----------SSSSSSSS--
SSSSSS---------S-----------------S------------S-S-------------------------------
------------------------------S-SSSS--SSS--SS-SSSS--S---------------------------
------------------------------------------------------------------------------S-
--SS--------------------------------------------------S-------------------SSSS-S
SSSSSSSSS------------------------------------------------------SS--------------S
-S---------------------S----SS-----S-S---S-----------------
>forward_80
------------------------------------------------------------TACCATCCGTGTCAACACCG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------
>reverse_1809
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------AGCCTACCACTGCTGTGATT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_406
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------AGATTGAAGGATCG
TCCGGC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>reverse_2409
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------CTTGTGCAGTTCATGGCGTC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_789
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------ACCAGCTTAGACGTGCCAAA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>reverse_2412
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------GTGCAGTTCATGGCGTCGAA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------
>forward_791
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CAGCTTAGACGTGCCAAACA---------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>reverse_2527
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ATCTTGGTACGACGTGCTTAGA------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>forward_2154
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------CAGTCCAGTGCCTGCTGTT------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------
>reverse_4195
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TGGCCATGCTGTTTACCACA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
