>input_sequence_31814
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----------------------------------------ATGGTCTTCGCCGCGCCGGCAGGGGTGGGAGGCGGCCCCC
TCTCCGTCGCTCCCCCCGCCTCCAGCTCGGCCCCCTTCCTCCTCCGCGCCGGCGGCGACTCGCCGCAGCGCGGGATGCTC
CGCCGCCTCACCTTCCCACGGAGAGGAGGCGCCAGGGTAAGCTCCGCACCCGGCCAGCTCTCGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCGTTGCTTCCCCCCTTCTCCCCCCATGCTCCT
AATCTTGAT---TAGATTACTGTCATGACCCCTCGTTCGATTCTTCTCGACACTCTAAGAGCAAGACTACTGTCATTTTC
GTCCTTTGGTTTCAGTCACAGAAAGGAACTTCTGTGTTGGG-----GTTACAGCAGCTCTGTGTCTAGATTAGACTGTAT
CGTACCATCATTCTAGATTTCAGTAGTCCTGTCCAGCTTTTGTAGATGTTTGATTTGATTTTGGTGCGGTGTAGTGACTG
TATTTACATATGTGACTACTAGGGACAGAGCCAGAGAAGATGGGATTGCCACATAACTCGCTGTGCCGGCAAGGCGAATG
TGGTGACCGAGGATGATACGGCGAAAGTTGCTGCTGCTGATGCCACCGCAGACCAAGCTGCCGATG---------ATACC
GCCGATGTGCTCGAGTCCTTGAACCCTGACGACGACGTTGATTCAGTTGCCTGGATAAAGCAGCAGCCCCTCCCTTATCC
TGCAGTAAGTACACAAG---AAGTAATGATTCACAAACATTGGTGCCGGGAATGGGGTGACGAACAACGGGTTGTAATCA
ATGCAGGATGCTCTGGAGCCGTACATAAGCAAGGAGACGGTGGAGCAGCACTGGGGAGTTCACCAGCGCATGCATGTGGA
CAGGCTCAACGGCATGATCGGCGGCAGCGAGTGGGAGCGGATGTCGATTGGGCAGATGATGCTCGCCTCATTCAACGAGG
GCAGGGAGCCACCCCACGCTCCCTTCTTCCATGCCGCACAGGTAGCATTCCATGCTGTTTGGAA-----------GGCTT
GTATATGCTTTAGATCCCTGATTCTT-GGCCATGTTATGTAGGTATGGAACCATGATTTCTACTGGCGATCGATGAAACC
TGGCGGTGGAGGCAAGCCCCCGGAACGTCTTCTGAAGTTTATTAACAGGGACTTCGGATCCTATGACGGCATGATCAAAC
AATTCATGGATGCGGCATTAACTCAGTTCGGTTCTGGATGGGTTTGGCTTTCTTGTAAGTGATGCTAAAACCCACATTTG
TTAGCTGCG-TGTATCAGTTTCAAAACTTGCTCCA-------------TGATGAACTGAACTCTGCTCTGTAACTGGTTC
TAGACAAGGGGAGCAAGTTACCTCATGTGAAGTCAAAAAGCCCAATCCCATCTGACAATTATGGTAGGCTGGTCATCTCA
AAGTCTCCGAATGCTATCAACCCTCTTGTCTGGGGCCACTCTGTGAGTATTTACCTGCAACTGTTTTCCCCTGTATCATC
ATGCAGTGTATACTGTGCACTACTTCGTTTTGGAAGCTTTGTATTGCCTCTTTCTATTTGTTCCGTTGACAAGAAAATAT
----------------------------------TTTCATTTAAAAATAAATCTATTGTCTGTCTCCCCCATGCATACTA
TATATTCTACAGTGATCTGATATTTTTATCTGTCTATTCTTGTTGGCAGCCACTCCTTGCGATTGATGTTTGGGAGGTAT
GTATGCATATTTCATTTTCATTTCCATGCA--TTTTCCTTCATAAAAGTTAACTCTGCTAACCAATTCTCTGTCTTGGGA
ACAGCATGCCTACTACCTGGATTATGAGGTTAGATGCCAATGTGGTGTTCATGATTTCTAGTGGTTATATTTTCCATATG
CGCCACTTAGTTTGTTCTTGTTACATGGCTGCAGAATCGAAGGGCTGAGTATGTCTCTGCA-------------------
-GTTCTAGAGAAGCTCGTGTCATGGGAAATGGTGGAGTCCAGGCTCCGGAAAGCTGTTCTGCGAGCAATAGAAAGAGACG
GTCACACCAGCCCGAAGCAGCGAAGGAAGCAACTTGTGTCCCAGGCTAAAGGCCGCGTCGGGGATGCAAGCACCAGCGGT
GAGGCAAGACGGCGACCGAGAAGTAAGGATCAGCAGGCCCCTTCCAGCGTGACAATGGTGCCAGCAGGCGAGGCGGTACC
GAACTGA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------
>chr7D_1_TraesCS7D01G043000
GTCGCCTAGGCAAAACAACTGGAGGGAATACAGATTGTCCTCCAGCAGACGGAACTTGACGTCATGAGCTAGATCCCATG
CAGCCCGCATGTTCTTGAAAAACCAGGTTTGGCTATAGGGTTTATCGATGTGAACCCTAGCCAGCGCCACCCACCTTGCA
GCATCTGGCGGCGCATCCTTCTCGTCGTACACCACATCATCAAGATCCTCCTCCCGCATGCCAAGCTTGGCCATCATCCT
TTCCAGTTCGGTAGCAGTGTTCGGTCCCGAAGACCCAGATCCATCTGCTGCCATAATCAAAGAAACTTGCCCGAGGAAAC
TCAGATCGGGCGATAAGCTAGGGAGGGAACCCTATCTCTCTTTTCTTCCCAGGACACCGATCAGGGTCGCTCGGCCCTAA
TCCTTCAGTCAAGGGAGATCGGAGGAGGGAATGTCAAGAAAACTCGACGGCGGCGGCAGAGTCGCCTCCGGGAAAACCAA
AACCCTAACTAGAGGGAACAATCGGCCATCCTAAGTACCATCTTCACCAACTTTTTTTTTTGAGCGGTAAACCAAACTTT
ATTGATTAGTGTTTCGGTTTACAGGGATAACAAAAGGGTCATGGGGTACTCCCAGCCACATATGGCGCCCTTGTTCTAGA
GAAGTACAAAATTTGACTAAATTATGAGCATCAACATTCCCTTGCCGATCTTCGAAAATGAAATCACACCGAGAAAATTG
TCTTGCCTGGGCCTGGATCTCCTTGATAACAATGCTAGGGTTCCTCGATTTGGTGATCGATTGAGCGAGCCGCTCGGACC
TGAGAGTGCTTGTTCGCTCGGCCTGTTCGAAGACACAATGGGCTTCGTTTGTCACAGCTTCAGGCCCATCTGAGCCTACC
AAGAAGCAACAACAACAGTCCACAACCCAAACCCAAACCCCTATCCCCTCCTCTGCTCCTCCCCCCACTCTCGGTCAGTC
ACCTCCTCCTCTCCCGAAGCTCGCGTCCGTCCGTCCGTCCATGGTCTTCGCCGCGCCGGCAGGGGTGGGAGGCGGCCCCC
TCTCCGTCGCTCCCCCCGCCTCCAGCTCGGCCCCCTTCCTCCTCCGCGCCGGCGGCGACTCGCCGCAGCGCGGGATGCTC
CGCCGCCTCACCTTCCCACGGAGAGGAGGCGCCAGGGTAAGCTCCGCACCCGGCCAGCTCTCGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCGTTGCTTCCCCCCTTCTCCCCCCATGCTCCT
AATCTTGAT---TAGATTACTGTCATGACCCCTCGTTCGATTCTTCTCGACACTCTAAGAGCAAGACTACTGTCATTTTC
GTCCTTTGGTTTCAGTCACAGAAAGGAACTTCTGTGTTGGG-----GTTACAGCAGCTCTGTGTCTAGATTAGACTGTAT
CGTACCATCATTCTAGATTTCAGTAGTCCTGTCCAGCTTTTGTAGATGTTTGATTTGATTTTGGTGCGGTGTAGTGACTG
TATTTACATATGTGACTACTAGGGACAGAGCCAGAGAAGATGGGATTGCCACATAACTCGCTGTGCCGGCAAGGCGAATG
TGGTGACCGAGGATGATACGGCGAAAGTTGCTGCTGCTGATGCCACCGCAGACCAAGCTGCCGATG---------ATACC
GCCGATGTGCTCGAGTCCTTGAACCCTGACGACGACGTTGATTCAGTTGCCTGGATAAAGCAGCAGCCCCTCCCTTATCC
TGCAGTAAGTACACAAG---AAGTAATGATTCACAAACATTGGTGCCGGGAATGGGGTGACGAACAACGGGTTGTAATCA
ATGCAGGATGCTCTGGAGCCGTACATAAGCAAGGAGACGGTGGAGCAGCACTGGGGAGTTCACCAGCGCATGCATGTGGA
CAGGCTCAACGGCATGATCGGCGGCAGCGAGTGGGAGCGGATGTCGATTGGGCAGATGATGCTCGCCTCATTCAACGAGG
GCAGGGAGCCACCCCACGCTCCCTTCTTCCATGCCGCACAGGTAGCATTCCATGCTGTTTGGAA-----------GGCTT
GTATATGCTTTAGATCCCTGATTCTT-GGCCATGTTATGTAGGTATGGAACCATGATTTCTACTGGCGATCGATGAAACC
TGGCGGTGGAGGCAAGCCCCCGGAACGTCTTCTGAAGTTTATTAACAGGGACTTCGGATCCTATGACGGCATGATCAAAC
AATTCATGGATGCGGCATTAACTCAGTTCGGTTCTGGATGGGTTTGGCTTTCTTGTAAGTGATGCTAAAACCCACATTTG
TTAGCTGCG-TGTATCAGTTTCAAAACTTGCTCCA-------------TGATGAACTGAACTCTGCTCTGTAACTGGTTC
TAGACAAGGGGAGCAAGTTACCTCATGTGAAGTCAAAAAGCCCAATCCCATCTGACAATTATGGTAGGCTGGTCATCTCA
AAGTCTCCGAATGCTATCAACCCTCTTGTCTGGGGCCACTCTGTGAGTATTTACCTGCAACTGTTTTCCCCTGTATCATC
ATGCAGTGTATACTGTGCACTACTTCGTTTTGGAAGCTTTGTATTGCCTCTTTCTATTTGTTCCGTTGACAAGAAAATAT
----------------------------------TTTCATTTAAAAATAAATCTATTGTCTGTCTCCCCCATGCATACTA
TATATTCTACAGTGATCTGATATTTTTATCTGTCTATTCTTGTTGGCAGCCACTCCTTGCGATTGATGTTTGGGAGGTAT
GTATGCATATTTCATTTTCATTTCCATGCA--TTTTCCTTCATAAAAGTTAACTCTGCTAACCAATTCTCTGTCTTGGGA
ACAGCATGCCTACTACCTGGATTATGAGGTTAGATGCCAATGTGGTGTTCATGATTTCTAGTGGTTATATTTTCCATATG
CGCCACTTAGTTTGTTCTTGTTACATGGCTGCAGAATCGAAGGGCTGAGTATGTCTCTGCA-------------------
-GTTCTAGAGAAGCTCGTGTCATGGGAAATGGTGGAGTCCAGGCTCCGGAAAGCTGTTCTGCGAGCAATAGAAAGAGACG
GTCACACCAGCCCGAAGCAGCGAAGGAAGCAACTTGTGTCCCAGGCTAAAGGCCGCGTCGGGGATGCAAGCACCAGCGGT
GAGGCAAGACGGCGACCGAGAAGTAAGGATCAGCAGGCCCCTTCCAGCGTGACAATGGTGCCAGCAGGCGAGGCGGTACC
GAACTGAGCCATGTGCCCGTGAGGTTGGTGGCCAG----TAGCACGGGCAGGCAGCTAGAGCAGCATGTCCAAAATCCTC
TAGAACAGTAGTCTCTGAAGAACGCGTGCACCACCCCACTTCCGTTCGTGC----------GACCGTTGTAGCATGATTT
GCACGCCGCAGTTTTTGTCAATCTTAGTCTAATAGGAGTACTGTAGCATGCCTGTACCACTTGAGCAAGAATCAGCAATG
CTGGATAGGCTAAATTTTGGTAAGTAGCCTCAGGGTTTGATGTCCCGTAATGTATTGGTGTGGAGATAGGCTTAGGAGGT
GGGCACTTGTGTGGGAATCTGGTCTTATGTGAACTTGCTAGAAGATGAAGTACAGTTTTTGTCCCTTCCTTTTTGAATCA
TTAATAAGTATCAGCGGTTTCATGCTCACAAGGTTGCTGTACAGAGTTCAACTGAGAAGATGATTCATTTGGTTCATCTC
TATCTATCTATCTTTTTTTTTATTACTGTGGATTGCTTACCACATATGTTACCGATTCAATTGTTAGATTATCGACAATT
TCGATGATACATGCCTCCAGCTCGGAGTGCTAATAGACTAGCCACACACAAGATTGCCTCAACCGGACCCTTGCAACGTA
CTCCCCCGTTTTTATTTACTCCGTAATTAGGTTTGCCTAAAGTTAAATTTTATATACTTTTAACAAGTTTGTAGAAAAAT
ATATAAACATATACACCACTACAAAAAGAATGTGATTAGTGTCTTGTGGGCTGCCGCATGGGGCGCAACAACAGTTGCTC
GGTCCTCAACGCTTCTGAAGGTTGATCACGGAGGGAAAGCGATCAAGGGAAGCTTGCCAGAGAAAGATTCACACTTTTCG
AGGTACTCTCATCGCCCACAAGTCTATAGCATAATACACTTTTGGGCGTGGACCAGTTTAGTGTATAAAGATTTGATCGA
GAACACCCCAGAGGCCTCCAGGTCACACCTAAAGTGGCGGCCAACAGACTGAAACTGGTTC
>chr4D_535
TTTTTT--------------------------------------------------------------------------
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--------------------------------------------------------------AGCGGTAAACCAAACTTT
ATTGATTAGTGTTTCGGTTTACAGGGATAACAAAAGAGTTATGGGGTACTCCCAGCCACATGTGGCGCCCTTGTTCTAGA
GAAGTACAAAATTTGACTAAATTATGAGCATCAACATTCCCTTGCCGACCTTCGAAGATGAAATCACACCGAGAAAATTG
TCTTGCCTGGGCCTGGATCTCCTTGATAACAATGCTATATCTCCCTTCCGTCCCACTCTTAATTTCCTCCACAACGGTTT
TGCAATCAC-----------------------------------------------------------------------
---AAGCAACAACAATCTGATCTA--------------------------------------------------------
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--------------------------AATTTAGATCCTGAGCTAGGGCTAGAGCCTCGCGGCAAGCCAACGC--------
------------------------------TTCCAGCATCGGTGGATCGTCAG------TCTTGTAAACTGAAGGT----
--------------------------------------------------------------------------------
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--------------------------------------------------------------CTGTAGATCGATCCTGCA
TGGAGGCATACC--------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------TTTTTTTTTCTTTTCAGAAAGAGAACC
ACGAAAGAGAGAAGTGCCCCTTCTCCATTGATGATTTTATTTAGATACACTCCCCAATTT--------------------
--------------------TATTTTTAAATGTTTATTA----------------------AGTTTTTTTTGAGACATTT
AAGTGCTTATTAA-------------------------------------------------------------------
--------------------------------------------------------------GGTTTTTTTAGCGGTAAA
CCAAACTTTATTGATTAGTGTTTCGGTTTAGAGGGATAACAAAAGAGTTATGGGGTACTCCCAGCCACATGTGGCGCCCT
TGTTCTAGAGAAGTACAAAA------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------TTTGACTAA
ATTATGAGCATCAACATTCCCTTGCCGACCTTTGAAGATGAAATCA----------------------------------
--------------------------------------------------------------------------------
------------------------------------------CACCGAGAAAATTGTCTTGCCTGGGCCTGGATCTCCTT
GATAACAATGCTA-------------------------------------------------------------------
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-------------------------------------------------------------
>chr7A_853
CACG----------------------------------------------------------------------------
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--------------------------------------------------------GCTTCAGGCCCATCTGAGCCCACC
GAGAAGCAACAACA---GTCCACAACCCAAACCCAAACCCCTATCCCCTCCTCTGCTCCTTCCCCCACTCTCGGTCAGTC
ACCTCCTCCTCTCCCCAAGCTCGCGA--------CCGTCCATGGTGTTCGCCGCGCCGGCAGGGGTGGGAGGCCGCCCCC
TCTCCCTCGCTCTCCCCGCCTCCAGCTCGGCCCCCTTCCTCCTCCGCGACGGCGGCGACTCCCCGCAGCGTGGGAGGCTG
CGCCGCCTCACCTTCCCACGGAGAGGAGGCGCCAGGGTAAGCTCCGCACCCGGCCAGCTCTCG-----------------
--------------------------------------------------------------------------------
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--------------------------------------------------TTGCTTCCCCC---CTCCCCCCATGCTCCT
CATCTTGAT---TATATTACTGTCATGACCCCTCGTTCGATTCTTCTCGACACTCTAAGAGCAAGATTACTGTCATTTTC
GTCCTTTGGTTTCAGTTACAGAAATGAACTTCTGTGTTGGA-----GTTACAACAGCTCTGTGCCTAGATTAGAATGTAT
CGTGCCACCATTCTAGATTTCAGTTGTCCTTTCCAGCTTCTGTAGATGTTTGGTTTGATTTTGGTGCGGTGTAGTGACTG
TATTTACATATGTGACTAGGGAGATAGCCGGGGG---AGATGGAATTGCCACATAACTCGCTGTGCCGGCGAGGCGAATG
TGGTGACCGAGGATGATACGGCGAATGTTTCTGCTG---ATGCCGCTGCGGACAAAGCCGCCGATGCCATCGGCGATGGC
GCGGATGTGCTGGAGTCCTTGAACCCTGACAATG---CTGATTCAGTTGCCTGGATAAAGCAGCAGCCTCTCCCTTATCC
TTCAGTAAGTAC---AG---AAGTAATGATTCACAAACATTGGTGCCGGGAACGGGGTGACGGACAACGGGTTG----CA
ATGCAGGATGCTCTGGAGCCATACATAAGCAAGGAGACGGTGGCGCAGCACTGGGGAGTTCACCAGCACATGCACGTGGA
CAGGCTCAACGGCATGATCGGCGGCAGCGAGTGGGAGCGCATGTCGATTGGGCAGATGATGCTTGCCTCGTTCAACGAGG
GCAGGGAGCCACCCCACGCTCCCTTCTTCCATGCCGCACAGGTAGCATTCCATGCTGTTTCGAACCATCCTTTGTGGCTT
GCGTATGCTTGAGATCCCTAATTCTTGGGCCATGTTATGTAGGTATGGAACCATGATTTCTACTGGCGATCGATGAAGCC
TGGCGGTGGAGGCAAGCCCCCCGAACGGCTTCTGAAGTTTATAAACAGAGACTTCGGATCCTATGACGGCATGATCAAAC
AATTCATGGATGCCGCGCTAACTCAGTTCGGTTCTGGATGGGTTTGGCTTTCTTGTAAGTGATGCTTAAACCCACATTTG
TTAGCTGCG-TGTACCAGATTCAAAACTTGCTCCATGTGGTGTGAATGTGCTGGACTGAACTCTGCTTTGTAACTGGTTC
-AGACAAGGGGAGCAAGTTACCTCATGTGAAGTCAAAAAGCCCAATCCCATCTGACAACTATGGTAGGCTGGTCATCTCA
AAGTCTCCAAATGCTATCAATCCTCTTGTCTGGGGCCACTCTGTGAGTATTTACCTGCAACTGTGTTTCCCTACATAATC
ATGCAGTGTATACCATGTAC----TTATTCTTGAAGCTTTGTATGGTTTCTTGTTATTTGTTCCTTTGACAAGAAAATAT
----------------------------------TTTTATTTAAAATCTGT---------TGTCTCTCCCATGCATAT--
TATATTCGACAGCGATCTGATATTTTTATCTGTCTATTCTTGTTGGCAGCCACTCCTTGCGATTGATGTTTGGGAGGTAC
GTATGCACATTTCATATTCTTTTCCATGCA--TTT-CCTTAATAAAAGGTAACTTTGCTAACCAATTATCTGTCTTGGGA
ACAGCATGCCTACTACCTGGATTATGAGGTTAGATGTCAA--TGGTGCTCATGATTTCTAGTGGTTATACTTGCCATATC
CGCTACTTAGTGTGTTCTTGTTACATGACTGCAGAATCGAAGGGCTGAGTACGTCTCTGCA-------------------
-GTTCTAGAGAAGCTCGTGTCATGGGAAATGGTGGAGTCCAGGCTCCGGAAAGCTGTTCTGCGAGCAATAGAGAGAGACG
GCCACACCAGCCCGAAGCAGCGAAGGAAGCAACTTCTGTCTCAGGCTAGAAGCCGCGTTGGGGATGCAAGCACCAGCGGT
GAGGCAAGAAGGCGACCAAGAAGTAAGGATCAGCAGGCCCCTTCCAGCGTGACAATGGTGCCAGCAGGCGAGGCAGTACC
GAACTGAGCCATGATCCCATGAGGTTGACAACCAG----TAGCACGGGTAGGCAGCTAGAGCAGCATGTCCAAAATCCTC
TAGAATGGTAGTCTCTGAAGAACGTGCGCATCGCACTACAGGCGTCACTTTGCTTCCTGCTGACCGTTGTAGCACGATTT
GCATGCGGTAGTTTTTGTCGATGTTTGTCGAACAGGAGTGTATTAGTATCTCTGTACCGCTTGAGCAACACGCAACAATG
CTGGATAGGCTGAATTTTGGTAAGTAGCCTCAGGGTTTGATGTCC-----TGTATTTGTTTAGAGATAGGCTTAGGAGGT
AGGCACTTG----GGACTCTGGTCTTTGTAGAA-----------------------------------------------
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>chr4A_922
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-----------------------------------------TATCCCCTCCTCTGCTCCTCCCCCCACTCTCGGTCAGTC
ACCTCCTCCTCTCCCCAAGCTCGCGTCCGTCCGTCCGTCCATGGCGTTCGCCGCGCCGGTAGGGGTGGGAGGCGGCCCCC
TCTCCCTCGCCCTCCCCGCCTCCAGCTCGGCCCCCTTCCTCCTCCGCGCCGGCGGCGACTCCCCGCAGCGTGGGAGGCTC
CGCCGCCTCGCCGCCCCACGGAGAGGAGGCGCCAGGGTAAGCTCCGCACCCAGC--------------------------
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---------------------------------------------TCTCGTTGCT------------CCCCCATGCTCCT
CATGTTGATTAGTAGATTACTGTCATGACCTCTCGTTCGATTCTTCTCGGCACTCTAAGAGCAAGATTACTGTCATTTTC
GTCCTTTGGTTTCAGTTACAGAATGGAACTTCTGTGCTGTGCTGGGGTTACAACAGCTCTGTGTCTAGATTAGACTGTAT
CGTACCATCATTCTAGATTTCACTAGTCATTTCCAGCTTCTGTAGATGTTCGA------TTTGGTGCGGTGTAGTGACTG
TATGTACATATGTGACTAGGGAGATAGCCGGGGG---AGATGGAATTGCCACGTAACTCGCTGTGCCGGCGAGGCGAATG
TGGTGACCGAGGACGATACGGCGAATGTTGCTGCTG---ATGCCGCAGCGGACCAAGCTGCCAATGCCAGCGGCGATGCC
GCCGATGT------GTCCTTGAACCCTGACGACG---TTGATTCAGTTGCCTGGATAAAGCAGCAGCCTCTCCCTTATCC
TGCAGTAAGTAC---AACAAAAGTAATGATTCACAAACATTGGTGCCGGGAACGGGGTGACGGACAAGGGGTTG----TA
ATGCAGGATGCTCTGGAGCCGTACATAAGCAAGGAGACGGTGGAGCAGCACTGGGGAGTTCACCAGCGCGGGCACGTGGA
CAGGCTCAACGGCATGATCGGCGGCAGCGAGTGGGAGCGGATGTCGATTGGGCAGATGATGCTCGCCTCATTCAATGAGG
GCAGGGAGCCACCCCATGCTCCCTTCTTCCATGCCGCACAGGTAGCATTGCATGCTGTTTGGAA-----------GGCTT
GCGTATGCTTTAGATCCCTAATTCTTGG-CCATGCTATGTAGGTATGGAACCATGATTTCTATTGGCGCTCGATAAAACC
TGGCGGTGGAGGCAAGCCCCCGGAACGTCTTCTGAAGTTTATAAACAGGGACTTCGGATCCTATGACGGCATGATCAAGC
AATTCATGGATGTCGCACTAACTCAGTTCGGTTCTGGATGGGTCTGGCTTTCTTGTAAGTGATGCTAAAGTCCTCTTTTG
TTAGATTTTTTGTACCAGTTTCAGAACTTGCTCCAAGTGGTGTGAATGTGATGAACTGAACTCTGCTCTGTAACTGGTTC
TAGACAAGGGGAGCAAGTTACCCCATGTGAAGTCAAAAAGCCCAATCCCATCTGACAATTATGGTAGGCTGGTCATCTCA
AAGTCTCCAAATGCTATCAACCCTCTTGTCTGGGGCCACTCTGTGAGTATTTACCTGCAACTGTGTTTCCCTACATAATC
ATGCACTGTATACTGTGCACTACTTCATTTTGGAAGCTTTGTATTGCCTCTTATTATTTGTTCCTTTGACAAGAAAGTAT
----------------------------------TTCCATTTATAAA-AAATCTATTGTCTGTCTCCCCCATGCATACTA
TATATTCTACAGTGATCTGATATTTTTGTCTGTCTATTCTTGTTGGCAGCCACTCCTTGCGATTGATGTTTGGGAGGTAT
GCACACATCATTCATTTTCATTTCCATGCATTTTT-CCTTCATAAAAGTTAACATTGCTAACCAATTCTCTGTCTTGGGA
ACAGCATGCCTACTACTTGGATTATGAGGTTAGATGTCAA--TGGTGCTCATGATTTCTAGTGGTTATATTTGCCATATC
CGCCACTTAGTCTGTTCTTGTTACATGGCTGCAGAATCGAAGGGCTGAGTATGTCTCTGCA-------------------
-GTTCTAGAGAAGCTCGTCTCATGGGAAATGGTGGAGTCCAGGCTCCGGAAAGCTGTTCTGCGAGCAATAGAAAGAGACG
GTCACACCAGCCCGAAGCAGCGAAGGAAGCAACTTCTGTCCCAGGCTAAAAGCCGCGTCGGGGATGCAAGCACCAGCGGT
GAGGCAAGAAGGCGACCAAGAAGTAAGGATCAGCAGGCCCCTTCCAGCGTGAGAATGGTTCCAGCAGGCGAGGCGGTACC
GAACTGAGCCATGAGCCTTTGAGGTTGGCGACCAGTAGCTAGCACGGGCAGGCAGCTAGAGCAGCATGTCCAAAATCCTC
CAGAACAGTAGTCTC-----------------------------------------------------------------
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>SNPs
S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------
------------------------------------S--S---------------------S------------------
------------------------------------------------S-------S-----------------------
-------------------------------------SSSS---SSSSSS-SSSSS--SSSSSSS-SSS-SSSS---SSS
--SS-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------S---
S--------------SS---------------------------------------------------------------
---------------S-----------------------------S----------------------------------
-----S------S------------------------------------------------S--------S----S----
---------------------------------------------------------------SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------SSS----------------
S-----------------------------------------------------------------S-------------
----------------S---------------------------------------------------------------
------------------------------S--------S----------------------------------------
------------------SSSS-SSSSSS-SSS-SSS------S--------------------------S---------
-------------------------S----------SSS-----S-S--S---------------------------S--
-----------S----------------------SSS-------------------------------S-----------
------------SSS-------------------------------------S---------S-----------SSSS--
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-SS----------------S------------------------------------------------------------
------------------------------------------S-------------------------------------
-------------S---S--------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-------------------------------------------------------S--S----SS--S---
--------------------------S-------------------------SS----------S---------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
-----------------------------------S------------------S-------------------------
------------------------------------S---SS-----S------------------------S------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------S-----------------------------
---------S-------S--------------------------------------------------------------
-------------S----S---------S-S-------------------------------------------------
------------------------S-S---S-S-S-S--SSS---SSS-SS-----------------------S-----
---S--S-S----------S--S--S---S--S------SSSS---S--SS-------S---------S-SS--S-----
-----------S---------------------------------SSSSS------S--S-S------------------
S--------SSSS---S---------SSSS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-S-
S-S--S--S----S-SS-SS-S---SS--SSSSSSSSSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---SS-S--S----S--SSS-S--S--SSSSSSS-S-S
SSSSS-SS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_284
--------------------------------------------------------------------------------
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------------------------TCCCGAAGACCCAGATCCAT------------------------------------
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>reverse_2012
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CGAGTCCTTGAACCCTGACG-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>forward_1946
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------CCGAGGATGATACGGCGAAA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
>reverse_4014
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GCGGTTTCATGCTCACAAGG-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
