>input_sequence_31803
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---------------------ATGGCGCAGCCGAACCACCGGTACGGCGGCCACCGTGACCTGGAAGCCGTGATAGACAT
GGACCACCCGGAGAAGCCGACCGCGAAAGGCGGCAGCCGGTTCAGCTTCACCGGCGGGCTGGAGTTCACCAGCCTTACGT
ACACGGTGGTCAAGAAGCAGCGCGGAGTCGGCGGGGAGTGGGAGAAGAAGGACGTGGACCTTCTGCACGAGATCACGGGG
TACGCGCCCAAAGGCTGCGTCACCGCCGTGATGGGTCCCAGCGGCGCCGGCAAGTCGACATTCCTGGACGCGCTCGCCGG
GCGCATCTCCAGCCTCGACGGCCGCGTGGCGCTCGACGGCGTCGAGATGAGCCCCAGCGTCATCAAGCGTTCGTCCGCCT
ACGTCATGCAGGACGACCGCCTCTTCCCCATGCTCACCGTCTACGAGACGCTCTTGTTCGCCGCCGACTTCCGCCTCGGC
TCCGCCGTTTCCCCCTCCGACAAGAAGCTCCGCGTCGACAACCTCATCGAGCAGCTCGGACTCACGGTAATA----ATGA
ATCAAAGACGCTACTAGATCATT------------------CGTACGTGCGCACGGTGTGTATA-CGTGTTAACAAAACA
GCTGTGCAGACATCAAGAAACACGTACATCGGGGACGAGGGCACGAGGGGCGTGTCCGGCGGAGAGCGCCGGCGCGTCTC
GATCGGCGTGGACATCATCCACGGGCCGGCGCTGCTGTTCCTCGACGAGCCGACGTCGGGGCTCGACTCGACGAGCGCGC
ACAGCGTGATCGAGAAGGTGCACGACATCGCGTGCGCAGGGAGCACCGTGGTGCTGACCATCCACCAGCCGTCGTCGCGG
ATCCTGCAGCTCCTCGACCACCTCATCATCCTGGCACGCGGGCAGCTAATGTACAGCGGCGGGCCCAAGGAGGTGACCGC
GCACCTCGGCCGCATGGGCCGCAAGGTGCCCAAAGGGGAGAACTCCATCGAGCACCTCCTCGACGTCATCCAGGAGTACG
ACCAGTCCGAGTTCGGCGTCAACGCCCTCGCCGAGTTCTGCCTCACCGGTCTGAAGCCGCGCAAGCTCGCCGCCGAGGGG
ATCTCCACCGTGTCTAGCATCCCTCCGACACCGGTTGGGCCCGGGGGCGAGGACTTCGACCACAGCCTCAGGAGCCAGCA
CTCCAAGTCCCCGTGGAGCGGCGCGCAGTTCACGCCGTCCCGGCGCCCCAAGAAAGATCAAAGCGGCAAGTCACAGAACC
CTCCAAGGTACCCCAAAAACGTTCCTCATCGTGC-----TATGAACATTAGCTTGTCTCCGGGA----------------
---------------ATCGGTCGCATGAACCGCATAGCTTGTCTCCGGGAATCCACAGGTACGGGCCGGAGATCGTGATG
GGGACGCCGACGCCGCTGAGCAGCATCTCGGTGTACACGGTGAACGAGGCCGACTACCTGTCGCCGGCGCAGCGCGCGTC
CGCCACGGGGGCGCCCGGCGTGGGCATCAACGCGCTGGGGCACCGCGGCAAGTTCGCCAACTCGTACGCGGCGGAGGTGT
GGGTGCTGATGCGGCGCAACTTCACCAACATCTGGCGCACGCCGGAGCTGTTCCTGTCGCGGCTGATGGTGCTGACGGTG
ATGGGGTTCCTGATGGCCACCATGTTCACCAAGCCCAAGGACAACACGCAGGGCATCACCAACCGGCTCAGCTTCTTCAT
CTTCACCGTGTGCGTCTTCTTCTTCTCCTCCAACGACGCCGTCCCGGCCTTCATCCAGGAGCGCTTCATCTTCATCAGGG
AGACCTCGCACAACGCGTACCGCGCGTCCGCGTACGTGGTCGCCGGGGTGATCACGTACCTGCCCTTCCTCCTGCTCCAG
TCCGCCGCCTACGCCCTCATCACCTGGTGGGCCATCGGGCTCCACGGCCAGTTCGTCTACTTCCTCGTCATGCTCTACGC
CTCGCTCCTCTCCACCAACTCCTTCGTCGTCTTCATCAGCTCCATCGTGCCAAACTTCATCCTTGGGTAAGTACAAATTT
TCTTTTTGAAGAGG------------------------------AAATGGATTGGTCCGGGCCAAAGCCCAATTAGTACA
TGTAGGAAAACTGGGCCAGTGTAGCTGAACATGGGTTAGCGGGCTGGGCCAGAATTACATACAGTA--------------
----------------------------------------------GTTTATATTGCGACCGTGCTGATGTCTCTGTGTC
TGGACGGACGGTCGGGCCCAGGTACGCGGCGGTGATCGCGTTCACGGCGCTCTTCTTCCTCTTCTGCGGCTACTTCGTGG
ACAGCCAGAGCATCCCGCAGGGGTGGAAGTGGATGAACACCGTGTCCACGATGAAGTACCCGTACGAGGGCCTCCTGATG
AACGAGTTCGGCGGGACGCGCATCTTCTCCTCGAACCCGCCGCTCGACGGCAACGCCATCCTCGAGAACCTCACCATCAG
CGTGCACAAGGACCGCAAGTGGAGGATGGTGCTCTACCTCCTCGGCTGGGCCGTCTTCTACCGCGTGCTCTTCTACCTCG
TCCTCCGCTTCGCCTCCAAGAACAAGAGGAAGTAG---------------------------------------------
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>chr3A_1_TraesCS3A01G253700
CGGACATATTGTCGAACAACATGTGAGCAGG-CCGGCGGCGTCGTTGCCCGACGTTGTCTGTTGTCTTTGGAGTCATGGC
GACTCGTACAACATCTCCTCGGCGGTGACGTCTTCCTTGAAGCCATCTTGGATGCCTAGTCACTGGGAGGCCGGAACAGA
CTCGGGTTGTGCCGACGACTTCTTCCTTCGCTCAGCCACGACGGACGGATCGGTGGCGGTTGCCACACCGGACG------
--------------------------------------------------------------------------------
------------------------GGATGGAAAGGGTAATGGCGTAGATGGAAAGAC-----------------------
-------AAGGGAAAATTTAGGGAAAGTTATATGCATACTATTGAGAATTGGAGAGAGTATCTATAATTTTTCTTCTGTT
AATACTATATTCATATCATTTCCACATAGTTTGGGCACACCTCCAATCATTTTTACTGGGCAGCTTAGCGAGACGAAGTG
GAACGCCGGAAATCCTAAAATAAATCTAGGAATAATGCGAGCACCAGGACTTGAACCGTGGTGGGCAGGGGATACTATTG
TCTCTCTAACCATTCAATCACGAGTTGGTTCACAGGTAATTCCTCTTTTTTAGGACTATTTTTCACGGTAATTCCCAACT
TCCAGTATGGTAGCTAAAAAAAGCTTCATGATACTCTATTATAGACACCTGGCATCCTTTCTCTGGCGGGCTTAACTCCA
AAAGTTCAGCATTCCAGAAGCAACCTCCAAGCAAAAATAGCTGCTAGTACACCTCAATGTGTACGAGGCCATGATACTGT
CGAGGACAAACAACCAATCACCTCTCGGCGGTCGAAACCAAAAGCTGACCCCACCAACGTTCACTCCGATGAATCTCATT
GTCCATCCTCATTTCTCACGCCCGACAATTGGCTCATACCATCGGGACAAAATCTCCAAGCTTGCAGTGGCATGCCAATA
AGAAGGCCAACGCTTTAGTATGCACACGCATTGCATGGTTACAAAAAAACATCATACTCGACTGGCAGCTATAGACAGAA
GCTAGTGTCCGAGAGCACACCATGGCGCAGCCGAACCACCGGTACGGCGGCCACCGTGACCTGGAAGCCGTGATAGACAT
GGACCACCCGGAGAAGCCGACCGCGAAAGGCGGCAGCCGGTTCAGCTTCACCGGCGGGCTGGAGTTCACCAGCCTTACGT
ACACGGTGGTCAAGAAGCAGCGCGGAGTCGGCGGGGAGTGGGAGAAGAAGGACGTGGACCTTCTGCACGAGATCACGGGG
TACGCGCCCAAAGGCTGCGTCACCGCCGTGATGGGTCCCAGCGGCGCCGGCAAGTCGACATTCCTGGACGCGCTCGCCGG
GCGCATCTCCAGCCTCGACGGCCGCGTGGCGCTCGACGGCGTCGAGATGAGCCCCAGCGTCATCAAGCGTTCGTCCGCCT
ACGTCATGCAGGACGACCGCCTCTTCCCCATGCTCACCGTCTACGAGACGCTCTTGTTCGCCGCCGACTTCCGCCTCGGC
TCCGCCGTTTCCCCCTCCGACAAGAAGCTCCGCGTCGACAACCTCATCGAGCAGCTCGGACTCACGGTAATA----ATGA
ATCAAAGACGCTACTAGATCATT------------------CGTACGTGCGCACGGTGTGTATA-CGTGTTAACAAAACA
GCTGTGCAGACATCAAGAAACACGTACATCGGGGACGAGGGCACGAGGGGCGTGTCCGGCGGAGAGCGCCGGCGCGTCTC
GATCGGCGTGGACATCATCCACGGGCCGGCGCTGCTGTTCCTCGACGAGCCGACGTCGGGGCTCGACTCGACGAGCGCGC
ACAGCGTGATCGAGAAGGTGCACGACATCGCGTGCGCAGGGAGCACCGTGGTGCTGACCATCCACCAGCCGTCGTCGCGG
ATCCTGCAGCTCCTCGACCACCTCATCATCCTGGCACGCGGGCAGCTAATGTACAGCGGCGGGCCCAAGGAGGTGACCGC
GCACCTCGGCCGCATGGGCCGCAAGGTGCCCAAAGGGGAGAACTCCATCGAGCACCTCCTCGACGTCATCCAGGAGTACG
ACCAGTCCGAGTTCGGCGTCAACGCCCTCGCCGAGTTCTGCCTCACCGGTCTGAAGCCGCGCAAGCTCGCCGCCGAGGGG
ATCTCCACCGTGTCTAGCATCCCTCCGACACCGGTTGGGCCCGGGGGCGAGGACTTCGACCACAGCCTCAGGAGCCAGCA
CTCCAAGTCCCCGTGGAGCGGCGCGCAGTTCACGCCGTCCCGGCGCCCCAAGAAAGATCAAAGCGGCAAGTCACAGAACC
CTCCAAGGTACCCCAAAAACGTTCCTCATCGTGC-----TATGAACATTAGCTTGTCTCCGGGA----------------
---------------ATCGGTCGCATGAACCGCATAGCTTGTCTCCGGGAATCCACAGGTACGGGCCGGAGATCGTGATG
GGGACGCCGACGCCGCTGAGCAGCATCTCGGTGTACACGGTGAACGAGGCCGACTACCTGTCGCCGGCGCAGCGCGCGTC
CGCCACGGGGGCGCCCGGCGTGGGCATCAACGCGCTGGGGCACCGCGGCAAGTTCGCCAACTCGTACGCGGCGGAGGTGT
GGGTGCTGATGCGGCGCAACTTCACCAACATCTGGCGCACGCCGGAGCTGTTCCTGTCGCGGCTGATGGTGCTGACGGTG
ATGGGGTTCCTGATGGCCACCATGTTCACCAAGCCCAAGGACAACACGCAGGGCATCACCAACCGGCTCAGCTTCTTCAT
CTTCACCGTGTGCGTCTTCTTCTTCTCCTCCAACGACGCCGTCCCGGCCTTCATCCAGGAGCGCTTCATCTTCATCAGGG
AGACCTCGCACAACGCGTACCGCGCGTCCGCGTACGTGGTCGCCGGGGTGATCACGTACCTGCCCTTCCTCCTGCTCCAG
TCCGCCGCCTACGCCCTCATCACCTGGTGGGCCATCGGGCTCCACGGCCAGTTCGTCTACTTCCTCGTCATGCTCTACGC
CTCGCTCCTCTCCACCAACTCCTTCGTCGTCTTCATCAGCTCCATCGTGCCAAACTTCATCCTTGGGTAAGTACAAATTT
TCTTTTTGAAGAGG------------------------------AAATGGATTGGTCCGGGCCAAAGCCCAATTAGTACA
TGTAGGAAAACTGGGCCAGTGTAGCTGAACATGGGTTAGCGGGCTGGGCCAGAATTACATACAGTA--------------
----------------------------------------------GTTTATATTGCGACCGTGCTGATGTCTCTGTGTC
TGGACGGACGGTCGGGCCCAGGTACGCGGCGGTGATCGCGTTCACGGCGCTCTTCTTCCTCTTCTGCGGCTACTTCGTGG
ACAGCCAGAGCATCCCGCAGGGGTGGAAGTGGATGAACACCGTGTCCACGATGAAGTACCCGTACGAGGGCCTCCTGATG
AACGAGTTCGGCGGGACGCGCATCTTCTCCTCGAACCCGCCGCTCGACGGCAACGCCATCCTCGAGAACCTCACCATCAG
CGTGCACAAGGACCGCAAGTGGAGGATGGTGCTCTACCTCCTCGGCTGGGCCGTCTTCTACCGCGTGCTCTTCTACCTCG
TCCTCCGCTTCGCCTCCAAGAACAAGAGGAAGTAGCCT-------CGCCTCG-----CCTGTATCCACATATCATGGTGG
TTTGCTTTGCTGGCTTAATCCC----AAGCTCTCTGGTA------GTCATTCATTTG-----------------------
---------------AATTGACGGGACCACGTACGGATCATGTCAAGATCTCCGTCCAAGATTTGTAGTATTCCTACTGA
ACTGTAATTTTCAGATAAGACATTGTGTTGATACTTGATAGAGCGTGCCGTGATTTATTCTGATCAGTATTTTCTCCGAT
CAGTGGCGTTGTTCGCTCTGATTGCAAGGTCGCACCTCTTGGGCTCGGTCCAACCGTTTGGGGATGCATATCCTACTGCG
GTGACGTGACTGACAGACAAC-TTTGTCATGCTA--CTGACCCGTAGGTTGGTAGCCTGCAGCCACCACGAAAGGGACCA
GGAACTGGCTTTCCTCCCTTCGCCAGCCGGGCCGCCTGGCCAACCGATCTTGATCTCTTGCTCAACGATCGAAATGGACT
AAACCTCGGGGAGCAGACGAGGCGGCGCTGCCCGGCTCCGACCGCTTCCCCGGCGGCGCCGCCTCGTTCGGTCGTGCTAC
AGCAA--------------------GTAAAATGTTTCCAATTACTCTGCCCGCTGTTTCCAGGTGCCTGCCGCGCACAGG
ATCGTTCAGCCTCCTCTT-------TTCTGAAGTCTCAACAATCTATTTATCGCGGACAGCGATTCCTCCAATCCAGAAT
CTTATCTACGCATTATTTTTATTCTTCAACAACCCGTTTTCTGAAATCTGACCAGTCTATTTATTGTGAACAGCGAGGCT
CTGAAAGCGTGGCC-TTTGCTTGCTAAATTTGTTTGCGCAAAAGAGATACTCCATG-----------AGTGGCAAGAAAA
ATTGTGTGCCGTCCATTTGAGCCTGACATGCTAACAAGATAAGTATCGTTTGCGGTTGGAAGCTCGGAAAATCTTCTAGA
AAAGTAGTGGTTCATGTCTCGTTGACAAGGACGCGCACCGTGGAGACAGTAATGATTCTGAACTGGAACTGCAAGAAACG
TCAGGCAGCCAATCGCG
>chr3B_1
CGGGCATATTGTCGAACAACATGTGAGCATGCCCGGCGGTGCCGTTGCCCGACATCGTCTGTTGCCTTTGGAGTCACGAC
GACTCGTACAACATCTCCTCGGCGGCGACATCTTCCGTGAAGCCATCTAGGATA----------------CCGGAACAGA
CTCGGGTTGTGCCGACGACTTCTTCCTTCTCTCGACCACGACGGACGAATCAGTGGCGGTTGCCAGACCTGACGTGCCCA
AATCTATGTCCTCGTCACAGATATGAGGGACGGTTCGTATGCGTCCGCGGACGTATAGGGGCGGATTTGCCAAGTCTAGC
TATAGATGCTCTAATTAAGTGATGGGACGGGAAGGGCAATGGTGTAGATGGAAAGACTGGCTGCGGCGGCCTAGTACGCA
GACCATTAAGGGAAAATTTAGAAAAAGTTATACGCAGACTATTGATGAATGGAGAGAGTATCTATAATTTTTGTTATGTT
AATACTATATTCATATCATTTACACATAGTTTGGGCACACCTTTAATCA-TTTTTACGTGCAGCTTAGCGAGGCGTACCA
ACTGCTCAGTATGTGAGATGTTTCAC------------------------------------------------------
----------------------------------GGTAATTCCTCTTTTTAGGGACTATTTTTCACGGTAATTCCCAACT
TCCAGTATCGTA----------GCTTCATAATACTCTATTGTAGACACCTGGCATCCTTTCTCTGGCGGGCTTAACTCCA
AAAGTTGAGCATTCCAGAAGCAACCTCCAAGCAAAAATAGCTGCCAGTACACTTCAATGTGTATGAGGCCATGATACCGT
CGAGGACAAACAGCCAATCACCTCTCGGCGGTCGAAACCAAAAGCTGACCCTACCAACGTTCACTCCGATGAATCTCCTT
GTCCATCCTCATTTCTCACGCCCGAC-ATTGGCTCATACCATCGGGACAAACTCTCCAAGCTTGCAGTGGCATGCCAATA
AGAAGGCCAACGCTTTAATATGCACACGCATTGCATGGTTACAAAAAA-CATCATACTGGACTGGCAGCAATAGACAGTC
GCTAGTGTCCGTGAG--CACCATGGCGCAGCCGAACCACCGGTACGGCGGCCACCGGGACCTGGAAGCCGTGATAGACAT
GGACCAGCCGGAGAAGCCGACCGCGAAAGGCGGCAGCCGATTCAGCTTCACCGGCGGGCTGGAGTTCACCAGCCTTACGT
ACACTGTGGTCAAGAAGCAGCGGGGTGTCGGCGGGGAGTGGGAGAAGAAGGACGTGGACCTTCTGCACGAGATCACGGGG
TACGCGCCCAAAGGCTGCGTCACCGCCGTGATGGGCCCCAGCGGCGCCGGCAAGTCGACATTCCTGGACGCGCTCGCCGG
GCGCATCTCCAGCCTCGACGGCCGCGTGGCGCTCGACGGCGTCGAGATGAGCCCCAGCGTCATCAAGCGTTCGTCTGCCT
ACGTCATGCAGGACGACCGCCTCTTCCCCATGCTCACCGTCTACGAGACGCTCTTGTTCGCCGCCGACTTCCGCCTCGGC
TCCGCCGTTTCCCCCTCCGACAAGAAGCTCCGCGTCGACAACCTCATCGAGCAGCTCGGTCTCACGGTAATTAACCAAGC
ACGGTACCTGTATTTTACTTTGACAAAAGTAGATCATAGTACGTACGTGCGCACGGAGTGTATA-CGTGTTAACAGAACA
GCTGTGCAGACATCAAGGAACACGTACATCGGGGACGAGGGCACGAGGGGAGTGTCCGGCGGAGAGCGCCGGCGCGTCTC
CATCGGCGTGGACATCATCCACGGGCCGGCGCTGCTGTTCCTCGACGAGCCGACGTCGGGGCTCGACTCGACGAGCGCGC
ACAGCGTGATCGAGAAGGTGCACGACATCGCGTGCGCAGGGAGCACCGTGGTGTTGACCATCCACCAGCCGTCGTCGCGG
ATCCTGCAACTCCTCGACCACCTCATCATCCTGGCACGCGGCCAGCTCATGTACAGCGGCGGGCCCAAGGAGGTCACCGC
GCACCTCGGCCGCATGGGCCGCAAGGTGCCCAAAGGGGAGAACTCCATCGAGCACCTCCTCGACGTCATCCAGGAGTACG
ACCAGTCCGAGTTCGGCGTCAACGCCCTCGCCGAGTTTTGCCTCACCGGTCTGAAGCCGCGCAAGCTCGCCGCCGAGGGG
ATCTCCACCGTGTCTAGCATCCCTCCGACACCGGTTGGGCCCGGGGGCGAGGACTTCGATCACAGCCTCAGGAGCCAGCA
CTCCAAGTCTCCATGGAGCGGCGCGCAGTTCACGCCGTCCCGGCGCCCCAAGAAAGATCAAAGCGGCAAGTCACAGAACC
CTCCAAGGTACCCCAAAAACGTTCCTCATCGTGTCGTGTTATGAAGAT-AGTATGACTCGGTAGCAAGACTGTAGTAGTT
GCACTTGCATGTCCGATCGGTCGCATGAACTGCATAGCTTGTCTCCGGGAATCCACAGGTACGGGCCGGAGATCGTGATG
GGGACGCCGACGCCGCTGAGCAGCATCTCGGGGTACACGGTGAACGAGGCGGACTACCTGTCGCCGGCGCAGCGCGCGTC
CACCACGGGGGCGGCCGGCGTGGGCATCAACGCGCTGGGGCACCGCGGCAAGTTCGCCAACTCGTACGCGGCGGAGGTGT
GGGTGCTGATGCGGCGCAACTTCACCAACATCTGGCGCACGCCGGAGCTGTTCCTGTCGCGGCTGATGGTGCTGACAGTG
ATGGGATTCCTGATGGCCACCATGTTCACCAAGCCCAAGGACAACACGCAGGGCATCACCAACCGGCTGAGCTTCTTCAT
CTTCACCGTGTGCGTCTTCTTCTTCTCCTCCAACGACGCCGTCCCGGCCTTCATCCAGGAGCGCTTCATCTTCATCAGGG
AGACCTCGCACAACGCGTACCGTGCGTCCGCGTACGTGGTCGCCGGGGTGATCACGTACCTGCCGTTCCTCCTGCTCCAG
TCCGCCGCGTACGCCCTCATCACCTGGTGGGCCATCGGGCTCCACGGCCAGTTCGTGTACTTCCTCGTCATGCTCTACGC
CTCGCTCCTCTCCACCAACTCCTTCGTCGTCTTCATCAGCTCCATCGTGCCAAACTTCATCCTTGGGTAAGCACAATTTT
ATTTGG----GAGG------------------------------AAATGGATTGGTCCGGGCCAAAGCCCAATTA---CA
TATCGGAAAGCTGGGCCAGT-----TGAACATGTCTTATCGGGCTGGACCAGAATTACATACAGTTTATATCGCAACCTT
TTTTTTTAGAGAAAAAAGTTTATATTTTTTTAGGGTAAAAAAAAATGTTTAGAAGGCAACCGTGCTGATGTCTGTTGGA-
----------------CCCAGGTACGCTGCGGTGATCGCGTTCACGGCGCTCTTCTTCCTCTTCTGCGGCTACTTCGTGA
ACAGCCACAGCATCCCGCAGGGGTGGAAGTGGATGAACACCGTGTCCACGATGAAGTACCCATACGAGGGTCTCCTGATG
AACGAGTTCGGCGGAGAGCGGGACTTCTCCTCGAACCCGCCGCTCACCGGCAACGCCATCCTCGAGAGCCTCACCATCAG
CGTGGCCAAGGACCGCAAGTGGAGGATGGTGCTCTACCTGCTCGGCTGGGCCGTCTTCTACCGCGTGCTCTTCTACCTCG
TCCTCCGCTTCGCCTCCAAGAACAAGAGGAAGTAGCTCAACCGGAAGGGCCGGGCTCCCTGTATCGACATATCATGCTGG
TTTGCTA-----GCTTAATTAATCCGAAGCTCTCTGGTA------ATCATTCATTTG-----------------------
---------------AATTGACGGGACCACGTACGGATCATGTCAAGATCTCTTTCCAAGATTTGTAGTACTCCTACTGA
ACTGTAATTTTCAGATAAGACATTGTGTTGA-------TAGAGCGTGCCGTGATTTATTCTGATCAGTATTTTCTCCAAT
CTGTGGTGTTGTTCGCTCTGATTGCAAGGTCGCACCTCTTGGGTTTGGTCCAGCCGTTTGGGGATGCATATCCTGGTGCG
ATGACGTGACAGACGGACG-TTCTTCTCATGCTA--GTGACCCGTAGGCTGGTAGCCTGCAGCCACCACGAAAAGGACCA
GGAACTGGCTTTCGTCCCTTTGCTAGCCGGGCCGCCTGGCCAACCGATCTTGATCTCTTTCTCAACGATCCAAATAGACT
AAACCTCGGGGAGC-----AGGCGCCGCTGCCCGGCTCCGACCGCTTCCCCGGCGGCGCCGCCTCGTTCGGTCGTGCTAC
AGCAA--------------------GTAAAACGTTTCCAATTACTCTGCCCGCTGTTTCCAGGTGCCTGACGCGCACAGG
ATCGTTCAGCCTCTT-TT-------TTCTGAAGTCTGAACAATCTATTTATTGCGGACAGCGATT-CTTCAATCCAGAAT
CTTATCTACACATTA-TTTTATTTTTCAACAACCCGTTTTCTGAAATCTGACCAATCTATTTATTGTGAACAGCGAGGCT
CTGAAAGCGTGGCC-T-TGCTTGCTAAATTTGTTTGCGCAAAATAGATGCTCATGAGTGCGCAATAGTACTAC--AAAAA
ATTGTGTGCCGTCCATTTGAGCCTGACATGCTAACAAGATAACTACCGTTTGCGGTTGGAAGCTCGGAAAATCTTCTAGC
AAAGTAGTGGTTCCTGTCTCGTTGACAAGGACACGCACCGTGGAGACAATAATGATTCTGAACTGGAACTGCAAGAAACG
TCAAGCAGCCAATCGCG
>chr3D_411
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------GACGGAGTG
GATCGCCGGAAATCCTGAAATAAATTCAGGAATAATGCGAGCACCAGGACTTGAACTCTGGTGAGCTGGGGATACCACTG
TCCCTCTAACCATCCAATCACAGGTTGGTTCACAGGTAATTCCTCTTTTTTAGAACTA-TTTTCACGGTAATTCCCAACT
TCCAGTATGGTAGCT----------TCCTAATACTCTATTATAGACACATGGCATCCTTTCTCTGGCGGGCTTAACTCCA
AAAGTTCAGCATTCCAGAAGCAACCTCCAAGCAAAAATAGCTGCTACGACACCTCAATGTGTATGAGGCCATGATACTGT
CGAGGACAAACTGCCAATCACCTCTCGGCGGTCGAAACCAAAAGCTGACCCTACCAACGTTCACTCCGATGAATCTCATT
GTCCATCCTCATTTCTCACGCCCGAC-ATTGGCTCATACCATCGGGACAAACTCTCCAAGCTTGCAGTGGCATGCCAATA
AGAAGGCCAATGCTTTAGTATACACACGCATTGCATGGTTACAAAAAA-CATCATACTGGACTGGCAGCAATAGACAGTC
GCTAGTGTCTGTGAG--CACCATGGCGCAGCCGAACCACCGGTACGGCGGCCACCGGGACCTGGAAGCCGTGATAGACAT
GGACCAGCCGGAGATGCCGACGGCGAAAGGCGGCAGCCGGTTCAGCTTCACCGGCGGGCTGGAGTTCACCAGCCTGACGT
ACACGGTGGTCAAGAAGCAGCGGGGCGTCGGCGGGGAGTGGGAGAAGAAGGACGTGGACCTTCTGCACGAGATCACCGGG
TACGCGCCCAAAGGCTGCGTCACCGCCGTGATGGGCCCCAGCGGCGCTGGCAAGTCGACATTCCTGGACGCGCTCGCCGG
GCGCATCTCCAGCCTCGACGGCCGCGTGGCGCTCGACGGCGTCGAGATGAGCCCCAGTGTCATCAAGCGCTCGTCCGCCT
ACGTCATGCAGGACGACCGACTCTTCCCCATGCTCACCGTCTACGAGACGCTCTTGTTCGCCGCCGACTTCCGCCTCGGC
TCCGCCGTTTCCCCCTCCGACAAGAAGCTCCGCGTCGACAACCTCATCGAGCAGCTCGGGCTCACGGTAATATCCCATTA
ATCAAAGACG---CTAGATCATT------------------CGTACGTGCGCACGGTGTGTATAACGTGTTAACAAAACA
TCTGTGCAGACATCAAGGAACACGTACATCGGGGACGAGGGCACGAGGGGCGTGTCCGGCGGAGAGCGCCGGCGCGTCTC
GATCGGCGTGGACATCATCCACGGGCCGGCGCTGCTGTTCCTCGACGAGCCGACGTCGGGGCTCGACTCGACGAGCGCGC
ACAGCGTGATCGAGAAGGTGCACGACATCGCGTGCGCAGGGAGCACCGTGGTGCTGACCATCCACCAGCCGTCGTCGCGG
ATCCTGCAGCTACTCGACCACCTCATCATCCTGGCACGCGGGCAGCTCATGTACAGCGGCGGGCCCAAGGAGGTGACCGC
GCACCTCGGCCGCATGGGCCGCAAGGTGCCCAAAGGGGAGAACTCCATCGAGCACCTCCTCGACGTCATCCAGGAGTACG
ACCAGTCCGAGTTCGGCGTCAACGCCCTCGCCGAGTTCTGCCTCACCGGTCTGAAGCCGCGCAAGCTCGCCGCCGAGGGG
ATCTCCACCGTGTCTAGCATCCCTCCGACACCGGTTGGGCCCGGGGGCGAGGACTTCGACCACAGCCTCAGGAGCCAGCA
CTCCAAGTCTCCATGGAGCGGCGCGCAGTTCACGCCGTCCCGGCGCCCCAGGAAAGATCAAAGCGGCAAGTCACAGAACC
CTCCAAGGTACCCCAAAAACGTTCCTCATCGTGC-----TATGAACAT-AGCTTGTCTCCGGGA----------------
---------------ATCGGTCGCATGAACCGCATAGCTTGTCTCCGGGAATCCACAGGTACGGGCCGGAGATCGTGATG
GGGACGCCGACGCCGCTGAGCAGCATCTCTGTGTACACGGTGAACGAGGCCGACTACCTGTCGCCGGCGCAGCGCGCGTC
CGCCACGGGGGCGCCCGGCGTGGGCATCAACGCGCTGGGGCACCGCGGCAAGTTCGCCAACTCGTACGCGGCGGAGGTGT
GGGTGCTGATGCGGCGCAACTTCACCAACATCTGGCGCACGCCGGAGCTGTTCCTGTCGCGGCTGATGGTGCTGACGGTG
ATGGGGTTCCTGATGGCCACCATGTTCATCAAGCCCAAGGACAACACGCAGGGCATCACCAACCGGCTCAGCTTCTTCAT
CTTCACCGTCTGCGTCTTCTTCTTCTCCTCCAACGACGCCGTCCCGGCCTTCATCCAGGAGCGCTTCATCTTCATCAGGG
AGACCTCGCACAACGCCTACCGCGCGTCCGCGTACGTGGTCGCCGGGGTGATCACGTACCTGCCCTTCCTCCTGCTCCAG
TCCGCCGCCTACGCCCTCATCACCTGGTGGGCCATCGGGCTCCACGGCCAGTTCGTCTACTTCCTCGTCATGCTCTACGC
CTCGCTCCTCTCCACCAACTCCTTCGTCGTCTTCATCAGCTCTATCGTGCCAAACTTCATCCTTGGGTAAGTACAGTACA
TTTTGTTTTTTTTTTAGACAAAGTACATTTTTTTGGTGGGAGGAAAATGGATTGGTCCGGGCCAAAGCCCAATTA---CA
TATCGGAAAACTGGGCCAGC--------------GTTAGCGGGCTGGGCCAGAATTACATACAGT---------------
---------------------------------------------------------------GCTGATGTCTGTCTCTC
TGGT-GGACGGTCGGGCCCAGGTACGCGGCTGTGATCGCGTTCACGGCGCTCTTCTTCCTCTTCTGCGGCTACTTCGTGG
ACAGCCACAGCATCCCGCAGGGGTGGAAGTGGATGAACACCGTGTCCACGATGAAGTACCCGTACGAGGGCCTCCTAATG
AACGAGTTCGGCGGCACCCGCAACTTCTCGTCGAACCCGCCGCTCGACGGCAACGCCATCCTCGAGAACCTCACCATCAG
CGTGGTCAAGGACCGCAAGTGGCGGATGGTGCTCTACCTGCTCGGCTGGGCCGTCTTCTACCGCGTGCTCTTCTACCTCG
TCCTCCGCTTCGCCTCCAAGAACAAGCGGAAGTAGATGAACCGGACGCCTCG-----CCTGTATCGACCTATCATGGTGA
TTTGCTA-----GCTTAATCGG----AAGCTCTTTCTCTTCGGCGATCATTCATTTACGGAGCTGGATACAAGAAAAGTG
ACTTTACGTTGCTTCAATTGACAGGACCACGTACGGATCATGTCAAGATCTCCTTCCAAGATTTGTAGTACTCCTACTGA
ACTGTAATTTTCAGATAAGACATTGTGTTGA-------TAGAGCGTGCCGTGATTTACTCTGATCAGTATTTTGTCCGGT
CAGTGGTGTTGTTCGCTCTGATTGCAAGGTCGCACCTCTTGGGCTTAGTCCAACCGTTTGGGGATGCATTTCCTAGGGCG
GTGACGTGACAGAAGGACAATTTTTCTCATGCTACTGTGACCCGTAGGCTGGTAGACTGCAGCCACCACGAAAAGGACGG
GGAACTGGCTTTCGTCCCTTTGCTAGCGGGGCCGC-TGGCCAACCGATCTTGATCCCTTTCTCAACGATCAAAATGGACT
AAACCTCGGGGAGC-----AGGCAGCACTGCCCGGCTCCGACCGCTTCCCCGGCGGCGCCGCCTCGTTCGGTCGTGCTAC
AGCGACACGGTCGTCTCGCCGGCATGTAAAATGTTTCCAAGCATTCTGCCCGCTGTTTCCAGGTGCCTGCCGCGCACAGG
ATAATAAGCGTAAAGTCTCTGCGTGTTCTGAAGTCTGAACAATCTATTTATTGCGGACAGCGAGTCCTCCAATCCAGAAT
CTTATCTAGGCATTA-TTTTATTTTTCAACAACCCGTTTTCTGAAATCTGACCAATCTATTTATTGTGAACAGCGAGGCT
CTGAAAGCGTGGCCTT-TGCTTGCTAAATTTGTTTGTGCAAAAGAGATGCTCCATGAGTGCAAAAATAGTGGCAAAAAAA
ATTGTGTGCCGTCCATTTGAGCCTGACATGCTAACAAGATAACTATCGTTTGCGGTTGGAAGCTCGGAAAATCTTCTAGA
AAAGTAGTGGTTCATGTCTCGTTGACAAGGATGCGCACCGTGGAGACAATAATGATTCTGAACTGGAACTGCAAGAAACG
TCAAGCAGCCAATCGCG
>SNPs
---S-------------------------S---------S-S-----------S-S--------S-----------S-S-
-------------------------S---S------S-----------S----SSSSSSSSSSSSSSSSS----------
-----------------------------S---SS------------S---S-------------S---S----------
--------------------------------------------------------------------------------
---------------------------S--S-----S-----S-------------------------------------
---------------------SS---------S---S--------SS-S-----------------------S--S----
---------------------S--------------------SS-----S----SSS-S----------------S----
--S-------------S---------S-----------------------------SS-----S--S--------S-S--
--S----------S-------SS---------------------------------------------------------
---------------SSSSSSS-------S--------------------------------------------------
---------------------------------------------------------------S----------------
------------S--------------------------------------S----------------------------
--------------------------S------------------------S----------------------------
------------------------------------------------S---------S----------S--------SS
-----------S---SS---------------------------------------S-----------------------
------S-------------------------------------------------------------------------
----------------------S--S------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
----------SSS-------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
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---------S--S-------------------------------------------------------------------
------------------------------------------------S-------------------------------
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----------------------------------------------------------------------------S---
-S--S--SSS-----------------------------------------------------------------SSS--
-S-S----------------SSSSS--------S-------------------------------S--------------
---------------------------------------------------S-SS--S---------------S-S----
---SS---------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------S-------S---------------------------------------------------------
----SS---------------------------------S----------------------------------------
------------------------------------SS---------------------------S--------------
------SSSSSS--------SS-----------------------S----------------------------------
-----------------------------------------------------S----------------S---------
-------------------------------SSSSSSS------------------------------------------
------S--------------------------------------S-----------------------------S----
----------S---S-----S----S----------S-----------S------------------------S------
-------------S------S--S-----------------------------------S----------S---------
--------------SSSSS-------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S-S--------------------S--------------S----------------------------
---------------S-------S------------------------------S-------------------------
----------------S-------------------------------S--------------------------S----
------------------------------------------S-------------------------------------
------------------------------------------------S-------------------------------
---S-------------
>forward_148
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------------------------------------------------TGGATGCCTAGTCACTGGGA------------
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>reverse_1778
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-----------------AAACACGTACATCGGGGACG-------------------------------------------
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>forward_577
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-----------------------------------------------------------------------------GTG
GAACGCCGGAAATCCTA---------------------------------------------------------------
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>reverse_2449
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------------------------------------------------TAGCTTGTCTCCGGGAATCG------------
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>forward_638
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----------------------------------------------------------TGGTGGGCAGGGGATACTAT--
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>reverse_3205
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----TTTGAAGAGGAAATGGATTGGTCC----------------------------------------------------
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>forward_932
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--------------------------------CGAAACCAAAAGCTGACCCC----------------------------
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>reverse_3412
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---------------------------------------------------TATTGCGACCGTGCTGATGT---------
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>forward_987
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-------CTCATTTCTCACGCCCGACA-----------------------------------------------------
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>reverse_3418
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---------------------------------------------------------GACCGTGCTGATGTCTCTGT---
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>forward_1137
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-----------------------------------------------------------------------------GAA
GCTAGTGTCCGAGAGCA---------------------------------------------------------------
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>reverse_3686
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-----ACAAGGACCGCAAGTGGAG--------------------------------------------------------
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>forward_3436
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--------------------------------------------------------CGACCGTGCTGATGTCTCTG----
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>reverse_4763
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------------------------------------------GTATCGTTTGCGGTTGGAAGC-----------------
--------------------------------------------------------------------------------
-----------------
