>input_sequence_31797
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-----------ATGGAGGGGGGCAGCAACAGCCCGGACAGGCAGTCGTCGGGCGGCAGCCCGGACGAGCGCC---GCAGC
GGAGGGAGGGGGGCGGGGGAGCCGGTGCGCTCGCGGTGGACGCCCAAGCCGGAGCAGATACTCATCCTCGAGTCCATCTT
CAACAGCGGCATGGTCAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGCGCTTCGGCGCCGTCGGCG
ACGCCAACGTCTTCTACTGGTTCCAGAACCGTCGTTCCCGCTCACGCCGCCGCCAGCGCCAGATGCAGGCCGCAGCCGCC
GCGGCCGCAGCAGCAGCAGCAGCAGCCTCCTCCGCCACCGCC---AATAGCTTGCCGGCTGCTAGCGCCACCATCGGTCT
TCCATCCGGCACCGGCTCCGTTCACCCCATGGCAATCGGTGGGTGCGCGAGCCAGTACGAGCAGCAGGCGACCTCGTCGT
CCTCGTCTGGAAGCACGGGAGGCTCGTCGCTGGGGCCTTTCGCGGCGCACGGCGCGGGGGTGCCGGGTGCCGGCGTTGGG
TACCTGCAGGCATCGTGCGGGACATCGTCGCCGCTGGCGTCAGGGCTGATGGCGGACGTCGACACCGGCGGCAGCGACGA
TCTCTTCGCCATCTCGCGTCAGATGGGATTCGTTGGGAGCCCCGCCGGACCCTCCTCCTCGGCGCCGAGCACCGCTGTGC
AGCAGCAGTACTACTCGTGCCAGTTACCGGCAGGTGAGTTGAGTACTGTCGATCATTTTAGTTACGTAGTAGTACGTGGT
TGCTCCCTTCAATTGGTTGGTTCATGTGATCCATCTCATGCATGTAACAATTCCCCTCAACTCTACAAATACTTTCATTG
AAAGACTCTAATTTATGAACTTCTTATGAGAAAGAATTGCTAGTGGATATGCATGAAACATCCAA-AAGAACTTTTGACG
ATGGAAATGCTGATTTCACCCTACAGTTTCGTTTGTCTATATTTATGTGAGATGCAGAATTCAAGGAGATCTAGCTTGGA
TCTTCTGGAGACATACTTTATTTGGTCTTCCTTGAGATATAGTTCAGCTACTTGTTCTTTAGTCCTTGGATATAGTTCAG
TTACAACTTCCTAGTCTACCTGTGCATGCATAAGATCATAGTACCTGATACATCTGTTGTCCTCTCCACCATGACATACG
TCTGTTCTCAATCCTGTGGAGGTTC------------------------------------------------ATCGGGC
AATTTTTAAATTTCTGCATTCATGCATCGTCATCTTTA----TTTCCCTGTGTCTCGTTTGTATATCCACTTAAGCTTCC
ATGTGTCACATGCATCGGATGGAATCAACACATGTTTA--TGCATAATACAGTTGGACGTGATGCCCACTTTGTTGAACA
G----AACGTTTATAGTGAACATGCATGGGTTAAAACTTTGGGATTTCCTGCATGCATGCACATGTACTTGATCGTGATT
TTTCTTATTTTTTCTCTTCACCGTAATACTACC-----ATTACATAGCTTACTTCTAGTTTAAAACAAGGAATGGTAATT
GCGCTGGACAGCCTCTTCATGTTTGCTTGCATGCATGCAGAGATATGCTAAAGTGTCCATGCACGCTAG---CAGATAAT
ACACTACAGCAAAACTGTAAGTTACCGTGTATCTGAATCTAGATGCAAGCCGAGCGTAGATTCACACATAATACTCGGCT
GATATAAGCATATACACCGAGTATTAAAAGAAGAAAACACGGCAACGAAATTGACCTCGGCTTGTATGACCGTAAGCCCA
GCGTGACAAAAAATATGCTCAGCTTATAAGCATATGCCACAAAAAGCGCACGGCT-------------------------
--------------------------------------------------------------------TACA-TATCCTT
TCATCGTTTTCTCATACTCTCATTTTTTTGTTTCGGAAAGGAGGATTTTTTTTTTGCGGGAAATTCGGAAAGGAGGATTA
GCCTGGCCTCTGCATTAGGACGATGCATTCTCATGCTCTCATGACATAACGATATCATCAAATCACATAAACTAGGCCTA
TAAGCAATTTTTTCC--ATATGATAGAGAGGTCCCAACCATGAGTAAACGGTACTACCGAACCACCG-----TATAATAC
CGATCAGAATTTGGTTGGCTAGCTTATGCATGCATCTTTATTTGTTAATAATACTGTCGTCAAATGATCTATTGAATTCT
TATTCTGAGTGGGTTGTATGCCGCCTCTGATTGACTGGCTGATTGCATGTTAATTCCAGCGACGATCACGGTGTTCATCA
ACGGAGTCCCAATGGAGGTCCCGAGGGGTCCAATAGACTTGCGAGCCATGTTTGGCCAGGACGTGGTGCTCCTCCACTCC
ACCGGGACCCTCCTCCCAGTCAACGACTATGGCATTCTGATTCAGAGCTTGCAAATGGGAGAAAGCTATTTTCTGGTAAC
CATCCATATCGCCTCTCAAGTCCATTCTTCTTCATGAAATTAGCATGTCAATTTCACGTATGCACATATATGATCATCTT
ACATTGTCTT--TTTTTCCGCCATGACCCATGTAGGTCTCGAGGCAAACTTAA---------------------------
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>chr4B_1_TraesCS4B01G174400
ATTAGCAGGATTGTAAAAATATAGAAATAAGAAAAGCACATGATTAGAATGTCATGCCAATTAGAATCCTACGGGAGTTA
AGTGTGCTTCATTGCTTTACAGGAAAACCAAAGTGTTTCTTTTCCAAAAAGTTGTGGATGCTAGATTTTTTATGAAATGT
AGTACAAATGTTCTGTATGAAAAATTCCTATAGGATTCAATCATACGAATCAAACAACCACCTTAGTAAAAGTTCCTAAG
GATTATAATCCTCTAGAAATCCTATGAAATTCCTTTAAATTACATCAGTACAACATTTGATCAAAACTTGATGTTATAGG
ACAAGTGTTGGTCACAACATGAATTTGGACAATAAAAAAAATGCAGTGTTGTCTGACTACACAATTATTAATGCTGGTTA
GAACCAGAATTATCACTTGTATACAAAATATAAGTAAGAAAAGAACGTGTCATAGAGAATGTTGGTAATATACAATCATC
TCCCAGTAAGAAGTTGAGTAGTGGTTTCTGAAAATGGTCTTCCAGATAAACCAAGAATTGTAAAGATTAGAATCCCTCAC
AGAATCACTGATCAGGCC-------------CAACACTAATATGTCATA-------------------AAAACAGTAATT
TGGCTGTACGTAGCAGTAAATAAATAATCATGTCGCGGTTGGGGTTGTACAAAGACTCGTTGTACAAACCCCTCGAGTCT
ATAGATATATAGGCACCGCTACTACTG--GAACTTCTCCAGGACATTCTTCCTCTTCTTCACTAACCCGTAAC-------
-CAGCCAGCCAGCCAGCCCCCCTTGCACCTATCTATAAGTACAACCCCTCAACAGAGACATGAGGGTGCAAGGTTGGTTG
TCCCCTTGAATTGCTGCCTTTCCTCGTCACTCTCTCTCAT--------CTCCTCCATCGATCCAAGCACGAAACCGCCCA
GAAACCTACTGCCCTCTTCACACCTAGC-TAGAGCTAGTGTGATTAACCAACGGGTTCTCCCCCCGGCATACCCAACAAT
TCGATTGATCCATGGAGGGGGGCAGCAACAGCCCGGACAGGCAGTCGTCGGGCGGCAGCCCGGACGAGCGCC---GCAGC
GGAGGGAGGGGGGCGGGGGAGCCGGTGCGCTCGCGGTGGACGCCCAAGCCGGAGCAGATACTCATCCTCGAGTCCATCTT
CAACAGCGGCATGGTCAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGCGCTTCGGCGCCGTCGGCG
ACGCCAACGTCTTCTACTGGTTCCAGAACCGTCGTTCCCGCTCACGCCGCCGCCAGCGCCAGATGCAGGCCGCAGCCGCC
GCGGCCGCAGCAGCAGCAGCAGCAGCCTCCTCCGCCACCGCC---AATAGCTTGCCGGCTGCTAGCGCCACCATCGGTCT
TCCATCCGGCACCGGCTCCGTTCACCCCATGGCAATCGGTGGGTGCGCGAGCCAGTACGAGCAGCAGGCGACCTCGTCGT
CCTCGTCTGGAAGCACGGGAGGCTCGTCGCTGGGGCCTTTCGCGGCGCACGGCGCGGGGGTGCCGGGTGCCGGCGTTGGG
TACCTGCAGGCATCGTGCGGGACATCGTCGCCGCTGGCGTCAGGGCTGATGGCGGACGTCGACACCGGCGGCAGCGACGA
TCTCTTCGCCATCTCGCGTCAGATGGGATTCGTTGGGAGCCCCGCCGGACCCTCCTCCTCGGCGCCGAGCACCGCTGTGC
AGCAGCAGTACTACTCGTGCCAGTTACCGGCAGGTGAGTTGAGTACTGTCGATCATTTTAGTTACGTAGTAGTACGTGGT
TGCTCCCTTCAATTGGTTGGTTCATGTGATCCATCTCATGCATGTAACAATTCCCCTCAACTCTACAAATACTTTCATTG
AAAGACTCTAATTTATGAACTTCTTATGAGAAAGAATTGCTAGTGGATATGCATGAAACATCCAA-AAGAACTTTTGACG
ATGGAAATGCTGATTTCACCCTACAGTTTCGTTTGTCTATATTTATGTGAGATGCAGAATTCAAGGAGATCTAGCTTGGA
TCTTCTGGAGACATACTTTATTTGGTCTTCCTTGAGATATAGTTCAGCTACTTGTTCTTTAGTCCTTGGATATAGTTCAG
TTACAACTTCCTAGTCTACCTGTGCATGCATAAGATCATAGTACCTGATACATCTGTTGTCCTCTCCACCATGACATACG
TCTGTTCTCAATCCTGTGGAGGTTC------------------------------------------------ATCGGGC
AATTTTTAAATTTCTGCATTCATGCATCGTCATCTTTA----TTTCCCTGTGTCTCGTTTGTATATCCACTTAAGCTTCC
ATGTGTCACATGCATCGGATGGAATCAACACATGTTTA--TGCATAATACAGTTGGACGTGATGCCCACTTTGTTGAACA
G----AACGTTTATAGTGAACATGCATGGGTTAAAACTTTGGGATTTCCTGCATGCATGCACATGTACTTGATCGTGATT
TTTCTTATTTTTTCTCTTCACCGTAATACTACC-----ATTACATAGCTTACTTCTAGTTTAAAACAAGGAATGGTAATT
GCGCTGGACAGCCTCTTCATGTTTGCTTGCATGCATGCAGAGATATGCTAAAGTGTCCATGCACGCTAG---CAGATAAT
ACACTACAGCAAAACTGTAAGTTACCGTGTATCTGAATCTAGATGCAAGCCGAGCGTAGATTCACACATAATACTCGGCT
GATATAAGCATATACACCGAGTATTAAAAGAAGAAAACACGGCAACGAAATTGACCTCGGCTTGTATGACCGTAAGCCCA
GCGTGACAAAAAATATGCTCAGCTTATAAGCATATGCCACAAAAAGCGCACGGCT-------------------------
--------------------------------------------------------------------TACA-TATCCTT
TCATCGTTTTCTCATACTCTCATTTTTTTGTTTCGGAAAGGAGGATTTTTTTTTTGCGGGAAATTCGGAAAGGAGGATTA
GCCTGGCCTCTGCATTAGGACGATGCATTCTCATGCTCTCATGACATAACGATATCATCAAATCACATAAACTAGGCCTA
TAAGCAATTTTTTCC--ATATGATAGAGAGGTCCCAACCATGAGTAAACGGTACTACCGAACCACCG-----TATAATAC
CGATCAGAATTTGGTTGGCTAGCTTATGCATGCATCTTTATTTGTTAATAATACTGTCGTCAAATGATCTATTGAATTCT
TATTCTGAGTGGGTTGTATGCCGCCTCTGATTGACTGGCTGATTGCATGTTAATTCCAGCGACGATCACGGTGTTCATCA
ACGGAGTCCCAATGGAGGTCCCGAGGGGTCCAATAGACTTGCGAGCCATGTTTGGCCAGGACGTGGTGCTCCTCCACTCC
ACCGGGACCCTCCTCCCAGTCAACGACTATGGCATTCTGATTCAGAGCTTGCAAATGGGAGAAAGCTATTTTCTGGTAAC
CATCCATATCGCCTCTCAAGTCCATTCTTCTTCATGAAATTAGCATGTCAATTTCACGTATGCACATATATGATCATCTT
ACATTGTCTT--TTTTTCCGCCATGACCCATGTAGGTCTCGAGGCAAACTTAAAAGTCCAGTATATAATAGATAGATAGA
GATC---TCTACTCAAGCCTCACTGGATCAGATCGATGCATGGGGCGACAGGGTGCAGTTCTTCAACCATCATAACGGGA
TGATCTGTTGCATGCAAATCATATATCCACCGTGAAGCAAGCTAGCTACATAGTCAAGGTTGGAGGGCCTAATAAACCCG
GACGGGCGTAGTACCTGGCTAGGACAA-TCAAGTAATTAAAAATTTCAAAACAGTGGTAGTATATTTGTATTGCACCATC
AGCCAAGTTCTACGTGAAAAAGCGGTAGACTTTTCTGTTAAGGCTCTTAAGCAAGTGGAGTTCGACCGGCTTACGGTTGC
TCCTAAATCGCCTATATTTGTGGACCCCTTAGTGTCAGATGAGGAGGATGAGGAGTCTGATGCCAACCATGAAGGCAAGC
TCCTTTCCCATCTGATTAAAGACACAACTGAAGTAGACTTGGAAGATACCGCGCGTGACACTATGCTATGTGAGCTCGTC
GCGTCGGTACATAAGAACAAGTCTAATTCAGGAAACAAAAAGGGACGTCCATCTAAGAAGGCAAATGTCTCCAAACACAA
AAAAGATTCATCATGAGAGGAATGTTTTGAAATAGCAGAGGTCTTGGTGACTTGGCTAAACATAAACATATTTCCGATTG
TGTTAGGGATCATTCTTTGGACTTTGTGGCTATTTCTGAGTGTGGCAAGCGTGACTTCCCAACACGTGATCTTAACCATT
TTTCATGTGGTAATGATTATGAATGGCATATTCTATCACCTTCTAGGAGGTCTGGGGGTATTCTATTAGGTATACACTTC
ACATACTTGAAACTTCTCTCTGCATCGAAGGGGGAATATCATATCAAATTCCACCTTCGAAATAAATCTGATAACTTCAT
TTGGAGCTTGGTTGCTGTTTATGGCGCCGCTCAAGAGGAGTTTAAGTCAGCCTTTCTCAAAGAACTCGTCAATACCTGCC
GAGAGAATCCCCACCCT
>chr4D_1
ATTAGCAGGATTGTAAAAATATAGAAATAAGAAAAACACGGGATTGGAATATCATGCCAATTGGAATCCTACGGGAGTTA
AGTTTGTCTGATTGCTTTATAAAAAAAATTTC---------TTCCAAAAAGTCGTGGATGCTAGATTTTCTGTGGAATAT
AGTACAAATGTTCTTTATGAAAAATTTCTATAGGATTCAATCATACGAATCAAACAACCACCTTAGTAAAAGTTCCTAAG
GATTCTAATCCTCTAGAAATTCTACGAAATTCCTTTAAATTACATCAGTACAACATTTGATCAAAACTTCATGTTATTGG
ACAAGTGTTGGTCACAACATGAATTTGGACAATC-AAAAAATGCAGTGTTGTCTGACTGCACAATTATTAATGCTGGTTA
TAACCACAATTATCACTTCTATGCAAAGCATAAGTAAGAAAAGAACGTGTCATAGGGAATGTTGGTAATATACAATCATC
TCCCAATAA-AAGTTGAGTAGTGGTTTCTGAAAATGGTCTTCCAGATAAACCAAGAATGGTAAAGATTAGAATCCCTCAC
AGAATCACTGATCAGGCCGGTGGCACGTTACCAACACTAATATGTCAAA-------------------AAAACACTAATT
TGGCCGTACGTAGCAGTAAATAAATAATCATGGCGCGGTTGAGGTTGTACAAAGACTCGTTGTACAAACCCCTCGAGTCT
ATAGATATATAGGCACCGCTA--------------CTCCAGGACATTCTTCCTCTTCTTCACTAG-------C-------
-CAGGCAGCCAGCCAGCCCCCCTTGCTCCTATCTATAAGTACAACCCCTCAACAAAGACATGAGGGTGCAAGGTTGGTTG
TCCCCTTGAATTGCTGCCTTTCCTCGTCACTCTCTCTCTCTCTCTCACCTCCTCCATCGATCCAAGCACGAAACCGCCCA
GAAACCTACTGCCCTCTTCACACCTAGC-TAGAGCTAGTGTGATTAACCAACGGGTTCTCCCCCCGGCCTACCCAACAAT
TCGATTGATCCATGGAGGGGGGCAGCAACAGCCCGGACGGGCAGTCGTCGGGCGGCAGCCCGGAGGAGCGCCGGAGCAGC
GGAGGGAGGGGGGCGGGGGAGCCGGTGCGCTCGCGGTGGACGCCCAAGCCGGAGCAGATACTCATCCTCGAGTCCATCTT
CAACAGCGGCATGGTCAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGCGCTTCGGCGCCGTCGGCG
ACGCCAACGTCTTCTACTGGTTCCAGAACCGTCGTTCCCGCTCACGCCGCCGCCAGCGCCAGATGCAGGCCGCT------
---------GCCGCAGCAGCAGCAGCCTCCTCGGCTGCCGCCGCAAATAGCTTGCCGGCTGCTAGCGCCACCATCGGTCT
TCCATCTGGCACCTGCTCCGTTCACCCCATGGCAATCGGCGGGGGCGCGAGCCAGTACGAGCAGCAGGCGACCTCGTCGT
CCTCGTCTGGAAGCACGGGAGGCTCGTCGCTGGGGCTGTTCGCGGCGCACGGCGCTGGGGTGTCGGGTGCCGGCGTTGGG
TACCTGCAGGCATCGTGCGGGACATCGTCGCCGCTGGCGTCAGGGCTGATGCCGGACGTCGACAGCGGCGGCAGCGACGA
TCTCTTCGCCATCTCGCGTCAGATGGGATTCGTTGGGAGCCCCGCCGGATCCTCCTCGGCGGCGCCGAACACCGCCGTGC
AGCAGCAGTACTACTCGTGCCAATTGCCGGCAGGTGAGTTGAGCACTGTCGATCATTTTAGTTACG------TACTTGGT
TGCTCCCTTCAATCGGTTGGTTCATGTGATCCATCTCATGCATGTAACAAATCCACTCACCACTACAAATATTTTCATTG
AAAAGAC--AATCTATGAACTTCTGATG----AGAATTGTTACTGGATATGCATGAAACATCCAAAAAGAACTTTTGACG
ATGGAAATGCTGATTTCACCCTACAGTTTCGTTTGTCTATATTTATGTGAGATGCAGAATTCAAGGAGATCTAGCTTGGA
TCTTCTGGAGACATACTTTATTTGGTCTTCCTTACATA----------TACTTGTTCTTTAGTCCTTGGATATAGTTCAG
TTACAACTTCCTAGTCTATCTG----TGCATAAGATCATAGTACGTGATACACCTGTCGTCCTCTCCACCATGGCATACG
TATGTTCTCAATCCTTTAGAGGCTTCATTGTGTTTATGTTATTATTATTATTATTTGGTGCTTTCCATAATGAATAGCGT
GATTTTCAAATTCGAGCATTCACGCATCCTCATATTTA----TTTCGCTGTGTCTCGTTTGTATATCCGCTTAAGCTTCC
ATGTGTCACATGCATAGGATGGAATCAACACATGTTTATATGCACAACACAGTTGGACGTGATGCCCACTTTGTTGAACA
TAATTAACGTTTACAGTGAACATTGGTTACCACC----TTGGGATTTCCTGCATGTATGCACATGTACTTGATCATGATT
TTT------TTTTCTTCTCTTAACGGTATACTACCATTATTACTTAGTGTGCTTCTAGGTTAAAACAAGGAATGGTATAT
ACGCGGGACAGCCTCTTCATGTTTGCTTGCATACATGCAGAGATATGTTACAGTGTCCATGCAAGCTACTAACA-ATAAT
ACTACTTGATATATCCTTTCACGTTCTAAAAAAAAAGATATATCCTTTCACGGTGGAGTTTTTACCCAATATGGGTGGCA
ACATAATCTCTAGATCGGTACACCTTCCCCTTCGACTTTGGTATAGGCGTAGTGTTTGTCTTCTATGGTTTTCCTAATGC
CGTTATGTCATTTTTATTTTATTTTAGTCAGACTGTTTAAGTGTGGATGTGTGCATCTTAAATATGCAGAGGCCGCTTGT
TGCTCAATTGCTTTGTATCTGCTTGATGCTATATTTTGAGTTAACAAAAGTGTCATTTATCAAAAAAATAAA-TATCCTT
TCATGTTTTTCTCTACTCTCGTGGAGTGGTACTAGCCTATAGAACAAATCATGTTCAAGTT-------------------
---------------------------TTCTCATGCTCTCATGACATAGCGATATCATCGAATC--------TAGGTTTT
TTAGTAATTTTC-CCATATATGATAGAGAGGTCCCAACCATGAGTAAACGGTAGTACCGAACCATTGACATTTATAATAC
CGATCAGAATTTGGTTGGCTAGCTTATGCATGCATCTTTATTTGTTAATAATATTGTCGTCAAACGAGCTGTTGAATTCT
TAATCTGAGTGTGTTGTATGCCGCCTCTGATTGACTGGCTGATTGCATGCTAATTCCAGCGACGATCACGGTGTTCATCA
ACGGAGTCCCAATGGAGGTCCCGAGGGGTCCAATAGACTTGCGAGCCATGTTTGGCCAGGACGTGGTGCTCCTCCACTCC
ACCGGGACCCTCCTCCCAGTCAACGACTATGGCATTCTGATTCAGAGCCTGCAAATGGGAGAAAGCTATTTTCTGGTAAC
CATCCATATCGCCTCTCAAGTCCATTCTTCTTCATGAAATTAGCATGTCAGCTTCACGTATGCACATATATGATCATCTT
ACATTGTCTTCTTTTTTTCGCCATGATCCATGTAGGTCTCGAGGCAAGCTTAAAAGTCCCGTATATAATAGATACATAGA
GATC---TCTACTCAAGTCTCACTGGATCAGATCGATGCATGGGGCGACAGGACGCAGTTCTTCAATCATTATAACGGGA
TGATCTCTTGCATGCAGATCATTTATCCATCGAGAAGCAAGCTAGCTACA------------------------------
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>chr4A_430
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-----------------------------ATAAGTAAGAAAAGAATGTGTCATAAAGAATGTTGGTAATATAGAATCATC
TTCCAATAAAAAGTTGAGTAGTGGTTTCTGAAAATGGTCTTCCAGATAAAGCAAAAATGGTAAATATTAGAATCCCTCAC
AGA-TCACTGATCAGGCCGGTGGCACGTTACCAACACTAATATGTTCCTAAAAACACGAATATGTTAGAAAACACTAATT
TGGCCGTACGTAGCAGTAAATAAATAATCATGGCGCGGTTGAGGTTGTACAAA---------------CCCCTCGAGTGT
GTAGATATACAGGCACCGCTACTACTGGAGAACTTCTCCAGGACATTCTTCCCCTTCTTCACTAG-------CCAGGCAG
GCAGGCAGCCAGCCAGCCCCCCTTGCTCATATCTATAAGTACAACCCCTCAACAAAGACATGAGGGTGCAAGGTTGGTTG
TCCCCTTGAATTGCTGCCTTTCCTCGTCA--------CTCTCTCTCACCTCCTCCGTCGATCCAAGCACGAAACCGCCCA
GAAACCTACTGCCCTCTTCACACCTAGCTTAGAGCTAGTGTGATTAACCAACGTTT--TCCTCCCGGCCTACCCAACAAT
TCGATTGATCCATGGAGGGGGGCAGCAACAGCCCGGACGGGCAGTCGTCGGGCGGCAGCCCGGAGGAGCGCCGGAGCAGC
GGAGGGAGGGGGGCGGGGGAGCCGGTGCGCTCGCGGTGGACGCCCAAGCCGGAGCAGATACTCATCCTCGAGTCCATCTT
CAACAGCGGCATGGTCAACCCGCCCAAGGACGAGACCGTCCGCATCCGCAAGCTGCTCGAGCGCTTCGGCGCCGTCGGCG
ACGCCAACGTCTTCTACTGGTTCCAGAACCGTCGTTCACGCTCACGCCGCCGCCAGCGCCAGATGCAAGCCGCAGCCGCC
GCGGCCGCCACCGCAGCAGCAGCCTCCTCC---------GCC---AATAGCTTGCCGGCTGCTAGCGCCACCATCGGTCT
TCCATCCGGCACCGGCTCCGTTCACCCCATGGCAATCGGTGGTGGCGCGAGCCAGTACGAGCAGCAGGCGACCTCGTCGT
CCTCGTCTGGAAGCACGGGAGGCTCGTCGCTGGGGCCTTTCGCGGCGCACGTCGCGGGGGTGTCGGGTGCCGGCGTTGGG
TACCTGCAGGCATCGTGCGGGACATCGTCGCCGCTGGCGTCAGGGCTGATGGCGGACGTCGACAGCGGCGGCAGCGACGA
TCTCTTCGCCATCTCGCGTCAGATGGGATTCGTTGGGAGCCCCGCCGGATCCTCCTCGGCGGCGCCGAACACCGCCGTGC
AGCAGCAGTACTACTCGTGCCAATTGCCGGCAGGTGAGTTGAGCACTGTCGATCATTTTAGTTACG------TACTTGGT
TGCTCCCTTCAATCGGTTGGTTCATGTGATTCATCTCATGCATGTAACAAATCCACTCACCTCTACAAATATTTTCATTG
AAAAGAC--AATCTATGAACTTCTGACG----AGAATTGTTACTGGATATGCATGAAACATCCAAAAAGAACTTTTGACG
ATGGAAATGCTGATTTCACCCTACAGTTTCGTTTGTCTACATTTATGTGAGATGCAGAATTCAAGGAGATCTAGCTTGGA
TCTTCTGGAGACATACTTTATTTGGTTG-CCTTACATA----------TACTTGTTCTTTAGTCCTTGGATATAGTTCAG
TTACAACTTCCTAGTCTATCCG----TGCATAAGATCATAGTACATGATACATCTGTCGTCCTCTCCACCATGGCATACG
TCTGTTCTCAATCCTTTAGAGGCTTCATTGTGTTTATGTTAT---TATTATAATTTGGTGCTTTCCATAATGAATAGGGT
AATTTTCAAATTTGAGCATTCACGCGTCCTCATATTTATTTATTTCGCTGTGTCTTGTTTGTATATCCGCTTAAGCTTCC
ATCTGTCACATGCATCGGATGGAATTAACACATGTTTATGTGCATCATACAGTTGGACGTGATGCCCACTTTGTTGAACA
TAATTAACGTTTACAGTGAACATTAGTTACCACC----TTGGGATTTCCTGCATGCATGCACATGTACTTGATCATGATT
TTTCTTTTTTTTTCTTCTTTTAACGGTATACTACCACTATTACTTAGTGTACTTCTAGGTTAAAACAAGGAATGGTATAT
ACGCTGGACAGCCTCTTCATGTTTGCTTGCATACATGCAGAGATATGTTACAGTGTCCATGCAAGCTACTAACAGATAAT
ACTACTTATTATATCCTTTCACTGTGGAG----------------------------GTTTTTATCCAATATAGGTGGCA
ACATAATCTTCAGATCGTG-------------CGACTTTGGCATAGGCATAGTGTTGGTCTTCTATGGTTTTCCTAATGC
CGTTATGTCATTTTTATTTTATTTTAGTTAGACTGTTTAAGTGTGGATGTATGCATCTTAAATATGCAGAGGCCGTGTGT
TGCTCAATTGCTTTGTATCTGCTTGATGCTATATTTTGAGTTAACAAAAGGGTCATTTATCAAAAAAATTATTTATCCTT
TTATGTTTTTCTCAACTCTCGAGGAGTGGTACTAGCCTATAGAACAAATCATGTTCAAGTT-------------------
---------------------------TTCTCATGCTCTCATGACATAGCGATATCATCGAATC--------TAGGTATA
TTAGTAATTTTC-CC--ATATGATAGAGAGGTCCCAACCATGAGTAAACGGTAGTACCGAACCATTGACATTTATAATAC
CGATCAGAATTTGGTTGGCTAGCTTATGCATGCATCTTTACTTGTTAATAATATTGTCGTCAAATAAGTTGTTGAATTCT
TATTCTGAGTGGGTTGTATGCCGCCTCTGATTGACTGGCTGATTGCATGCTAATTCCAGCGGCGATCACGGTGTTCATCA
ACGGAGTCCCAATGGAGGTCCCGAGGGGTCCAATAGACTTGCGAGCCATGTTTGGCCAGGACGTGGTGCTCCTCCACTCC
ACCGGGACCCTCCTCCCAGTCAACGACTATGGCATTCTGATTCAGAGCCTGCAAATGGGAGAAAGCTATTTTCTGGTAAC
CATCCATATCGCCTCTCAAGTCCATTCTCCTTCATGAAATTAGCATGTCAGCTTCACGTATGCACATATATGATCATCTT
ACATTGTCTT-TTTTTTCCGCCATGACCCATGTAGGTCTCGAGGCAAACTTAAAAGTCCCGTATATAATAGATAGATAGA
GATCATCTCTACTCAAGGCTCGCTGGACCAGATCGATGCATGG--CGACAGGGTGCAGTTCTTCAACCATCATAACGGGA
TGATCTGTTGCATGCAAATCATGTATCCACCGTGAAGCAAGCTAGTTACATAGTCAAAGTTGGAGGGCATAATAAACCCG
GACGAAGGTAGTACCTGGCTAGGACAAATCAAATAATTAGAAGTTTTAAAACAGTGGTAGTATATGTGTATTGCACCATC
AGCCAAGTGCTACGT-----------------------------------------------------------------
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>chr7B_3783
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-------------GTGAAAAAGCGGTTGATTTTTCTGTTAAGGCTCTTAAGCAAATGGAGTTCGGCCGGCTTACGGTTGC
TCCTAAATTGCCTATGTTTGTGGATCCCGTAATATCAGATGAGGAGGATGAGGAAGCTGAAGCTAATAATGAAGGCAAGC
TCCTTTCCCATCTGGTTAAAGACACAACTGAAGTGGACTTGGATGATACTGAGCGTGACACTATGCTAGATGAGCTTGTC
GCCTCGGTACGAAAGAACAAGTCTAATTCAGCAAAGAAAAAGGGACGTCCACATAAGAAAGCAAAGGTCTCTAAACAAAA
AAAATGTATATCATGAGAGGAATGTTTTGGAATAGCAGAGGTCTTGGGGACTTGGCTAAATACAAACATATTTCCGATTG
TGTTAGGGATCATGCTCTAGACTTTGTGGCCATCTCTGAGTGTGGCAAAAGAGACTTCCCAACACGTGATCTTGACCATT
TTTCAAGTGGGTACGATTACAAATGGCACATCCTACCGCCATCTGGGAGGTCTGGGGGCATACTGCTGGGTATACACTCC
ACATATCTGGAACTCATGTCCACGTCTAAGGGGGAATATCATATCAAATTCCACCTTAGAAATAAATCCGACAACTTCCT
TTGGAACTTGGTGGCAGTTTATGGCGCCGCTCAAGAGCAGTTTAAGTTGGCTTTTCTCAAAGAATTGGTCAATACCTGCC
GAGAGAATCCTCATCCT
>chr4D_3784
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--------------TGATAAAGCGGTAGATATCTCTGTTAAGGCCCTTAAGCAAGTAGAATTCGACCGGCTTACGGTTGC
TCCAAAGTCAGCTTTATTTTATGATCCTCTAGTGTCAGATGAGGAGGAAGAGGAGTCTGATGTTAATAATGAAGGCAAAC
TCCTTTCTCATCTGGTTAGAGATACTACCGAAGTAGACTTGGAAGATACTGCACGTGACACTATGCTATGCGAGCTTGTC
GCGTCGGTACGAAAGAATAAGTCTAATTCAGTAAATAAAAAGGGTCGTCCAACTAAGAAGGCAAAAATCTCTAAACATAA
AAAAGGTTCATCATGAGAGGGATGTTTTGGAATAGCAGAGATCTTGGTGACTTGGCTAAGCATAAGCATATTTCCGATTG
TGTTAGAGATCATGCTTTGGACTTTGTGGCCATCTCTGAGTGTGGCAAACGTGATTTTCCAACACGCGATCTTAACCATT
TTTCATGTGGTTATGATTACGAATGGCATATCCTACCACCTTCTGGGAGGTCTGGGGGTATTCTACTTGGAATCCACTCC
ACATACTTGGAATTGTTATCTATTTCAAAGGGGGAATATCATATCAAATTCCACCTTCGAAATAAAGCTGACAATTTCAT
TTGGAGCTTGGTGGCTGTCTA-GGCGCCGCTCAAGAGGAGTTCAAATCGGCATTCCTCAAAGAGTTGGTCAATACCTGCA
GAGAGAATCCCCATCCC
>chr7A_3784
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--------------TGAAAAGGCGGTAGACTTTTCTGTTAAGGCTCTTAAGCAAGTGGAGTTCGACCGACTTACGGTTGC
TCCTAAATCGTTGATATTTATGGACTCCTTAGTGTCAGATGAGGAGGATGAGGAGTCTGGTGCCAACCATGAAGGCAAGC
TCATTTCCCATCTGATTAAAGACACAACTGAAGTAGACTTGGAAGATATTGCACGTGACACTATGCTATGTGAGCTCGTC
GCGTCGGTACGTAAGAATAAGTCTAACTCGGGAAACAAAAAGGGACGTCCATCTAAGAAGGCAAAGGTCTCCAAACACAA
AAAAGGTTCATCATGAGAGGAATGTTTTGGAATAGCAGAGGTCTTGGTGACTTGGCTAAACCTAAACATATTTTTGATTG
TGTTAGGGATCATACTTTGGACTTTGTGGCCATTACTGAGTGTGGTAAGTGTGACTTCCCAACACGTGATCTTGACCATT
TCTCATGTGGTAATGATTATGAATGGCATATTCTTCTGCCTTCTGGGAGGTCTGGGGGTATTCTGATAGGTATACACTCC
ACATACTTGGAACTTCTCTCTACATCGAAGGGGGAATATCATATCAAATTCCACCTTCGAAATAAATCTGATAACTTCAT
TTGGAGCTTGGTTGTTGTTTATGGCGCCGCTCAAGAGGAGTTTAAGTCGGCCTTTCTCAAAGAACTCGTCAATACCTACC
GAGAGAATCCCCACCCT
>chr6D_3784
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--------------TGAAAAGGCGGTAGATTTTTCTGTTAAGGATCTTAAGAAAGTGGAGTTTGACCGACTTACTGTTGC
TCCAAAGTCGCCTATGTTTGTGGACCCCTTAGTGTCAGATGAGGAGGATGAGGAGTCTGATCTCAACCATGGAGGCAAGC
TACTTTCCCATCTGATTAAAGATACAACTAATGTAGACTTGGATGATACCGCGCGTGACACTATGCTATGTGAGC---TC
GCGTCGGTACGAAAGAACAAGTCTAATTCCGTAAACAAAAAGGGACGTCCAACTAAGAAGGCAAAGGTCTCT-----AAA
AAAAGGTTCATAATGAGAGGCATGTTTTGGAATAGCGGAGGTCTTGGTGACTTGGCTAAGCATAAACATATTTCTGATTG
TGTTAGGGATCGTGCCCTTGACTTTGTGGCCATCTCTGAGTGTGGCAAACGTGACTTTCCAACACGCGATCTTGACCTCT
TTTCATGTGGTTATGATTATGAATGGCTTATTCTACCGCCTTCTCGGAGGTCTGGGGGTATTCTGCTTGGTATGCACTCC
ACATACTTGGAACTTCTATCTACATCGAAGGGGGAATATCATATGAAATTCCACCTTCGAAATAAATCCGACAACTTCAT
TTGGAGCTTGGTGGCTGTTTATGGCGCTGCTCAAGAGGAGTTCAAGTCAGCCATTCTCAAAGAATTGGTCAATACCTGCC
GAGAGAATCCCCATCCC
>chr6A_3784
TGAAAAA-------------------------------------------------------------------------
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---------------------GCAGTAGGCTTTTCTGTTAAGGCTCTTAAGCAAGTGGAGTTCGACCGGCTTACGGTTGC
TCCTAAATCGCATTT-TTGGTGGATCCTTTAGTATCAGATGAGGAGGATGAGGAGTCGGATGCCAATCATGAAGGCAGAC
TCCTCTCTCATTTGGTCAAAGATGCTACAGAGGTAGACTTGGAAGATACCACGCGCGAGACTATGCTATGCGAGCTCGTT
GCGTCGGTATGCAAGAACAAGTCTAATTCAGGTAGTAAAAAGGGACGCTCAAATAAGAAGGCAAAAGTCTCCAAACTTAA
AAAAGTTTCATCATGAAAGGAATGTTTTGGAATAGCAGAGGTCTTGGTGACTTGGCTAAGCATAAACACATTTCAGATTG
TGTTAGGGATTATGCTCTCGACTTTGTGGCAATCTTTGAGTGTGGTAAGCGTGACTTCCCAATACGTGATCTTGACCATT
TTTCATGTGGCAAAGATTACGAGTGGCATATTCTGCCGCCTTCTGGGAGGTCTGGAGGTATTCTGTTAGGTATACACTCC
ACTTACTTGGAACTTCTTTCTACTTCGAAGGGGGAGTATCACATCAAATTCCACCTTAGAAATAAATCTGATAATTTCAT
TTGGAGTTTGGTTGCTGTTTATGGCGCCGCTCAAGATGAGTTTAAAGTGGCCTTTCTCAAAGAACTTGTGAATACCTGTC
GAGAAAATCCTCACCC-
>chr4D_3786
AAAAC-A-------------------------------------------------------------------------
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---------------------GCAGTAGACTTTTCCGTTAAGGCTCTTAAGCATATGGAGTTCGACCGGCTTACGGTTGA
TCCTAAATCGCGTAT-TT--TGGATCCCTTAGTATCAGATGAGGACGATGAGGAGTCGGATGCCAATCATGAAGGCAGAC
TCCTCTCTCATTTGGTCAAAGATGCAACTGAGGTAGACTTGAATGACACCACGCGCGGCACTGTGCTTTGTGAGCTCGTT
GCGTCGGTACGCAAGAACAAGTCTAATTCAGGTAGTAAAAAGGGTCGGCCAAAAAAGAAGGCAAAAGTTTACAAACACAA
GAAAGGTTCATCATGAAAGGAATGTTTTGGAATAGCAGAGGTCTTGGTGACTTGGCTAAACATAAACATATTTCCGGTTG
TGTTAGGGATTATGCTCTCGATTTTGTGGCAATCTCTGAGTGTGGCAAGCGTGACTTTCCAACTCGTGATCTCGACCATT
TTTCATGTGGTAAAGATTACAAGTGGCATATGTTACCGCCTTCTGGGAGGTCTGGGGGTATTCTGTTAGGCATACACTCC
ACTTACTTGGAACTTCTTTCGACTTCGAAGGGGGAGTATCATATTAAATTCAACCTTCGAAATAAATCTGATAACTTCAT
TTGGAGTTTGGTTGCTGTTTATGGCGCCGCTCAAGATGAGTTTAAATCGGCCTTCCTCAAGGAACTTGTCAATACCTGCC
GAGAAAACCCACACCC-
>chr6A_3786
AAAAC-A-------------------------------------------------------------------------
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---------------------GCAGTAGACTTTTCCCTTAAGGCTCTTAAGCAAGTGGAGTTCGACCGGCTTACGGTTGC
TCCTAAATCGCATAT-TT--TGGATCCCTTAGTATAAGATGAGGATGATGAGGAGTCGGATGCCAATCATGAAGGCAGAC
TCCTCTCTCATTTGGTCAAAGATGCAACTGAGGTAGACTTGGATGACCCCAGGCGTGACACTATGCTTTGTGAGCTCGTT
GTGTCGGTACGCAAGAACAAGTCTAATTCAGGTAGTAAAAAGGGACGACCAAAAAAGAAGGCAAAAGTTTGCAAACGCAA
GAAAGGTTCATCATGAAAGGAATGTTTTGGAATAGC-GAGGTCTTGGTGACTTGGCTAAACATAAACATATTTCCGATTG
TGCTAGGGATTATGCTCTCGACTTTGTGGCAATCTATGAGTGTGGCAAGTGTGACTTTCCAACACGTGATCTCGACCATT
TTTCATGTGGTAAAGATTACGAGTGGCATATTTTACCGCCTTCTGGGAGGTCTGGGGGTATTCTGTTAGGCATACACTCC
ACTTACTTGGAACTTATTTCGACTTCGAAGGGGGAGTATCATATTAAATTCAACATTCGAAATAAATCTGATAACTTCAT
TTGGAGTTTGGTTGCTGTTTATGGCGCCGCTCAAGATGAGTTTAAATCGGCCTTCCTCAAGGAAATTGTCAATACCTGCC
GAGAAAACCCACACCC-
>chr2D_3786
AAAAC-A-------------------------------------------------------------------------
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---------------------GCAGTAGACTTTTCCGTTAAGGCTCTTAAGCATATGGAGTTCGACCGGCTTACGGTTGA
TCCTAAATCACGTAT-TT--TGGATCCCTTAGTATCAGATGAGGACGATGAGGAGTCGGATGCCAATCATGAAGGCAGAC
TCCTCTCTCATTTGGTCAAAGATGCAACTGAGGTAGACTTGGATGACACCACGCATGACACTATGCTTTGTGAGCTCGTT
GCGTCGGTACGCAAGAACAAGTCTAATTCAGGTAGTAAAAAGGGTCGGCCAAAAAAGAAGGCAAAAGTTTACAAACACAA
GAAAGGTTCATCATCAAAGGAATGTTTTGGAATAGCAGAGGTCTTGGTGACTTGGCTAAACATAAACATATTTCCGATTG
TGTTAGGGATTATGCTCTCGATTTTGTGGCAATCTCTGAGTGTGGCAAGCGTGACTTTCCAACTCGTGTTCTCGACCATT
TTTCATGTGGTAAAGATTACGAGTGGCATGTGTTACCGCCTTCTGGGAGGTCTGGGGGTATTCTGTTAGGCATACACTCC
ACTTACTTGGAACTTCTTTCGACTTCGAAGGGGGAGTATCATATTAAATTCAACCTTCGAAATAAATCTGATAACTTCAT
TTGGAGTTTGGTTGCTGTTTATGGCGCCGCTCAAGATGAGTTTAAATCAGCCTTCCTCAAGGAACTTGTCAATACCTGCC
GAGAAAACCCACACCC-
>chr7A_3794
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------------------------GTAGACTTTTCCGTTAAGGCTCTTAAGCAAGTGGAGTTCGACTGGCTTACGGTTGC
TCCTAAATCGCATAT-TT--TGGATCCCTTAGTATCAGATGAGGACGATGAGGAGTCGGATGCCAATCATGAAGGCAGAC
TCCTCTCTCATTTGGTCATAGATGCAACTGAGGTAGACTTGGATGACACCACGCGCGACACTATGCTTTGTGAGCTCGTT
GCGTCGGTACGCAAGAACAAGTCTAATTCAGGTAGTAAAAAGGGACGGCCAAAAAAGAAGGCAAAAGTTTACAAACACAA
GAAAGGTTCATCATGAAAGGAATGTTTTGGAATAGTAGAGGTCTTGGTGACTTGGCTAAACATAAACATATTTCCGATTG
TGTTAGGGATTATGCTCTCGACTTTGTGGCAATCTCTGAGTGTGGCAAGCGTGACTTTCCAACGCGTGATCTCGACCATT
TTTCATGTGGTAAAGATTACGAGTGGCATATTTTACCGCCTTCTGGGAGGTCTGGGGGTATTCTGTTAGGCATACACTCC
ACTTACTTGGAACTTCTTTCGACTTTGAAGGGGGAGTATCATATTAAATTCAACATTCGAAATAAATCTGATAACTTCAT
TTGGAGTTTGGTTGCTGTTTATGGCGCCGCTCAAGATGAGTTTAAATCGGCCTTCCTCAAGGAAATTGTCAATATCTGCC
GAGAAAACCCACACCC-
>SNPs
-----------------------------------S---SS----S----S-----------S-----------------
---S--SS-S---------S-SS----SSSSSSSSSSSSSS-----------S----------------S-S--S---S-
--------------S-----------S-----------------------------------------------------
----S---------------S---S--------------------------------------------S-------S--
---------------------------------SS-----------------------S---------------------
S-----S-----------S---S----SS---------------------------------------------------
-----S---S------------------------------------------------S---------------------
-----------------------------------------------S--------------------------S-----
----S---------------------------S--------S--------------------------------------
----------------------------------------------------------------SSSSSSSS--------
----S---------------------S---------------------------S-------------------------
--------------------------------------SS----------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------S-------------------------S---------------
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--------S--S--------------------S--SS-------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------S-----------------
----------------------------------------------------------------S---------------
-------------------------------------------------S-------SS---------S------S----
----------------------S--S-----------------S----------------------SSSSSS---S----
-------------S------------------------------------S---S----S-----------S--------
---SSSSSS---S-----------S---SSSS-------S--S-------------------------------------
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---------------------------------SSSSSSSSSSSSSSS--------------------------------
------------------S---SSSS------------------S------------S---------------S------
---------------S-S----S-S--------------------------------------------------S---S
------S------SS-------S-----S----S------------S---------------------S-----------
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S------------S---------SSS-SSSSSSSSSSS------------------------------------S-----
------S--------SS--SSSSSSS--SSSSS----------S---SS---------S------------------SS-
S-------------------------------S--------------S--S------------S----S-----------
--SSSSS-SS-S-S-SS-SSSS-SS--S-S-SSSS-SSSSSSSSSSSSSS--SSS-SSSS--S--S--SS---SSS---S
SSSSS-SSSS--S-SSSS--SSSS-SSSSSSSSS-SSSSS-SSS-S-S-SSSSSSS-SSSS-SSSSS-SSSSSSSSSSSS
SSS-SSSSS-SSS-SSSS-S-SS---SSSSS-SSSSSS-SSSSSS-SSSSSS--S-------------------------
----------------------------------------------------------------------S---------
----SS--------SSSSSSS-SSSS-SSSSS-S-SSS-SSSSSSSSS-SS-S--SSS-SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S----------S----SSSSSSSS----SS--
-S--S------SS----------------------------------------S----------SS--------------
-----------------------------------------------------S-------------S--S---------
-------------------------------------------------S------------------------------
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------------------------------------------------S-------------------------------
--------------------------------------------------SS----------------------------
-----------------------------------------------------------S--------------------
-----------------S--------------------------------------------------------------
----------------------S----------------------------------S----------S-----------
----SSS-------------------------S------S--S---S------------------S--------------
--------S-----------------------------------------------------------------------
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----------S------------------------------------------------------S--------------
-----S-----------------------S--------------------------------------------------
-------------S----------------S-------------------------------------------------
-----------------------------------S--------S---------------------------------S-
---------S-----------S----------------------------------------------------------
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>forward_87
------------------------------------------------------------------TCCTACGGGAGTTA
AGTGTGC-------------------------------------------------------------------------
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>reverse_1783
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----------------------GTTACCGGCAGGTGAGTTGA--------------------------------------
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>forward_1783
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---AGCAGTACTACTCGTGCCAG---------------------------------------------------------
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>reverse_2759
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--------------------------------------CTAGATGCAAGCCGAGCGTA----------------------
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>forward_1854
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--------------------------------------------------------------------------CGTGGT
TGCTCCCTTCAATT------------------------------------------------------------------
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>reverse_3116
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---------------------------------------------------------------------------GATTA
GCCTGGCCTCTGCAT-----------------------------------------------------------------
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>forward_2778
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--------------------------------------CTAGATGCAAGCCGAGCGTA----------------------
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>reverse_3925
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----GGCGTAGTACCTGGCTAGGA--------------------------------------------------------
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