>input_sequence_31791
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--------------------------------------------------------ATGGTACACTGCTCTGTTTATGCT
CATGACC--------TTGTGTCTGCATGTTTAGTTTCCTTGCTTTCCAG-------AACATCTGTGTGTGAACAATGGAG
AAATTAGATTCTGAGCACGAACAAAATCTTCAGAGATGTTGTTTGGTTAAGGATTAGAGTGAACATTTGAAACCCCTGAG
GCTTTCATTTTCAATTTTTTTAAAAA---AGTTGAGTTGTACCGTAGGCCTCTAGGAAAAACCCATGGGTCTCTAGAGAT
TGTTCGGATCAACAGCTGA-------------------------------TACTTTTCTGTTGTCCATGGAAAGCTTGCT
GACTGAATGTCGTGACATCAATTTGATTTCAGACGCAATGACATATAAACACATTCTTTTCCTCATGGATATGTAGTTTC
TAGCGTTCAAATCCAACGATCATGCTCTAACCCAAAATCTTGGTGTCCTTGTCTGACAGAGCATCATGAGCGCCGCCAAT
GGGAAGAGCCCCATAGTGGTTGGGCCCTGGGGAGGGACAGGAGGATACCCCTGGGACGACGGCGTGTACTCGACGGTGTG
CCAGATCATGATCACCCATGGCGCAGCCGTCGACTCGATAAGAATCCAGTATGACCTCAAAGGGCACTCGATCTGGTCGC
AGACGCACGGGAGCACGGAGGACGGGTCTGAAACAGACAAGG-----------------------TAAATGATTTCAGGC
TTCTGTAAAGAATTTTTAGTTTCATAAG----------------------------------------------------
-------TATTTCTGAACAGTATTATTCAGACTTCTTATGTCTGATGATGCAGGTGAAGCTGGATGTTCCCGGGGAAACC
CTACTGTCCGTGAGCGGCCACTACGGATCGGTCTGCGGGAGCCCGATCATCATAAGATCGCTGACGTTCCAGAGCAACCG
CTCCAAGTACGGGCCCTTCGGCACCGAGGACGGCACGCCCTTCTCGCTCCCGGTGAGCAGCGGCAAGATCATCGGCTTCC
ATGGACGGTCCGGGTCGTACCTCAACTCCATCGGCTTCTACCTGAAGCAGGTCCACGTTCCGATCCCGAGTCCCCCGAGC
TACCCAGCCTCGCCGCAGATCCCGACGGCGGCGGCGTACAGCAGACATGGCTACACCGTCGCCGAGGTCGATGATGAGCC
TGAGCACGACATGGCCCTCGCGGTGCGGGACCGGGCCGACGGCTACGCCGTCTACGGCGCCGGTTACCCTAAGCAGCAGT
ACGCGCATCCGTCCCCGGACTACCACGATGGATCGATCATGAACAAG-----GTGCGGTGTCACATGCTTTTGCACCCTT
TGTGTGTGTGTGTGTGTGTGATGATGATGGCTCTGTAGTTTTTGTGTTGTG-AAGTTGTGAGCTTTGGTTGTGCAGATGG
TCTCGTACCCTAGCTCGTACAGGGCGGCGGCGATGAGCGGGCCGGAGACGCACGGGCCCTGGGGCGGCAGCGGCGGCACC
ATCTTCGACGACGGCGTGTACACCGGCGTGTGGCAGATCAACCTGACCCGCGCGGTGGGGGTCACCTCCATGAAGGTGCT
GTACGACCGGCACGGGCAGGCGGTTTGGGGCAACAAGCACGGCTTCAGCAGCGGCGTCCCGCCCGACAAGGTAATCAACG
TGCTCTGCGGCTCATCTGCATGCCGGGCAGACGATCAATCATGGCGTGGATGACTGACGCGCGCTCGTGGTTTGTTTGCT
GCAGATCGCGTTCGACTTCCCGACGGAGGTGCTGACCCACATCACCGGCTACTACGGCCCGACGATCATCATGGGCCCGA
CGGCGGTGCGGTCGCTGACGTTCCACACCAACCGGCGGCGCTACGGGCCCTACGGCGACGAGTACGGCACATACTTCTCC
ACCAGCTTCGCCGACGGGCGCGTCGTGGGGTTCCACGGCCGGGAGGGGTGGTACATCGACGGTATCGGCGTGCACGTGCA
GCGGGGCAAGGTGCCGTCGTCCTCCCTCAGGCGGGCCGCCAGCAGGAGTCCGTCGCCGGCTCCGCGGTCCGACTACGATC
CGGGCGACGTGGACGAGGAGGTGCCCTACGCGGCCATGGTGAAGGAGCCGGCGGCGGCGGGGCCGGGTCCCTGGGGCGGG
CCGGGGGGCCGGGCGTGGGACGACGGCGTGTACGCCGGCGTGAACCAGGTGTACGTGACGCGGGGCGCCCTCATCGGCTC
CATCCAGATCCAGTACGACCGCGGCGACCGGTCGGAGTGGTCGGCCAGGCACGGCACCTCCGGCCACATCACGCACCGGG
TGAAGCTGGACGCGCCGCACGAGGTGCTCACCTGCGTGCGCGGCTACTACAACGCCGACCCGGCCGAGGGGCCCCGCGCG
CTGCGCTCCATCACCTTCGTCAGCAACCGCGGCAGGTACGGCCCGTTCGGGGACGAGGTCGGCACCTACTTCTCGTCGCC
GGCGACGGCCGAGGGGAAGGTGGTCGGGTTCCACGGCCGGAGCGGGCAGCACTTGGATGCCATTGGGGTGCACATGCAGC
ACTGGCAAGGGGACCGCCGGGCTGGGCCCAAATACGTGCTATCCAAATACCTCTTCTGA---------------------
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-------------------
>chr1A_1_TraesCS1A01G325500
TCCATCGCACGGGCGAACATATTCCCAATCCCGACCTCGATACACCGTCCAAAGGGGCAGCATGCGGCGAGCCACCCATC
CATCCCAGCCGAGCGACCTGC-----------GATGCCTGACGGGATGGGCGCCGGCGCCGGAGCCGCACACGGACCAA-
CCTGGCCACGCCCGGCTCCGGTCGGAGCACGCGCGCCAAGTGCTTC----ACGATGATTCATTCCCCCGCGGCAAAGCCC
ACCATCTCAAA--------------------------------------CAAACCCGTGTTCTTCTCCGTTGGTGCCGTG
CCGTGTGCCATCACCACCAGTCCACCACACTGCCAAATTCCTTCCTTATTCGTGTGCACTTTGAGACAGCAAACAGGGTG
ACAATTTCTCCACCATGTCAACCAGAAAACGCATCAAAAATCACTCTCAAAAAACAGGAAGACACGCACCAGAAACACCA
CATGATCAGCATGCGCTCGCCCGCGAAAGGCAGAACAAACAGGGAATCCTGCAAAGGGAATTTCTGTTTCGCCCAAGTCA
TCTACTCATCCACACA------------------------CCCCAAAAAGTCATTCCAGAAGGCCAGGTGAAAGGCAAAT
TTTTGCGTGGAAAATAGCTACAAAAGGTAAATAAATTCTCAG----TTCTCCAATTACCGAATTTCTGCGCGGCACGGCG
GATGGGCGAAAGGAGAATATATGGCAGACTGGGGAAA----------AGATTGGGTTGTTCTCCATTTTGTGGAAAGATT
GCGTTGTTCTCCATTTCGCGTGAATTGGCTCCAGCACGCCGGCGAATCCGGTTCTCCCGGTTGCTTTCAGTTCTCCTCAG
CCGTTAAACGCGGCTGCCTGCTTGCGACAGTGCCTGCTTTTCGCCTCGCCTTCTTGCTCCGGCGATCCTATAAATTGGGC
AGGTCGGTGTTTCTTCGTGTGTCAGTAAGCTCACAAGTCACAAC--GCAGTAGCGGCAAGGTGGTAGTAAGAGGAGGCAC
AGTTTTTGAACCCTCCATCTCCAAAGTG--TTTGAGCCTATTGGCACGAGGAAGAAATGGTACACTGCTCTGTTTATGCT
CATGACC--------TTGTGTCTGCATGTTTAGTTTCCTTGCTTTCCAG-------AACATCTGTGTGTGAACAATGGAG
AAATTAGATTCTGAGCACGAACAAAATCTTCAGAGATGTTGTTTGGTTAAGGATTAGAGTGAACATTTGAAACCCCTGAG
GCTTTCATTTTCAATTTTTTTAAAAA---AGTTGAGTTGTACCGTAGGCCTCTAGGAAAAACCCATGGGTCTCTAGAGAT
TGTTCGGATCAACAGCTGA-------------------------------TACTTTTCTGTTGTCCATGGAAAGCTTGCT
GACTGAATGTCGTGACATCAATTTGATTTCAGACGCAATGACATATAAACACATTCTTTTCCTCATGGATATGTAGTTTC
TAGCGTTCAAATCCAACGATCATGCTCTAACCCAAAATCTTGGTGTCCTTGTCTGACAGAGCATCATGAGCGCCGCCAAT
GGGAAGAGCCCCATAGTGGTTGGGCCCTGGGGAGGGACAGGAGGATACCCCTGGGACGACGGCGTGTACTCGACGGTGTG
CCAGATCATGATCACCCATGGCGCAGCCGTCGACTCGATAAGAATCCAGTATGACCTCAAAGGGCACTCGATCTGGTCGC
AGACGCACGGGAGCACGGAGGACGGGTCTGAAACAGACAAGG-----------------------TAAATGATTTCAGGC
TTCTGTAAAGAATTTTTAGTTTCATAAG----------------------------------------------------
-------TATTTCTGAACAGTATTATTCAGACTTCTTATGTCTGATGATGCAGGTGAAGCTGGATGTTCCCGGGGAAACC
CTACTGTCCGTGAGCGGCCACTACGGATCGGTCTGCGGGAGCCCGATCATCATAAGATCGCTGACGTTCCAGAGCAACCG
CTCCAAGTACGGGCCCTTCGGCACCGAGGACGGCACGCCCTTCTCGCTCCCGGTGAGCAGCGGCAAGATCATCGGCTTCC
ATGGACGGTCCGGGTCGTACCTCAACTCCATCGGCTTCTACCTGAAGCAGGTCCACGTTCCGATCCCGAGTCCCCCGAGC
TACCCAGCCTCGCCGCAGATCCCGACGGCGGCGGCGTACAGCAGACATGGCTACACCGTCGCCGAGGTCGATGATGAGCC
TGAGCACGACATGGCCCTCGCGGTGCGGGACCGGGCCGACGGCTACGCCGTCTACGGCGCCGGTTACCCTAAGCAGCAGT
ACGCGCATCCGTCCCCGGACTACCACGATGGATCGATCATGAACAAG-----GTGCGGTGTCACATGCTTTTGCACCCTT
TGTGTGTGTGTGTGTGTGTGATGATGATGGCTCTGTAGTTTTTGTGTTGTG-AAGTTGTGAGCTTTGGTTGTGCAGATGG
TCTCGTACCCTAGCTCGTACAGGGCGGCGGCGATGAGCGGGCCGGAGACGCACGGGCCCTGGGGCGGCAGCGGCGGCACC
ATCTTCGACGACGGCGTGTACACCGGCGTGTGGCAGATCAACCTGACCCGCGCGGTGGGGGTCACCTCCATGAAGGTGCT
GTACGACCGGCACGGGCAGGCGGTTTGGGGCAACAAGCACGGCTTCAGCAGCGGCGTCCCGCCCGACAAGGTAATCAACG
TGCTCTGCGGCTCATCTGCATGCCGGGCAGACGATCAATCATGGCGTGGATGACTGACGCGCGCTCGTGGTTTGTTTGCT
GCAGATCGCGTTCGACTTCCCGACGGAGGTGCTGACCCACATCACCGGCTACTACGGCCCGACGATCATCATGGGCCCGA
CGGCGGTGCGGTCGCTGACGTTCCACACCAACCGGCGGCGCTACGGGCCCTACGGCGACGAGTACGGCACATACTTCTCC
ACCAGCTTCGCCGACGGGCGCGTCGTGGGGTTCCACGGCCGGGAGGGGTGGTACATCGACGGTATCGGCGTGCACGTGCA
GCGGGGCAAGGTGCCGTCGTCCTCCCTCAGGCGGGCCGCCAGCAGGAGTCCGTCGCCGGCTCCGCGGTCCGACTACGATC
CGGGCGACGTGGACGAGGAGGTGCCCTACGCGGCCATGGTGAAGGAGCCGGCGGCGGCGGGGCCGGGTCCCTGGGGCGGG
CCGGGGGGCCGGGCGTGGGACGACGGCGTGTACGCCGGCGTGAACCAGGTGTACGTGACGCGGGGCGCCCTCATCGGCTC
CATCCAGATCCAGTACGACCGCGGCGACCGGTCGGAGTGGTCGGCCAGGCACGGCACCTCCGGCCACATCACGCACCGGG
TGAAGCTGGACGCGCCGCACGAGGTGCTCACCTGCGTGCGCGGCTACTACAACGCCGACCCGGCCGAGGGGCCCCGCGCG
CTGCGCTCCATCACCTTCGTCAGCAACCGCGGCAGGTACGGCCCGTTCGGGGACGAGGTCGGCACCTACTTCTCGTCGCC
GGCGACGGCCGAGGGGAAGGTGGTCGGGTTCCACGGCCGGAGCGGGCAGCACTTGGATGCCATTGGGGTGCACATGCAGC
ACTGGCAAGGGGACCGCCGGGCTGGGCCCAAATACGTGCTATCCAAATACCTCTTCTGAATGATACGAGACGGCGCGCTT
GTGGCTACTACTCTCTTCGTTTCAAATTACTCGTCGTGGTTTTAGTAATTTGGACCGGAGGAAGTAGTAGCTAGACGCAT
GTTGATTATTCTTGCGACTTGCGTTTTTTAGAAAATTATTACAGGGATGGAGTAGATTTCTTTTTGTAACAGTCATGAAA
TAAACTAGATGGTTTTCCCGCGCGTTGCTTCGGGATTTTAAAAATTAAATTTGGATACATTTTGTACAAATGAAATGATC
TAAATCAAAAGCTATTATTTTCAAAAATAATTGTGTGTGAACAAACAATATGCATGTACGAGCTGGGTGACTAAAGATGA
AACAATCAAATTGTTGTATGCATGTGCTACTAAATACTCCCTCCGTTCCTAAATATAAGTCCTTTTAGAGATTTCAGTAT
AAACTATATATAAATGTATATAGACATAATTTAGAGTATATGTTCACTCATTTTGCTCAGTATGTAGTCCATATTAAAAG
CTCTAAAAGGACATATATTTAGGAACAGAGTGATTAGTTTTAATGGATGATGATATGGCATATTTGATGATCTGAAGGGC
TATATGTTGGAATAATCAGAATCAGTAAGGATCACGTATTTAGTTATTATAAATTCGGGTCACCTATTCGTGGGTTGTCC
AAAAAAAGTTGCTCTTAGTGATTTTCTGTCGCTAAGATTGAAATCCAATGGCAGAGGCATCTCAGTATATAGGAAAAACA
AAAGAAGACTATCAGATATATTCAACAAAGACTGGATGCAACTCAACAACGAGTCTACCGAATGTTACACCCAGCAAAAC
CGACTCGGTTTACCCCATTCGACAAAGTGGCAATAAGTAGAGATCCATTTGCCAGGGAGTCGGCAAGGAATAAACGTCAC
TCGGCAATATAAAGGTGCCTGGTGGCCGGCCGATGGAAACGATGGTGCCACGTGGTCAAGGAGTAAGCCGAGTGACGTGC
CTGGCTTCTAGTTCAGCTA
>chr1B_1
TCCTC-GCACGGACGAACATGTTCCC------AACCTCGATACACCGTCCAAAGGGGCAGCGCGCGGCGAGCCAC----C
CATCCCAGCCGAGCCACCTGCGCCGCCAGTTGGATGCCTGACGGGATGGGCAACGTTCG---------------------
-----------CCGGCTCCGGTTGGAGCACGCGCGCCAAGTGCTTC----ACG-------ATTCCCCCGCGGCAAAGCCG
TGCGACCACTGTAAACTCGGGGTGCCGTCCAGTTCAAAGCCCGCCATCTCAAACTCGTGTTCTTCTC----GGCGCCGTG
-----TGCCATCACCACCG--------CACTGCCAAATTCGTTCCTTATTCGTGTGCAGCTTGAGGCCGTGAACAGGGTG
ACAGTTT-TCTACCCTGTCAAC---------CATCAAAAGTTACTC--TCGAAAAAGGATGACACGCATCAATAACACTA
CATGATCAACATGTGCTCGCTCGCGAAAGGTTCG----ACAGGGAATCCTGCAAAGGTAATTACTGTTCCGCTCCGTCTC
TCACAGCCCACACACCAGCCGAATCCAGCCACCCACACACCCCGAAAAAATCATTCCAGAAGGTGATGTAAAACGGCAAT
TTTTGTGTGGAGAATAACTAGGGAAGGTAAAAAAAAAAT-CTGTAGTTCTCCATTGCCGAATTTGCTGCGCGGCACGGCG
GATGGGCGAAAGGAGAATATATGACAGACAACACCGGGGAAAAGATTAGATTGGGTTGTTCTCCATTTTGTGGAAAGATT
GCGTTGTTCTCCATTTCGCGTGAATTGGCTCCAGCACGCCGGAGAATCCAGTTCTCCTGGTTGCTTTCAGTTCTCCCCAG
CCGTTAAACGCGGCTGCCTGCTTGCGACAGTGGCTGCTTTTCGCCTGCCCTTCTTGCTCTGGTGATCCTATAAATTGGGC
GGGTCGGTGTTTCTTCGTGTGTCAGTAAGCTCAGAGAGTAGTAGTAGCAGCAGCAGCAAGGTGATAGTAAGAGGAGGCGC
AG--TTTGAACCCTCCATCTCTCAAAGTGATTTGAGGCTATTGGCAGGACCGAAATATGGTACACTACTCTGTTTTTGCT
CATGACC--------TTGTGTCTGCATGTTTAGTTTCCTCGTTTTCTGG-------AATATGTGTGTGTAAACAATGGAG
AAATTAGATTCTGAGCATGAACAAAATCTTCAGAAATATCCTTTGGTTAAGGATTACAGTGGACATTATAAACCTTTGAG
GTTTTCATTTCCAAA------AAAAA---AGTTGAGTTGTA--------------------------GGCCTCTAGAAAT
TGTTCGGATCAACCACTGAACT---------------CACATTACATCGATACTTTTCTGTTGTCCATGGAAAGCATGCT
GACTGAATGTCCTGACATCAATTTGATTTCATAGGCAATGAGATGTAAACACTGTATTTTCTTCAAGGATCTATAGTTTC
TAGCATCCAATTCACTGACCATGATCTAA---CAAAATATCGGTGGCCTTGCCTAACAGAGCATCATGAGCGCCGCCAAT
GGGAAGAGCCCCATAGTGGTTGGGCCCTGGGGAGGGACAGGAGGATGCCCCTGGGACGACGGCGTGTACTCGACGGTGTG
CCAGATCATGATCACCCATGGTGCAGCCGTCGACTCGATAAGAATCCAGTATGACCTGAAAGGACAATCGGTCTGGTCAC
AGACGCACGGGAGCACCGAGGACGGGTCTGAAACAGATAAGGTCTGGCCAGCTAAAT-CCTCAGTTAAATGATTTCAGGC
TTCTGTAAAGATTTTTTAGTTTTCAT------------------------------------------------------
---------TTTCTGAACAAAATTATTCAGACTTTTTATGTCTGATGATGCAGGTGAAGCTAGATGTTCCCGGAGAAATC
CTTCTGTCCGTGAGCGGCTACTACGGATCGGTCTGCGGCAGTCCGGTGATCATAAGATCACTGACGTTCCAGAGCAACCG
ATCCAAGTACGGACCCTTCGGCACCGAGGACGGGACGCCGTTCTCGCTCCCGGTGAGCAGCGGCAAGATCATCGGCTTCC
ATGGGCGGTCCGGGTCGTACCTCAACTCCATCGGCTTCTACCTGAAGCAAGTCCACGTCCCGATCCCGAGTCCCCCGAGC
TACCCAGCCTCGCCCCAGCTCCCGACGGCGGCG---TACAGCAGAAATGGCTATACCGTCACCGAGGTTGACGATG----
--AGCATGACATGGCCCTAGCGGTGAGCAACCGGGCCGACAGCTACGCCGTTTACGGCACCGGTTACCCTAAGCAGCAGT
ACGCGCATCCGTCTCCGGACTACCACGATGGATCGATCATGAATAAGGTGTGGTGTGGTGTCACATGCTTTTGCACCCTT
TGTAAGTATGTC---------TGGTGATGGCTCTGCAGTTTTTGTGTTCTGAAAGTTGTGAACTTTGGTTGTGCAGATGG
TTTCGTACCCTAGCTCGTACAG---GGCGGCCGTGAGCGGGCCGGAGACGCACGGCCCGTGGGGCGGCAGCGGCGGCACC
ATCTTCGACGACGGCGTGTACACCGGCGTGTGGCAGATCAACCTGACCCGCGCGGTGGGGGTCACCTCCATGAAGGTGCT
CTACGACCGGCACGGGCAGGCCGTGTGGGGCAACAAGCACGGCTTCAGCAGCGGCGTCCCACCCGACAAAGTAATCAACG
TAATCATGTCGTAGATGACTGTGCTGATGAGTGATGACC-----------TGACTGACGCGCGCTCGTGC----TTTGTT
GCAGATCGCGTTCGACTTCCCGTCGGAGGTGCTGACCCACATCACCGGCTACTACGGCCCGACGATCATCATGGGTCCGA
CGGCGGTGAGGTCGCTGACGTTCCACACTAACCGGCGGCGGTACGGCCCCTACGGGGACGAGTACGGCACCTACTTCTCC
ACCAGCTTCGCCGACGGGCGGGTCGTGGGGTTCCACGGCCGGGAGGGCTGGTACATCGACGGCATCGGCGTGCATGTCCA
GCGGGGCAAGGTGCCGTCG---TCCCTCAGGCGGGCCGCCAGCAGGAGCCCGTCGCCGGCGCCGCGGTCCGACTACGACC
CGAGCGACGTGGACGAGGAGGTTCCCTACGCGGCCATGGTGAAGGAGCCGGCGGCGGCGGGGCCGGGGCCGTGGGGCGGG
CCGGGGGGCCGGGCGTGGGACGACGGCGTGTACGCCGGCGTGAACCAGGTGTACGTGACGCGGGGCGCCCTCATCGGCTC
CATCCAGATCCAGTACGACCGGGGCGACCGGTCGGAGTGGTCGGCACGGCACGGCACCAGCGGCCACATCACCCACCGGG
TGAAGCTGGACGCGCCGCACGAGGTGCTCACCTGCGTGCGCGGCTACTACAACGCCGACCCGGCCGAGGGGCCCCGCGCG
CTGCGCTCCATCACCTTCGTCAGCAACCGCGGCAGGTACGGGCCGTTCGGGGACGAGGTCGGCACGTACTTCTCGTCGCC
GGCGACGGCCGAGGGGAAGGTGGTCGGGTTCCATGGCCGGAGCGGGCAGCACCTCGACGCCATCGGGGTGCACATGCAGC
ACTGGCAAGGGGACCGCCGGGCCGCGCCCAAATACGTCCTGTCAAAGTACCTCTTCTGAGTGATACGAGACGGC------
--------------------------------------------------------------------------------
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-------------------
>chr1D_1
TCCATCGCACGGACGAACATATTCCC------GACCTCGATACACCGTCCAAAGGGGCAGCGTGCGGCGAGCCAC----C
CATCCCAGCCGAGCCACCTGCGCCGCCAGTTCGATGCCTGACGGGATGGGCGACGGCGCCGGAGCCCCACACAGACCCGG
CCTGGCCACGCCCGGCTCCGCCTGGAGCACGCGCGCCAAGTGCTCCCTTGACG-------ATTCTCCCGCGG--------
-------------------------------------------------CAAACTCGTATTCTTCTC----GGTGCCGTG
CCGTGTGCCATCACCACCG--------CACCGCCAAATTCGTTCCTTATTCGTGTGCAGC-TGAGGCCGTGAACATGGTG
ACAGTTT-TCCACCATGTCAACCAGAAAACGCATCAGAAATCACTC--AAAAAAACAGAAGACGCGCATCAGAAACACTA
CACAATCAACATGTGCTCGCCCGCGAAAGGTAGAATAAACAGGGAATCCCGCAAAGGGAATTTCTGTTCCGCGCCGG---
-----TCATCCACACA------------------------CTCGAGAAAGTCATTCCAGAAGGCCAAGTGAAAGGCAATT
TTTCGCGTGGAGAATAACTCGAGAAGGTAAAAAATAAATTCTGTACTTCTCCAATCGCCGAATTTCTGCGCGGCACTGCG
GATGGGCGAAAGGGGAATATATGACAGACAATACTGGGG-AAAGATTAGATTGGGTTGTTCTCCATTTTGTGGAAAGATC
GCGTTGTTCTCCATTTCGCGTGAATTGGCTCCAGCAGGCCGGAGAATCCAGTTCTCCTGGTTGCTTTCAGTTCTCCCCAG
CCGTTAAACGCGGCTGCCTGCTTGCGACAGTGGCTGCTTTTCGCCTCGCCTTCTTGCTCCGGCGATCCTATAAATTGGCC
AGGTCGGTGTTTCTTCGTGTGTCAGTAAGCACACGGCTCGCAAC--GCAGTAGCAGCAAGGTGGTAGTAAGAGGAGGCAC
AG--TTTGAACCCTCCATCTCCGAAGTG--TTTGAGCCCATTGGCAGGACCGAAATATGGTACACTATTCTGCTTTTGCT
CATGAATCATGACCTTTGTGTGTGCATACCTAGCTAATTATTACATCATGTTCCTAAATATATGCGTGTGAACAACAGAG
AAATGGGATTCTAATAATGAATAGAATCTCCAGAAATGTTGTTTGGTTAAGGATTCCACT-GGCATTTCAGACATGTGAG
GTCTTAATTTTCAAA------TTTGTTGGAGTTGAGTTGTA--------------------------GGTCTCTATAATT
TCTTCTGACCCAGAACCTAACTTTTTCCTTGATGGTGCACAATATATCGATACTTTTTCGC---CCATCGAAATCATGCT
AACTGAATATCATGACAACAAATTTGATTTTATGGCAATGAAGCATAAGCACATTATTTTCTTGATGGATTTATAGTTTG
TAGCGTTCAAATCCAACGATCATGCTCTAACCCAAAATCTTGGTTGCCGTGTCTAACAGAG------------CGCCAAC
GGGAAGAGCCCCATAGTGGTTGGGCCCTGGGGAGGGACAGGAGGATACCCCTGGGACGACGGTGTGTACTCGACGGTATG
CCAGATTATGATCACCCATGGAGCTGCCGTCGACTCGATAAGAATCCAGTATGACCTGAAAGGACACTCGGTCTGGTCAC
AGACGCACGGGAGCACGGAGGACGGGTCTGAAACAGATAAGGTCTACCCTGCTAAAACCCTCACCAAAACATCTTCAGGC
TTTCTATATATGATTGCAGAAGTTCTTCTGCACATAATCTGCAACAACGAACTTTTCATAGAACAAGTCTGCTTTCATAA
GTTTTCATATTTCTGAACACAATCATTGAGACTTGGTATGTCTGATGATGCAGGTGAAGCTGGATGTTCCCGGAGAAATC
CTACTGTCCGTGAGCGGCTACTACGGATCGGTCTGCGGTAGCCCGGTCATCATAAGATCACTGACGTTCCAGAGCAACCG
CTCCAAGTACGGGCCTTTCGGCACCGAGGACGGCACGCCCTTCTCGCTCCCGGTGAGCAGCGGCAAGATCATCGGCTTCC
ATGGACGGTCCGGGTCGTACCTCAACTCCATCGGCTTCTACCTGAAGCAAGTCCACGTTCCGATTCCGAGTCCCCCGAGC
TACCCAGCCTCGCCGCAGCTCCCGACGTCGGCG---TACAGCAGAAACGGCTACACCGTCACCGAGGTCGACGATG----
--AGCATGACATGGCCCTCGCAGTGCGGGACCGGGCCGACGGCTACGCCGTCTACGGTGCCGGTTACCCTAAGCAGCAGT
ACGCGCATCCGTCCCCGGACTACCACGATGGATCGATCATGAACAAGGTGTGGTGTGGTGTCACGTGCTTTTGCACTCTT
TGTAAGTACGTC---------TGATGATGGCTCTGTAGTTTTTGTGTTCTGAA-GTTGTGAACTTTGGTTGTGCAGATGG
TTTCGTACCCTAGCTCGTACAGGGCGGCGGCCATGAGCGGGCCTGAGACGCACGGTCCGTGGGGCGGCAGCGGCGGCACC
ATCTTCGACGACGGCGTGTACACCGGCGTGTGGCAGATCAACCTGACCCGCGCGGTGGGGGTCACCTCCATGAAGGTGCT
GTACGACCGGCACGGGCAGGCGGTGTGGGGCAACAAGCACGGCTTCAGCAGCGGCGTCCCGCCCGACAAGGTAATCAACG
CCAACT---GCTCATCTGCATGCTGCACAGACGATCAATCATGGAGTGGATGACTGACGCGCGCTCGTGGGTTGTTTGCT
GCAGATCGCGTTCGACTTCCCGTCGGAGGTGCTGACCCACATCACCGGCTACTACGGCCCGACGATCATCATGGGCCCGA
CGGCGGTGCGGTCGCTGACGTTCCACACCAACCGGCGGCGGTACGGGCCCTACGGGGACGAGTACGGCACCTACTTCTCC
ACCAGCTTCGCCGACGGGCGGGTCGTGGGGTTCCACGGCCGGGAGGGCTGGTACATCGACGGCATCGGCGTGCACGTCCA
GCAGGGCAAGGTGCCGAGG---TCCCTCAGGGCCGCCGCCAGCAGGAGCCCGTCGCCGGCGCCGCGGTCCGACCCCGACC
CGAGCGACGTGGACGAGGAGGTTCCCTACGCGGCCATGGTGAAGGAGCCGGCGGCGGCGGGGCCGGGGCCGTGGGGCGGG
CCGGGGGGCCGGGCGTGGGACGACGGCGTGTACGCCGGCGTGAACCAGGTGTACGTGACGCGGGGCGCCCTCATCGGCTC
CATCCAGATCCAGTACGACCGGGGCGACCGGTCGGAGTGGTCGGCCCGGCACGGCACCAGCGGCCACATCACGCACCGGG
TGAAGCTGGACGCGCCGCACGAGGTGCTCACCTGCGTGCGCGGCTACTACAACGCCGACCCGGCCGAGGGGCCCCGGGCG
CTGCGCTCCATCACCTTCGTCAGCAACCGCGGCAGGTACGGGCCGTTCGGCGACGAGGTCGGGACCTACTTCTCGTCGCC
GGCGACGGCGGAGGGGAAGGTGGTCGGGTTCCACGGCCGGAGCGGGCAGCACCTGGACGCCATCGGGGTGCACATGCAGC
ACTGGCAAGGGGACCGCCGGGCCGCGCCCAAGTACGTCCTGTCAAAGTACCTCTTCTGAACGACACGGGACGGCGCGCTT
GTGGCTTCTA----------------------------------------------------------------------
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-------------------
>SNPs
------------S-------------SSSSSS-----------------------------S-------------SSSS-
--------------S-------------------------------------S-------------S-----S----SS-
----------------------S------------------------------SSSSSSS-------------------S
SS-SS-SSSSS-------------------------------------------S------------SSSS---------
------------------SSSSSSSSS-------------S-----------------SS-----S-S-SS---------
---S---S--------------------------------------SS------S-------------S---------S-
--------S----S----------------S----S--------------------------------S---S-SS-SSS
--SSS--------------------------------------S----------------------S-------------
-----------S----S---S-S--------S---SSS-SSS-------------SS-----------------------
-----------------------S-----SSSSSSSS-------------------------------------------
------------------------------------------S------S-------S------------------S---
--------------------------------S-----------------------------------------------
-----------------------------------SS-----------------S-------------------------
--SS------------------S-----------------------S--SSS-S-S----------S--------S----
---------------------------------------S-S----------------S--S------------------
-----------------S----------------S---------------------S----S------S-----SS----
-S------------SSSSSSS--------------------SSSSSSSSSSSSSSSSSSSSSSSSSS----------S--
--------------S------------------------------------------------------------S----
-----------S-------------------S-S-------S-------------S-----S--------S-S-------
---------------------------------------------S--------S-------------------------
--------------------------------------------------------------------------------
---------------------S-----------------------------------S-----S------S-------S-
-------------------------------------S------------------------------------------
-----------S----------SSSSSS----------------------------------------------------
-------------------SS-------------S--------------------------------------S----S-
------------------S-------------------S------S-------------S--------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
------------------S--------------SSS---------S--------------S----------S----SSSS
SS----S-------------------------------------------------------------------------
-------------------------------------------------------S------------------------
---SS--S---SSSSSSSSSS---------------------------S------------S------------------
-S-----------------------------S-----------------------S--S---------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
-SS---SSS-----------------S-----------------S-------------------------S---------
----------------------S---------------------------------------------------------
----------------------------------------S--------------S--------------S---------
--------------------S--------------------------S--------------S--------------S--
-------------------SSS--------------------------S-----------S-----------------S-
--S-------------------S--------------------------------------------S--S---------
--------------------------------------------------------------------------------
---------------------S------------------------S-----------SS--------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
----------------------------------------------------S----S-----S----------------
----------------------S-S------------S--S--S--S---------------------------------
------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS
>forward_390
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CGTGTGCACTTTGAGACAGC----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>reverse_2456
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CGGTGTCACATGCTTTTGCA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>forward_2327
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TCGATGATGAGCC
TGAGCAC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>reverse_3941
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------CGCGTTGCTTCGGGATTTTA----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
