>input_sequence_31676
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--------------ATGTTCTTCCACATCGTGCTGGAGCGGAACATGCAGCTGCACCCGCGGCACTTCGGCCCTCACCTC
CGCGACAAGCTCGTCGCCAAGCTCATGAAGGACGTCGAGGGCACCTGCAGGTAGGGTTCCGTCGCGCTCGCTCGCTTCCG
CCCG-------CCCGCGGTTCGCTCAACCCTAGGGCTGGCTTTCTCGCAGCGGGCGGCACGGCTTCGTCGTGGCGATCAC
GGGGGTGGAGGACATCGGCAAGGGGCTCATCCGGGAGGGCACGGGCTTCGTCACGTTCCCCGTCAAGTACCAGTGCGTCG
TCTTCCGCCCCTTCAAAGGCGAGATCCTCGAGGCCGTCGTCACCATGGTCAACAAGGTGGATTTT-ACTCGCCTTCTTCA
CAATTGTGTCATGTGCTCAGTGCCTCAGTGCCTCAGTGCCCGGTTTACTGACTTGGATTGTTCATCTTGTTGGTTCTGCA
GATGGGGTTCTTCGCAGAGGCTGGGCCTGTGCAGATCTTTGTGTCAAACCATGTGAGTGACTTGCCATCAATTGGAGCTG
CTTTGCCAAATCGGTAGAATAAATCGATAAAATTTAGAATTTCTGTGTGGTTAATAGTTCAGTGCAAGCTCTTGCATCTT
GATTTGGTTGTGCCGCGGACTCGACTTGTGCCGGTTCATGTAAAAATTAAGTGTGCTTGTGTGTTGTTCTGTTTCTGTAT
GCAGTTGATTCCTGACGATATGGAGTTCCAATCTGGTGATGTGCCAAACTACACGACTTCTGATGGATCGGTATGCTTCT
TTCTGC--ATAAGTGGTTCTTGCTATTTTTTTCATCTTCGGTAAATGCTAGCTAAGTGCCCTGCTTGTTACTATGGACTT
CACCAATACAGGTTAGGCTTTAAAATCATGTACTAATATGACTTCACCAATAAAACTTAGGCTTAAAACACGTTAAATGC
TTACTTAGACTAAACTCTTTTGACCTTCATATTTTT-GTAAATATGTCAAATTTACACTGCTTTTCTTTTCTAAAAGGAA
GGAAAATTTGTTTAGAGTTGCATAAGAGGGTTTTTGGCTTGTTGAGAAATTAAATCAAGGAGATACCACATGTCGCAATT
-------------------------------------------AATTATTATGGCATCTTAATTTACTAAAAATGAAGGA
A-TTTTTGTGTAGTTCGTTAAGAGTTGCACAAAAGTTTGCTCGGTCTGTTGACGGAATAAAGAAAAGAA-CAAACTGCAC
AAG-AAAAATATGGGATAAGAAGA-TTACAAGTAGGCATATTTTATTTTGTGCGAGTGAGGTGTGCTACGTACCACTGCT
GCCTCCATCCACCATCACCAAC------TTATGTTATGGTAAAATAAATGTAAATATATAAAGATAAAGACTATTGGGTA
CTGGTAGGTCATGAAGTATCCACTTGTTGGTTTACTCGTATTGTAGCATCTTGGAAATGAAATTGTGTGTGCTTGTATTA
TTATTCTTCTGGC-TATAATCGCAGGATCCATGTGCTATATGAAATTATGAATGCTTGTTGCAAACATGAATATGTCTAT
ATAAATACTCTCTCAAAGAAGAATATGAATGGGTATCATTATGAAATATAAAAGGGATTGTTCTGTTGAAAATGATTTGC
TTTATTATTTTCTTTGTGTTAAGTGGGAGTTGCTTGTTTGTCTGCTTCAGGTGAAAATTCAAAAAGAAAGTGAGGTTCGT
CTGAAGATTATAGGCACTCGTGTTGACGCAACAGAAATTGTAAGTTGGTTATCCTTTGTTTTATGGAAGTTTCTGAATTA
AAAGTGCTCAAGTC---TAGAATTTTGTGGCATGACCTCTGAGTAACTACCATATGTTACTGATATTCGACTTGATGATC
TAATTCCATATGAAGTACTCCCTCCGTCCCAAAATACTTGTCGGAGAAATGGATTAAATTGAATGTATCTATAACTAAAA
TACGCCTAGATCGGAGAAATGGATAAAATTGAATGTATCTATAACTAAAATACGTCTAGATTCATCCATTTCCCCGACAA
GTATTTCCGGACGGAGGGAGTACCATTAAGATCATTGCATACAATTCTTTGTAGTCTCTAATTACCTACCATGAACAGGC
ATGTGTAGTTTTGTTCGCAAATAGCAATCTTTATATAACTTGCTTAATCAGTCCAAGAAAACCAGCATATGACTATGAAT
TTAAGATGCAAATAAGATCTCTTTTTTGTGGTGTTAAATTTGATGTTCTTTCCTCTGGCATATGTTGTAACCACCCGAGG
CACATAAACTGATAGTGCGCTAATCAATGAGAAGATGTTTTGCAAAAATGTTGAATATTTTCCTGG---TCTGTCTTCCT
GGACCATAATCAGATACCGAAAATAAGAAAGGCAATTTCATCATGAAACTACAATCGCATATATGTATCCATCCTCTCAC
CTTTTAATCTTGGTTGCACCATTATCTTATAATTTGATTCTTTTTTGTATCAGTTTTGCATCGGCACGATAAAAGACGAC
TTTCTGGGTGTTATCAGTGATCCTGGTGGAGCGCTGTAA-----------------------------------------
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>chr1B_1_TraesCS1B01G261500
AACGG------------------------TTGGCGTTCACTCAAAAATCTGAGCATCAATTTGCAATCATATAGCAAATT
GCAGAGCACCTTATGTTACACTATTAGTGAATGTATAGCAGTTTGTGAATGTATAGCAAAACGTGGTTTCCTTATTTTAC
ACTACTCCCTCCGTTCCCAAATATTTGTCTTTCTAGACATTTGAAATGGTTACAACATACGGATGTATGTAGACATATTT
TAGAGTGTAGATTCACTCTGCTTCGTATGTAGTCACTTGTTGAAATCTCTAGAAAGACAAATATTTAGGAACGGAGGGAG
TATTAGTTTGTGAATGACACCGTGGTGAAACAATTATCATCCACTAAAGACTCTGGGCGTCAGTTCGCAATCATATAGCA
AAGTACAGACACCTAGTGACCCCCTTATACAACAACGGAGCAAGGGTTCCATTCCTACTGACCTTGTGAATGTCGATACA
TGGCCTGAAGCTAACGGCGCAGGCGACGGCACGCCCTCCTGCAAAAACGCACGGCCAATCTCATATTCCCGACCAGACAC
CGTAACATTGCATCTGAAGAAAGCAACGGAGATATTCAAAGGGGGAAA-AACATACTTGACGCGCCGGATTGCGCCGGGC
GTGCCGAGACCCGCGAGCTCGCCCAAACGTGCTGCGGCGCCGCGCACGGCGGGTGTGGAAGCCTAGCCGCGCATCTCGAC
GCCATCGGGAAGTTCGACGATGGGGCGACGGCGGGGTAGGGTTTTTCCGTCAGGTTCCAGCGGCGAGAGCAGAGGAAAAG
GGTCAGAGAGACCAAACCAAGGAGCACTAGTAGGGGTGAGTGTCTTACGCTGACGCTGTCCCATTGGACGGCCGAGATGC
GCTGGAGGTCAGATCGACGGCCCAGAGCG------CTCAGGGCTATTACTCCCCCGCAGCTCACGGGGCGAGGCATCCAT
CGATTA---------GCCGTTCCCGACTCGGCGAAAGGACTGTCTCGCCGCCGCCGCCGGC---------CGACGAGGAG
GAGGCCA-----AGATGTTCTTCCACATCGTGCTGGAGCGGAACATGCAGCTGCACCCGCGGCACTTCGGCCCTCACCTC
CGCGACAAGCTCGTCGCCAAGCTCATGAAGGACGTCGAGGGCACCTGCAGGTAGGGTTCCGTCGCGCTCGCTCGCTTCCG
CCCG-------CCCGCGGTTCGCTCAACCCTAGGGCTGGCTTTCTCGCAGCGGGCGGCACGGCTTCGTCGTGGCGATCAC
GGGGGTGGAGGACATCGGCAAGGGGCTCATCCGGGAGGGCACGGGCTTCGTCACGTTCCCCGTCAAGTACCAGTGCGTCG
TCTTCCGCCCCTTCAAAGGCGAGATCCTCGAGGCCGTCGTCACCATGGTCAACAAGGTGGATTTT-ACTCGCCTTCTTCA
CAATTGTGTCATGTGCTCAGTGCCTCAGTGCCTCAGTGCCCGGTTTACTGACTTGGATTGTTCATCTTGTTGGTTCTGCA
GATGGGGTTCTTCGCAGAGGCTGGGCCTGTGCAGATCTTTGTGTCAAACCATGTGAGTGACTTGCCATCAATTGGAGCTG
CTTTGCCAAATCGGTAGAATAAATCGATAAAATTTAGAATTTCTGTGTGGTTAATAGTTCAGTGCAAGCTCTTGCATCTT
GATTTGGTTGTGCCGCGGACTCGACTTGTGCCGGTTCATGTAAAAATTAAGTGTGCTTGTGTGTTGTTCTGTTTCTGTAT
GCAGTTGATTCCTGACGATATGGAGTTCCAATCTGGTGATGTGCCAAACTACACGACTTCTGATGGATCGGTATGCTTCT
TTCTGC--ATAAGTGGTTCTTGCTATTTTTTTCATCTTCGGTAAATGCTAGCTAAGTGCCCTGCTTGTTACTATGGACTT
CACCAATACAGGTTAGGCTTTAAAATCATGTACTAATATGACTTCACCAATAAAACTTAGGCTTAAAACACGTTAAATGC
TTACTTAGACTAAACTCTTTTGACCTTCATATTTTT-GTAAATATGTCAAATTTACACTGCTTTTCTTTTCTAAAAGGAA
GGAAAATTTGTTTAGAGTTGCATAAGAGGGTTTTTGGCTTGTTGAGAAATTAAATCAAGGAGATACCACATGTCGCAATT
-------------------------------------------AATTATTATGGCATCTTAATTTACTAAAAATGAAGGA
A-TTTTTGTGTAGTTCGTTAAGAGTTGCACAAAAGTTTGCTCGGTCTGTTGACGGAATAAAGAAAAGAA-CAAACTGCAC
AAG-AAAAATATGGGATAAGAAGA-TTACAAGTAGGCATATTTTATTTTGTGCGAGTGAGGTGTGCTACGTACCACTGCT
GCCTCCATCCACCATCACCAAC------TTATGTTATGGTAAAATAAATGTAAATATATAAAGATAAAGACTATTGGGTA
CTGGTAGGTCATGAAGTATCCACTTGTTGGTTTACTCGTATTGTAGCATCTTGGAAATGAAATTGTGTGTGCTTGTATTA
TTATTCTTCTGGC-TATAATCGCAGGATCCATGTGCTATATGAAATTATGAATGCTTGTTGCAAACATGAATATGTCTAT
ATAAATACTCTCTCAAAGAAGAATATGAATGGGTATCATTATGAAATATAAAAGGGATTGTTCTGTTGAAAATGATTTGC
TTTATTATTTTCTTTGTGTTAAGTGGGAGTTGCTTGTTTGTCTGCTTCAGGTGAAAATTCAAAAAGAAAGTGAGGTTCGT
CTGAAGATTATAGGCACTCGTGTTGACGCAACAGAAATTGTAAGTTGGTTATCCTTTGTTTTATGGAAGTTTCTGAATTA
AAAGTGCTCAAGTC---TAGAATTTTGTGGCATGACCTCTGAGTAACTACCATATGTTACTGATATTCGACTTGATGATC
TAATTCCATATGAAGTACTCCCTCCGTCCCAAAATACTTGTCGGAGAAATGGATTAAATTGAATGTATCTATAACTAAAA
TACGCCTAGATCGGAGAAATGGATAAAATTGAATGTATCTATAACTAAAATACGTCTAGATTCATCCATTTCCCCGACAA
GTATTTCCGGACGGAGGGAGTACCATTAAGATCATTGCATACAATTCTTTGTAGTCTCTAATTACCTACCATGAACAGGC
ATGTGTAGTTTTGTTCGCAAATAGCAATCTTTATATAACTTGCTTAATCAGTCCAAGAAAACCAGCATATGACTATGAAT
TTAAGATGCAAATAAGATCTCTTTTTTGTGGTGTTAAATTTGATGTTCTTTCCTCTGGCATATGTTGTAACCACCCGAGG
CACATAAACTGATAGTGCGCTAATCAATGAGAAGATGTTTTGCAAAAATGTTGAATATTTTCCTGG---TCTGTCTTCCT
GGACCATAATCAGATACCGAAAATAAGAAAGGCAATTTCATCATGAAACTACAATCGCATATATGTATCCATCCTCTCAC
CTTTTAATCTTGGTTGCACCATTATCTTATAATTTGATTCTTTTTTGTATCAGTTTTGCATCGGCACGATAAAAGACGAC
TTTCTGGGTGTTATCAGTGATCCTGGTGGAGCGCTGTAAATGATCCAAAGAAGACTCGGCATGCTCTCCAACTTCCGCAT
CATC--ATATATCTGGGAAGAGTCCCCAAGGAAGGTTGCGACTGATCTGTAATTTGTGTCCTGATGTAAAATGTGATGTC
ATGCCTATCTAATGGAAGTCAGGGTACTGCTAGTGTTAAAAAAAAGTAACTGGCACCTGTATTATCGTAACTATGATCTT
TTCTAATTGTGGTGGTTGATATGTTTGGATTCAAGCAGTTGTCTGAACTTCCAGACCAGATTGTGC-GACCATGCATCGC
ATCTA-ACCACTTCTTCTCACATTTGACGATGTTAATTGGTGGCAGTTGTTTTAAAAGTCATATAACTAAAATAAATGGA
AATACAAGTCAATGCTCTCAAGTGCGATGAAAGTATCTTATCATATAAATTTGATACACTGATACTTAAGGTTGTTCCGT
CTTTGACAACACTGCACTAATAAACAGGCTAATAAACACCATTCGCTTTCACTAGCGTCAGCTGTACCCTTCCATGATCA
CATGCAGGTTGTGCCCCTAAGATGGTTAGTGGTCATTTGACCTAGCACCTGCA-AGAAAACAACTGAAATTAGCTGATGC
AATATGTAACCTACTTCAAATGTA---------------------------------------------------ACGC-
------------TGCATACAGAACACATATAGCTCACCTGCTTACAACCCAACATGATTGTAAACGGTTTTTGGATGTTA
TCCTTTTGTCCACGTGAGTCACGCTGTACAAAGAAATTACAAACTGGTTCTTGTCCACTGTCCATGCTACTGCTTTGTTT
CCACTTGCCGAATGTGCTGCTCCCATGATGTCCGAAAATTGGTTGTGTAAATCACAATTTTGAGCAACATGTGGGGTATG
ATGGTCACATGACAATCTAGAACAGCTCCTGAAAACATCAAGAAGATGTTAGTAAGTTCGCATGAA-CACCACAATTATG
AAATACGTACGAGAATAGCTCTCGAATACCTGATACCATCAAACCAATCTTTCTGAAAAGGAAGCCAGG
>chr1D_1
AACGG------------------------TTAGCGTTCACTCAGAAATGTGAGCATCAATTTGCAATCATATAGCAAAGT
GCAGAGCACCTTATTTTACACTAT------------------TTGTGAATGTATAGCAAAACATGGTTTCCTTATTTTAC
ACTATTAGTGTTAGTCCAC-------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------GGTGAAACAATTACCATCCACTAAAGACTCTGGGCATCAGTTTGCAATCATATAGCA
AAGTACAGACACCTAGTGACCCCCTGATACAACAACGGAGCAAGGGTTCCATTCCTACTGACCTTGTGAATGTCGATACA
TGGCCTGAAGCTGACGGCGCACACGACGGCACGCCCTCCTGCCAAAACGCACGGCCAATCTCATATTCCCGACCAGACAC
CGCAACATTGCATCTGAAGCAAGCAACAGAGATATTCAAAGGGGGGAAGAACATACTTGACGCGCCGGATTGCGCCGGGC
GTGCCGAGACCCGCGAGCTCGCCCAACCGTGGTGCGGCGCCGCGCACGGCGGGTGTGGAAGCCTCGCCGCGCATCTCGAC
GCCATCGGGAAGTTCGACGATGGGGCGACGGCGGGGTAGGGTTTTTCCGTCGAGTTCCAACGGCGAGAGCAGAGGAAACG
GGTCAGAGAGACCAAACCCAGAAGGAGCACC------GAGTGTCTTACGCTGACGCTGTCACATTTGACGGCCAGATGCG
GCCGGGTCAGATC-CGACGGTCCAGAACGCCGCGTCTCAGGGCTATTACTCCCCCGCAGCTCACGGTGCGAGGCATCCAT
CGATTAGCAGCAATCGCCGTTCCCGACTCGGCGAAAGGATTGTCTCGCCGCCGCCGCCGCC---------GGACGAGGAG
GAGGAGAGGCCGAGATGTTCTTCCACATCGTGCTGGAGCGGAACATGCAACTGCACCCGCGGCACTTCGGCCCGCACCTC
CGCGACAAGCTCGTCGCCAAGCTCATGAAGGACGTCGAGGGCACCTGCAGGTAGGGTTCCGTCGCGCGCGCTCGCTTCCG
CCA-------CCCCGCGGTTCGCTCAACCCTAGGGCTGGCTTCCTCGCAGCGGGCGGCACGGGTTCGTCGTGGCGATCAC
GGGGGTGGAGGACATCGGCAAGGGGCTCATCCGGGAGGGCACGGGCTTCGTCACGTTCCCCGTCAAGTACCAGTGCGTCG
TCTTCCGCCCCTTCAAGGGCGAGATCCTTGAGGCCGTCGTCACCATGGTCAACAAGGTGGATTTTCACTCGCCTTCTTCA
CAGTTGTGTCATGTGCTCAGTGCCTG----------------GTTTACTGACTTGGGTTGT-----TTGTTGGTTCTGCA
GATGGGGTTCTTCGCAGAGGCTGGGCCTGTGCAGATCTTTGTGTCAAACCATGTGAGTGACTTGCCATCAATTGGAGCTG
CTTTGCCAAATTGGTGGAATAAATCGATAAAATTTAGAATTTCTTGGTGGTTAATAGTTCAGTGCAAGCTCTTGCATCTT
GATTTAGTTGTGCCGTGGACTCGAATTGTGTCGGTTCACGTAAAAATTAAGTGTGCTTGTGTGTTGTTCTGTTTCTGTAT
GCAGTTGATTCCTGACGATATGGAGTTCCAGTCTGGTGATGTGCCAAACTACACAACTTCTGATGGATCGGTATGCTTCT
TTCTGC--ATAAGTGGTTCTTGCTATTTTTCTCATCTTCGGTAACTACTAGCTAAGTGTCCTGCTTGTTACTATGGACTT
CACCAATACAGGTTAGGCTTTAAAATCATGTACTAATATGACTTCACGAATACAACTCAGACATAAAACACGTTAAATAT
TTACTTAGACTAATCTCTTTTGACCTTCATATTTTT-GTAAATATGTCAAATTTACACTGCTTTTCCTTTCTAAAAGGAA
CGAAAAATTGTTTAGAGTTGTATAAGAGGTCCTTTGGCTTG-TGAGAAATTAAATCAAGGAGATACCACATGTCACAATT
-------------------------------------------AATAATTATGGTATCTTAATTTACTAAAAATGAAGGA
A-TTTTTGTTTAGTTTGTTAAGAGTTGCACAAAAGGTTGATCGGTTTGGTGAGATAATAAAGAAAAGAAACAAACTGCAC
AAG-AAAAATATGGGATAAGAAGA-TTACAAGCAGGCATATTTTATTTTGTGTGAGTGAGGTGAGCAACGTACCAGTGCT
GCCTCCAACCACCATCACCAAC------TTATGTTATGGTAAAATAAATTTAAATATATAAAGATAAGGACTATTGGGTA
CTGGTAGGTCATGAAGTATCCACTTGTTGGTTTACTCTTATTGTGGCACCTTGGAAATGAAATTGTGTGTGCTTGTATTA
TTATTCC---GGC-TATAATGGTGGGATCCATGTGCTATATGAATTTATGAATGCTTGTTGCAAACATGAATATGTCTAT
ATAAATACTCTCTCAAAGAAGAATATGAATGGGTATCATTATGAAATATAAAAGAGATTGTTCTGTTGAAAATGATTTTC
TTTATTATTTTCTTTGTGTTAAGTGGGAGTTGCTTGTTTGTCTGGTTCAGGTGAAAATTCAAAAAGAAAGTGAGGTTCGT
CTGAAGATTATAGGCACTCGTGTTGACGCAACAGAAATTGTAAGTTGGTTACCCTTTATTTTATGGAAGTTTCTGAATTG
GAAGTGCTCAAGTCCTTTAGAATTCTGTGGCAGGACCTCTGAGTAGCTACCATATGTTACTGATATTCGACTTGATGATC
TAATTCCATATGA-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------AGTACCATTAAGATCATTGCATACAATTCGTTCTAGTCTCTAATTACCTACCATGAACAGGC
ATGTGTAGTTTTGTTCGCAAATAGCAATCTTGATATAGCTTGCTTAATCAGTCCAAGAAAACCAGCATATGACCATGAAT
TTAAGATGCAAATAAGATCGCTTTTTTGTGGTGTAAAATTTGATGTTCTTTCCTCTGGCATATGTTGTAACTACACGAGG
CACATAAACTGATAGTGTGCTAATCTATGAGAAGATGTTTGGCAAAAATGTTGAATATTTTCCTGGATTTTTGTCTTCCT
GGACCATAATCAGATACCAAAAATAAGAAAGACAATTTCATCATGAAACTACAATTGCATATATGTATCCATCCTCTCAT
CTTTTAATCTTGGATGCACCATTATCTTATAGTTGATTCTTTTTTTGTATCAGTTTTGCATCGGCACGATAAAAGACGAC
TTTCTGGGCGTTATCAGTGATCCTGGTGGAGCGCTGTAAATGATCCAAACAAGACTCAGCATGGTCTCCAACTTCCGCAT
CATGATATATATCTGGGAAGAGTCCCCAAGGAAGGTTGCGACTGGCCTGTAATTTGTGTCCTGATGTAAAATGTGATGTC
ATGCTTATCTAATGGAAGCCAGGGTCCTAATACTTTTAAGAAAAAGTAACTGGCACCTGTAATATCATAACTAGGATCTT
TTTTAACTGTGGTGGTTGACATGTTTGGATTCAAGCAGTTGTCTGAACTTTCAGACCAGATTGTGC-AACCATGCATCGC
ACCTA-ATCACTTTGTCTCGCATTTGAAGATGGTAATTGGTGGTGGTTGTTCT--AAGTCATATAACTAAAATGAATGGA
AGTACAAGTCAATGCTCTCAAGTGCGATGAAAGTATCTTCTCATATAAATTTGATACACTGATACTTGAGGTTGTTCCAT
CTTTGACAACACTGCACTAATAAACGGGCTAATAAACACCATTCGCTTTCACTAGCGTCAGCTGTACCCTTCCATGACCA
CACGCAGGTTGTGCCCCTAAAATGGTTAATGGTCATTTGACCTAGCACCTGCGCAGAAAACAACTGAAATCAGCTGATGC
AATATGTAACCTACTTCAAATGTA---------------------------------------------------ACACT
GATGCCCTCCTTTGCATATGGAGCGCATATAGCTCACCTGCTTAGAACCCAATGTGAGTGTAAACGGTTTCTGGATGTTA
TTCTTTTGTCCACGCGAGTCACGCTGTACAAAGAAATTACAAACTGGCTCTTGGCCACTGTCCATGCTACTGCTTTGTTT
CCACTTGCCGAATGTGCTGCTCCCATTAAGTCCCAAAATTGATTGTGTAAATCACAATTTTGAGCAACATGTGGGGTATG
ATGGCCACATGACAATCTAGAACAGCTCCTGAAACCATCAAGAAGATGTTAGTAAGTTCACATGAA-CACCACGATTATG
AAATAT----GAGAATAGCTCTTGAGTACCTGATACCATCAAACCAATCTTTCTGAAAAGGAAGCCAGG
>chr1A_1
AGTTTGTGAATGACATCACAGTGAAACGGTTAGCGTTCCCTCGAAAATTTGAGCATCAATTTGCAATCATATAGCAAAGT
GCAGAGCACCT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TAGTCACACACTGATACAACAACGGAGCAAGGG--CCATTCCTACTGACCTTGTGAATGTCGATACA
TGGCCTGAAGCTGACGGCGCACGCGACGGCACGCCCTCCTGCCAAAACGCACGGCCAATCTCATATTCCCGGCCAGACAC
CGCAACATTGCATCTGAAGCAAGCAACAGAGATATTCAAAGGGGGGAA-AACATACTTGACGCGCCGGATTGCGCCGGGC
GTGCCGAGACCCGCGAGCTCGCCCAACCGTGCTGCGGCGCCGCGCACGGCGGGTGCGGAAGCCTCGCCGCGCACCTCGAC
GCCATCGGGAAGTTCGACGATGGGGCGACGGCGAGGTAGGGTTTTTCCGTCAGGTTCCAGCGGCGAGAGCAGAGAAAAAG
GATCAGAGA--CCAAACCGAGGAGCACTAGTAGGGGTGAGTGTCTTACGCTGACGCTGTCCCATTGGACGGCTGAGACGC
GCTGGAGGTCAGATCGACGGCCCAAAGCGTCGCGCCTCAGGGCTATTACTCCCCCGCAGCTCACGGGGCGAGGCATCCAT
CGATTAGCCAG------CGTTCCCGACTCGGCGAAAGGACTGTCTCGCCGCCGCCGCCGCCGCCGGCCGACGAGGAGGAG
GAGGAGAGGCCGAGATGTTCTTCCACATCGTGCTGGAGCGGAACATGCAGCTGCACCCGCGGCACTTCGGCCCGCACCTC
CGCGACAAGCTCGTCGCCAAGCTCATGAAGGACGTCGAGGGCACCTGCAGGTAGGGTTCCGTCGTTCTCGCTCGCCCGCC
CGCCCGCTCCCCCCGCGGTTCGCTCAACCCTAGGGCTGGCTTCCTCGCAGCGGGCGGCACGGCTTCGTGGTGGCGATCAC
GGGGGTGGAGGACATCGGCAAGGGGCTCATCCGGGAGGGCACGGGCTTCGTCACGTTCCCCGTCAAGTACCAGTGCGTCG
TCTTCCGCCCCTTCAAGGGCGAGATCCTCGAGGCCGTCGTCACCATGGTCAACAAGGTGGATTTTCACTCGCCTTCTTCG
CAAGTGCGTCATGTGCTCAGTGCCTGC--------GTGCCCGGTTTACTGACT-GGATTGTTTATCTTGTTGGTTCTGCA
GATGGGGTTCTTCGCTGAGGCTGGGCCTGTGCAGATCTTTGTGTCAAACCATGTGAGTGACTTGCCATCAATTGGAGCTG
CTTTGCCAAATCGGTGGAATAAATCGATAAAATTTAGAATTTCTGTGTGGTTAATGGTTCAGTGCAAGCTCTTACATCT-
GATTTGGTTGTGCCGTGGACTCGAATTGTGTCGGTTCACTTAAAAATTAAGTGTGCTTGTGTGTTGTTCTGTTTCTGTAT
GCAGTTGATTCCTGACGATATGGAGTTCCAATCTGGTGATGTGCCAAACTACACTACTTCGGATGGATCGGTATGCTTCT
TTCTGCATATAAGTGGTTCTTACTGTTCTTTTTATCTTTGGTAACTAC----------CCCCGCTTGTTACTGCGGACTT
CACCAATACGGCTTCATGTCATGTAAAAAT-----ATATAGCTTTACCAATACAACTTAGGCTTAAAACACG--------
TTACTTGGACTAATCTCTTTTGACCTTTATATTTTTTGTAAATGTATCAAATTTACACTGCTTTTCCTTTCTTAAAGGAA
GGAAATTTTGTTTAGAGTTTCATAAGAGGTTGTTTGGCTCGTTGAGAAATTAAATCAACGAGATACCACATGTCACAATT
TATTGAGAAATTAAATCATGAGATACCACATGTCACAATTAATAACTATGATATCTTATTAGTTTACTGAAAATAAAGGA
ATTTTTTGTTTAGTTTGTTAGGAGTTGCACAAAAGGTTGCTCAGTTTGTTGAGAGAATAAAGAAAAGAGACAAAGTACAC
AAGAAAAAATATGGGATAAGAAGGTTTACAGGTAGGCAAATTTTATTTTGTGTGAGTGAGGTGAGCAACGAGCCACTGCT
GCCTCCAACCACCATCACCAACTCCCTTTTATGTTATGGTAAA-TAAATGTGAAGATAAT---ATAAAGACTACTGGCTA
CTGGTAGGTCATGAAGTATCCACTTGTTGGTTTACTCTCATTGTGGCATCTTAGAAATGAAAT--TGTGTGCTTGTATTT
TTTTTCC---TGCATATAATGGTGGGATCCGT-------------------ATGCTTCCTGCAAACGTGGATATGTCTAT
ATAAATATTCTCTCAAATAAGAATATGAATGGGTATCGTTATGAAAT-TAAAAGGAATTGTTCTGTTGAAAATGATTTGC
AATGGTATTTTCTTTGTGTTAAGTGGGAGTTGCTTGTTTGTCTGGTTCAGGTGAAAATTCAAAAGGAAAGTGAGGTTCGT
CTGAAGATTATAGGCACTCGTGTTGACGCAACAGAAATTGTAAGTTGGTTACCCTTTATTTTATGGAAGTTTCTGAATTG
GAAGTGCTCAAGTCCTTTAGAATTTTGTGGCAGGGCCTCTGAGTAACTACCATATGTTACTGATATTCGACTTGATGATC
TAATTCCATATGA-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------AGTACCATTAAGATCATTGCATACAATTCTTTGTAGTCTCTAATTACCTACCATGAACAGGC
ATGTGTAGTTTTGTTCGCAAATAGCAATCTTGATATAACTCACTTAATCAGTCCAAGAAAACCAGCATATGACTATGAAT
TTAAGATGCAAATAAGATCTCTTTTTTGTGGTGTAAAATTTGATGTTCTTTCCTCTGGCATATGTTGTAACTACCCGAGG
CACATAAACTGATAGTGCACTAATCTATGAGAAGATGTTTCACAAAAATGTTGAATATTTTCCTGGATTTCTGTCTTCCT
GGACCATAACCAGATACCGAAAATAAGAAA-ACAATTTCATCATGAAACTACAATTGCATATATGTATCCATCCTCTCAC
CTTTTAATCTTGGATGCACCATTATCTTATAGTTTGATTCTTTTTTGTATCAGTTTTGCATCGGCACGATAAAAGACGAC
TTTCTGGGCGTTATCAGTGATCCTGGTGGAGCGCTGTAAATGATCCAAACAAGACTCAGCATGCTCTCCAACTTCCGCAT
CATC--ATATATCTGGGAAGAGTCCCCAAGGAAGGTTGCGACTGATCTGTAATTTGTGTCCTGATGTAAAATGTGATGTC
ATGCCTATCTAATGGAAGTCAGGGTCCTGCTAGTGTTAA-AAAAAGTAATTGGCACCTGTAATATCATAACTAGGATCTT
TT-TAACTGTGGTGGTTGATAAGTTT----------AGTTGTCTGAACCTCCAGACCAGATTGTGCCAACCATGCATCAC
ACCTACATCACTTTGTCTCACATTTGACGATAGTAATTGGTGGCAATTGTTTTAAAAGTCATA--ACTAAAATAAATGGA
AGTACAAGTCAATGCTCTCAAGTGCGATGAGAGT--------------ATTTGATACACAGATATTTGAGGTTCTTCCA-
CTTTGACAACGGTGCA------------CTAATAAACACCATTCGCTTTCACTAGCGTCAGCTGTACCCTTCCATGATCA
CACGCAGGTTGTGCCCCTAAAACGGTTAGTGGTCATTTGACCTAGCACCTGCGCAGAAAACAACTGAAATCAGCTGATGC
AATATGTAACCTACTTCAAATGTACTCCCTCCATCCAAAAAAGCTAGGGACAAGCTTTTTCGGACGGAGGGAGTAACACT
GATGCCATCCTTTGCATACAGAGCACATATAGCTCACCTGCTTAGAACCCAACGTGTGTGTAAACGGTTTTTGGATGTTA
TTCTTTTGTCCACGTGAGTCACGCTGTACAAAGAAATTACAAACTTGTTCTTGGCCACTGTCCATGCCACTGCTTTGTTT
CCACTTGCCGAATGTGCTGCTCCCGTGATGTCCCAAAATTGACTCTGTGAATCACAATTTTGAGCAACATGTGGGGTATG
ATGGTCACATGACAATCTGGAACAGCTCCTGAAACCATCAAGA---TGTTAGTAAGTTTGAATGAACCACCACGATTATG
AAATAT----AATAATAGCTCTTGAATACCTGATACCATCAAACCAATCTTTCTGAAAAGGAAGCCAGG
>SNPs
-------------------------------S----------------S-----------------------------S-
--------------S---------SSSSSSSSSSSSSSSSSS--------------------S-----------------
----S-SSSSSSSS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS-------------S---------------------S------S--------------
-------------------------S------------------------------------------------------
------------S--------S--------------------S-------------------------------------
--S----------------S-------S-----------------S----------------------------------
--------------------------S-------------------------------------S---------------
--------------------------------------------------------------------------------
------------------S----------------------------------------------------------S--
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
----SS-------------------------------------------------------------------S------
--------------------------------------------------------------------------------
---S--------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
-------------------------SSSSSSSSSS---------------------------S-----------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
---------------S--------S-----S-------S-----------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------S-S---------------------------------
----------------------------------------------------S-------------------------SS
-------------S----------------------------------------------------S-------------
-----------------------------S-S------------------------------------------S-----
--------------------------------------------------------------------------------
---------S-----S-------------------S---------S------SS--------------------------
----------------------------------------------------S----------S--S-------------
-------S------------------------------------------------------------------------
-------------------------------------S------S-----------------------------------
------SSSS----------S-SS--------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
---------------------------------------------------S-----S---------------------S
S-------------------------------S-----------------------------------------------
-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS--------------------------------------------------------------
-------------------------------S------------------------------------------------
----------------------------------S------------------------------------S--------
-------------------------S--------------S---------------------------------------
-------------------------------S-----------------------S------------------------
-------------S-----------------S------------------------------------------------
--------S----------------------------------------S-------S----------------------
--------------------------------------------------------------------------------
-------------------------S-------------S---------------------S----S------S------
--S---S------------------------------------------------------------S------------
-S-----S-----SS-----------------S-----------------------------------------------
-S-------------------------------------S---------------------------S----------S-
-------------------------S------------------------------------------------------
--S-----------------S-------------------------------S-----------------S---------
-----------------------------------------------------------------------------S--
----------------------S---------------------S--------S---S----------------------
-S---------------------------------------------------S--------------------------
---------------------------------S-------S--------------------------------------
----------------------------------S--------------------------------------S------
-----SSSSS------------S----------------------------------------------
>forward_180
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
ACTACTCCCTCCGTTCCCAA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
>reverse_1473
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TCAGTGCCCGGTTTACTGAC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>forward_1468
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TCATGTGCTCAGTGCCTCAG----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
>reverse_3120
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
GTATTTCCGGACGGAGGGA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>forward_2992
--------------------------------------------------------------------------------
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------------AAGTACTCCCTCCGTCCCAA------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>reverse_4454
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------TCCACTGTCCATGCTACTGC-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------
