>input_sequence_31606
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----------------------------------------------------------ATGGAGCCGGAGGGGGTGCGGC
ACCGGATGGTGGAGGTGGCGAAGGGGGTGCGGCTGCACGTGGCGGAGGCGGGGCCCGAGGACGGCCCCGCGGTGCTGCTC
GTGCACGGCTTCCCGGACCTCTGGTACGGCTGGCGCCACCAGATGGCCGCCCTGGCGGCCCGGGGCTTCCGCGCCGTCGC
GCCCGACATGCGCGGCTACGGCGACTCTGACGCCCCGCCCTCCGCGGGCTCCTACTCCATCTTCCACCTCGTCGGCGACC
TCGTCGCCCTCGTCGCCGACCTCGGTCAGCCCCAGGTCTTAGCATCGAACCCGTTCTCCCTTCGAGACCCCTCACGCCTG
CCATGCTCCTTGCTAAGATTGCTGTTCAATTCTCGGGCTCGCGTGGCAGGTGTTCGTGGTTGGGCACGACTGGGGCGCAC
TCGTGGCATGGCAGCTCTGCCTGCTCCGCCCGGACCTTGTGCGGGCGCTGGTTAACCTCAGCGTGGCCTACCACCCGCGC
AGCTCCGAGGGGAGCCCGCTCCAGGTCATCAGGGCCTTGTGCGGGGAAGACCACTACATGTGCCGTTTCCAGGTGGAGCC
CTTCATCTCCTTTCTGTCCTGCTTATGGCAGACAGAATCAATGTCATTATGAGTTGTGTTCATCTGTCCTGACGACTTTA
CTGGATAGGGGTCTGTTTACTGGTCGTGGCGAAACAATTGAACCAGTTCATAGTTGTTGGCATAATTTCGTATATTAGAC
GATTGTCTTCATGGTGGGCTGTTCGTGATGCTTACCAAGGGATCTAACCAAACTAGATTATTCGAACTTCGGAATTCCAG
ATAGATAACAATGGAGAAATGATAATAAACAAGAAATATCGGTATATTGGATTGGAGGTTGAGTAGTGT-----------
--------------------------------------TTTTCACTAAGGAAATTGAGTTATTGGTTCAATTGAAATTTG
ATACTTTGTATTGTCTTTTTTGAAGCTGGTAACTTAAACATTATCGCATTCCTGAGATACATAGTAGGTAAAACCATTGT
TTCTTGAAATATGCCAAATTTACTTGTTGAAGCTTTATTTGCTATGCAATTACACCTATGTCCTTATAAGGTTAAGAACC
CGAGTACCTTAAGTACTATAAATCTTCAGTAACAAACTTTAGTTCTTATTGACATTGTGCTTTTGTTGAAACCCAAAAAT
TACAGTATCACATTTTCAAGATATGGAGTGTGCAAGGCTCCAAGTAAAAGCATTTTCTTGAAAGACACCATGCTTCGCAA
ACAACAACACGGATCTTTATCTTTACTCTTATAAAGATTTCACTCGGTGATGGCGGTCTGCTCACTTTCAGGCCACATCA
CATGTTTGACATGACAAATGCCTGATATGTGAGCAGATGTAGATGATTTGGTCTTGTTTTAATCCATTTTGATTTGTAGC
AACACAAGGAATTGAACGTGTATCCGTAAGTATATGGGAAAACATCTCTATAACAAGCACAAAAGAAAT-TCAGGGAACA
CACAACATCCCTTTTGCAGAGCTGTAAATAACAATACGGAGTATTACAGTGATTACAGTTAGCCTTAAAAACATTCAACT
GACTGACAGATTATAGTTGTCTATCTTGTCATCGCCTGGAATTTTTTTTCGAGTATAGGACTTCAACAATTCCTACCTGC
AGACTCAGGTTTAAAAGTATCTCCTGACACAGTACTAGATATTGCTGTTTAATTGCTTATTCTTAGATACAGTTTTCGTC
TGCACCAACATCGCTTCAGATTTGGTTTGTCGGAAACAGTCGTTCATATGCATTACTGAATTATGCATGCAGGAGCCTGG
AGTCGCTGAAGCTGAATTTGCTCTATACGACAATAGTCATAAGTTTAAGACGGTCTTTGGAATGCGCAAACCAGCTCCTC
CTATTCTACCCAAGGACAAGACCTTCTTTGACTCACTAGATTCGGATGGTACTTGCCCTCCATGGTTGTCTGAAGAAGAT
ATTTCCTACTATGCAGACAAATTTGAGAAGACAGGGTTTACAGGAGGGCTTAACTACTACAGATGCATGGACTTGTATGT
CACCTACGTCCCATTCTCACTGTCTTGGTTTTACTAACTTTG--------TACTAAAGTTAGTATAAACCTGGGTCATCA
ATTTTGGAACGGAGGGA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------GTATATACGTATGTCTG-AACTACATATCTGATTGCGCCAACT
TCAGTTCATAAGTTTTATGGGTGAAATCATTTCACCAGAGTTAACGCATGCATTAGATCTGGCTCAACTTACTTGCGTGT
TCATGCAGGAATTGGGAGCTTTCTGCACCATGGACTGGAGCTCCAATAAAAGTAGCAACAAAATTCATCGTTGGGGACCT
TGACGTTACATACAATGTACCGGGAGTGAAAGACTACATTCACAAGGGTGGCTTGAAAGCGAGCGTGCCGAATCTGGAGG
ATGTGGTTGTCATGGAGGGAGTGAGTCACTTCTGCAACCAGGAGAAGCCTAATGAGGTTTCAGATTACATCTGCGAGTTC
TTCAGCAAGTTCTGA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>chr3B_1_TraesCS3B01G204900
GAGTTCGACTCGTTTATTAAGAGTTGTAGCCCGCATATGTGTGTTTCAGATTCTATAGTACTCGGTTCTTCTGTTCGACG
AGTTCTGATTTTCCTTTTACGTTGACATATTTGAATTGGATTTTCTTTCACCACTACTATTGTAATGCACAAAAAACACT
GACGTTTCCGCTCGCTTTCAACCACTGCCACTTTACCTGAGCACTGTGACGCAGTCGGTCAAGTATTGAGTTTCTGCTAG
TATATCAAGGTGCTATCGCTATGCTCATGTCTCCCTTCCCTCCTCCAGGTGAGAAGCTGGTGTTGAGAAATGACATCCAA
TCTTTTGGTATCGATCATATATGTTAGGTGGATAACTTTTTTTCTTCAACAGAAATGAGCTGATCTAGTGTTTTTAAATG
ACCTTCCCCGATCAAAGAAGGGCAAAAACTCTCTCGAACAGTGAGGAGCACAACGCCGGGTCGGGACTCAACAGAATTTG
GTGAAGTGTTTGTTCCTGAACGAGGGAAGTGGAAAGACAAAGAGGAATAGAGAGCTCACCTCCTTTTTTGTAATCGCCGT
AATTGTACGACGACCCTTCTTGTTCCAAGCATACAACCCTGAGACGTGACGGTGTAGATGCTCTAATGGTGTTGGGGCTT
TGAGGCGATGCGTGAATCGCTTCTTTAAAGCTCTTGTAAACTTTCTGACCTCCTTCTATAATGTTTGGCCTACTCTCGAA
AAATAAAAGTCTACGAACGACGAGGAAAGAGAGCCGCGACATCCGGTCCAGTCAAATCCAAGTA----------------
TCCAAGTCCAAGGTGTGCGAAATTTCGGCAAGCTGCCAAAAACTCCTCTTGCCGGCGCCCGTCCGGCCGCCCC-CACAAG
CCACGAAATCCTCGCCCATTTAGCCACACAGCCAGCGGCCGGCGACGCACCCGAAGCAGCGCGCGCAGGCTACC-CCAAA
ACCACCGGATAGTCAATCCCTCGGCGGTCCACGAGCGCGAGAGGAAGCAGCGGCAGCGATGGAGCCGGAGGGGGTGCGGC
ACCGGATGGTGGAGGTGGCGAAGGGGGTGCGGCTGCACGTGGCGGAGGCGGGGCCCGAGGACGGCCCCGCGGTGCTGCTC
GTGCACGGCTTCCCGGACCTCTGGTACGGCTGGCGCCACCAGATGGCCGCCCTGGCGGCCCGGGGCTTCCGCGCCGTCGC
GCCCGACATGCGCGGCTACGGCGACTCTGACGCCCCGCCCTCCGCGGGCTCCTACTCCATCTTCCACCTCGTCGGCGACC
TCGTCGCCCTCGTCGCCGACCTCGGTCAGCCCCAGGTCTTAGCATCGAACCCGTTCTCCCTTCGAGACCCCTCACGCCTG
CCATGCTCCTTGCTAAGATTGCTGTTCAATTCTCGGGCTCGCGTGGCAGGTGTTCGTGGTTGGGCACGACTGGGGCGCAC
TCGTGGCATGGCAGCTCTGCCTGCTCCGCCCGGACCTTGTGCGGGCGCTGGTTAACCTCAGCGTGGCCTACCACCCGCGC
AGCTCCGAGGGGAGCCCGCTCCAGGTCATCAGGGCCTTGTGCGGGGAAGACCACTACATGTGCCGTTTCCAGGTGGAGCC
CTTCATCTCCTTTCTGTCCTGCTTATGGCAGACAGAATCAATGTCATTATGAGTTGTGTTCATCTGTCCTGACGACTTTA
CTGGATAGGGGTCTGTTTACTGGTCGTGGCGAAACAATTGAACCAGTTCATAGTTGTTGGCATAATTTCGTATATTAGAC
GATTGTCTTCATGGTGGGCTGTTCGTGATGCTTACCAAGGGATCTAACCAAACTAGATTATTCGAACTTCGGAATTCCAG
ATAGATAACAATGGAGAAATGATAATAAACAAGAAATATCGGTATATTGGATTGGAGGTTGAGTAGTGT-----------
--------------------------------------TTTTCACTAAGGAAATTGAGTTATTGGTTCAATTGAAATTTG
ATACTTTGTATTGTCTTTTTTGAAGCTGGTAACTTAAACATTATCGCATTCCTGAGATACATAGTAGGTAAAACCATTGT
TTCTTGAAATATGCCAAATTTACTTGTTGAAGCTTTATTTGCTATGCAATTACACCTATGTCCTTATAAGGTTAAGAACC
CGAGTACCTTAAGTACTATAAATCTTCAGTAACAAACTTTAGTTCTTATTGACATTGTGCTTTTGTTGAAACCCAAAAAT
TACAGTATCACATTTTCAAGATATGGAGTGTGCAAGGCTCCAAGTAAAAGCATTTTCTTGAAAGACACCATGCTTCGCAA
ACAACAACACGGATCTTTATCTTTACTCTTATAAAGATTTCACTCGGTGATGGCGGTCTGCTCACTTTCAGGCCACATCA
CATGTTTGACATGACAAATGCCTGATATGTGAGCAGATGTAGATGATTTGGTCTTGTTTTAATCCATTTTGATTTGTAGC
AACACAAGGAATTGAACGTGTATCCGTAAGTATATGGGAAAACATCTCTATAACAAGCACAAAAGAAAT-TCAGGGAACA
CACAACATCCCTTTTGCAGAGCTGTAAATAACAATACGGAGTATTACAGTGATTACAGTTAGCCTTAAAAACATTCAACT
GACTGACAGATTATAGTTGTCTATCTTGTCATCGCCTGGAATTTTTTTTCGAGTATAGGACTTCAACAATTCCTACCTGC
AGACTCAGGTTTAAAAGTATCTCCTGACACAGTACTAGATATTGCTGTTTAATTGCTTATTCTTAGATACAGTTTTCGTC
TGCACCAACATCGCTTCAGATTTGGTTTGTCGGAAACAGTCGTTCATATGCATTACTGAATTATGCATGCAGGAGCCTGG
AGTCGCTGAAGCTGAATTTGCTCTATACGACAATAGTCATAAGTTTAAGACGGTCTTTGGAATGCGCAAACCAGCTCCTC
CTATTCTACCCAAGGACAAGACCTTCTTTGACTCACTAGATTCGGATGGTACTTGCCCTCCATGGTTGTCTGAAGAAGAT
ATTTCCTACTATGCAGACAAATTTGAGAAGACAGGGTTTACAGGAGGGCTTAACTACTACAGATGCATGGACTTGTATGT
CACCTACGTCCCATTCTCACTGTCTTGGTTTTACTAACTTTG--------TACTAAAGTTAGTATAAACCTGGGTCATCA
ATTTTGGAACGGAGGGA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------GTATATACGTATGTCTG-AACTACATATCTGATTGCGCCAACT
TCAGTTCATAAGTTTTATGGGTGAAATCATTTCACCAGAGTTAACGCATGCATTAGATCTGGCTCAACTTACTTGCGTGT
TCATGCAGGAATTGGGAGCTTTCTGCACCATGGACTGGAGCTCCAATAAAAGTAGCAACAAAATTCATCGTTGGGGACCT
TGACGTTACATACAATGTACCGGGAGTGAAAGACTACATTCACAAGGGTGGCTTGAAAGCGAGCGTGCCGAATCTGGAGG
ATGTGGTTGTCATGGAGGGAGTGAGTCACTTCTGCAACCAGGAGAAGCCTAATGAGGTTTCAGATTACATCTGCGAGTTC
TTCAGCAAGTTCTGATTATATCAAGAGAGTCTTGGCGAACCTACTTGTTTCGGTGCTGTTTATGTACTTATAAGTTGTCG
ATTACACATGCCATGATACTGAATTATCTCTAAATAAAACCATGGTCTGATTGTCACAGAAGAATTTCTGTGAACTCTCG
TGTCCTCCTGTTTCTATGCAGAGGGTCAAAGTGTAACCTGTGGGCAGCAGTGAAATCTTAGCAGCTGAAACCGGTAGAAA
AAACCCACCAGATTACCGTTTCTTCTTTATTCGGGCCTGTCTTTTGGACCTC-TTTTTTCTTTTGGTTAGGTTCATACTG
AGGTAGTGGACAAACATATGGGAAGAATATTGGCAGGGGCAAATTTCCTATTATTGTGGGCAAATAGAATTGCTTTACTT
GTTAAATTAAGTTCAACTTCAAACTTACAAAAAA-TATTGCAAAAATAACGTAAACTCTTCCATTGAAGGCTTGTGTTTT
ACTTTTAGGCTAGTTGAAGCAGTTG----------TCTGAAACACCTCTGCCTCTAGGGCAGCTGAGTTTTGCCGTGAAA
ATCTTCAAAGGGATGTACGGCTCCGCTGCCTCTGCAACTCAACCGTTCCAATGCTGACCTGCAGAGGGAAATTTGTTAGT
TTCTGGCGTAGCTAGGTGTTTCATGAGTAGTTGATGAACATGCTGAACTGCGAGTAACTTCACATTATAGAATACAACAA
CAACAACAACAACAACAAAGCCTTTAGTCCCAAACAAGTTGGGGTAGGCTAGAGGTGAAATCCATAAGATCTTGCGACCA
ACTCATGGTATGAGGCGCGTCGTTGAGAGGCTTACGCCCCAACGAAAATCTTTTGGGTCTTCACATTATAGAATAGCGCC
TTTTTTTTAACACTACGATCAACAGTCTGGGAAGCAGATTGTCGATGATCTTGGCGTTGTTCACTGGTTTTCTTTGTTTT
TTTCTTTTTCAAGTTTATTTTCCTTTTCCTTTGTTTAGAAATTTCAAAAAATGTTCATGTTTTCATT
>chr3D_727
AAGTCTACGAAC--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------GACGAGGAAAGAGAGCCGCGACACCCGGTCCAGTCCA--------A----------------
TCCAAGTCCAAGGTGTGCGAAATTTCGGCAAGCTGCCAAAAACTCCTCTTGCCGGCGCCCGTCCGGCCGCCCCACACAAG
CCACGAAATTCTCGCCCGCTTAGCCACACAGCCAGCGGTCGGCGACGCACTCGAAGCAGCGCGCGCAAGCTACCCCCAAA
CCCACCGGATAATCATCCCTTGCGCCGGCCACGAGCGCGAGA-GAAGCAGCGGCAGCGATGGAGCCGGAGGGGGTGCGGC
ACCGGATGGTGGAGGTGGCCAAGGGGGTGCGGCTGCACGTGGCGGAGGCGGGGCCCGAGGACGGCCCCGCGGTGCTGCTC
GTGCACGGCTTCCCGGACCTCTGGTACGGCTGGCGCCACCAGATGGCCGCCCTGGCGGCCCGGGGCTTCCGCGCCGTCGC
GCCTGACATGCGCGGCTACGGCGACTCCGACGCCCCGCCCTCCGCGGGCTCCTACTCCATCTTCCACCTCGTCGGCGACC
TCGTGGCCCTCATCGCCGACCTCGCTCAGCCCCAGGTCTTAGCATCGAACCCGTTCGCCCTTCGAGATCCCCCACGCCGG
CCATGCTCCTTGCTAAGATTGCTGTTTCATTCTCGGGCTCGCGTGGCAGGTGTTCGTGGTTGGACACGACTGGGGCGCAC
TCGTGGCATGGCAGCTCTGCCTGCTCCGGCCGGACCTTGTGCGGGCGCTCGTTAACCTCAGCGTGGCCTACCACCCGCGC
AGCTCCGAGGGGAGCCCGCTCCAGGTCATCAGGGCCTTGTGCGGGGAAGACCACTACATGTGCCGTTTCCAGGTGGAGCC
CTTCATCTCCTTTCTGTCCTGCTTATGGCAAACATAATCAATGTCATTATGAGTTGTGTTCATCTGTCCTGACGACTTTA
TTGGATAGGGGTCTGTTTACTGGTCGTGGCAAAACAATTGAACCGGTTCATAGTTGTTGGCATAATTTCGTGTGTTAGAC
GATTGTCTTCATGGTGGGCTGTTCGTGATGCTTACCAAGGGATCGAACCAAACAAGATTATTCGAACTTCGGAATTCCAG
ATAGATAACAATGGAGAAATGGTAATAAACAAGAAATATCGGTATATTAGATTGGAGGTTGAGTAGTGTTTTTTTTTCTC
CAATACGCCTGGGAGCGTATCATTGCATTGAGTAGTGTTTTTCACTAAGGAAATTGAGTTATTGGTTCAATTGAAATTGG
ATACTTCGTATTGTCTTTTTTGAAGCTGGTAACTTAA-CATTATCGCATTCCTGAGATACATAGTAGGTAAAACCATTGT
TTCTTGAAATATGCCAAATTTACTTGTTGAAGCTTTATTTTCTATGCAATTACACCTATGTCCTTATCAGGTTAAGAACC
CGAGTACCTTAAGTACTATAAATCTTCAGTAACAAACTTTAGTTCTTATTGACATTGTGCTTTTGTTGAAACCCAAAAAT
TACAATATCGCATTTTCAAGATATGGAGTGTGCAAGGCTCCAAGTAAAAGCATTTTCTTGAAAGACACCATGCTTTGCAA
ACAACAACACGGATCTTTATCTTTACTCTTATAAAGATTTCACTCGGTGATGGCGGTCTGCTCACTTTCAGGCCACATCA
CATGTTTGACATGACAAATGCCTGATATGTGAGCAGATGTAGATGATTTGGTCTTGTTTTAATCCATTTTGATCTGTAGC
AACACAAGGAATTGAACGTGTATCCGTAAGTATATGGGAAAACATCTCTGTAACAAGCACACAAAAAAA-TCAGGGAACA
CACAACATCCCTTTTGCAGAGCTGTAAATAACAATACGGAGTATTACAGTGATTACAGTTAGCCTTAAAAACATTCAACT
GACTGACAGATTATAATTGTCTATCTTGTCATTGCCTGGATTTCTTTTTCGAGTATAGGACTTCAACAATTCCTACCTGC
AGACTCAGGTTTAAAAGTATCTCCTGACACAGTACTAGATGTTGCTGTTTAATTGCTTATTCTTAGATATAGTTTTCGTC
TGCACCAACATCGCTTCAGATTTGGTTTGTCGGAAACAGTCGTTCATATGCATTACTGAATTATGCATGCAGGAGCCTGG
AGTCGCTGAAGCCGAATTTGCTCTATACGACAATAGTCATAAGTTTAAGACGGTCTTTGGAATGCGCAAACCAGCTCCTC
CTATTCTACCCAAGGACAAGACCTTCTTTGACTCACTAGATTCGGATGGTACTTGCCCTCCATGGTTGTCTGAAGAAGAT
ATTTCCTACTATGCAGACAAATTTGAGAAGACAGGGTTTACAGGAGGGCTTAACTACTACAGATGCATGGACTTGTATGT
CACCTACGGCCCATTCTCACTGTCTTGGTTTTACAATTTACTGCTTTATTTACTAATGTTAGCCAGGAAAGTTACTTCAT
TTCAATTGGTTACTGATGATATACTCTGTACTGCGTAACTTTATGCTTTCGAGTGATCAGATGAGGGGAATTGCATCCTA
AATGCTAGTTGTCGTAACCTACAAAGACTAGGAACCTAGTGGCAAAATGTACAGAAACATGCTCTTTCTTAGCAATTTTA
AATTG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------ATATATATACGTATGTCTG-AACTACATATCTGATTGCGCCAACT
TCAGTTCATAAGTTTTATGGGTGAAGGCATTTTACCAGAGTTAACGCAGGCGTTAGATCTGGCTCAACTTACTTTCGTGT
TCATGCAGGAATTGGGAGCTTTCTGCACCATGGACTGGAGCTCCAATAAAAGTAGCAACAAAATTCATCGTTGGGGACCT
TGACGTTACATACAATGTACCGGGGGTGAAAGACTACATTCACAAGGGTGGCTTGAAAGCGAGCGTGCCGAATCTGGAGG
ATGTGGTTGTCATGGAGGGAGTGAGTCACTTCTGCAACCAGGAGAAGCCTAATGAGGTTTCAGATTACATCTGCGAGTTC
TTCAGCAAGTTCTGATTATATCAAGAGAGTCTCGGCGAACCTACCTGTTTCGGTTCTGTTTATGTACTTATAAGTTGTTG
ATTACACATGCCATGATACTGAAATTTCTCTAAATAAAACCATGGTCTGATTGTCACAGAAGAATTACTGTGAACTTTCA
TGTCCTCCTGTTTCTATGCAGAGGGGCAAAGTGTAACCTGTGGGCAGCAGTGAAATCTTAGCAGCTGAAACCGGTAGAAA
AAA-CCACCAGATTACCATTTCTTCTTTATTCGGG-CTGTCTTTTGGACCTCTTTTTTTCTTTTGGTTAGGTTCATACTG
AGGTAGTGGACAAACATATGGGAAGAATATGGGCAGGGGCAAATTTCCTATTATTGTGGGCAAATAGAATTGCTTGACTT
GTTAAATTAAGTTCAACTTCAAACTTACAAAAAAATATTGCAAAAATAACGTAAACTCTTCCATTGAAGGCTTGTGTTTT
AC-TTTAGGCTAGTTGAAGCAGTTGTGTGAGATGTTCTGAAACACCTCTGCCTCTAGGGCAGCTGAGTTTTGCCGTGAAA
ATCTTGAAAGGGATGTACGGCTCCGCTGCCTCTGGAACTCAACCGTTCCAATGCTGACCTGCAGAGGGAAATTTGTTAGT
TTCTGGCGTAGCTAGGTGTATCATGAGTAGTTGATGAACATGCTGAACCGCGAGTAACTTCACATTGTAGAATAGCGCCT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TTTTTTTTAACACTACGATCAACAAACTGGGAAGCAGATTGTCGATGATCTTGGCGTTGTTCACTGGTTTTCTTT--TTT
TTTCCTTTTGAAGTTTATTTTATTTTTCCTTTGTTTAGAAATTTCAAAAAATGTTCATGTTTTCA--
>chr3A_733
ACG-------AC--------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------GACGACGAAAGAGAGCCGCGACACCCGGTCCAGTCCA--------AATGTCCAATCCAAGTA
TCCAAGTCCAAGGTGTGCGAAATTTCGGCAAGCTGCCAAAAACTCCTCTTGCCAGCGCCCGTCCGGCCGCCCC-CACAAG
CCACGAAATCCTCGCCCGTTTAGCCACACAGCCAGCGGCCGGCGACGCACCCGAAGCAGCGCGCGCAGGCTACC-CCAAA
ACCACCGGATAGTCAATCCCTCGGCGGGCCACGAGCGCGAGA-GAAGCAGCGGCAGCGATGGAGCCGGAGGGGGTGCGGC
ACCGGATGGTGGAGGTGGCCAAGGGGGTGCGGCTGCACGTGGCGGAGGTGGGGCCCGAGAACGGTCCCGTGGTGCTGCTC
GTGCACGGCTTCCCGGACCTCTGGTACGGCTGGCGCCACCAGATGGTCGCCCTGGCGGCCCGGGGCTTCCGCGCCGTCGC
GCCCGACATGCGCGGCTACGGCGACTCCGACGTCCCGCCCTCCGCGGGCTCCTACTCCATCTTCCACCTCGTCGGCGACC
TCGTCGCCCTCATCGCCGACCTCGCTCAGCCCCAGGTCTTAGCATCGAACCCCTTCGCCCTTCGAGATCCCCCACGCCGG
CCATGCTCCTTGCTAAGATTGCTGTTCGATTCTCGGGTTCGCGTGGCAGGTGTTCGTGGTTGGGCACGACTGGGGCGCAC
TCGTGGCATGGCAGCTCTGCCTGCTCCGGCCGGACCTTGTGCGGGCGCTCGTTAACCTCAGCGTGGCCTACCACCCGCGC
AGCTCCGAGGGGAGCCCGCTCCAGGTCGTCAGGGCCTTGTGCGGGGAAGACCACTACATGTGCCGTTTCCAGGTGGAGCC
CTTCATCTCCTTTCTGTCCTGCTTATAGCAGACAGAATCAATGTCATTATGAGTTGTGTTCATCTGTCCTGACGACTTTA
TTGGATAGGGGTCTGTTTACTGGTCGTGGCAAAACAATTT------------GTTGTTGGCATAATTTCGTATGTTAGAC
GATTGTCTTCATGGTGGGCTGTTCGTGATGCTTACCAAGGGATCGAACCAAACTAGATTATTCGAACTTCGGAATTCCAG
ATAGATAACAATGGAGAAATGGTAATAAACAAGAAATATCGGTATATTGGATTGGAGGTTGAGTAGTGT-----------
--------------------------------------TTTTCACTAAGGAAATTGAGTTATTGGTTCAATTGAAATTGG
ATACTTCGTATTGTCTTTTTTGAAGCTGGTAACTTAA-CATTATCGCATTCCTGAGATACATAGTAGGTAAAACCATTGT
TTCTTGAAATATGCCAAATTTATTTGTTGAAGCTTTATTTGCTATGCAATCACACCTATGTCCTTATCAGGTTAGGAACC
CGAGTACCTTAAGTACTATAAATCTTCAGTAACAAACTTTAGTTCTTATTGACATTGTGCTTTTGTTGAAACCCAAAAAT
TACAATATCGCATTTTCAAGATATGGAGTGTGCAAGGCTCCAAGTAAAAGCATTTTCTTGAAAGACACCATGCTTTGCAA
ACAACAACATGGATCTATATCTTTACTGTTATAAAGATTTCACTCGGTGATGGCGGTCTGCTCACTTTCAGGCCACATCA
CATGTTTGACATGACAAATGCCTGATATGTGAGCAGATGTAGATGATTTGATCTTGTTTTAATCCATTTTGATCTTTAGC
AACACAAGGAATTGAACGTGTATCCGTAAGTATAGGGGAAAACATCTCTGTAACAAGCACAAAAAAAAATTCAGGGAACA
CACAAC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>chr3A_2489
AACAA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--CAACATCCCTTTTGCAGAGCTGTAAATAACAATACGGAGTATTACAGTGATTACAGTTAGCCTTAAAAACATTCAACT
GACTGACAGATTATAATTGTCTATCTTGTCATCGCCTGGATTTCTTTTTCGAGTATAGGACTTCAACAATTCCTACCTGC
AGACTCAGGTTTAAAAGTATCTCCTGATACAGTACTAGATATTGCTGTTTAATTGCTTATTCTTAGATATAGTTTTCCTC
TGCACCAACATCGCTTCAAATTTGGTTTGTCGGAAACAGTCGTTCATATGCATTACTGAATTATGCATGCAGGAGCCTGG
AGTCGCTGAAGCTGAATTTGCTCTATACGACAATAGTCATAAGTTTAAGACGGTCTTTGGAATGCGCAAACCAGCTCCTC
CTATTCTACCCAAGGACAAGACCTTCTTTGACTCACTAGATTCGGATGGTACTTGCCCTCCATGGTTGTCTGAAGAAGAT
ATTTCCTACTATGCAGACAAATTTGAGAAGACAGGGTTTACAGGAGGGCTTAACTACTACAGATGCATGGACTTGTATGT
CACCTACGGCCCATTCTCACTGTCTTGGCTTTACAATTTAGTGCTTTATTTACTAATGTTAGCCAGGAAAGTTACTTCAT
TTCAATTGGTTACTGATGATATACTCTGTACTGCATAACTTTATGCTTTCGAGTTATCAGATGAGGGGAATTGCATCCTA
AATGCTAGTTGTCGTAACCTACAAAGACTAGGAACCTGGTGGCAAAATGTACAGAAACATGCTCTTTCTTAGCAATTTTA
TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTCTGTGTGTGTGCGTGCGTGCGTGTG
CGTGTGTGCGTGTGTATGGATGTATGTATGTATGTATGTATGTGCATGCATGTCACGTATATGTACGTACGTACGTATAT
GTGTGTATGTCACGTAGGTACGTATGTACGTATGTATGTATGTACGTATGTATGTAACTACATATCTGATTGTGCCAACT
TCAGTTCATAAGTTTTATGGGTGAAGGCATTTTGCCAGAGTTAACGCAGGCGTTAGATCTGGCTCAACTTACTTTCGTGT
TCATGCAGGAATTGGGAGCTTTCTGCACCATGGACTGGAGCTCCAATAAAAATAGCAACAAAATTCATCGTTGGGGACCT
TGACGTTACATACAGTGTACCGGGGGTGAAAGACTACATTCACAAGGGTGGCTTGAAAGCGAGCGTGCCGAATCTGGAGG
ATGTGGTTGTTATGGAGGGAGTGAGTCACTTCTGCAACCAGGAGAAGCCTAATGAGGTTTCAGATTACATCTGCGAGTTC
TTCAGCAAGTTCTGAT--TATCAAGAGAGTCTCGGCGAACCGACTTGTTTTGGTGCTGTTTATGTACTTATAAGTTGTCG
ATTACACATGCCATGATACTGAATTTTCTCTAAATAAAACCATGGTCTGATTGTCACAGAAGAATTTCTGTGAACTCTCA
TGTCCTCCTGTTTCTATGCAGAGGG---AAGTGTAACCTGTGGGCAGCAGTGAAATCTTAGCAGCTGAAACCGGTAGAAA
AAA-CCACCAGATTACCGTTTCTTCTTTATTCGGGTCTGTCTTTTGGACCTC-TTTTTTCTTTTGGTTAGGTTCATACTG
AGGTAGTGGACAAACATATGGGAAGAATATGGGCAGGGTGAAGTTTCCTATTATTGTGGGCAAATAGAATTGCTTGACTT
GCTAAATTAAGTTCAACTTCAAACTTACAACAAAATATTGCAAAAATAACGTAAACTCTTCCATTGAAGGCTTGTGTTTT
AC-TTTAGGCTTGTTGAAGCAGTTGTGTGAGATGTTCTGAAACACCTCTGCCTCTAGGGCAGCTGAGTTTTGCCGTGAAA
ATCTTGAAAGGGATGTACGGCTCCGCTGCCTCTGGAACTCAACCGTTCCAATGCTGACCTGCAGAGGGAAATTTGTTAGT
TTCTGGTGTAGCTAGGTGTATCATGAGTAGTTGATGAACATGCTGAACTGCCAGTAACTTCACATTGTACAATA------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>SNPs
S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS-----------------------S-----------S-SSSSSSSS-----------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
---------------------------S--------------S-------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
-----------S------------S-------------------------------S----------S---S------S-
---------------------------S----------------------------------------------------
----------------------------S--------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-----------------------------S-------------S----------------------------S------
--------------------------------------------S-----------------------------------
---------------------S----------------------------------------------------------
------------------------------------------------------------------------------S-
------S------------------------------S------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
----S----S-----------------------------------------------------------------S----
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
-------------------------------------------------S--------------S---S-----------
--------------------------------------------------------------------------------
---------------S------------------------S--S------------------------------------
---------------------------------------------------------------------S----------
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--------S-------------------------S-SS-SSS--------------S-----SSSSS-SSSSSSSSSSSS
S-SSSSSSSSSSSS-SS---------------------------------------------------------------
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-------------------------SS-----S---------------S--S----------------------S-----
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------------------------SS-------------------------------------------------SS---
----S----S-----------SS------------------------------------------SS
>forward_286
--------------------------------------------------------------------------------
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--------------------------ATGTCTCCCTTCCCTCCTCC----------------------------------
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>reverse_2316
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------CGCAA
ACAACAACACGGATCT----------------------------------------------------------------
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>forward_587
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-------CGACGACCCTTCTTGTTCCA-----------------------------------------------------
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>reverse_2549
--------------------------------------------------------------------------------
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--------------------------------------------------------------------TTCAGGGAACAC
ACAACATCC-----------------------------------------------------------------------
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>forward_639
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-----------------------------------------------------------GCTCTAATGGTGTTGGGGCT-
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>reverse_2656
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---------------GTTGTCTATCTTGTCATCGCCTG------------------------------------------
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>forward_776
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------------------------------------CGACATCCGGTCCAGTCAAA------------------------
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>reverse_2790
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---------------------------------------------------------------------CAGTTTTCGTC
TGCACCAACA----------------------------------------------------------------------
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>forward_1711
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-----------TCTGTTTACTGGTCGTGGCG-------------------------------------------------
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>reverse_3633
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--------------------------------CACCAGAGTTAACGCATGCA----------------------------
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>forward_1725
--------------------------------------------------------------------------------
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------------------------CGTGGCGAAACAATTGAACCA-----------------------------------
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>reverse_4106
--------------------------------------------------------------------------------
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-------------------------TCAAAGTGTAACCTGTGGGCA----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
