>input_sequence_31576
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-ATGCTCCCGTGGGCGACGGCGGCGGAGGCCGAGGCGGCGCTGGGGCGCGCCATGACGGCCGCGGAGGCGCTGTGGTTCC
GGTGGACCGCGGAGACGTCCGACTACTACCTCTACTGCCTCAACATCCTCTTCCTCCTCGTCGTCTTCACGCTCGCGCCG
CTCCCCGTCGCGCTCCTCGAGCTCCGCGCGCCGCGGGCCGTCGGGCCGTACAAGCTGCAGCCCCGGGTGCGGCTCTCGCG
TGCCGAGTTCCTCAAGTGCTACGGGGACGTCATGCGCATCTTCTTCCTCGTCATCGGCCCGCTCCAGCTCGTCTCCTACC
CCGCCGTCAAGGTCCGCT-----------TCTCCCC-CGACCCTCG---TTTTTCTTTTTCTCTTGGTGGATGATGAATC
TGCGCAATGCGGTCCGAGATTTGGGCTTCCATGGAAAAAGATCGAATGTTACAGCGCTGAAAGGCATGGAATTCAGATTC
GCA----TGCGGTTGTCCTTTTTGATCTGTATGTTCGGAGGA---GTACTAGTTTTGGGGAATTTATGGCCTGGGCGCTG
CTCCAAAACCCTGTACAAGTGATCCACATTTCAAAATTTCCTCTA-TTTTCTCCACGCGGTCTTGGCAAAAACAAAAGAC
TGGTGTAGCACTTACGATGAA-----ACAATAATAAATTTATCCTCTTTGATTGATTGATCACTGCAGATGGTGGGAATC
CACACCGGACTGCCGCTGCCGTCTCTGGGGGAGATGGCGGCACAGCTGCTGGTCTACTTCCTGGTTGAGGACTACCTCAA
CTACTGGATCCACCGGCTGCTGCACGGTGAGTGGGGCTATGAGAAGATCCACCGGATCCACCATGAGTACACCGCGCCCA
TTGGCTTTGCAGCGCCATACGCACACTGGGCAGAGGTGCTCATACTTGGCATCCCCTCCTTCGCTGGGCCGGCCATTGCA
CCAGGCCACATGATAACATTCTGGCTCTGGATTATACTTCGTCAGATGGAAGCCATTGACACACACAGCGGGTAAGGAAT
TTCGGTAGTTTCTCCCTTGAGATTATTTCCAAGAATGTGCAGCCACTAACCCCTCTGTAATTAAATAGCTAGCTCCCACT
GTATCTGACGATGTATGCAATGATAGTGATCTAAATGCTCTTATATTAGTTTACGGAGGGAGTAGTATTTGGCAAAGGTT
ATAATGTATTTTGCTGCTAGTGACAGATGGATTGCAATG---------------------------TT------------
------------------------------------------AGCTGCATGGGTCTACGTCTGAATTAGTTGAGTTATTG
ATTAAAATAAGTCGTAGCTGGCTGCTTACTTAATGTGAGCCAAACTATTACTATTTCATCTAACTTGAATAAAGT---AC
TGAATTTGACTATGTATTCTGATAAATCGAGAAGTTTTTATTTCGTTATATGATCCAAAAAGATAAAAAGAAAGGTTTAA
CAAGCCATGAGAAAATAAAGTAAAGTAACCATACGTTCTTTTTGCATAACGTGTACTCCCTCCGTCCGAAAAAACTTGTC
CCAAGCTTGTTCCTCAAATGGATGTATCTAGTACTAACTTGGTGCTAGATACATCCATTTGAGGGACATGCTTTTTCGGA
CGGAGGGAGTATATGCCAAGCCATATAGAAACATGGGAGGTTTTCTTAGGAATACAGCTCTTTGTTCATCTATAATTATA
TGAATGGAAGAACCTGGTAATGAAGAAGCTAAAGCAATTATCTCTTTTGTAGGACAAAATTAACAAACAAGCTCTACATT
TATTCGGTTTTTTCCCCAGCTGTGTTTCAATTCATGTGACCTGATTATTTTGGCTAAAGTATCTTATGTTTCTCAATTAT
AATTTCACTCTGCTATG-AAAAAGATATAACCTACAAATCTTGAAGAAATAATAATATGTATGAACAGCTAAGCTACAAA
ATGCCGCATCTAATCCAACTTTTTGGAGATGAGCCTTGTTTTATTTTGGTTTGTTGCTATGCCCAGTTATACTGTCCATG
ACTACTCCACAACAATATTTCTGAAC-TTTATCTTTTCATTTTGCAGTTTTGATTTCCCATTCAGCCTGACAAAGTATAT
TCCATTCTATGGAGGAGCAGAATACCATGATTATCATCACTACGTTGGAGGCCAAAGCCAGAGCAATTTTGCTTCCGTTT
TCACGTACTGTGATTACCTATATGGGACCGACAGAGTAAGTTTTCCCCTTCATTGCACAAAGGCACTATTCCAAACCTCA
GGAAGCGCAAGATTTCTAATTTGAGTATATTGTTCTTTCAGGGTTACAGATTCCACAAGGCTTACTTAGCAAAGGTAGTT
TGTTTTAACTGTTTATATCTTCT---GTCGTTACTTGTACTTTACCTAAGAAATAGTATCGTACATTATTTTT--CAGTT
TGCAAAACTGCCATCTGCGAATTGGCTGTTAAGGTG----TATATGTGGAGCTAATTTTATTGACTTTTCTTGTCCCCCC
TGCATGAAATAGTTGAAGGATCTGGCGCCAAGCGACGGCGAGAAAGAAGGTGCCGACGGATTCGCTTACGCAAAGTTGGA
TTAG----------------------------------------------------------------------------
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>chr1D_1_TraesCS1D01G208900
TGACACTCGTGGTAAGCAATCCAAACTTGATGAGAGAAAAATAACTTCAATAACTAACTCAGAATTCATTAAAAAACACT
GAAAATTGTGTATTTATTTATATACATCTTCACATTTTTTAAAAATAGACAAAAAATATAATTTAAATTGTAGACAGCTA
GTGTAAACTCAATACAAATTGTTTTGTATTTTTGAAGAGAGTAGCATGACACCCCTGGAACCCCACTAAATTCGCTTCTA
CCTAATTTTCTTTTGGAGCCCAAGGATTTTAT------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------AGTCGCCTCTATCAAGTTTAGCAAAGCAGGATA
AGCCCATGGATTCTCTTTCTTATTCATAAAAATGAAAAGGTAGAACTCCTGCCGATTGCCAGAGAAAGGAACTTAAAGCT
CAGCTCACGTCTAATCTCGGGATCAATCAACTGGCTCAAAGCCACCCGCAAGCTAAAAACTGTCCATAGTAATTTTTTTC
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TTTTCTTTTGAAAGATCCAGCAAATTTCTGGCATTTCATATATTAAGCAGAAAAAA
AAACAGTCCATTGTATCCAAAGTCCAGATCATGCATCTCATATGGGTCCAAAAGGACAACCACAGGGGCTCCATGTGGCA
CGTGAGATCCAACTTAGAAAAATCACCAGTACCGAAAAGACCTGCCGCCTGCCGGCCCATCGCGCCAACCCCTCGCTGAC
AACCAAAAGCCCACGCCGACCCCACACGTCAGTGAACCGTCCAGCCCGTCGCAAAAGGCGAGCACGACGTCTCTCGGGCT
CACGGCCACTCGCCGGCCAGCGCCAGGGTAACCGAACCGCTCTGGAAACCCGGGGGAGGAGCGGCAAAACATACGGCGCA
GCCCCCCGCAACTA-CACAGAAATTACGGACGCGTCCCCGGGAGAGTGGGAGGAGAAGTGGCGGAGGGTCCGAGGAGCGA
GACTGGCCAGTGGTC--TCTCTCAGTCTGTTTTTGCGGGCGGGTCCTTGTGTCTGTCCGTCCGTCCGTCCGGCCGGACGA
GATGCTCCCGTGGGCGACGGCGGCGGAGGCCGAGGCGGCGCTGGGGCGCGCCATGACGGCCGCGGAGGCGCTGTGGTTCC
GGTGGACCGCGGAGACGTCCGACTACTACCTCTACTGCCTCAACATCCTCTTCCTCCTCGTCGTCTTCACGCTCGCGCCG
CTCCCCGTCGCGCTCCTCGAGCTCCGCGCGCCGCGGGCCGTCGGGCCGTACAAGCTGCAGCCCCGGGTGCGGCTCTCGCG
TGCCGAGTTCCTCAAGTGCTACGGGGACGTCATGCGCATCTTCTTCCTCGTCATCGGCCCGCTCCAGCTCGTCTCCTACC
CCGCCGTCAAGGTCCGCT-----------TCTCCCC-CGACCCTCG---TTTTTCTTTTTCTCTTGGTGGATGATGAATC
TGCGCAATGCGGTCCGAGATTTGGGCTTCCATGGAAAAAGATCGAATGTTACAGCGCTGAAAGGCATGGAATTCAGATTC
GCA----TGCGGTTGTCCTTTTTGATCTGTATGTTCGGAGGA---GTACTAGTTTTGGGGAATTTATGGCCTGGGCGCTG
CTCCAAAACCCTGTACAAGTGATCCACATTTCAAAATTTCCTCTA-TTTTCTCCACGCGGTCTTGGCAAAAACAAAAGAC
TGGTGTAGCACTTACGATGAA-----ACAATAATAAATTTATCCTCTTTGATTGATTGATCACTGCAGATGGTGGGAATC
CACACCGGACTGCCGCTGCCGTCTCTGGGGGAGATGGCGGCACAGCTGCTGGTCTACTTCCTGGTTGAGGACTACCTCAA
CTACTGGATCCACCGGCTGCTGCACGGTGAGTGGGGCTATGAGAAGATCCACCGGATCCACCATGAGTACACCGCGCCCA
TTGGCTTTGCAGCGCCATACGCACACTGGGCAGAGGTGCTCATACTTGGCATCCCCTCCTTCGCTGGGCCGGCCATTGCA
CCAGGCCACATGATAACATTCTGGCTCTGGATTATACTTCGTCAGATGGAAGCCATTGACACACACAGCGGGTAAGGAAT
TTCGGTAGTTTCTCCCTTGAGATTATTTCCAAGAATGTGCAGCCACTAACCCCTCTGTAATTAAATAGCTAGCTCCCACT
GTATCTGACGATGTATGCAATGATAGTGATCTAAATGCTCTTATATTAGTTTACGGAGGGAGTAGTATTTGGCAAAGGTT
ATAATGTATTTTGCTGCTAGTGACAGATGGATTGCAATG---------------------------TT------------
------------------------------------------AGCTGCATGGGTCTACGTCTGAATTAGTTGAGTTATTG
ATTAAAATAAGTCGTAGCTGGCTGCTTACTTAATGTGAGCCAAACTATTACTATTTCATCTAACTTGAATAAAGT---AC
TGAATTTGACTATGTATTCTGATAAATCGAGAAGTTTTTATTTCGTTATATGATCCAAAAAGATAAAAAGAAAGGTTTAA
CAAGCCATGAGAAAATAAAGTAAAGTAACCATACGTTCTTTTTGCATAACGTGTACTCCCTCCGTCCGAAAAAACTTGTC
CCAAGCTTGTTCCTCAAATGGATGTATCTAGTACTAACTTGGTGCTAGATACATCCATTTGAGGGACATGCTTTTTCGGA
CGGAGGGAGTATATGCCAAGCCATATAGAAACATGGGAGGTTTTCTTAGGAATACAGCTCTTTGTTCATCTATAATTATA
TGAATGGAAGAACCTGGTAATGAAGAAGCTAAAGCAATTATCTCTTTTGTAGGACAAAATTAACAAACAAGCTCTACATT
TATTCGGTTTTTTCCCCAGCTGTGTTTCAATTCATGTGACCTGATTATTTTGGCTAAAGTATCTTATGTTTCTCAATTAT
AATTTCACTCTGCTATG-AAAAAGATATAACCTACAAATCTTGAAGAAATAATAATATGTATGAACAGCTAAGCTACAAA
ATGCCGCATCTAATCCAACTTTTTGGAGATGAGCCTTGTTTTATTTTGGTTTGTTGCTATGCCCAGTTATACTGTCCATG
ACTACTCCACAACAATATTTCTGAAC-TTTATCTTTTCATTTTGCAGTTTTGATTTCCCATTCAGCCTGACAAAGTATAT
TCCATTCTATGGAGGAGCAGAATACCATGATTATCATCACTACGTTGGAGGCCAAAGCCAGAGCAATTTTGCTTCCGTTT
TCACGTACTGTGATTACCTATATGGGACCGACAGAGTAAGTTTTCCCCTTCATTGCACAAAGGCACTATTCCAAACCTCA
GGAAGCGCAAGATTTCTAATTTGAGTATATTGTTCTTTCAGGGTTACAGATTCCACAAGGCTTACTTAGCAAAGGTAGTT
TGTTTTAACTGTTTATATCTTCT---GTCGTTACTTGTACTTTACCTAAGAAATAGTATCGTACATTATTTTT--CAGTT
TGCAAAACTGCCATCTGCGAATTGGCTGTTAAGGTG----TATATGTGGAGCTAATTTTATTGACTTTTCTTGTCCCCCC
TGCATGAAATAGTTGAAGGATCTGGCGCCAAGCGACGGCGAGAAAGAAGGTGCCGACGGATTCGCTTACGCAAAGTTGGA
TTAGATGGTCTTATAGAGTGCATCCTCAGCGCCTCCCTGATGATCTTGTTCAGTTATGGCATTGTGAAAATAGTTGTGTT
GAGCTGGGCATGTGTAGTTCTTGTTATGTGAATTTTTGTGTTTCTTGCAAGTGTGGTGAACATCCCTGAACTTGTTACGC
TGACCAATAATATTCCCCAGATAACCTTTAAATGAGCTTGCTATCTGC-TATATCTCCGTGGATTGGCTTTCAATAAGAA
AAGTATGATTAAGCTTGTGCGCTTGATGGTCATACTGAATACTTATCATCTGTCTATATGAAGGAAAAAAATGTACATCC
ATTTCAGTTCACACGCAAACTCCAGTTATAAGATTGTACAGTATCAATTGCAACGTTTTAAACTTTGGGAGGATAGCACA
ATAGGACATACTACCAAATTTGCAACAACTGCCTTAAGAAAATGTGAAATAATAATACTTACCACACAGTTTAGACCATG
AAATTTGTAAGCATTATTATAA--C--GCTCCATTCATATAGATCCCCTCTCAAGAGAATGGTCCAGTTAAAATACTCCC
TCCATCCCATAATATAAGAACGTTTCTGGAGAGTGGCGATAGTACACACGAGCTCGTGTGCTCCTGGTAAACGGACCAAT
GGTACAGCGAGCACATGCGGATGACATTAATGAATCGTGAAAATACGGTGTGGGTTTAAAAGTGTAGGTAGTTAATATAG
GGGCATTGGTCGGTACAGCGGGGTTACGGCGCACGGCGTTAAGTGACGGGAATTACGAATCGTTCCATTGGGACAGGATG
GTTGGACTGCATGTACCATCCGATTTGTACAGCTCTCTCCCACCCCCGCCGCCAACAAACACAACACACACACACCAAAA
GACGCACGCGCGGACGCATCACCGGGGCCGTCTTGCTTGCAGTTGCTCGCGCGCACCTGCCGGCCGCCGCTGGCCGGCGA
GGCCGCCTCACCCGCGCAAAAGCGGAAGAGAGCGGAGCAGGAGGAGCAT
>chr1B_1
TGACATTCGTGGTAAGCAATCCAAACTTGATGAAAAAAGGTTAGCATCAATAACTAAGTCAAAATTCATG--AAAACACT
AAAAATTGTGCATTT-TTTACATACATCTTCACATTTTAACAATTAGACCAAAACATAGACTTTAAATTGTAGACAACTA
GTGTAAACTCAATATAAATTGTTTTGTATTTTTGAAGAGAGTAGCGTGACACCCCTTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTGGAGTTGCCTCTATCTAGTTTAGCAAAGCAGGATA
AGCCCATG-------------------AAAAATGAAAAGGCAGAACTCCTGCAAAGAAAGGACTTT---------AAGCT
CAGCTCACGTCTAATCTCGGGATCAATCAACTGTCTCAAAGCCACCCGCAAACTAAAAACAACCCATATTATTTTTATAG
GTCTGTCTTGGGCACATCTGTGCTATAGTTATTGCACATCTAAGTAACCCAGTCAATCTAGAAAGAAAAGAAAAAAACAA
AAGAAAATGCTTGCACGAATCTTAGCATAAAATCAATTACATAGGACTTAGATATGCAATACTTAGAGTACATCTAGATG
TGCTTTAGCAAAATTATATTTTTATTTTCTTTTGAAAGATCCAGCAAATTTCTGGCATTTCATATATTAAGCAGGAAAAA
AAACAGTTCATAGTATC-AAAGTCCAGATCATGCATCTCATATGGGTCCAAAAGGACAGCCACAGGGGCTCCATGTGGCA
CGTGAGATCCAACTTAGAAAAATCACCCGTACCGGACAAAG-----ACCTGCCGGCCCATCGCGCCAACGCCTCGCTGAC
AACCAAAAGCCCACGCCGGCCCCACACGTCAGTG--CCATCCAGCCCACCGCAAAAGGCGAGCACGACG--TCTCGGGCT
CACGGCCACTCGCCGGCCAGCGCCAGTGTCACCGAACCGCTCTGGAAACCCGGGGCAGGAGCGGCAAAACATACGGCGAA
GCACCCCGCAACTA-CACAGAAATTACGGACGAGTCCCCGGGAGAGTGGGAGTAGTAGTAGCGGAGGGTCCGAGGAGCGA
GATTGGCCAGTGGTC--TCTCT----CTGTTTTTGCGGGCGGGTCCTCGTGTCTGTCTGCCCGTCCGGC---CCGGACGA
GATGCTCCCGTGGGCGACGGCGGCGGAGGCCGAGGCGGCGCTGGGCCGCGCCATGACGGCCGCGGAGGCGCTGTGGTTCC
GGTGCACCGCGGAGACGTCCGACTACTACCTCTATTGCCTCAACATCCTCTTCCTCCTCGTCGTCTTCACGCTCGCGCCG
CTCCCCGTCGCGCTCCTCGAGCTCCGCGCGCCGCGGGCCGTCGGGCCGTACAAGCTGCAGCCCCGGGTGCGCCTCTCGCG
TGCCGAGTTCCTCAAGTGCTACGGGGACGTCATGCGCATCTTCTTCCTCGTCATCGGCCCGCTACAGCTCGTCTCCTACC
CCGCCGTCAAGGTCCGCTCCGCCGGCTTCTCTCTCT-CGACCCCCGTTTTTTTTCTCGCTCTCTTGGTGGATGATGAATC
TAGGCAATGCGGTCGGAGATTTGGGGCTCCATGGAAAA-GATCGGATGTTCTAGCGCTTACAGGCATAGAATTTACTAGA
TTCCCATTGGGGTTGTCC-TTTTGATCTGTATGTTCGGAGGTACTGTACTAGATTTGTGGAATTTATGGCGTGGGCTCTG
CCCCAAAACCCTGTACAAGTGATCAACATTTCAAAGTTTCCTCTA-TTTTCTCCACGCAGTCTTGCCAAAAGAAAGTACT
AC----------------------------TAATAAATTTATCCTGTTTGATTGC----TCACTGTAGATGGTGGGAATC
CACACCGGACTGCCATTGCCGTCTCTGGGGGAGATGGCCGCACAGCTGCTGGTCTACTTCCTGGTTGAGGACTACCTCAA
CTACTGGATCCATCGGCTGCTGCACGGTGAGTGGGGCTATGAGAAGATCCACCGGATCCACCATGAGTACACCGCGCCCA
TTGGCTTTGCCGCGCCATACGCACACTGGGCAGAGGTTCTCATACTCGGCATCCCCTCCTTCGCTGGGCCAGCCATTGCA
CCAGGCCACATGATAACATTCTGGCTCTGGATTATACTTCGTCAGATGGAAGCCATTGATACACACAGCGGGTAAGGAGT
TTCAGTACTTTCTCTCTTGAGATTATTTCTATGCTTGTGCAGCCACTAACCCCTCTATAACTAAATAGCTAGCTCCCGGT
GTATGTGACGATGTATGCAATGAT-------------------------------------GTAGTATTTGGCAAAGGTT
ATA-----TTTTGCTGCTAGTGATGGATGCATTCATAACAAATGGAGTTGCTGGATGATTGCGACATT------------
------------------------------------------AGCTGCATGGGTCTACGTCTGAATTAGTTGAGTTATTG
ATT--AAAAAGTTGTAGCTGGCTGCTTAATA----TGAGCCAAACTATTACTATTTCATCTAACTTGAATAACCAAGGAC
TGAATTTGACTATGGATTCTAATAACTCGAGAAGTTTTTATTTGGT--TATGATCCAAAAAGACAAAAAGAAAGGTTTAA
CAAGCCATAAGAAAACAAAGTAAAGTAACCATATGTTCTGTTTGCATAACGTGTATACGCCACACGAA------------
--------------------------------------------------------------------------------
------------------------ATAGAAACATGGGAGGTTTTCTTACGAATACAGTTCTTTGTTCATCTATAATTATA
TGAATGGAAGAACCTGGTAATGAAGAAGCTAAAGCAATTATCTCTTTTGTAGGACAAAATTAACAAACAAACTCTACATT
TATTCGGGGTTTTCCCCAGCTGTGTTTCAATTCATGTGACTTGATTATTTTGACTAAAGTATCTTATGTTTCTTAATTAT
AATTTCACTCTGCTATGGAAAAAGATATAACCTACAAATCTTGAAGAAATAATAATATGTGTGAACAGCTAAGCTACAAA
ATGCCGCATCTAATCCGACTTTTAGGAGATGAGCCTTGTTTTATTTTGCTTTGTTGCTATGCTCAGTGATACTGTCCATG
ACTACTCCACAATGACATTTCTGAAGTTTTATCTTTTCATTTTGCAGTTTTGATTTCCCATTCAGCCTGACAAAGTATAT
TCCATTCTATGGAGGAGCAGAATACCATGATTATCATCACTACGTTGGAGGCCAAAGCCAGAGCAATTTTGCTTCCGTTT
TCACGTACTGTGATTACCTATATGGGACCGACAGAGTAAGTTTTCCCCTTCATTGCACAAAGGCACTATTCAAAATCTCA
GCAAGCGCAAGATTTCTAATTTGAGTATATTGTTCTTTCAGGGTTACAGATTCCACAAAGCTTACTTAGCAAAGGTAGTT
TGTTTTAACTGTTTATATCTTCT---GTCGTTACTTGTACTTTACCTAAGAAATAGTATCGTGCATTTTTTTTTGCAGTT
TGCAAAACTGCCATCTGCTAATTGGCTGTTAAGGTGACTATATATGTGGAGCTAATTTTATTGACTTTTCTTGTCCCCCC
TGCATGAAATAGTTGAAGGATCTGGCGCCAAGCGACGGCGAGA---AAGGTGCCGACGGATTCGCTTACGCGAAGTTGGA
TTAGATGGTCTTATAGAGTGCATCCTCAGCGCCTCCCTGATGATCTTGTTCAGTTATGGCATTGTGAAAATAGTTGTGTT
GAGCTGGGCATGTGTAGTTCTTGTTCTGTTATTTTTTTT-----TTGCAAGTGTGGTGAACATCCCTGAACTTGTTACGC
TGACCAATAATATTTCCCAGATAACCTTCAAGCGAGCTTGCTATCTACGTATATGTCTGTGGATTGGCTTTCAATA-GAA
GAGTATGATTAAGCTTGTGCGCTTGATGGTCATACTGAATATTTATCATCTGTCTAT--GAAGAAAAAATATGTACATCC
ATTTCACTTCACACGCAAGCTCCAGTTATAAGATTGTACAGTATTAATAAGTGTCTCAATTTTGTATTAGCTCTAGTATA
AATTTGTACTAAGCTTAAGACACTTATTTTGAGACGGAGGGAG------TAATACTGAAA---ACACAGTTTAGACCATG
AAATTTGTAAGCATTAACATAA--CGCGCTCCATTCATATAGATCCACTCTCAACAGAATGATCCAGTTAA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------
>chr1A_536
TATCA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------AAGTCCAGATCATGCATGTCATATGGGTCCAAAAGGACAGCCACAGGAGCTCCATGTGGCA
CGTGAGATCCAACTTAGAA-AATCACCAGTGCCGGACAAAG-----GCCTGCCGGCCCATCGC-----------GCTGAA
AGCCGAAAGCCCACGCCGGCCCCACACGTCAGTGAACCGTCCAGCCCGTCGCAGAAGGCGAGCACGACG--TCTCGGGCT
CACGGCCACTCGCCGGCCAGCGCCAGTGTGACCGAACCGCTCTGGAAACCCGGGGGAGGAGCGGCAAAACATACGCCGCA
GCACCCCCGCAATCCCACAGAAATTACGGACGCGTCCCCGGGCGAGTGGGAGGAGTAGTGGTGGAGGGTCCGAGGAGCGA
GACTGGCCAGTGGTCTATCTCT----CTGTTTTTGCGGGCGGGTCCTTGTGTCTGTCTCTCTGTCCGGC---CCGGACGA
GATGCTCCCGTGGGCGACGGCGGCGGAGGCCGAGGCGGCGCTGGGGCGCGCCATGACGGCCGCGGAGGCGCTCTGGTTCC
GGTGGACCGCGGAGGCGTCCGACTACTACCTCTACTGCCTCAACATCCTCTTCCTCCTCGTCGTCTTCACGCTCGCGCCG
CTCCCCGTCGCGCTCCTCGAGCTCCGCGCGCCGCGGGCCGTCGGGCCGTACAAGCTGCAGCCCCGGGTGCGGCTCTCGCG
GGCCGAGTTCATCAAGTGCTACGGCGACGTCATGCGCATCTTCTTCCTCGTCATCGGCCCGCTCCAGCTCGTCTCCTACC
CCGCCGTCAAGGTCCGCT-----------TCTCCCCCCGACCCTCG---TTTTTCCTTTTCTCTTGGCGGATGATGAATC
TGCGCAATGCGGCCGGAGATTTGGGGTTCCATGGAAAAAGATCGAATGTCACAGCGCTGACAGGCATGGAATTCAGATTC
GCA----TGCGGTTGTCA-TTTTGATCTGTATGTTCGGAGGA---GTACTAGATTTGAGGAATTTATGGCCTGGGTTCTG
CTCCAAAACCCTGTACAAGTGATCCACACTTCAAAGTTTCCCCCAGTTTTCTCCACGCAGTCTTGGCAAAAACAAAAGAC
TGTTGTTGTATCTAAGACCAAACAATACAGTAGTAAATTTATCCTATTTGATTGA----TCACTGCAGATGGTGGGAATC
CACACCGGACTGCCTCTGCCGTCTCTGGGGGAGATGGCGGCACAGCTGCTGGTCTACTTCCTGGTTGAGGACTACCTCAA
CTACTGGATCCACCGGCTGCTGCACGGTGAGTGGGGCTATGAGAAGATCCACCGGATCCACCATGAGTACACCGCGCCCA
TTGGCTTTGCCGCGCCATACGCACATTGGGCAGAGGTGCTCATACTTGGCATCCCCTCCTTCGCTGGGCCGGCCATTGCA
CCAGGCCACATGATAACATTCTGGCTCTGGATTATACTTCGTCAGATGGAAGCCATTGATACACACAGCGGGTAAGGAAT
TTCCGTAGTTTCTCTCTTGAGAGA--------------------------------------------------------
------------------------------------------------------------------------------TT
ATG-----TTTTGCTGCTAGTGATGGATGGATTTATAATAAATGGAGTTGCTGGATGATTGCGATGTTAGCTGCATGACA
CCAAATATGACTAAAATCGGTACCAATGAATATTAGTGGGGGAGCTGCATGGGTCTATGTCTGAATTAATTGAGTTATTT
CTTAAAAAAAGTCGTAGCTGGCTGCTTACTTGA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------AGGTTTTCTTAGGAATACATTTCTTTGTTCATCAACATCTATA
TGAATGGAAGAACCTGGTAATGAAGAAGCTAAAGCTATGATCTCTTTTGTAGGACAAAATTAACAAGCAAACTCTACATT
TATTCGGT-TTTTCCCCAGCTGTGTTTCAATTCATGTGACTTTATTATTTTGGCCAAAGTATCTTATGTTTCTTAATTAT
AATTTCACTCTATTGT-GAAAAAGATACAACCTACAAGTCTTGAAGAAATAGTA--ATGTGTGAACAGCTAAGTTACAAG
ATGCCACATCTAATCCATTTTTTAGGAACAG-------------------TTGTTGCTATGACCAGTGACACTGTCCATG
ACTACTCCAC-----------TGAAC-TTTATCTATTCATTTTGCAGTTTTGATTTCCCATTCAGCCTGACAAAGTATAT
TCCATTCTATGGAGGAGCAGAATACCATGATTATCATCACTACGTTGGAGGCCAAAGCCAGAGCAATTTTGCTTCCGTTT
TCACGTACTGTGATTACCTATATGGGACCGACAGAGTAAGTTTTCCCCTTCATTGCACAAAGGCACTATTCAAAATCTCA
GGAAGCGCAAGATTTCTAATTTGAGTATATTGTTCTTTCAGGGTTACAGATTCCACAAGGCTTACTTAGCAAAGGTAGTT
TGTTTTAACTGTTTATATCTTCTTCTGTCGTTACATATACTTTACCTAAGAAATAGTATCGTGCATTTTTTTTT------
--------TGCCATCTGTGAATTGGCTGTTAAGGTGACTATATATATGGAGCTAATTTTATTGACTTTTCTTGTCCC---
TGCATGAAATAGTTGAAGGATCTGGCACCAAGCGACGGCAAGAAAGAAGGTGCTGACGGATTCGCTTATGCAAAGTTGGA
TTAGATGGTCTTATAGAGTGCATCCTCAGCGCCTCCCTGATGATCTTGTTCAGTAATGGCATTGTGAAAATAGTTGTGTT
GAGCTGGACATGTGTAGTTCTTGTTATGTGATTTTTTGTGTTTCTTGCAAGTGTGGTGAACGTCCCTGAACTTGTTATGC
TGACCAATAATATTTACCAGATAACCTTTAAGC-AGCTTGCTATCTGC-TATATGTCCGTGGATTGGCTTTCAATAAGAA
AAGTATGATTAAGCTTGTGCACTTGATGGTCATACTGAATATTTATCATCTGTCTAT--GA-GGAAAAAAATGTACATCC
ATTTCAGTTCACACGCAAGCTCCAGTTATAAGATTGTACAGTATCAATTGCAACGTTTTAAACTTTGGGAGGATAGCAAA
ATAGGACATACTACCAAATTTG--ACAATTGCCTCAAGAAAATGTGAAATAATACTGAAA---ACACAGTTTAGACCATG
AAACTTGTAAGCATTAATATAAGGC--GCTCCATTCATATAGATCCACTCTCAACAGAATGATCCAGTTAAAATA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>SNPs
-----S---------------------------S-S--SSS--S-S-----------S---S-------SSS--------
S---------S----S----S-----------------SSS--SSSSSS-----S---S-S---------------S---
--------------S------------------------------S----------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S---------S-------------------
--------SSSSSSSSSSSSSSSSSSS-------------S-----------SS-SSSSSSSSSSSSSSSSSSSS-----
---------------------------------S-----------------S--------SSS-----S--S----S-SS
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
-------S---S-----S----------------------------------------S---------------------
----------------------------------S-S-S-SSSSSS-----------------------S----------
------------------S--------------------------------------------------SS---------
--------------------------S--S--------------------------------------------------
--S----------------------------------------------------S------------------------
----------------------SSSS-------------------------------S---------S-SSS--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S----------S----------------------------------S-------------------
------------------S---------------------------------S----S------------------S---
-----------------------------------S----------------------S---------------------
--S---S-S-SS--S--SS----------S---------------S---------SSSS---------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
-----------------------------------------------------------S--------------------
---S----------S--------------S-S-SS---------------------S---S----------------SS-
----S-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------
---SSSSS---------------SS--------SSS-SS-----------------------------------------
--------------------------------------------------------------------------------
-------S-----------------------S-SS-------------------------------------SSS-----
--------------S-----S----S-----------------S--SS---------------S----------------
--------S------S-----------------S-----S---------------SS-S-SS-SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS---------------------------------S----------------------
----------------------------------------------------------------------S---------
--------S-------------------------------S--------------------------------S------
------------------------------------------------------------S-------------------
-----------------------S------------------------S------------------S------------
------------SS-S----------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S---S----
--------------------------------------------------------------------------------
--------------------------------------------------------------S----S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
--------------S----------------SS---------------------S-------------------------
-----------------------------------------S---------------SS---------------------
------------------S-----------------------------------------------------------S-
-----------------------S----S-----S-------------------S-SSSSSSS-----------------
----------------S-----------------------------S-------S------S-------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_620
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TAGAACTCCTGCCGATTGCC--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_2460
--------------------------------------------------------------------------------
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-----------------------------------------------------------CACACACAGCGGGTAAGGAA-
--------------------------------------------------------------------------------
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-------------------------------------------------
>forward_630
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------GCCGATTGCCAGAGAAAGGA----------
--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_2514
--------------------------------------------------------------------------------
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---------------------------------AATGTGCAGCCACTAACCCC---------------------------
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-------------------------------------------------
>forward_1384
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----CTGGCCAGTGGTCTCTCTCA--------------------------------------------------------
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>reverse_3103
--------------------------------------------------------------------------------
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--------------------------------------------------------------GGGACATGCTTTTTCGGA
CG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>forward_3031
--------------------------------------------------------------------------------
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---------------------------------------------------TGTACTCCCTCCGTCCGAAA---------
--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_4696
--------------------------------------------------------------------------------
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-------------------------------------------------------GTGTGCTCCTGGTAAACGGA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
