>input_sequence_31550
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---ATGGCGCACTGCCTCGCCGCCGTTGCCTCCTTCTCGCCGTCCGCCGTCCGCCGGCGGCTGTCCAGCCAGGTGCCGTT
CTCGGACTGACCGCTGTCTTGTCACAGATTTGGTCATTTGCATAGTTTTAGTTTGC--GGTTCATGAGATTCCAAGGCTG
TTCCTGTGTGTTTCTTCTAAGTTCGTGGTTGATTTGGTTGGATACTTGGATGAATAGATGCTTTCTTGGTTTGATTCAAT
AGTTCACTGAGTAGCATAAACACGCTTCCTCTTTTGCTATCTTGGCGATGTTTCTCATATGCCTGTATTTTTCACACTA-
------------------------------AGTATATATTGAGCACATCATAAGATGAGCCCATGCGTTCAGTCCATATG
TTCATTTATCTAGAGAGAAATAGGTACATTTGAACTGGTATAGTATGGTTAGAAAGGCAGAAAAGCTTTAACTAGTTACC
TATGAGGTTAATTAACCTTACACTGGTGGGAAAATTTGCCTATTTACACATATTTACTAACAGATGTTGACAATTTGATT
TATTTTAGTACAAACTTCAAAGATTCCAAAATGGCTGTGTTTAACGTAACCGGCGTTGCAACTGGATCTGGATGGCTCAG
TAAGGCTTATTTTAAAATTTTCAGTTTAGTATTCTAATGTAGCCTGGTTCAGAAGATGTAAAGCTCTAGGAAGCCACCCA
ACCACATCACATGCTTCAGATCTTGCTGAATTAGATCAACAGTTCTTTACCAATGTGTTGCTCTCCACCTCGACGTTGAT
GCGTTAGCCAAATAAAAAATGCCAGCCTTTGTTTTACAATTGTATATTGCCATGTGCTTCTGGTCTAACCTGGAGTGTCC
TGCACCATTAGATTCCATAATCCATTTGGATGTATTTTTGGGTTCAACATGACTAGTTTCATGTTAGGCCTGGTATTTGA
GAAACTTGGTTGACGCATGGTTGCATCGA--------GATCCTTGTGTATTGCACCAATGTCTTGG-TTAAATTTCGAAT
ACCTAGACCGGATAATT----------TGCAGTGCTGGTTCCCAGCCAGGAAGCAGGACACTT-GGTATCTGAAAGGCAC
TAGTAGTTCATTCCTTCCTCTGGTTTGAAGGGCAGCCCAACGATTATTTCACATTCTGGGTTTGAAAGTGCTGCTCAACG
ACGATTCCACATCCTCGTTCGAAACTGCAGCTGACTGCGCAGGTGCCGACAAGCTCAAGGATCCAGAGCACTGATCACAC
TGACCCTTTTGGCCCATTTGCCAACTTTGCAAAATGAGTGAGCAGAAGTTACATCATGGCGCTCTGGCTTGAAATCTGTG
AGCTTAAGTTT---------------------------------------------------------------------
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-----------------------------------CATCATGTCGTGTTCCTTGCTTTATCTATTTTCAAGGGATAAATA
TGCATTTGGTTGATCAACTGCACTTTATTAATTTCAAATACTTCATGCATTTTTGTTGTAGTATTTTTTTTCTGCGGTCT
GTGTGTTTGAACAGTTCAGTTATGGAAACAATTTCTTGGTTCGTTGCAGGTGGCTAATGTAATTTTGAGCCGGAGCTCAG
TTTCCTTCCATAGCCAGAAGATGAGCTTTGTATCCATCAGTTCAAGACCGAGTTCGCTTCGGTTTAAGATTTGTTGTTCG
GTAGGGACACGTTTCTTCTCTGTCGCAATAGTAGAAGTTTGCCTCCATGCGTTCACAATATCTATATCTTTTTTTCCGAA
CCTCTGTACTTCTATAGGTGGCCAAGTGATTCACCCAGGCGCTTACTGGCTAGCACCATGGATGATGGGCTAGGCAGCCT
GGGTTTGATCTGGAACTCTCATCTTAATAAAACTGATGTCTAGTTCTTCCTAGACATATGTCATTTTTTAAATA-TTTTT
GTATATTAAAATGTGTGAACAAGTTTGTGATTGAAATAGGTGAGAATTGTTTGCGTTGGCAGTAATTGAAATATGTAAAT
AAGTTTAGGGTTAAAATAGGTGAGAATTGTTTACACTGGAGGAAATTCAAACATTAAATATGGGCAAATCATTTCATCAT
TTCATGGAAAATGTTCTTTCAAATTGCAGTCTAGACACCATAGGTGCAGTAAAAATCTTCCTTGGATAACGTTATCGGAT
AAAGATGGCAAATGTTTCAGCATTTTTTTTTACAACCACGCTCGATGTACTGATTTAAGGTAACGATGTTCTTTCGTTTC
TTGAGCAGGCCACGGGTGAGGCACAGGCCAAGAAAGAGACAGTCGACAAGGTTTGTATGATAGTCAAGAAGCAGCTGGCA
GTCCCTGATGGGACCCCTGTCACAGCGGAGTCGAAATTTTCTGAACTTGGTGCTGACTCACTGGATACGGTAAATCCGCA
ACTCCCCATCCCACAGAAATGGCAGTAGCCCAAAAGCAGCGCCGTTCATACGTAACACCGATTGTGTTTTGCAGGTTGAG
ATTGTGATGGGCCTCGAGGAAGAGTTCAACATCACCGTCGATGAAACAAGCGCGCAGGACATTGCAACCGTGCAGGATGC
AGCGGACCTTATCGAGAAGCTTGTGACAGAGAAGACAGCGTAA-------------------------------------
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>chr5B_1_TraesCS5B01G102000
GTCGACGCACCCGCTGCGGCGGCCTCGTCATAAATGAGCGCCGCC---ATCCTTCTCCTCCTCCCCACAGCCATCTTTGC
CTGGTCAAGCCGAAGAAGGAGCCGGCGCCGCCGCCCGTCATCGTGAAGCAGGAGCACGTCGACATGGCCGTCGACCTCGA
GACGGGCCTCAAATGGGCGCGGGACGACTACGTCTGGGAGG-AGATGGAGCGCCAGCGCCACGCCCTCAAGAAGAT-GCC
ACTCGGCGCCGCGGCCGCGAGGAGGGTGGCGTCATCGTCCTCGAGGACAGCGACGAGGAGGCGCCGCG---CACCAACCC
TGTCCGCCAAGGCGACGCAAGACAGGGCTGCAGCAAGGACTGCAGCGGC---GTGCAG---GACGACGACGACGACGG--
-CAGCGACTACACCGCCTTCTACAAGCACCTCGGTATG-CAGTAGGCCCGG----------GGCGGCTGCGTA-------
---GTTTTAGGGCATAGTTTTGGTT--TTTCTAAGTTTTTAAGTTATGTCTTTAATTTTGTACATATGTCAATGAAAACC
GTCTCAATTTCGTCCAAATTTATGTCATTTTGTGTGAAATCTAGCCATCTTTGATTTTCAAAAAGCGGCGTTTGGAGTCA
GCTTGGGACAACCACTCATGTCGATTTTATTGCCGTTTGATCCCCAGGCCACGCTATTTCAAGCCTTGGAGGCCCGAACG
GCCAGAGATGCTCTTACAAATGTGGCATGACATGTCACATGTATATCCATTCTGCACATCGAAGGCTGAGATATCCA-AC
AGATATACTTCGAATTTATTTTATTCCATTTTTCTCTCGGACTCGGAGTATAGTGCATCAGCGTTCTTTTGGGCACTTTA
TCCTAAGCCTGTCTATTTTATCTCCTATCTGCACTATAATTGCCACCATTGGTTGGTAGCAGCTCCAGAGC--AGGACCT
CCCGAGCAGCGTAGCACTCCACCTACCAGCCGGCCTCTTCCCACCGCCCCCAAATTCTACCGAGCAGCTCAGCCGGCCAA
CCCATGGCGCACTGCCTCGCCGCCGTTGCCTCCTTCTCGCCGTCCGCCGTCCGCCGGCGGCTGTCCAGCCAGGTGCCGTT
CTCGGACTGACCGCTGTCTTGTCACAGATTTGGTCATTTGCATAGTTTTAGTTTGC--GGTTCATGAGATTCCAAGGCTG
TTCCTGTGTGTTTCTTCTAAGTTCGTGGTTGATTTGGTTGGATACTTGGATGAATAGATGCTTTCTTGGTTTGATTCAAT
AGTTCACTGAGTAGCATAAACACGCTTCCTCTTTTGCTATCTTGGCGATGTTTCTCATATGCCTGTATTTTTCACACTA-
------------------------------AGTATATATTGAGCACATCATAAGATGAGCCCATGCGTTCAGTCCATATG
TTCATTTATCTAGAGAGAAATAGGTACATTTGAACTGGTATAGTATGGTTAGAAAGGCAGAAAAGCTTTAACTAGTTACC
TATGAGGTTAATTAACCTTACACTGGTGGGAAAATTTGCCTATTTACACATATTTACTAACAGATGTTGACAATTTGATT
TATTTTAGTACAAACTTCAAAGATTCCAAAATGGCTGTGTTTAACGTAACCGGCGTTGCAACTGGATCTGGATGGCTCAG
TAAGGCTTATTTTAAAATTTTCAGTTTAGTATTCTAATGTAGCCTGGTTCAGAAGATGTAAAGCTCTAGGAAGCCACCCA
ACCACATCACATGCTTCAGATCTTGCTGAATTAGATCAACAGTTCTTTACCAATGTGTTGCTCTCCACCTCGACGTTGAT
GCGTTAGCCAAATAAAAAATGCCAGCCTTTGTTTTACAATTGTATATTGCCATGTGCTTCTGGTCTAACCTGGAGTGTCC
TGCACCATTAGATTCCATAATCCATTTGGATGTATTTTTGGGTTCAACATGACTAGTTTCATGTTAGGCCTGGTATTTGA
GAAACTTGGTTGACGCATGGTTGCATCGA--------GATCCTTGTGTATTGCACCAATGTCTTGG-TTAAATTTCGAAT
ACCTAGACCGGATAATT----------TGCAGTGCTGGTTCCCAGCCAGGAAGCAGGACACTT-GGTATCTGAAAGGCAC
TAGTAGTTCATTCCTTCCTCTGGTTTGAAGGGCAGCCCAACGATTATTTCACATTCTGGGTTTGAAAGTGCTGCTCAACG
ACGATTCCACATCCTCGTTCGAAACTGCAGCTGACTGCGCAGGTGCCGACAAGCTCAAGGATCCAGAGCACTGATCACAC
TGACCCTTTTGGCCCATTTGCCAACTTTGCAAAATGAGTGAGCAGAAGTTACATCATGGCGCTCTGGCTTGAAATCTGTG
AGCTTAAGTTT---------------------------------------------------------------------
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-----------------------------------CATCATGTCGTGTTCCTTGCTTTATCTATTTTCAAGGGATAAATA
TGCATTTGGTTGATCAACTGCACTTTATTAATTTCAAATACTTCATGCATTTTTGTTGTAGTATTTTTTTTCTGCGGTCT
GTGTGTTTGAACAGTTCAGTTATGGAAACAATTTCTTGGTTCGTTGCAGGTGGCTAATGTAATTTTGAGCCGGAGCTCAG
TTTCCTTCCATAGCCAGAAGATGAGCTTTGTATCCATCAGTTCAAGACCGAGTTCGCTTCGGTTTAAGATTTGTTGTTCG
GTAGGGACACGTTTCTTCTCTGTCGCAATAGTAGAAGTTTGCCTCCATGCGTTCACAATATCTATATCTTTTTTTCCGAA
CCTCTGTACTTCTATAGGTGGCCAAGTGATTCACCCAGGCGCTTACTGGCTAGCACCATGGATGATGGGCTAGGCAGCCT
GGGTTTGATCTGGAACTCTCATCTTAATAAAACTGATGTCTAGTTCTTCCTAGACATATGTCATTTTTTAAATA-TTTTT
GTATATTAAAATGTGTGAACAAGTTTGTGATTGAAATAGGTGAGAATTGTTTGCGTTGGCAGTAATTGAAATATGTAAAT
AAGTTTAGGGTTAAAATAGGTGAGAATTGTTTACACTGGAGGAAATTCAAACATTAAATATGGGCAAATCATTTCATCAT
TTCATGGAAAATGTTCTTTCAAATTGCAGTCTAGACACCATAGGTGCAGTAAAAATCTTCCTTGGATAACGTTATCGGAT
AAAGATGGCAAATGTTTCAGCATTTTTTTTTACAACCACGCTCGATGTACTGATTTAAGGTAACGATGTTCTTTCGTTTC
TTGAGCAGGCCACGGGTGAGGCACAGGCCAAGAAAGAGACAGTCGACAAGGTTTGTATGATAGTCAAGAAGCAGCTGGCA
GTCCCTGATGGGACCCCTGTCACAGCGGAGTCGAAATTTTCTGAACTTGGTGCTGACTCACTGGATACGGTAAATCCGCA
ACTCCCCATCCCACAGAAATGGCAGTAGCCCAAAAGCAGCGCCGTTCATACGTAACACCGATTGTGTTTTGCAGGTTGAG
ATTGTGATGGGCCTCGAGGAAGAGTTCAACATCACCGTCGATGAAACAAGCGCGCAGGACATTGCAACCGTGCAGGATGC
AGCGGACCTTATCGAGAAGCTTGTGACAGAGAAGACAGCGTAAGCACCTCGGTTCATTGGACAGCTTTAGAAGGCAAAGG
TGTCATCTGGAACCGTGGACTTCTGATTTTTCGGTCGCATTTGGGGCGAGAGAAAATAATTTATGGACAGCTTTGCATTC
AGTCTATGTTGTGTGTTCATTACCATTTGTTATTTCTTCATCCTCTCGAGATTTTGTGTTGTTGCTTAGGGTTAATTACC
CAAAGGCTTCATAAACAAGCTAGGACCATGTCCTAAGTTCGAATTCATATGTGTTGTACTATTGTTATAGAAAAGCTAAT
GGACCTATGAAGATTGAAGAATCACTGCATTTTGTGTTTTATTTTTGCATGTCTGAGAAGTTATACAGCTGTGAATGTAT
TGTTTCTTTTCTTCCATACCACAGCTATGACCCATTCTTCAT---AAAGAGGGTCTCCGATTCTTGGTTCCGCCATAATA
TTTGTT-TTCCCATATGATCACTCGCTTGTTAGATTATTATTTTTAGATAATGTCTCGCTTGCATCATTATGGTGTTGTT
TTGTTGAACTTTTAAGAATGAAGCACATTATAGAACCCAAAATAAAAAAGAAAAAGCACATTTAGTGGGAAGAAAATCTA
CTTTCCCCCCTCGAACTAATTTGGGCTCACTTAACCTTAAGTCAGCCACGGCGGCATTTTAGCCCTTATCTGATTTTTGG
AAGGACAGGATTAAC-CCCAAACAATCTGCAAGATTCCATAAGCTTTTGTTTTATAAAGTGAATACCAGTACCATTTTAG
TTTAGAAATAAGAAAGATCGT-----------------------------------------------------------
------GACATTAACATGCATCATAT------------------------------------------------------
------------------------------------------------------------CGCCCGACCTAGGACGCGCA
GTAC---------TTCGTTAGCAAGGCTCATTTTTTGAACTAACATTTAATATGCATCCTTAACTGCGTGTACAATCCTT
TTTTCAGAATTTTGCGAAATATATAATTATGTTGTTCAATAAACCGGGAAGGGAGACACCCACACCACACCTCACCTCTC
GAGAAAAGAAGTAGACATAGAAGAACCAGAAGAAAA
>chr1D_1
GTCGGCGCAGCCGCGGCGGCGGCCTCGTCATAAACGAGGGTCGCCGCCAGCCTTTCCCTTCTCCCGACGACCACCTTCGC
CTGGTGAGGCCGAAGAAGGAGCCAGCAACGCCGCCAGTCGTCGTCAAGCAGGAGCATCTCGCCATGGCCGCCGCCGACGA
AACCGACATGAAGTAGGCGCGGGACGACTACGTCCGCGAGT-AGATGGAGCGACAGCGCCGCGCCCTCGAGGAGATCGCC
GCCAAGCACCGCGGCCGCGAGGAGGGTGGCGTCATCATCCTCGAGGACAGCGACGAGGAGGCGCCCGGGCCGTCCAACCC
CGTCCGCCACGGCGAACCAGGGTAGGGCTGCAGCAAGGACGGCGGCGGCGGCGTGCAG---GACGACGACGG---CGG--
-CGGCGACTACACAAACTTCTACAGGCTCCTCGGCATG-TAGAATGCTCGGTGGCGGAGGCGGCGGCGGCGTG-------
---GTAGTAGTTTTAG-------TT--TA-----------------GTCTTTA---------------------------
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-----------------------------------------------------------------------AATTATGTT
TTAGTTTGTACAAATATCAAAGA---------------------------------------------------------
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----------------AAATGCCTGAATTTTCTTCAAATTTGTGTCATTTTG----------------------------
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>chr4D_1
GTCGGCGCAGCCGCGGCGGCGGCCTCATCATCAACGAGCGACGCC---ATCCTTCCCCTCCTCCCAACGGCCATCATCGC
CTCGTCATGTCAAAGAAGGAGCCGGCGACGCCGCCCGTCGCCATGAAGCAGGAGCACGCCGACATGGCCGCCGACCTCGA
GATGGGGCTCAAATGGACGCGGGATGGCTACGTCCGGGAGG-AGATGGAGCGCCAGCGCCGCGCCCTCGAGGAGATCGTC
GCTCGCCGCTGCGGGCACGACGAGGGCGGCGTCATCGTCCTCGAGGACAGCGACGAGGAGGCGCCGCCGCCCACCAATCC
CGTCTGCCAAGGCGACCCAGGACAAGGCTGTAGCAAGGACGACGGCGGC---ATGCAA----------------------
--GGCTACTACACCGCTTTCTACAAGCTCCTCGGCATGGCAGTAGGCTCGG----------GGCGGCGGCGGT-------
---GGCGTAGTTTTAT-------TTATTTTCTAAGTTTTT---TTATGTTTTAAATTTTGTACCAATGTCAATGAAA-CC
GTCTGAATTTACTCCAAATT------------------------------------------------------------
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>chr2B_3
--CGGCGCAGCCGCAACGGTAGCCTCGTCATAAACGAGGGCCGCCGGCAACCTTCTCCTCCTTCCCGCAGCCATATTCGC
CTGGTCAGGCCAAAGAAGGAGCCGGTGACGCCGCCTGTCGTTGTCAAGCACGAGCACGCCGACATAGCCGCCGACCTTGA
GACGGGCCTCAAATGGGCGCGGGACGACTATGTCCGGGA-G-AGATGGAGCGCCAGCGCCGCGCCCTCGAGGAGATCACC
GCTCGGCGCCACGGCCGCAACGAGGGAGGCATCATCATCCTCGAGGACAGCAATAAGGAGGTGCCGGCGCCCACCAACCC
CGTCCTCCAAGGCGACCCAGGACAAGGCTGCAGCAAGGACGGCGACGAC---ATGCAC---GATGACGATGACGACAATG
ACGGCGACTACACCGCCTTCTACAAGCTCCTCGGCATG-CAGTAGGCTCGG----------GGCGACGGCGGC-------
---AACGTAGTTCTAT-------TT--TTTCTAAGTTTTTAAGTTGTGTCTTTAATTTTGTACAAATATCAATTGAGACC
GCCTGAATTTTGCCCAAATTTGTGTCATTTTGTACTAAATTTAGCC----------------------------------
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>chr2A_6
-----CGCAGCCGCAGCGGGGGCCTCATCATAAACGAGGGGCGCCACCAGCCTTCCCCTCTTCCCCGTGGCCATCTTCGC
CTCATCAAGCCGAAG---GAGCCGGTAAAGCCGCCTGTCGTCATGAAGAAGGAGCACGTCGACATGGACGTCGACCTCGA
GAGGGGCCTCAAATGGGCGCGGGATGACTATGTCTGGGA-GGAGATGGAGCGCCAGCGCCACGCCCTCGAGGAGATCGCC
GCTCATCACCATGGCCGCGACGAGGGCGGCGTCTTCGTCCTTGAGGACAGCGACGAGGAGGTGCCGCCGCCCACCAACCC
CGTCCACCAAGGCGACCCAGGACAGAGCTGCAGCAAGGACGGCGTTGGC---GTGCAAGACGATGACGACAA--------
----CGGCGACACCGCCTTCTACAAGATCCTCGGCATG-CAATAGGCTCGG----------GGCGGCGGTAGC-------
---GGCGTAGTTTT-------------TTCCTAAGTTTTT---TATGTCTTTATTTTTTGTACAAATATCAACGAAAACC
GCCTGAATTTCATTGAAATT------------------------------------------------------------
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>chr1D_16
---------------GCGGCAGCCTCGTCATAAACGAGCGCCGCCGCCAACCTTCCCCTCCTGCCCACGACCATCTTCAC
CTGGTCAGGCCGAAGCAGGAGCCGGCGAGGCCGCCCGTCGTCGTCAAGCAGGACCATGTCGACATGGCCTCCGACCTCAA
AACCAGCCTCAAATGGGCGCGGGACGATTACGTCCGGGA-GGAATTGGAGCGCTAGCGCCGCGCCCTCGAGGAGATCGCC
GCTCGGCGCCGCGGCCGGGACGAGGGCGGTGTCATCGTCCTCGAGGACAGCGACGAGGAGGCGCCGTCACCGACTAACCC
CGTCCGCCACGGCGACCCAGGACAGGGCTGCAACAAGGACGACAGCGGC---GTGCAG---GATGACGACGA--------
----CGACTACACCGCCTTCTACGAGCTCCT-GGCATG-CATTAGACTCGG----------GGCGGCGACGGGGTAGTTT
TAGGGCGTAGTTTTAT-------TT--TTCTAA--TTTTTTAGCTATTTCTTTAATTTTGTACAAATGTCAATGAAAACC
GCCTGAATTTCGACCAAATTCGTG-CATTTTCTTCCAAATCTAGCC----------------------------------
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>chr5A_693
CTTCAC--------------------------------------------------------------------------
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-----------------AAATGTGGCATGACATGTCACATGTATATCCATTTTGCACATCCACGGCTGAGATATCCATAC
AGATATACTCTGAATTTATTTTCTTCCATTTTTCT------CTCGGAGTATAGTGCATCAGCGTTCTTTTGGACACTTTA
TCCTAAGCCTATCTATTTTATCTCCTATCTGCACTATAATTGCCACCATTGGTTGGTAGCAGCTCCAGAGCCGAGGACCT
CCCGAGCAGAGTAGCACTCCACCTACCAGCCGGCCTCTTCCCACCGCCCCCAAATTCTACCGAGCAGCTCAGCCGGCCAA
CCCATGGCGCACTGCCTCGCCGCCGTTGCCTCCTTCTCGCCGTCCGCCGTCCGCCGGCGGCTGTCCAGCCAGGTGCCGTT
CTCGGACTGACCGCTCTCTTGTCACAGATTTGGTCATTTGCATAGTTTTAGCTTGC--GATTCATGAGATTCCTAGGCTA
TTCCTGTGTGTTTCTTCTAAGTTCGTGGTTGATTTGGTTGGATACTTGGATGAATAGATGCTTTCTTGGTTTGATTCAAT
AGTTCACTGAGTAGCATAAACATGCTTCCTCTTTTGATATCTTGGCGATGTTTCTCACATGCCTGTAATTTCCACACTT-
AGTGTTGAAAAAACAATACCCACTAAATGGAGTATATATTGAGCACATCATAAGATGAGCCCATGCGTTCAGTCCATATA
TTCATTTATCTAGAGAGAAATAGGTACATTTGAACTGGTATAGTATGGTCAGAAAGGCAGAAAAGCTTTAAC---TTACC
TATGAGGTTAATTAACCTTACACTGGTGGGAAAATTTGCTTATTTACACATATTTACTAACGGATGTTGACAATTTGATT
TATTTTAGTACAAACTTCAAAGATTCCAAAATGGCTGCGTTTAACGTAGCCGGCATTGCAACTGGATCTGGATGGCTCAG
TAAGGCTTATTTTAAAATTTTCAGTTTAGTATTCTAATGTAGCCTGGTTCAGAAGATGCAAAGCTCTGGGAAGCCACCCA
AGCACATCACATGCTTCAGATCTTGCTGAATTAGATCAACAGTTCTTTACCAATGTGTTGCTCTCCACATCGATGTTGAT
GCGTTAGCCAAATAAAAAATGCCGGCCTTTATTTTACAGTTGTATATTGCCATGTGCCTCTGGTCTGACCCGGAGTGTCC
TGCACTATTAGATTCCAGAATCCATTTGGGGGTATTTTTGGGTTCAACATGACTAGTTTCATGTTAGGCCTGGTATTTGA
GAAACTTGGTTGACACATGGTTGCATCGTGATGACGTGATCCTTGTGTATTGCACCAATGTCTTGGATTAAATTTCGAAT
ACCTAGACCGGATAATTCATGAAAATTTGCAGTGCTGGTTGCCAGCCAGGAAGCAGGACACTT-GTATCA-GAAAGGCAC
TAGTAGTTCATTCCTTCCTCTGGTTTGAAGCGCAGCCCAACGATTATTTCACATTCTGG-TTCGAAAGCGCTGCTCAACG
ACG------CATCCTCGTTCGAAACTGCAGCTGACTGCGCAGGTGCCGACAAGCTCAAGGATCCAGAGCACTGATCACCC
TGACCCTTTTGGCCCATTTGGCAACTTTGCAAAACGAGTGAGCAGAAGTTCCATCATGGCACTCTGGCTCGAAATCTGTG
AGCTTTTTTTTTTAGAAATGGAGGAGGACCCCCGGCCTCTGCATCTGGACGATGCATGCAGCCACTTTATTAATTATTCA
ACAAGACCTTACAAAGGCATACAATAGTAAGACTGAAGCCGCCGTCTAGGCAACAAAAGTGTCGCTACTCCTATCCAATT
GATGAAGGGATGCTGATAGTCTGGGCCTAATACCAAACAGACCTCGCAGCCAAACCTAACATCTAAGACCTGATGTCCTA
ACCAGGACGCCTGCCGGGTATGGGCACCCACCAGTCCAGCGTGCTCCTCAACCAGGACGCCTGCCAGGTATGAGGCCGCC
GCAGCCACCTGCCACCAATCCATCTTCAGAGCTGTACTGCTGCATGAACGTTGCCCGGTCTAGCTGCCGCCGACGCCACC
ACGACGCCAGACAGCGACGACCTCCTGCGCGAGTCCATCATGTCGTATTGCTTGCTTTATCTATTTTCAAGGGATTAATT
TGCATTTGGTTGATCAACTGCACTTTATTAATTTCAAATAGTTCATGCATTTTTTCTGTACTATTTTTTTTCTGTGGTCT
GTGTGTTTGAACAGTTCAGTTATGGAAACAATTTCTTGGTTCGTTGCAGGTGGCTAATGTAATTTCGAGCCGGAGCTCAG
TTTCCTTCCGTAGCCAGAAGATGAGCTTTGTATCCATCAGTTCAAGACCGAGTTCACTTCGGTTTAAGATTTGTTGTTCG
GTAGGCACACATTTCTTCTCTGTCGCAATAGTAAAAGTTTGCCACCATGCGTTCACAATATCTATATCTTTTTTTCCGAA
CCTTTGTACTTCTATAGGTGGCCAAGTGATTCACCCAGGCGCTTACTGGCTAGCACCATGGATGGTGGGCTAGGCAGCCT
GGGTTCGATCTGGAACTCTTATCTTAATAAAACTGATGTCTAGTTCTTCCTCGACGTACGTCATTTTTAAAATATTTTTT
GTATATTAAAATGTGTGAACAAGTTTGAGATTGAAATAGGTGAGAACTGTTTGCGTTGGCAGTAATTGAAATATGTAAAT
AAGTTTAGGGTTAAAATAGGTGAGAATTGTTTACACTGGCGGTAATTGAAACATTAAATATGGGCAGGTCTTTTAATCAT
TTCATGGCAAATGTTCTTTCAAATTGCAGTCTAGACACCATAGGTGCAGTAAAAATCTTCCTTGGGTAACATTATCAGAT
AAAGATGGCAAATGTTTCAGC---------------CACGCTCGATGTACTGATTTGAGGTAGTGACGTTCATTCGTTTC
TTGAGCAGGCCACAGGTGAGACACAGGCCAAGAAAGAGACAGTCGACAAGGTTTGTATGATAGTCAAGAAGCAGCTGGCA
GTCCCTGATGGGACCCCTGTCACAGCGGAGTCAAAATTTTCTGAACTTGGTGCTGACTCACTGGATACGGTAAATCCGCA
ACTCCCCATCCCACAGAAATGGCAGTAGCCCAAAAGCAGCGCCGTTCATACGTAACACCGATTATGTTTTGCAGGTTGAG
ATTGTGATGGGCCTCGAGGAAGAGTTCAACATCACCGTTGATGAAACAAGCGCGCAGGACATTGCAACCGTGCAGGATGC
AGCGGACCTTATCGAGAAGCTTGTGACAGAGAAGACCGCGTAAGTGCCTCGGTTCATTGGACAGCTTTAGAAGGCAAAGG
TGTCGTCTGGATCTGTGGGCTTCTGATTTTTCGGTCGCATTTGGGGCGAGAGAAAATAATTTATGGACAGCTTTGCATTC
AGTCTATGTTGTGTGTTCATTACCATTTGTTCTTTCTTCATCCTCTTGAGATTTTGTGTTGTTGCTTAGGGTTAATTACC
CAAAGGCTTCATAAACAAGCTAGGACCATGTCCTAAGTTCGAATTCATATGTGTTGTACTATTGTTATAGAAAAGCTAAT
GGACCTATGAAGATTGAAGAATCACTGCATTTTGTGTTTT--TTTTGCATGTATGAGAAGTTATACAGCTGTGAATGTAT
TGTTTCTTTTCTTTCATACCACAGCTATGACCCATTTTTCAT---AAAGAGGGTCTCCGATTCTTGGTTCCGCCATAATT
TTT-TT-TCCCCATATGATCACTCGCTTGCTAGATTATTAATTTTTGATAATGTCTTGCTTGCATCATTATGGTGTTGTT
TTGTTGAACTTTTAAGAATGAAGCACATTATAGCACCCAAAATAAAAAGAAACAAGCACATTCAGAGGGAAGAAAATCTA
CTTTCCCCCCTCGAACTAATTTGGGCTCACTTAATCTTAAGTCAGCCAAAGCGGCATTTTAGCCCTTATCTGTTTTTTGG
AAGAACATGATTAACACA-AAAAAATCTGCAAAATTCCATATGCTTTTGTTTTATAAAGTTTATACGAGTATAATTTTAG
TTTAGAAATAAGAAAGATCTCAATTGTGAAGGAAAAAACAAATTGTTTATATTGCACAGGTCACAACTTTTTCATATTTT
CAAATCGACATTAATATGCATCATATTCTTGACACTTCTACTTCGGTACACCCCCTAAACACATAATAGGCTCAGATTAT
TCGATACCTCTTCGTTAGTAAGGGCATGATGGTCATATTTGTAAAAGTGGCCCGCCCGCCCGCCCGACCTAAGACGTGCA
GTACATATACGCATTCGTTAGCAAGGCTCATTTTTTGAACTAACATTTAATATGCATCTTTAACTGCATGTACAATCCTT
TTTTCAGAATTTTGGAAAATATATAATTATGTTGTTCAATAAGCCGGAAAGGGACA----CACACCACACCTCACCTCTC
GAGAAAAGAAGTAGACATAGAAGAACCATAAGAAAA
>chr5D_694
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-------------TTACAAATGTGGCATGACATGTCCCATGTATATCCATTTTGCATATCCACGGCTGAGGCATCCCTAT
AGATATACTCTGAATTTATTTTCTTCCATTTTTCT------CTCGGAGTATAGTGCATCAGCGTTCTTTTGGACACTTTA
TCCTAAGCCTATCTATTTTATCTCCTATCTGCACTATAATTGCCACCATTGGTTGGTAGCAGCTCCAGAGCCCAGGACCT
CCCGAGCAGCGTAGCACTCCACCTACCAGCCGGCCTCTTCCCACCGCCCCCAAATTCTACCGAGCAGCTCAGCCGGCCAA
CCCATGGCGCACTGCCTCGCCGCCGTTGCCTCCTTCTCGCCGTCCGCCGTCCGCCGGCGGCTGTCCAGCCAGGTGCCGTT
CTCGGACTGACCGCTGTCTTGTCACAGATTCGGTCATTTGCATAGTTCTAGTTTGCGAGATTCATGAGATTCCAAGGCTG
TTCCTGTGTGTTTCTTCTAAGTTCGTGGTTGATTTGGTTGGATACTTGGATGAATAGATGCTTTCTTGGTTTGATTCAAT
AGTTCACTGAGTAGCATAAACATGCTTCCTCTTTTGATATCTTGGCGATGTTTCTCATATGCCTGTAATTTTCACACTTA
AGTGTTGAAAAAACAATACCCACTAAATGGAGTATATATTGAGCACATCATAAGATGTGCCCATGCGTTCAGTCCATATA
TTCATTTATCTAGAGAGAAATAGGTACATTTGAACTGGTATAGTATGGTTAGAAAGGCAGAAAAGCTTTAACTTGTTACC
TATGAGGTTAA--AACCTTACACTGGTGGGAAAATTGGCTTATTTACACATATTTACTGACAGATGTTGACAATTTGATT
TATTTTAGTACAAACTTCAAAGATTCCAAAATGGCTGCGTTTGACGTAACCGGTGTTGCAACTGGATCTGGATGGCACAG
TAAGGCTTATTTAAAAAAAAT-AGTTTAGTATTCTAATGTAGCCTGGTTCAGAAGATGCAAAGCTCTAGGAAGCCACCCA
AGCACATCACATGCTTCAGATCTTGCTGAATTAGATCAACAGTTCTTTACCAATGTGTTGCTCTCCACATCGATGTTGAT
GCGTTAGCCAAATAAAAAATGCCGGCCTTTGTTTTACAGTTGTATATTGCCATGTGCCTCCGGTCTGACCCGGAGTGTCC
CGCACTATTAGATTCCAGAATCCATTTGGAGGTATTTTTGGGTTCAACATGACTAGTTTCATGTTGGGCCTGGTATTTGA
GAAACTTGGTTGACGCATGGTTGCAT--------CGTGATCCTCGTGTATTGCACCAATGTCTTGGGTTAAATATCGAAT
ACCTAGACTGGATAATTCATGAAAATTTGCAGTGCTGGTTGCCAGCCAGGAAGCAGGACACTTGGTATCA-GAAAGGCAC
TAGTAGTTCATTCCTTCCTCTGGTTTGAAGCGCAGCCCAACGATTATTTCACATTCTGG-TTCGAAAGCGCTGCTCAACG
ACGATTCCACATCCTCGTTCGAAACTGCAGCTGACTGCGCAGGTGCCGACAAGCTCAAGGATCCAGAGCACTGATCACCC
TGACCCTTTTGGCCCATTTGGCAACTTTGCAAAACGAGTGAGCAGAAGTTCCATCATGGCACTCTGGCTCGAAATCTGGG
AGCTTAAGTTT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------CATCATGTCGTGTTGCTTGCTTTATCTATTTTCATGGGATTAATT
TGCATTTGGTTGATTAACTGCACTTTATTAATTTCAAATAGTTCATGCATTTTTGCTGTAGTATTTTTTTCTA-TGGTCT
GTGTGTTTGAACAGTTCAGTTATGGAGACAATTTCTTGGTTCGTTGCAGGTGGCTAATGTAATTTCGAGCCGGAGCTCAG
TTTCCTTCCGTAGCCAGAAGATGAGCTTTGTATCCATCAGTTCAAGACCGAGTTCGCTTCGGTTTAAGATTTGTTGTTCG
GTAGGCACACATTTCTTCTCTGTCGCAATAGTAAAAGTTTGCCACCATGTGTTCACAATATCTATATCTTTTTT-CCGAA
CCTTTGTACTTCTATAGCTGGCCAAGTGATTCACCCAGGCGCTTACTGGCTAGCACCATGGATGGTGGGCTAGGCAGCCT
GGGTTCGATCTGGAACTCTTATCTTAATAAAACTGATGTCTATTTCTTCCTAGACATACGTCATTTTTAAAATACCTTTT
GTATATTAAAATGTTTGAACAAGTTTGAGATTGAAATAGGTGAGAATTGTTTGCGTTGGCAGTACTTGAAATATGTAAAT
AAGTTTAGGGTTAAAATAGGTGAGAATTGTTTACACTGGCGGTAATTCAAACATTAAATATGGGCAAATATTTTCATCAT
TTCATGGCAAATGTTCTTTCAAATTGCAGTCTAGACACCATAGGTGCAGTAAAAATCTTCCTTGGATAACGTTATCGGAT
AAAGATGGCAAATGTTTCAGCATTTTTT---ACAGCCACGCTCAATGTGCTGATTTGAGGTAATGATGTTCTTTCGTTTC
TTGAGCAGGCCACAGGAGAGGCACAGGCCAAGAAAGAGACCGTCGACAAGGTTTGTATGATAGTCAAGAAGCAGCTGGCA
GTCCCTGATGGGACCCCTGTCACAGCGGAATCAAAATTCTCTGAACTTGGTGCTGACTCACTGGATACGGTAAATCGGCA
ACTCCCCATCCCACAGAAATGACAGTAGCCAAAAGAAGCGTCA-TTCATACATAACACCGATTATGTTTTGCAGGTTGAG
ATTGTGATGGGCCTCGAGGAAGAGTTCAACATCACCGTCGATGAAACAAGCGCGCAGGACATTGCAACCGTGCAGGATGC
AGCGGACCTTATCGAGAAGCTTGTGACAGAGAAGACCGCGTAAGTGCCTCGGTTCATTGGACAGCTTTAGAAGGCAAAGG
TGTTGTCTGGATCTGTGGACTTCTGATTTTTCGGTCGCATTTGGGGCGAGAGAAAATAATTTATGGACAGCTTTGCATTC
AGTCTATGTTGTGTGTTCATTACCATTTGTTCTTTCTTCATCCTCTCGAGATTTTGTGTTGTTGCTTAGGGTTAATTACC
CAAAGGCTTCATAAACAAGCTAGGACCATGTCCTAAGTTCGAATTCATATGTGTTGTACTATTGTTATAGAAAAGCTAAT
GGACCTATGAAGATTGAAGAGTCACTGCATTTTCTGTTTTC---TTGCATGTCTAAGAAGTTATACAGCTGTGAATATAT
TGTTTCTTTTCTTTCATACCACAGCTATGACTCATTTCTCGTAAAAAGGAGGGTCTCCGATTCTTGGTTCTGCCATAATA
ATT-TTATTCCCATATGATCACTCGCTTGCTAGATTATTAATTTTAGATAATGTCTCGCTTGCATCGTTATGGTGTTGTC
TTGTTGAACTTCAAAGAATCAAGCACATTATAGCACCCAAAATAAATAAATAAATAATC----------AAGCACATCTA
CTTTCCCCCGTTGAACTAATTTGGGCTCACTTAACCCTAAGTCAGCCACACC-------TAGCCCTTATCTGATTTTTGG
AAGGGCAGGATTAAC-CA-AAAGAATCTGCAAAATTCCATACGCTTTGCTGTTATAAAGTGTATACCAGTACAATTTTAG
TTTAGAAATAAGAAAGATC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
>SNPs
---------S----S-------------------S------------------------------------------S--
---------------------------S-----------S----------------------------------------
--------------------------------------------------------------------S--S--------
S-------------------------------------------------------------------------------
S---------------S--S--------------------S---------------------------------------
--S------------------------S------S------------S-------------------S----S-------
-----SS---SS-SSSSSSSSSS-----------------------------------------S---------------
----S----------------S-----------SSS----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS--------------------------------------S--------S-S-----------------
---------SS-----------S------------SSSSSS-------------------------------S-------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
----------------------S-------------S------------------------------S----------S-
-------------------------------------------------------------------------------S
-------------------------------------------------------------------------S------
---------------------------------------S----------------------------------------
-------------------------------------S------------------------------------------
----------------------------------------------------------S---------------------
-S------------------------------------------------------------------S----S------
-----------------------S--------------S------------------S--------S---S---------
-----S-----------S------------S-------------------------------------------------
----------------------------S---------------------------------------------------
----------------------------------------S------------------------SSSSSS---------
------------------------------S----------------------------S--S-----S-----------
------------------------------------------------------------------------------S-
--------------------S-------------S---------------S---------S--------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S-------------------------S---S
----------------------------------------S--------------S------------------S-----
-----------------------------------------------------------------S--------------
---------S----------------------------------------------------------------------
-----S----S----------------------S---------S------------------------------------
---S------------------------------------------------------------S---------------
-----S-------------S--------------------------------------S---------S-----------
---------------------------S----------------------------------------------------
---------------------------------------S--S---------------------------S---------
-------S------------------------------------------------------------------------
----------------------------SSS---S---------------------S------S----------------
-------------S------------------------------------------------------------------
--------------------------------S-----------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
------------------------------------S-------SS----------------------------------
----S------S-S------------------------------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------SS--------------------------------------
-------------S----------------------S-------------------------------------------
---S-------------------------S----------S---------------------------------------
---------------------------------S---------------S------------S--S--------------
-------------------------------------------------S------------------------------
-----------------SS---S---------S--------S-------------------S----------S-------
-------------------SS-----------------------------------------------------------
--------------S-----------------------------------------------------------------
-----------------------------------------------------------------------S----S---
----------------------------------------------------------S--------S------------
--------------SS--------------------------S----S------S-SSSS--------------------
----------------------------S-------
>forward_637
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---------------------------------------------------------TCAAAAAGCGGCGTTTGGAG---
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>reverse_2319
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------------------------------------------------------------------------------AC
TGACCCTTTTGGCCCATT--------------------------------------------------------------
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>forward_639
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-----------------------------------------------------------AAAAAGCGGCGTTTGGAGTC-
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>reverse_2955
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--------------------------------------------------------------------------CGGTCT
GTGTGTTTGAACAGT-----------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------
>forward_663
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---TGGGACAACCACTCATGTCG---------------------------------------------------------
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>reverse_3126
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-----GACACGTTTCTTCTCTGTCGC------------------------------------------------------
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------------------------------------
>forward_704
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--------------------------------------------CAGGCCACGCTATTTCAAGC----------------
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>reverse_3154
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---------------------------------GAAGTTTGCCTCCATGCGTT---------------------------
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>forward_3131
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-----------------------------------------------------------------------TGTTGTTCG
GTAGGGACACG---------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4046
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---------------------------------------------ACCTCGGTTCATTGGACAGC---------------
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--------------------------------------------------------------------------------
------------------------------------
