>input_sequence_31472
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----------------------------------------A------TGCTACGATCGATGAGACCCTTCGTCCTGGGGC
TTTTGATCACTGTCTGTGGTTTGAGCTTGTTGCTCCCCTGCCCGCCAGCCGTCGCGGCGGCGCGCGAGAGCCTCACCCGG
GGCGCCTCCATCGCCGTCGAGGACTATGCCACCGACTTCCTGCGCTCGCCGGGCGGCACCTTCGCCTGCGGCTTCTACCG
CGTCTCCCCCACCGTTTTCACCTTCTCCGTCTGGTTCACGCGCGCCAAGGAACGCTCCGTCGTCTGGACCGCCGACCGCA
CG------------CGTCCTGTCCACAGCAAGGGCTCGCGCCTCACGCTAGATAAGCGCGGCGGCGCGCTCATCCTCACT
GACTACGACGGCGAGCCGGTGTGGAACTCCACCGTGGCCGGCGCCCCGACGGCCTCGCGCGCC--CGGCTCCGCGACACC
GGCAACCTCGTCGTGGTGGACGCCGACGGGAGAGCGCTGTGGCAGAGCTTCCACTTCCCCACGGACACGCTGCTGCCGAC
GCAGCGTCTCACCGCGACGACTCGCCTGGTTTCCTCGCGCGACGGCAGGCTGCTCTCCTCCGGCTACTACAGCCTCGGGT
TCAGCGACTACGCCATGCTCTCCCTCTTCTACGACAACGGCAACTTC---TCCAGCATCTACTGGCCCAACCCCTACAAC
AACTACGTCGCCAACAACCGCAGGATCTACAACTTCACCCGCGAGGCCGCCATGGACGCGCTCGGCAACTTCCTCTCCAG
CGACAACGCCAACTTCCAGGCGGCCGACCTCGCCACCGCCGGTGTCCGGAGGAGGCTCACGCTCGA--CGCGGACGGCAA
CCTCAGGGCGTACAGCCTGGACGCGGCGACGGGGACGTGGGCGGTGTCGTGGATGGCGTTCCGCAACCCCTGCACCATCC
ACGGCGTGTGCGGCGCCAACGCGGTGTGCCTCTACGCGCCGGCGCCTTCGTGCGCCTGCGCGCCGGGGCACGAGCGGACC
GACCCCGGCGACTGGACCA------------------GAGGGTGCCGGCCGACTTTCCGGCAGCACCAGTGCGGGAAGCC
GACGCGGACGCCGACGAAGCTGATGGCACTGCCGC----ACTCCGACTTCTGGGGCTACGACCTCAACGACGGCGAGATC
ATGCCGTTGGCGAAGTGCGCCAGGAGGTGCCGCACCAGCTGCGCATGCGTCGCGTTCCAGCACAAGGCCAACAT---GGA
GTGCTACCTCAAAAGCGTCCTCTTCAACGGCAGGACGTTCCCCGGCTTGCCGGGGACGGTGTACATCAAGGTCCCGGTAG
ACTTCGTCGTCCCGGAGTTCCACGTCCACCAATGGCAAACGCACGTACACGGCGGCCTTGCCATCCTTGAGGAGAACATC
ACCGGCTGCGGCGACCGCGCCGCTCAAGAGGTCCTCCTCAACGCCACCGCCTTGTCACGCAAGCACGTCCTTGACGCCGC
GGGAAAACCGGTGTGGCCGTACCTGTACGGGTTCCTGTCGGCGCTGCTCGTCGTGGAAGCCGTTGTCATCGGGCTCGGCT
GCCTGCTCTTCTCCAGGAGGGGACTGTTCACGCGGTCCTCTCCGGTGTACCCCATGGACGAAGGCTACAGACTCATCCTC
CTCACCACGAGTTTTCAGAGGTACAGCTACGCGGCGATCAAGAAGGCCACGGGGAACTTCGCCGACGAGATCGGCCGCGG
CGGGTCTGGAGTGGTGTACAGGGGCGTTCTCGACGACGGCCGGGTCGTGGCCGTCAAGGCGCTTACGACGAGCGTGAGCC
GCTCCCACGGGGAGGAGGAGTTCCAGGCGGAGCTGAGCGTGATCGGCAGGATCTACCACATGAACCTGGTGAGGATCATC
GGCTGCTGCTCCCAGGGCAAGCACCGCATCCTCGTCTCCGAGTTCATCGAGAACGGCTCGCTCGCCACGATGTTGTTGTT
GGACGAAGACGGCGACGGTGGCG------------ACCACGAGGTCCTCGGGTGGAGCCAGCGGTTCCGGATCGCCGTCG
GCGTGGCGAGGGGCCTCGCCTATCTGCACAGCGAGTGCCTCGAGTGGATCATCCACTGCGACATGAAACCGGAGAACATA
TTGCTGGACCGTGATCTGGAGCCCAAGATCACCGACTTCGGGCTCGCCAAGCTGCTGGACCGCCGCCCCGAGGGGTCCGC
CTCTCGCGCAGGGCGGGAGGCGAACCCGTCGGGGCGGATCAGGGGGACGAGGGGTTACATGGCGCCGGAATGGGTGTCGA
GCCTGGCCATCAGCGACAAGGTCGACGTGTACAGCTTCGGCGTGGTGCTGCTGGAGCTGGTAAAAGGGGTCAGGGTGGCG
GACGGCGACCAGAATACGGATGTTAGGGCCGTGGCCAAGACTGTGGCCGAGAAGGTGCATTCCGGCAGCATGGAAGATCT
TGTGGATGACCGGCTCGCCGGCGACTTTAACCGCGCGCAGGTGAAGGTGGTGGTTGGTGTTGCCTTGTCGTGCTTGGAGG
AGGAGAGGAACAGGCGGCCGAGCATGAGCGCGGTGGTGCAGGCGCTCGTCTCCGTTGAAGATGCGTGA------------
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>chr4B_1_TraesCS4B01G130700
TCATATCCCAAAACCTCTGTTGTCCTTTGTGCTACTAT----CTTGATTTTATTTACCGACGAGCTTCATTTCCTTTTCT
TGATTCAGTTGCTCGCATACCACCTTACTGTTCTCCGTGGATTCGATGTCGACCAGCCAAGGAATCTGGCCAAGAGTGTG
ACTACACAGTAAGCATACCAGACGCCTGTGCTCGT-GCGCACGCACACACACATACAAAGTAAACGAAATCATACTTATT
TTAGAGAA-AAGTAAGTAAAGAAAGCAAGTGTTTGCC-------------------------------------------
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---------------TCCGGGTTGTGTCGACATTGTA-------CTGTAGCGTAATTAATTTACTAGTAGATGATGATTA
AGCAAAGATGCCTGAGGTGGTTACCATTGCATTACACTGTGTTGATTGGTCAACTGATTGCGAAGTATATGTCAGCTATT
CTCTACTGATGACGATCCATTGACTCACCGCGGTTTTGCAAGGTGTCCCAGAACTGAAATTGCGTGCAGCTTTTCCATTG
GCTGATGTGCCGAGCCCGCAAGGCACCACCTTGTGTATATTGTATGGTGTCCATACAGTGAGATTATCTAGACCAT-TTT
GTCTAGAGAGTCAGCGCTACAGATCATCAAACCAAGAGCTGACTGAGATTAACTTTTGCTTATATAACCACCA---GTGC
ATTATAGTACACTGTTGCCGCAGAACCATGGACAGGACAACTGGACAAGTGGTGTGAAAAGCCAATCTTTGCTCGTCAGC
TTTCTTTGAGCTCAAGCATCAGAGTTCCAGTCAGATTCAACCAAACCGACCGACTAAACTCCTCGTGATGCTTATACAAT
AATCAGATCACAGGAACGGAACCTCCAGTGAGCACTAGTTTATTACACGATGCTTAATTACCTCCCAAGAAATTCCATCT
CATCTTCCTGGATCGCCGTTGATGCATAAAATAAACCTG-TTGACTTGACCTGATTCCT----CTACTACATATGAACAG
TGATATTCACTGACCTGTCCAAATCAACAACATTCCAGTGA------TGCTACGATCGATGAGACCCTTCGTCCTGGGGC
TTTTGATCACTGTCTGTGGTTTGAGCTTGTTGCTCCCCTGCCCGCCAGCCGTCGCGGCGGCGCGCGAGAGCCTCACCCGG
GGCGCCTCCATCGCCGTCGAGGACTATGCCACCGACTTCCTGCGCTCGCCGGGCGGCACCTTCGCCTGCGGCTTCTACCG
CGTCTCCCCCACCGTTTTCACCTTCTCCGTCTGGTTCACGCGCGCCAAGGAACGCTCCGTCGTCTGGACCGCCGACCGCA
CG------------CGTCCTGTCCACAGCAAGGGCTCGCGCCTCACGCTAGATAAGCGCGGCGGCGCGCTCATCCTCACT
GACTACGACGGCGAGCCGGTGTGGAACTCCACCGTGGCCGGCGCCCCGACGGCCTCGCGCGCC--CGGCTCCGCGACACC
GGCAACCTCGTCGTGGTGGACGCCGACGGGAGAGCGCTGTGGCAGAGCTTCCACTTCCCCACGGACACGCTGCTGCCGAC
GCAGCGTCTCACCGCGACGACTCGCCTGGTTTCCTCGCGCGACGGCAGGCTGCTCTCCTCCGGCTACTACAGCCTCGGGT
TCAGCGACTACGCCATGCTCTCCCTCTTCTACGACAACGGCAACTTC---TCCAGCATCTACTGGCCCAACCCCTACAAC
AACTACGTCGCCAACAACCGCAGGATCTACAACTTCACCCGCGAGGCCGCCATGGACGCGCTCGGCAACTTCCTCTCCAG
CGACAACGCCAACTTCCAGGCGGCCGACCTCGCCACCGCCGGTGTCCGGAGGAGGCTCACGCTCGA--CGCGGACGGCAA
CCTCAGGGCGTACAGCCTGGACGCGGCGACGGGGACGTGGGCGGTGTCGTGGATGGCGTTCCGCAACCCCTGCACCATCC
ACGGCGTGTGCGGCGCCAACGCGGTGTGCCTCTACGCGCCGGCGCCTTCGTGCGCCTGCGCGCCGGGGCACGAGCGGACC
GACCCCGGCGACTGGACCA------------------GAGGGTGCCGGCCGACTTTCCGGCAGCACCAGTGCGGGAAGCC
GACGCGGACGCCGACGAAGCTGATGGCACTGCCGC----ACTCCGACTTCTGGGGCTACGACCTCAACGACGGCGAGATC
ATGCCGTTGGCGAAGTGCGCCAGGAGGTGCCGCACCAGCTGCGCATGCGTCGCGTTCCAGCACAAGGCCAACAT---GGA
GTGCTACCTCAAAAGCGTCCTCTTCAACGGCAGGACGTTCCCCGGCTTGCCGGGGACGGTGTACATCAAGGTCCCGGTAG
ACTTCGTCGTCCCGGAGTTCCACGTCCACCAATGGCAAACGCACGTACACGGCGGCCTTGCCATCCTTGAGGAGAACATC
ACCGGCTGCGGCGACCGCGCCGCTCAAGAGGTCCTCCTCAACGCCACCGCCTTGTCACGCAAGCACGTCCTTGACGCCGC
GGGAAAACCGGTGTGGCCGTACCTGTACGGGTTCCTGTCGGCGCTGCTCGTCGTGGAAGCCGTTGTCATCGGGCTCGGCT
GCCTGCTCTTCTCCAGGAGGGGACTGTTCACGCGGTCCTCTCCGGTGTACCCCATGGACGAAGGCTACAGACTCATCCTC
CTCACCACGAGTTTTCAGAGGTACAGCTACGCGGCGATCAAGAAGGCCACGGGGAACTTCGCCGACGAGATCGGCCGCGG
CGGGTCTGGAGTGGTGTACAGGGGCGTTCTCGACGACGGCCGGGTCGTGGCCGTCAAGGCGCTTACGACGAGCGTGAGCC
GCTCCCACGGGGAGGAGGAGTTCCAGGCGGAGCTGAGCGTGATCGGCAGGATCTACCACATGAACCTGGTGAGGATCATC
GGCTGCTGCTCCCAGGGCAAGCACCGCATCCTCGTCTCCGAGTTCATCGAGAACGGCTCGCTCGCCACGATGTTGTTGTT
GGACGAAGACGGCGACGGTGGCG------------ACCACGAGGTCCTCGGGTGGAGCCAGCGGTTCCGGATCGCCGTCG
GCGTGGCGAGGGGCCTCGCCTATCTGCACAGCGAGTGCCTCGAGTGGATCATCCACTGCGACATGAAACCGGAGAACATA
TTGCTGGACCGTGATCTGGAGCCCAAGATCACCGACTTCGGGCTCGCCAAGCTGCTGGACCGCCGCCCCGAGGGGTCCGC
CTCTCGCGCAGGGCGGGAGGCGAACCCGTCGGGGCGGATCAGGGGGACGAGGGGTTACATGGCGCCGGAATGGGTGTCGA
GCCTGGCCATCAGCGACAAGGTCGACGTGTACAGCTTCGGCGTGGTGCTGCTGGAGCTGGTAAAAGGGGTCAGGGTGGCG
GACGGCGACCAGAATACGGATGTTAGGGCCGTGGCCAAGACTGTGGCCGAGAAGGTGCATTCCGGCAGCATGGAAGATCT
TGTGGATGACCGGCTCGCCGGCGACTTTAACCGCGCGCAGGTGAAGGTGGTGGTTGGTGTTGCCTTGTCGTGCTTGGAGG
AGGAGAGGAACAGGCGGCCGAGCATGAGCGCGGTGGTGCAGGCGCTCGTCTCCGTTGAAGATGCGTGAACCCAAAGGTGA
TCTGCCCGCTTCTCC-TTGGAACAGACGACGTTTACTTTATTTAATTTAT--TTTGGCCGATCAGTAATTCATGTAC---
--------------TCACCACTTTTGCTCACTCTTAGTGATAAACGTATTCTCCG------------AATACTATGCTGC
CAAACGTAGTCTTCGCCCCCAAAAGTGCACGTCACTTAGCGCGTTTCTAACCGAATCCACAATAAGACCGTGAAGGAGGA
TAAATTCGATAATGTATAGTGGAGTAAAAGTTGTCCTCCACATCCGGCTGGAATGGATAGCCCAGACCCTTTCCTCACCC
TGCCGGTTTTCACCGTCGAAAATCACCCACACGCCGCTGCCCGTGCGGAAGAAAAGGCTGGGAATGAAAAAAACACACCG
AGTTCAAGCTCCTCCTCCAATCGCCACAATGGCCTCCGGGGTGGCCACTGCCTCTCCAGCAATGGCCCACCGCCTTCCCG
CCGCTCCCGCCGGAGCTAAACGAGCTCGAAAGCCAACGGCGGCGGCGGCGGCGCTCGCTGAGGCGGCCGCGAAGAAGAAG
ATGAAGAAGGACATAACGACGCCTTGTCCGTGACCGACGCCTCATGCAGCTACTCCGGCGCCCCCTATGGCCATTGCTCC
AGCGCGGGCGGCGGCCGCAGCCGGCAACAAGCATCGCGGCCACCCAAGTGCTCGACGAAATGCCTACAAGGTAAAAATAA
ATTTCTCGGCCATGGTGATTGTTTGTAGCCAATCGGTGATTCTTTGTAGTCGTTGGTGATGTAGTTTCTTTGTTTCATTG
TCATAGTGCGGAGATGAACACGACCGAGTTCTTAGCATCCAGCGGTCAAGGTCACTGTAACGCCCGGATAATCTTGCTAC
AGTAATCCCACGCTAATCATGGCACGTCATCCCGATTACTGTTGCTATCCTCGAAATAATTCGAAACCGTTCAAATTCAA
AATTCAAATTGATGAAAACAATAAAAGTTTTCAAAATTTAAAATAAAATTGTTCGGTGGT
>chr4D_1
TCGTATCCCAAAACCTTTGTTGTCCGTTGTGCTA-TAT----CTTGATTTTACTTACCGACGAGCTTCATTTCCTTTTCA
TGATTCAGTTGCTCGCATACCACCTTACTGTTCTCCGTGGATTCGATGTCGACCAGCCAAGGAATCTGGCCAAGAGCGTG
ACTACACAGTAAAGCATACCACAGGGCTGCGCCACAGCGCGCGCCCACACACACACAAAGTAAACGAAATCATA-TTTTT
TTAGAGAACAAATAAGTAAAAGAAGCAAGTGTTTGCCGGGAGCAACTAGTTAACGAGCGCTTCGGGAGCCTCGCAACGAT
CAGCGCCACTTGGCGCGCTCTCAGCCATTCGCCACGTGTCGCGCTCTGGACGCTCCCTTCGGATTTTGTTTTTTATTTTT
CCACACGCTTTTTCGGCTTTTTAAACGGTTTTTTTTTCGGTTTTTTCGACGTTTTGGTTTCCCCCGGTCTTTCTTAGCTT
TTCGATTAAAAAAAATTAGCGAAAAGACGCGTTTTTCTTCCTTTCGCGAAAGTCACGGTTTTTCTTCCGCAAGAGGCATG
GTTGTGCTTTATCGAGAGTCACGGCCGTGCCTTTCGGAAACGAAAAAAAAACGCGTTTTCTGTTTTTTTTTCGCGAGAGT
CACGGTTTTTGCTTCCGCGAGAGGCACGGTTGTGCTTTCGCGAGAGTCACGGCCGTGCCTCTCGGAAAGGGAAAAACAAA
ACGCGTTTTCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCCGTGCCTCTCGAAAAGGGAAAAAATACGTGTTTTCTGTTTTTTTTTCTTTCGCGAGAGTCACGG
TTTTGCTTTCGCGGGAGGCACGGTTGTGCTTTCGCGAGAGTCACGCCCGTGCCTCTCGGAAACGAAAAAAAAACGCGTTT
TCTGTTTTTTTTCTTCCACGAGAGTCACGGTTTTGCTTCCACGAAAGGCACGGTTGTGATTTCGCGAGAGGCACGGGCGT
GCCTCTTTCGGAAAGGGAAAAAACCGTGCTCCCGGTTCGGTTTTTTCGCCTGATTTTTTCGTCCGTTTTTTTCTGAAAAA
AAATTCGTCAAAACATATCAACATGGGATCTAATTTTGAAGATCTTGACGCGAAGAATTCAATGATGAAAACGGTTCGAG
ATTTGGACGCACGGTTTAAGAGATAAAACGTTTTGAATAAACGGATTTACGAAAAAAGGAAAAACTCCCAGGTTGCGACA
AGTGGCGCGCTCCATGTGCGCCACTTGTCGTGACTTGGGAAATTGGAGTGTTCTTTACCACGAGTACTCCTTAATTAGTG
ATTTCGAAGTTTGCCTCCGGGTTGTGTAAATATTTTACTGTAGGCTGTAGCGTAACTAATTTACTAGTAGATGATGATTA
AGCA-AGATGCCTGAGGTGGTTACCATTGCATTACACTGTGTTGATTGGCCAACTGATTACGAAGTATATGTCAGCTATT
TCCTACTGATGACGATCCATTGACTCACTCCGGTTTTGCAAGGTGTCCCAGAACTGAAATTGCGTGCAGCTTTTCCATTG
GCTGATGTGCCGAGCCCGCAAGGCACCACCTTGTGTATATTGTATAGTGTCCATACAGTGAGATTGTCTAGACCAT-TT-
GTCTAGAGAGTCAGCGCTACAGATCATCAAACCAAGAGCTGACTGAAATTAACTTTTGCCAATATAACCACCACCAGTGC
ATTATAGTACACTGTTGCCGCAGAACCATGGACAGGACAACTGGACAAGTGGTGTGAAAAGCCAATCTTTGCTCGTCAGC
TTTCTTTGAGCTCAAGCATCAGAGTTCCAGTCAGATTCAACCAAACCGACCGACTAAACTCCTCGTGATGCTTATACAAT
AATCAGATCACAGCAACGGAACCTCCAGTGAACACTAGTTTATTACACGATGCTTAATTACCTCCCAAGAAATTCCATCT
CATCTTCTTAGATCACCGTGGATGCATAAAATAAACCTGTTTGACTTGACCTGATCACTCCGTAG--TACATATGAACAG
TGATCTTCACTAACCTGTCCAAATCAACAACATTCTAGTGA------TGGTACGGTCGATGAGACCCTTCGTCCTGGTGC
TTTTGATCACTGTCAGTGGTTTGAGCTTGTTGCTCCCATGCCCGCCAGCCGTCGCGGCGGCGCGCGAGAGCCTCGTCCGG
GGCGCCTCTATTGCCGTCGAGGACTATGCCACCGACTTCCTGCGCTCGCCGGGCGGCACCTTCGCCTGCGGCTTCTACCG
CGTCTCCTCCACCGTTTTCACCTTCTCCATCTGGTTCACGCGCGCCAAGGAACGCTCCGTCGTCTGGACCGCCGATCGCA
CG------------CGGCCTGTCCACAGCACGGGCTCGCGCCTCACGCTAGATAAGCGCGGTGGCGCGCTCATCCTCACC
GACTACGACGGCGAGCCGGTGTGGAACTCCACCGTGGCCGGCGCTCCGACGGCCTCGCGCGCC--CAGCTCCGCGACACC
GGCAACCTCGTCGTGGAGGACGCCGACGGGAGAGCGCTCTGGCAGAGCTTCCACTTCCCCACGGACACGCTGCTGCCCAC
GCAGCGCCTCACCGCGACGACTCGCCTGGTGTCGTCGCGCGACGACAGGCTGCTCTCCTCCGGCTACTACAGCCTCGGGT
TCAGCGACTACGCCATGCTCTCCCTCTTCTACGACAACGGCAACTTC---TCCAGCATCTACTGGCCCAACCCCTACAAC
AACTACGTCGCCAACAACCGCAGGATCTACAACTTCACCCGCGAGGCCGCCATGGACGCGCTCGGCAACTTCCTCTCGAG
CGACAACGCCAACTTCCAGGCGGCCGACCTCGCCGCCGCCGGTGTCCGGAGGCGGCTCACGCTCGA--CGCCGACGGCAA
CCTCAGGGCGTACAGCCTGGACGCGGCGACGGGGACGTGGGCGGTGTCGTGGATGGCGTTCCGCAACCCCTGCACCATCC
ACGGCGTCTGCGGCGCCAACGCGGTGTGCCTCTACGCGCCGGCGCCTTCGTGCGCCTGCGCGCCGGGGCACGAGCGAACC
GACCCCGGCGACTGGACCA------------------GGGGGTGCCGGCCGACTTTCCGGCAGCGCCAGTGCGGGAAGCC
GACGCGGACGCCGACGAGGCTGATGGCACTGCCGC----ACTCCGACTTCTGGGGCTACGACCTCAACGACGGCGAGATC
ATGCCGTTGGCGGAGTGCGCCAGGAGGTGCCGCACCAACTGCGCATGCGTCGCGTTCCAGCACAAGGCCAACAT---GGA
GTGCTACCTCAAAAGCGTCCTCTTCAACGGCAGGACGTTCCCCGGCTTGCCGGGGACGGTGTACATCAAGGTCCCGGTCG
ACTTCGTCGTCCCGGAGTTCCACGTCCACCAATGGCAAGCGCACGTACACGGCGGCCTTGCCATCCTTGAGGAGAACATC
ACCGGCTGCGGCGACCGCGCCGCTCAGGAGGTCCTCCTCAACGCCTCCGCCTTGTCACACAAGCACGTCGGTGACGCCGC
GGGGAAACCGGTGTGGCCGTACCTGTACGGGTTCCTGTCGGCGCTGCTCGTCGTGGAGGCCGTTGTCATTGGGCTCGGCT
GCCTGCTCTTCTCCAGGAAGGGACTGTTCACGCGGTCTTCCCCGGTGTACCCCATGGACGAAGGCTACAGACTCATCCTC
CTCACCACAAGTTTCCAGAGATACAGCTACGCTGCGATCAAGAAGGCCACGGGGAACTTCGCCGACGAGATCGGCCGCGG
CGGGTCTGGCGTGGTGTACAGGGGCGTTCTCGACGACGGCCGGATCGTGGCCGTCAAGGCGCTGACGACGAGCGTGAGCC
GCTCCCACGGGGAGGAGGAGTTCCAGGCGGAGCTGAGCGTGATCGGCAGGATCTACCACAAGAACCTGGTGAGGATCATC
GGCTGCTGCTCCCAAGGCAAGCACCGCATCCTCGTCTCCGAGTTCATCGAGAACCGCTCGCTCGCCACGATGTTGTTCTT
GGACGAAGACGGCGACGGTGACGGCGGCGATGATCACGACGACGTCCTCGGGTGGAGCCAGCGGTTCCGGATCGCCGTCG
GCGTGGCCAGGGGCCTCGCCTATCTGCACAGCGAGTGCCTCGAGTGGATCATCCACTGCAACATGAAGCCGGAGAACATA
TTGCTGGACCGTGATCTGGAGCCCAAGATCACCGACTTCGGGCTCGCCAAGCTGCTGGACCGCCGCCCCCTCGGGTCCGC
CTCTCGCCTAGTGCGGGAGGCGAACCCGTCGCGGCGGATCAGGGGGACGAGGGGGTACATGGCGCCGGAATGGGTGTCGA
GCCTGGCCATCAGCGACAAGGTCGACGTGTACAGCTTCGGCGTGGTGCTGCTGGAGCTGGTGAAAGGGGTCAGGGTGGCG
GACGGCGACCAGAATACGGACGTCAGGGCCGTGGCCAAGGCTGTGAGCGAAAAGATGCATTCCGGCAGCGTGGATGATCT
TGTGGATGGCCGGCTCGCCGGCGACTTTAACCGCGCGCAGGTGAAGGTGGTGGTTGGTGTTGCCTTGTCGTGCTTGGAGG
AGGACAGGAACCGGCGGCCGAGCATGAGCGCGGTGGTGCAGGCGCTCGTCTCCGTTGAAGATGCGTGAACCCAAAGGTGA
TCTGCGCCCTTCTCC-TTGGAACAGACGACGTCTACTTTATTTATTTTAT--TTTGGCCGATCAGTAATTCGTGTAC---
--------------TCAACACTTTTGCTCACTCTTGGTGATAACCGTATTCTCCG------------AAAACT-------
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>chr4A_4
---TATCTCAAAACCTCTCTGTTGCCTTTTTGTGCTATTTGTCTCGATTTTATTCACCGACGAGCTTCATTTCCTTTTCT
TGATTCAGTTGCTGGCATACCACCTTACTGTTCTCCGTGGATTCGATGTCGACCAGCCAAGGAATCTGGCCAAGAGCGTG
ACTACACAGTAAAGCATACTCAAGGCC----------CGCGCCCACACACACATACAAAGTAAACGAAAT----------
------------TAAGTAAAAGAAGCAAGTGTTTGCC-------------------------------------------
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---------------TCCGGGTTGTGTAGACATTTTA-------CTGTAGCGTAGTTAATTTACTAGTAGATGATGATTA
AGCA-AGATGCCTGAGGTGGTTTCCATTGCATTACACCGTGTTGATTGGTCAACTGATTGCGAAGTATATGTCAGCTATT
TCCTACTGATGACGATCCATTGACTCACTGGGGTTTTGCAAGGTGTCCCAGAACTGAAATTGCGTGCAGCTTTTCCATTG
GCTGTTTATGTA--------------------------ATTGTGTAGTGTCCATACAGTGAGATTATCTAGACCATTTT-
GTCTGGAGAGTCAGCGCTACAGATCATCAAACCAAGAGTTGACTGAAATTAACTTTTGCCAATATAACCACCA---GTGC
ATTATAGTACACTGTTAGCGCAGAACCACGGACAGGACAACTGGACAAGTGGTGTGAAAAGCCAATCTTTGCTCGTCAGC
TTTCTTTGAGCTCAAGCATAAGAGTTGCAGTCAGATTCAACCAAACCGACCGACTAAACTCCTCGTGATGCTTATACAAT
AATCAGTTCACAGCAACGAACCCTCCAGTGCACACTAGTTTATTACACGATGCTTAATTACCTCCCAAGAAATTCCATCT
CATCTTCTTGGATCGCCGTTGATGCATAAAATATAGCTG-TTGACTTGACCTGATTACTACTCCTCCTACATATGAACAG
TGATCTTCACTGACCTGTCCAAATCAGCAACATTCCAGTGATGCTAGTGCTACGATCGATGAGACCCTTCGTCCTGGTGC
TTTTGATCACTGTCTGTGGTTTGAGCTTGTTGATCGCATGTCCGCCAGCCGTCGCGGCGGCGCGCGAGAGCCTCGCCCGG
GGCGCCTCCATCGCCGTCGAGGACTATGCCACCGACTTCCTGCGCTCGCCGGGCGGCACCTTCGCCTGCGGCTTCTACCG
CGTCTCCTCCACCGTTTTCACCTTCTCCGTCTGGTTCACGCGCGCCAAGGAACGCTCCGTCGTCTGGACCGCCGACCGCA
CG------------CGCCCTGTCCACAGCAAGGGCTCGCGCCTCACGCTGGACAAGCGCGGCGGCGCGCTCATCCTCACC
GACTACGACGGCGAGCCGGTCTGGAACTCCACCGTGGCCGGCGCCCCGACGGCCTCGCGCGCC--CGGCTCCGCGACACC
GGCAACCTTGTCGTGGAGGACGCCGACGGGAGGGCGCTGTGGCAGAGTTTCCACTTCCCCACGGACACGCTGCTGCCGAC
GCAGAGCCTCACCGCGACGACGCGCCTGGTGTCGTCGCGCGACGGCAGGCTGCTCTCCTCCGGCTACTACAGCCTCGGGT
TCAGCGACTACGCCATGCTCTCCCTCTTCTACGACAACGGCAACTTC---TCCAGCATCTACTGGCCCAACCCCTACAAC
AACTACGTCGCCAACAACCGCAGGATCTACAATTTCACCCGCGAGGCCGCCATGGACGCGCTCGGCAACTTCCTCTCCAG
CGACAACGCCAACTTCCAGGCGGCCGACTTCGCCGCCGCCGGTGTCCGGAGGAGGCTCACGCTCGA--CGCGGACGGCAA
CCTCAGGGCGTACAGCCTGGACGCGGCGAAGGGGACGTGGGCGGTGTCGTGGATGGCGTTCCGCAACCCCTGCACCATCC
ACGGCGTCTGCGGCGCCAACGCGGTGTGCCTCTACGCGCCGGCGCCTTCCTGCGCCTGCGCGCCGGGGCACGAGCAGACC
GACCCCGGCGACTGGACCA------------------GAGGGTGCCGGCCGACTTTCCGGCAGCACCAGTGCGGGAAGCC
GACGCGGACGCGGACGAAGCTGATGGCACTGCCGC----ACTCCGACTTCTGGGGCTACGACCTCAACGACGGCGAGATC
CTGCCGTTGGCGGCGTGCGCCAGGAGGTGCCGCGCCAACTGCGCATGCGTCGCGTTCCAGCACAAGGCCAACAT---GGA
GTGCTACCTCAAAAGCGTCCTCTTCAACGGCAGGACGTTCCCCGGCTTGCCGGGGACGGTGTGCATCAAGGTCCCGGTCG
ACTTCGTCGTCCCGGAGTTCCACGTCCACCAATGGCAATCGCACGTACACGGCGGCCTTGCCATCCTTGAGGAGAATATC
ACCGTCTGCGGCGACCGCGCCGCTCAAAAGGTCGTCCTCAACGCCACCGCCTTGTCACGCAAGCACGTCGGTGACGCCGC
GGGGAAACCGGTGTGGCCGTACCTGTACGGGTTCCTGTCGGCGCTGCTCGTCGTGGAGGCCCTTGTCATCGGGCTCGGCT
GCCTGCTCTTCTCCAGGAAGGGACTGTTCACGCGGTCCTCTCCGGTGTACCCCATGGACGAAGGCTACAGACTCATCCTC
CTCACCACAAGCTTCCAGAGGTACAGCTACGCGGCGATCAAGAAGGCCACGGGGAACTTCGCCGACGAGATCGGCCGCGG
CGGGTCTGGCGTGGTGTACAGGGGCGTTCTCGAGGACGGCCGGGTCGTGGCCGTCAAGGCGCTGACGACGAGCGTGAGCC
GCTCCCACGGGGAGGAGGAGTTCCAGGCGGAGCTGAGCGTGATCGGCAGGATCTACCACATGAACCTGGTGAGGATCATC
GGCTGCTGCTCCCAAGGCAAGCACCGCATCCTCGTCTCCGAGTTCATCGAGAACGGCTCGCTCGCCACGATGTTGTTCTC
GGACGAAGACGGCGACGGCGACGGCGGCGATGATCACGAC---GTCCTCGCGTGGAGCCAGCGGTTCCGGATCGCCGTCG
GCGTGGCCAGGGGCCTCGCCTATCTGCACAGCGAGTGCCTCGAGTGGATCATCCACTGCGACATGAAGCCGGAGAACATA
CTGCTGGACCGTGATCTGGAGCCCAAGATCACCGACTTCGGGCTCGCCAAGCTGCTGGACCGCCGCCCTGAGGGGTCCGC
CTCTCGCGCAGGGCGGGAGGCGAACCCGTCGGGGCGGATCAGGGGGACGAGGGGGTACATGGCGCCGGAATGGGTGTCGA
GCCTGGCCATCAGCGACAAGGTCGACGTGTACAGCTTCGGCGTCGTGCTGCTGGAGCTGGTGAAAGGGGTCAGGGTGGCG
GACGGCGACCAGAATACGGACGTCAGGGCCGTGGCCAAGGCCGTGGGCGAGAAGATGCATTCCGGCAGCGTGGATGATCT
TGTGGATGGCCGGCTCGCCGGCGACTTTAACCGCGCACAGGTGAAGGTGGTGGTTGGTGTTGCCTTGTCGTGCTTGGAGG
AGGAGAGGAACCGGCGGCCGAGCATGAGCGCGGTGGTGCAGGCGCTCGTCTCCGTTGAAGATGCGTGAACCCAAAGGTGG
TCGATCAGTAATTCCTTTGGAACAGACCACGTTTACTTTATTTATTTTATATTTTGGCCAATCAGTAATTCATGTACGAG
CGCTCTTCATGTACTCAACACTTTTGCTCACTCTTAGTGATAACCGTATCCTCCGAAAACTCCAAACAATACTGTGCTTC
CGAACGTAGTCTTTG-CCCCAAAAGTGCACATCACTTAGC----------------------------------------
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>chr4D_1091
GCGGCCGCGGCAGCCTGCCGCGC---------------------------------------------------------
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GGCGCCTCGCTCGCCGTCGAGGACCACGCGTCCGACCTCCTCGTCTCCCCGGACGGCGCCTTCGCCTGCGGCTTCTACGC
CGTATCCCCCACCGTCTTCACCTTCTCCGTCTGGTTCGCGCGCTCCGCCGACCGCGCCGTCGTCTGGACGGCCGCCGCCA
CCGCCACGGCGCGCCGCGCCGTGCACAGCCAGGGCTCCCGCCTCGCGCTCGACGGCCGCCGCGGCGCGCTCGTCCTCACC
GACTACGACGGAGAGGCCGTCTGGAACTCCACCGC--------CCACAACGGCGCCGCGCGGGCGCGGCTCCGGGACACC
GGCAACCTCGCCGTCGAGGACGCCCG-GGGAGCGTCCTGTGGCAGAGCTTCGACCACCCGACCGACACCCTGCTCCCCGC
CCAGCGCCTCAGCGGCGCCGCCGGGAGCGGCCTCGTGTCCACCAGCAGGCTCCTCGCGGCTGGGCACTACGGCTTCCGGT
TCAGCGACTACGCCATGCTCTCAATGGTGTACGACGATGGTGGCGAGGTATCGACCATCTACTGGCCCAACCCCTACTTC
AGCTACTGGCAGAACAGCCGCAAGATCTACAATTTCAGCCGCGAGGCCGAGTTGGATTCCACGGGCCATTTCTTGGCCAG
CGACAACGCGACGTTCGATGCCGCCGATCTGGGCAGCACCGGGGTCAGGAGGAGGTTGACGCTGGA--CACCGACGGCAA
CCTCCGGCTGTACAGCTTGGACGGCGAGGCA------TGGACCGTGTCGTGGATGGCGTTCTCCAACCCCTGCATCATCC
ACGGCGTGTGCGGCATCAACGCGGTGTGCCTCTACACGCCTTCACCGGCCTGCGTCTGCGCCCCCGGGCACGAGCGC---
---------------GCCGACCGGAGCGACTGGAGCAGGGGCTGCCGGCCGACGTTCAGCAACTCCACCGGCGGCCGCGA
CGAGCAGGTGAAGTTCG------TGGCGCTGCCGC----ACACCGACTTCTGGGGCTTCGACCTCAACAACAGCGAGTAC
CTGTCGCTGGACGCGTGCGAGGCGCAGTGCACCGGCGAGCCGTCGTGCGTGGTGTTCCAGTACAAGCAGGGCAAGGGGGA
GTGCTACCCCAAGAGCCTCATGTTCAACGGCAGGACGTTCCCCGGCCTGCCCGGCACGGCCTACCTCAAGGTCCCAGCCG
ACTTCAACGTGCCGGAGCTGCGCATCCATCAATGGCAGACCGATGAT------GGCCTCGCCATCCAGGAGGGCATTGCC
GGAT------GCGACGCCGCGGCACCGGAGGTCTTGCTCAACGTCTCCGGCACGGCGAAGATGAGCAGCAACCAGGGCAA
GTCGCTATGGTTC------TACTTCTACGGCTTCTTGTCCGCGTTCTTCGTCATCGAGGTGTTTGTGATAGCGTTTGGGT
GCTGGCTCTTCTCCAAGAAAGGGATACTGTCCAGGCCATCGGAGCTGCTGGCCGTGGAGGAAGGGTACAGGATGATCACC
AGCCATTTCCGGGC------GTACAGCTACTCAGAGCTGCAGACGGCCACCAGGAAGTTCCGCGCCGAGATCGGCCGCGG
CGGTTCGGGCACCGTGTACAAGGGGGTCCTGGACGACGACAGGACGGTGGCCGTCAAGGTGCTGCAGGACGTGAGCCAGA
GC---------GAGGAGGTGTTCCAGGCCGAGCTGAGCGCGATCGGCAGGATCTACCACATGAACTTGGTAAGAATGTGG
GGGTTCTGCTCGGAAGGCGCGCACCGGATTCTGGTCTACGAGTACGTCCACAACGGATCATTGGCAAATGTGCTGTTCCA
AGGCACCGGAAATTCCGGCGGGTTGCTG---------------------GGATGGAAGCAGAGGTTCAGCATCGCCGTCG
GCGTGGCCAAAGGACTGGCATATCTTCACAATGAGTGCCTGGAGTGGATCATCCACTGCGACATGAAGCCGGAGAACATA
CTGCTGGATGATGAAATGGAGCCCAAGATCACCGACTTCGGGCTGGCGAAGCTGCT------------------------
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>chr4D_1562
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-------------------------------------------------------------GGCTACTACAGCCTCGGGT
TCAGCGACTACAACTTCT-------------------------------------------CTGCCCCAACCCTTACAAC
AACTAGTATACATCGCAAAAACCGATCTACAATTTCACCCGCGAGGCCGCCATGGACGCGCTCGGCGATTTCCTCTCCAG
CGACAACGCCAACTTCGAGGCGGCTGACCTCGGCGCTGCCGGTGTCTGGCGGAGGCTGACACTCGACGCGCGGACAGCAA
CCTCAGGGCGTACAGCCTGGACG--------------TGGGCGATGTCATGGATGGCGTTCCACAACCCCTGCACTATCC
ACGGCGTGTGCGGCGCCAACGCGGCGTACCTCTATGCGCCGGCGCCTTCGTGCGCCTGCGCGCCGGGGCACGAGCGC---
---------------ACCG------------------GAGGTTGCCGGCCGACTTTCCGGCAGAACGAGTGC-------C
GACGCGCACGCCGACAAAGCTGATGGCGCTGCCGCGCGCACTTCGACTTCTGGGGCTACGACCTCAACGACGGCGAGATA
ATGCCGTTTGCGGCGTGCGCCAAGAGGTGCCGCACCAATTGCGCAGGCGTCGGGTTCC----------------------
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>chr2D_3781
CCTCCC--------------------------------------------------------------------------
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------------------------------------------TCCGGCTGG-ATGGATAGCCCAGACCCTTCCCTTGCCG
TGCCGGTCACCGC---CGAAAACCACCCATGCGACGCCGCACGCACCGAAGAAAACTTTGGGGATGAAAAAAACCCATCG
GGTTCAAGCTTCTCCTCCAACAACGGCAATGGCCGTCGGGTTGGCGGTCGCCTCTCCAGCAACGGCCCGCCGCCCTCCCA
GCGCTCCTGCAGGAGCCAAACGAGCAAGAAAGCCGACGGCGGTGGCGATGGCCCTCGCTGAGGCGGCCGCGAAGAAGAAG
ATGAAGAAGGCCACAATGACGCCTCCTCCAAGGCATCA-CCTTGTGCAACTGCTCCGGCGGGACCTACAACCACTGCTCT
GGCGCGGGCGGCGGCCACAACCTGCAACAAGTTCGCGGCCT--CCAAGTGCTGGATGAAATGCCTACAAGGTAAAAAAAT
CTTCAACATTTTC-------------AGCCGATCGGTGATTGTTGGTAGCGGATGGTGATGTAGTTTCTTTGTTTCCTTG
TCGTAGCGCGGAGATGAACACGACCAAGTTTCTTAGCGTC----------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------
>SNPs
--S----------------------S------------------------------------------------------
----------------------------------------------------------------------------S---
------------SSSSSS-SS-S-S-SSSSSS-SS-----S---------------------------------S--S--
-----------S--------SS----------------------------------------------------------
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---------------------------S------S---------------------------------------------
----S---------------------------------------------------------------------------
SS--------------------------S---------------------------------------------------
---------------------------------------------S---------------------------------S
----------------------------------------------S------------SS-------------------
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-------------S-----------------S------------------------------------------------
-------S------------------------------------------------S--------S--------------
----S------------------------------------------------------------------------S--
-------------------------------------S------------------------------------S-----
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----------------S--------------------------------------------------------------S
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
------S-----------------------S-------------------------------------------------
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--------------------------------------------------------------------------------
------------S------------------------S------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
---------------------------------------------------------------------SS---------
---S-----------------------------------------------------S----------------------
------------------S-------------------------------------------------------------
--------S-----S-----------------------------------------------------------------
---------S-----------------------------------------------------S----------------
--------------------------------------------------------------------------------
--------------S--------------------------------------------------------------S--
-------------------------------------S----S-------------------------------------
-------S-----------------------------------------------------------S------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
-------------------------------------------------------------S------------------
--------------------S--S---------------S------S-------S--------------S----S-----
--------S-----------------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------S-----------------------------------
-----------------S-------------------------S-----------------------------S----S-
-S-----------S-S--------------S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S-------------------S---SS--S
-------SSS-S-SSS------S------SS--S---S--S--SS-S--------SSS----S-----------S--S--
S---------S---------SSS-SS--------SS----S----SSSS-------------S-----S-----S----S
S------S--S-----S--------SS-------S-------S----SS---S---------------------------
----------S--S--S-------SS---SS-S-SSSSS---SS----S--S--------SSS----SSS---S-----S
S---------------S--S--S--------SSSSSS-S-SSS---------S--S---------------------S-S
S--SSS-SSSSSSSSSSSSSSSSSSS----S----------S--S----SS-S-----------------------S---
--S---S------------------S----SS-SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2112
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------------GGAACGGAACCTCCAGTGAG------------------------------------------------
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>reverse_4010
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---------AGTGGTGTACAGGGGCGTTC---------------------------------------------------
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>forward_3929
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---------------------------------------------------------------------GACTCATCCTC
CTCACCACG-----------------------------------------------------------------------
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>reverse_5726
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---------------------------------------------TCAAGGTCACTGTAACGCCC---------------
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------------------------------------------------------------
