>input_sequence_31449
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---------------ATGGGGTGGAAGGCCGCGGAGAAGCTCATCAGGCACTGGAAGATCCTCCGCGGCGACAACGTGCG
CGGCTCCTCCACACCCCGCTCGCTCCTCTTCCCGCTCCCGTTGCGCTCGAGATCTCT----CTGAAATCTCTTCTTCCTT
TTTCTGTCTGATGAAATTGGCGCCAGGTGATGATCATAAGGGGCAAGGACAAGGGGGAGAGCGGGCTGATCAAGCGGGTC
ATCCGGTCGCAGAATCGCGTCATCGTCGAGGGCAAGAATCTGGTAATATATATAATCGCCGGCGCTCTTCCTTCTTCGGT
TTCTCTTATCAGCTATTGCTTAGGATTCGGTGCTACTGTGTGGTGTCATGGGAGTATCGATTTGCGTATCTGTGACTAGC
TGTATGCAATGTGATACGTGCTCCGAGTGCTGCACTACAGGTGTTTGTCGAAATTCCCAGTCCACTGAAAGTGAA-TGGG
CAACTTGGCTAGTGTTGTAA----------------------------------------GTAGCTGCTATGCTGCAGCT
GCACAGATGTTATTTGGTGATTACTGCAACAGAGGATCTTTTTTTTCTCCATTCGATTGTCATGAATGATGAGATAAAAC
GATAGTGCCCAGGAAGAAAATTCCCACTGGGATACCATCTGTATGAATATAAATCTGTAAAGTAAACGAGAATCTAACAC
TTCCCACCACATACCGTGCATCCACCACGACATCAGAATACCATAAGTACGGAACGAGCACATATTACTTGTAGGATACT
TGCCTGCTTGAATCATCATATATATGGAGGTCGGCTTTTTGGTCAAATCTTGGAGAGCTCAAGCAATGCAAGTGCCACTT
AAGGCGTGTTTGAAAGGCTGGAGGT--TAGGCCTAATCCATTAAAATGGTAGGGAAAGGGGACCAAAACAACCCTGCCAA
GATATATTGCAGCGTTGTGCGTGCCTATCTACGTTTGAGCGGTTAGCATAGATTTTTCCCTTTTTGGGCATGTTTGCGTC
TACCAAGTTGTTACTGTGCTATACATACTTATACTACAATGTCCCTCACTCTGTTATATGTTTACTTTTAGTTAATTGTC
AAACTCACAATGAGATGCCTTAAAAAACTGATAATAAGACCATGCAATGTTTTGCTGGATTTGCACATGTCATAAGCCCA
TAACAAACAAACGCGGAATGAATGACTCAGTTAGATAAAAGCAGTTTGATTTGAACATGGTGAGGAAGTGACTGTAGTGA
ATATTGAACAGGAACTGTGAACTGCACAATGCTTGTCTTTCTACAGTTTTGTATATCTACTGTAAGATGTTGCATGTTTA
TGGGGAATACTGGGTAACAGGACAATTGCAACCAGCAAACTTTTACTGTTTATGTGTTTCTCTTGTAATGAAAAATCACT
TAGTAATTTGTATGCTGACATATTTTCAGGTTAAGAAACATATTAAGCAAGGGGAAGGACAAACAGGTGGGATCTTCTCA
ATGGAAGCTCCACTTCATGTTTCAAATGTACAAGTAATTGATCCAGTCACCGGGTATGATACTTTTGGCCATCTTTTTTT
ACCTTTATTCTCTAGAGATACAGTTTTTATTTGTCTACATACTAAAAATATATTTGTCAACATTTTGACTGCAGGAAACC
ATGCAAGACTACATACAAGTATTTGCCAGATGGGACTAAAGTAAGGGTCTCTAGAGGAATGAATGCGTCTGGTGCTGTCA
TACCTCGGCCAGAAATTTTGAAGGAGAGAAAAAAGCCAAGACCCACATCTCGTATGTTCCATAAACAGATCCTTTTTGCT
CATTATTAGTTGCTTTTGAAGTGCATAATTATACTGTTCAGAGAAGAATTAACTGACTTGTTATCCTGCAATTGTTTGTG
AACATCTGAGTTTTTCATGATGCCTGGATTAGAATTGAGCTAACACTAATCTGACCTCCATCTAAAATTAGGAGAGCAAG
CCAATCTCAACTTAATACAACTTATTTTTTCAAGCCAATCTCAACTTCATACAACTTATTTTTTCATAATTTTGTCTCGT
GTTGCTGGAATTTTCTTATTCTTGAGCACTATGTTTTATGTTCCGGATCTGCGATAGTCATGCTACTATAGGTGTTTCTG
TTAATGGTGTTTGGCTTGTTTGCTGCATTCTAC-----------------------------------------------
------------------------------------ATATTAGAAAGACTTCC---------ATAAAATTAGTTAAGCAA
TAAGTAGTAAAAAGCGCAGAATAAATTCTGATGCTTCATGCTGTCCTTGACAACGGTTGGACTGAGGGCAATCTGTGTAT
GGTATGGATAAGAAAAAGAATAAGTAGGTTTAATGTATAACAAACGAAGCGCCATAGGAAATTTCCTGTACTTATGTGCA
GGGGGTATCTACCCACTAGCTGGCATGTGAATGTATTGTGTCGCTATATGAGCATCTGCTCTGCTCTAGGAATACCACGT
CTATTTTGTAATTGGACTGATTTTCTTTGACTGATGCAGATGGCCCAAAGGACACACCAATTGAGCATGTGCTGGAGAAG
ACCTATGATGCCAAAGCTGGAATTGGTATGCCTGATCTAT--GA------------------------------------
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>chr4A_1_TraesCS4A01G186300
AAATCAAACTCAAGTAAATATAGCATGGAGCTAGTTAAGAATCTGACTAGTTACAAGAATAAATTTTTTTGG-ACGTAAT
TCTTCTACGGAGATTAATTTAGTTGTGCAAATGATTGGAGAAAAGCATGTGGGGGCACACTAGAGCGGGATATGCTACGA
TGCCCATAGCAAGTACCAAGTAAAGCGACTGGCCATACATAGAGATTGGATAAAGCAATCGACGCAAAAGGACGCATCCT
TTTCGCCCAGGTTCATGCCACTACGGCCACTGCCCAAGCCGGAGAAACACAACTACGGAAATCGAAGCAGCAAGCCCAAG
CCTTTTACCAGTTGAATCGACGCAGCAACAAGGGGATTTCACGAGGTGTTCGTATCCACGTTCGTCGGCGACTTGGCGCC
TCTGCCGCAGCAAAGAACCAAAATCGCGACCGAATCGGAGGCCGGAAC-AAGCTAGCGCGACGGACTTGCGAGAGAAGAC
GCATGGCAAGAAAGTGGCCGC---------GAGCAATAGACAGATCTTGGCGAGGGGTTCGGCGAGTTTACCTCTCTCTT
GTCAACGGCTGGAATCTGACAGT-----------TGGGGCTGGAGCCGCCGGCGAAGGGGGAGAGGATCAGCTTAGCCCT
AGCTAGAGGAGGAGGAGGAGGAGGAAGAAGAGCTGGGCGAGGTCGCGGCTCATTTAGAGAGCAACTTGCAGTCTAGCCCT
CACTCTTTTCCGCCGTCACACTCTCATCCCTGAGATTTCCCCAGCCGTCCGATCCTGCGCTGACCGAGCCAGCACCGTTG
ATCCGCCTGCCTCCGGAGAGCCACGGGCCTGCCGCCTA--------------GCTACGTGGGCCGACGCTTGGGTCCGGC
TCACACACTTGTCATGCCAGTTTCTGCCGGCCCGCTTTGAGGCCCATCCCAGGTGGTTTTCTTCCTCC------------
---CCCGCGAGCGCCGCCGTCTCTC----TCCATCCATCCACTCTCCCAGCCAAATCGAGCCGAGCCAAGCCGCCGCCTG
AGCTGAGAGGCAGGAATGGGGTGGAAGGCCGCGGAGAAGCTCATCAGGCACTGGAAGATCCTCCGCGGCGACAACGTGCG
CGGCTCCTCCACACCCCGCTCGCTCCTCTTCCCGCTCCCGTTGCGCTCGAGATCTCT----CTGAAATCTCTTCTTCCTT
TTTCTGTCTGATGAAATTGGCGCCAGGTGATGATCATAAGGGGCAAGGACAAGGGGGAGAGCGGGCTGATCAAGCGGGTC
ATCCGGTCGCAGAATCGCGTCATCGTCGAGGGCAAGAATCTGGTAATATATATAATCGCCGGCGCTCTTCCTTCTTCGGT
TTCTCTTATCAGCTATTGCTTAGGATTCGGTGCTACTGTGTGGTGTCATGGGAGTATCGATTTGCGTATCTGTGACTAGC
TGTATGCAATGTGATACGTGCTCCGAGTGCTGCACTACAGGTGTTTGTCGAAATTCCCAGTCCACTGAAAGTGAA-TGGG
CAACTTGGCTAGTGTTGTAA----------------------------------------GTAGCTGCTATGCTGCAGCT
GCACAGATGTTATTTGGTGATTACTGCAACAGAGGATCTTTTTTTTCTCCATTCGATTGTCATGAATGATGAGATAAAAC
GATAGTGCCCAGGAAGAAAATTCCCACTGGGATACCATCTGTATGAATATAAATCTGTAAAGTAAACGAGAATCTAACAC
TTCCCACCACATACCGTGCATCCACCACGACATCAGAATACCATAAGTACGGAACGAGCACATATTACTTGTAGGATACT
TGCCTGCTTGAATCATCATATATATGGAGGTCGGCTTTTTGGTCAAATCTTGGAGAGCTCAAGCAATGCAAGTGCCACTT
AAGGCGTGTTTGAAAGGCTGGAGGT--TAGGCCTAATCCATTAAAATGGTAGGGAAAGGGGACCAAAACAACCCTGCCAA
GATATATTGCAGCGTTGTGCGTGCCTATCTACGTTTGAGCGGTTAGCATAGATTTTTCCCTTTTTGGGCATGTTTGCGTC
TACCAAGTTGTTACTGTGCTATACATACTTATACTACAATGTCCCTCACTCTGTTATATGTTTACTTTTAGTTAATTGTC
AAACTCACAATGAGATGCCTTAAAAAACTGATAATAAGACCATGCAATGTTTTGCTGGATTTGCACATGTCATAAGCCCA
TAACAAACAAACGCGGAATGAATGACTCAGTTAGATAAAAGCAGTTTGATTTGAACATGGTGAGGAAGTGACTGTAGTGA
ATATTGAACAGGAACTGTGAACTGCACAATGCTTGTCTTTCTACAGTTTTGTATATCTACTGTAAGATGTTGCATGTTTA
TGGGGAATACTGGGTAACAGGACAATTGCAACCAGCAAACTTTTACTGTTTATGTGTTTCTCTTGTAATGAAAAATCACT
TAGTAATTTGTATGCTGACATATTTTCAGGTTAAGAAACATATTAAGCAAGGGGAAGGACAAACAGGTGGGATCTTCTCA
ATGGAAGCTCCACTTCATGTTTCAAATGTACAAGTAATTGATCCAGTCACCGGGTATGATACTTTTGGCCATCTTTTTTT
ACCTTTATTCTCTAGAGATACAGTTTTTATTTGTCTACATACTAAAAATATATTTGTCAACATTTTGACTGCAGGAAACC
ATGCAAGACTACATACAAGTATTTGCCAGATGGGACTAAAGTAAGGGTCTCTAGAGGAATGAATGCGTCTGGTGCTGTCA
TACCTCGGCCAGAAATTTTGAAGGAGAGAAAAAAGCCAAGACCCACATCTCGTATGTTCCATAAACAGATCCTTTTTGCT
CATTATTAGTTGCTTTTGAAGTGCATAATTATACTGTTCAGAGAAGAATTAACTGACTTGTTATCCTGCAATTGTTTGTG
AACATCTGAGTTTTTCATGATGCCTGGATTAGAATTGAGCTAACACTAATCTGACCTCCATCTAAAATTAGGAGAGCAAG
CCAATCTCAACTTAATACAACTTATTTTTTCAAGCCAATCTCAACTTCATACAACTTATTTTTTCATAATTTTGTCTCGT
GTTGCTGGAATTTTCTTATTCTTGAGCACTATGTTTTATGTTCCGGATCTGCGATAGTCATGCTACTATAGGTGTTTCTG
TTAATGGTGTTTGGCTTGTTTGCTGCATTCTAC-----------------------------------------------
------------------------------------ATATTAGAAAGACTTCC---------ATAAAATTAGTTAAGCAA
TAAGTAGTAAAAAGCGCAGAATAAATTCTGATGCTTCATGCTGTCCTTGACAACGGTTGGACTGAGGGCAATCTGTGTAT
GGTATGGATAAGAAAAAGAATAAGTAGGTTTAATGTATAACAAACGAAGCGCCATAGGAAATTTCCTGTACTTATGTGCA
GGGGGTATCTACCCACTAGCTGGCATGTGAATGTATTGTGTCGCTATATGAGCATCTGCTCTGCTCTAGGAATACCACGT
CTATTTTGTAATTGGACTGATTTTCTTTGACTGATGCAGATGGCCCAAAGGACACACCAATTGAGCATGTGCTGGAGAAG
ACCTATGATGCCAAAGCTGGAATTGGTATGCCTGATCTATGAGAGAAGACGTCCATTGCTGAGAATGAAAGAGAA--AGA
GTCGGGAATATTTGTGATCTAT--CCATCCTAGTTAAGATAGTAGGAACTCTGCGGTTATTATGTCAGGAAGCACTCAAC
ATTTGTTCACGAATAAAACTAGCCAGCATCTCGTGTGTTTCCAGAAATCTGTCCCTGAAGACCCTGATTGAATGTTGTGC
ATCTTGTTTGCTGTTTGATTGTATGAATGAGGCCCCAAGAAAGTACGGG---CCAGGCTGCTGGTTAACCAAGAACAGTT
CTTGGGTTTTTTACTGTAATTTCTTTGTTTTTCCAGCATGGCTCCTGAAGGTAGCTGAATATGCGAGTGCAAAAAAGGAA
AAATTGCGACAAAGTCTTTCATTTATGCTGTCTGTTTCAGTCGTTGCATTGTGCTGAAACAAATCCTAGCTACTCATCTC
AGGAGTGAGGAGTTCATATTTC---------------ATGGCTATACACTGTCAATGATGAAATCATATACTAGGTCCTA
CTATTAAATTATAGTCATAGAAAGTGCATGGAATTAGACC----TAAGATAACCGTTTGCATCCGCCAACAAGCCAACCT
AAGGCCGTGAGCATCAGATTGCAAAGAAGCTCTGTTAATCGTAACACAAACTCTTAA--------C---AAGTTAACATG
AAAGGAATTCATTTAGTAGCACTGTGAACCCACTCGAAG-AAAATATTCTTCACAACTATTTACAGCCGTGATAAAACAG
--TCTGTATTCATTTCCACAAGAATTTGGACACACATCCACAATCCGCTAGTATGGG-ATATCATTGCGATCTGAAAGAG
GCTTGGTGAGCCAATCATTATCTTCACCATCGTCGTTGATGTTGCTGAGCACATCAAATACTTCTTGTGCTAGAACTAAT
ATGACCTATGCCTGACGATGAACAGAGGTACAACCTCTGCAAAAACAGGA-----GAAGAACAAGGATGAACAGAGAGGG
CAGTGCCAAAAATGAAAGGAGGCGGGGCAAAATGGGTAATAAAGAAAA
>chr4D_1
AAATCAAACTCAAGTAAATATGGCATGGAGCTAGGTAAGAATCTGACTAGTTACAAGAATATATATTTTTTTAACGTAAT
TCTTCTACGGAGATTAATTTAGTTCTGCAAATGATTGGAGAAAAGCATGTGGGGGCACACTACAGCGGGATATGCTACGA
TGCCCATAGCAAGTA-------AAGCGACTGACCATACATACAGATTGGATAAAGCAATCGGCGAAAAAGGAGACATCCT
TTTCGCCGAGGTTCATGCCACTACGGCCTATGCCGAAGCCGGAGAAACACAACTACGGAAACCGAAGCAGAAAGCCCAAG
CCTTTTACCAGTTGAATCGACGCA---ACAGGGGGATTTCACGAGGTGCTCCTAACCACAGTTGTCGGCGACTTGGCACC
TTTGCCGCAGCAAAGAACAAAAATCGCGACCGAATCGGAGCCCGGAAC-AAGCTAGCGCGACGGACTTGCGAGAGAAGAC
GCATGGCAAGAAAGTGGCCGCGAGGAACTGGAGCAATAGACAGATCTCGGT------------GAGTTTACCTTTGTCTT
GTCAGCGACTGGAATCTGGCAGGGGCTGGATCGGTGGGGGTGGAGCGGCCGGCGAAGGGGGAGAAGATCAGCTTAGCCCT
AGCTAGAGGAGGAGGAGGAGGA---AGAAGAGCTGGGCGAGGTCGCGGCTCATTTAGAGAGCAACTTGCAGTCTAGCCCT
CACTCTTTTCCGCCGTCACACTCTCATCCCTGAGATCTCCCGAGCCGTCCGATCCTGCGCTGACCCAGCCAGCACCGTTG
ATCTGCCTGCCTCCGGAGAGCCACGG-------GCCTGCGGGCTGCGGCCTGGCTGCGTGGGCCAACG------------
-------CTTGTCATGCCAGTTTCTGCCGGCCCGCTTTGAGGCCCATCCCAGGTGGTTTTCTTCCTCCGGCCGCCCACCC
TCCCCCGCGAGCGCCGCCGTCTCTC----TCCATCCGTCCACTCTCCCAGCCAAATCGAGCCGAGCCAAGCCGCCGCCTG
AGCTGAGAGGCAGGAATGGGGTGGAAGGCCGCGGAGAAGCTCATCAGGCACTGGAAGATCCTCCGCGGCGACAACGTACG
CGGCATCTCCGTCCCCTCCACACCCG------CGCTCCCGTTGCTCTCGAGAGATCT----CTGAAATCTCTTCTTCCTT
TTCTC-TCTGATGAAATTGGCGCCAGGTGATGATCATAAGGGGCAAGGACAAGGGGGAGAGCGGGCTGATCAAGCGGGTC
ATCCGGTCGCAGAATCGCGTCATCGTCGAGGGCAAGAATCTGGTAATAT-----ATCGCCTGCACTCGTCCTTCCTCGGT
TTCTCTTGTCAGCTGTTGCTTAGGATTCGGTGCTACTGTTTGGTGACGTGGGAGTATCGGTTTGCGTATCTGTGACTGGC
TGTATGCAATGCGATACGTGCTCTGAGTGCTGCACTACAGGTGTTTGTCGAAATTCCCAGTCAGCTGAAAGTGAAATGGG
GAACTTGGCTGCGTTGATTCCGCGTGCTAATTCTTCACGGATACTGCCCAGGCTAGTGTTGTAGCTGCTATGCTGCGCCT
GCACAGATGTTATTTGGTGATTACTGCAACAGAGG----TTTTTTTTCCCATTCGATTGTCATGAATGATGAGATAAAAC
GATAGTGCCCAGGAAGAAAATTCCCACTGGGATACCATCTGTATGAATATAAATCTGTAAAGTAAACGAGAATC------
---CCACCGCATACCGTGCATCCATCATAACATAAGAATACCTGAAGTACGAAACAAGCACATAT-ACTAGTAGGATGTT
TGCCTGAGTGCATCATCATATATATGGAGGTCGGCTTTTTGGTCAAATGTTGGAGAGCTCAAGCAATACAAGTGTCACTT
AAAGCGTGTTTGAAAGGCTGGAGGT--TAGGCCTAATCCATTAAAATGGTAGGGAAAGGGGACCAAAACAACCCTGGCAA
GATCTATTGCAGCGTTGTGTGTGCCTATCTACGTTTGAGCGGTTAGCATAGA-TTTTCCCTTTTTGGGCATGTTTTCGTC
TACCAAGTTGTTACTGTGTTGTACATACGTATACTACAATGTCCCTCACTCTCTTATATGTTTACTTTTAGTTAATTGTC
AAACTCACAATGAGATGCCTTAAAAAACTGATAATAAGACCATGCAATGTTTTGCTGGATTTGTACATGTCCTAAGCCCA
TAACAAACAAATGT----TGAATGACTCAGTTAGATAAAAGCAGCTTGATTTGAACATGGTGAGGAAGTGACTGTAGTGA
ATATTGGACAGGAACCGTGAACTGCACAATGCTTGTCTTTCTACATCTTTGTATATCTACTGTAAGATGTTGCATGTTTA
TGGGGGATACTGGGTAACAGGACAATTGCAACCAGCAAACTTTTACTGTTTATGTGTTTCTCTTATAATGAAAAATCACT
TAGTAATTTGTATGCTGACATATTTTCAGGTTAAGAAACATATTAAGCAAGGGGAAGGACAAACAGGTGGGATCTTCTCA
ATTGAAGCTCCACTTCATGTTTCAAATGTACAAGTAATTGATCCAGTCACCGGGTATGATACTTTTGGCCATCTTTTGAT
ACCGTTATTCTCTAGAGATACAGTTTTTATTTGTCTACATACTAAAAATATATTTGTCAACATTTTGACTGCAGGAAACC
ATGCAAGACTACATACAAGTATTTGCCAGATGGGACTAAAGTAAGGGTCTCTAGAGGAATGTATGCGTCTGGTGCTGTCA
TACCTCGGCCAGAAATTTTGAAGGAGAGAAAAAAGCCGAGACCCACATCTCGTATGTTCCATAAACAGATCCTTTTTCCT
CACTATTAGTTGCTTTTGAAGTGCATAATTATACTGTTCAGAGAAGAATTAACTGACTTGTTATCCTGCAACTGTTTGTG
AAAATCTGAATTTTTCATGATGCCTGGATTATAATTGAGCTAACACTAAAATGACCTCCATCTAAAATTAGGAGAGCAAG
CCGATCTCAACTTA----------------------------------ATACAACTTATTTTTTCATAATTTTGTCTCGT
GTTGCTGGAATTTTCTTGTTCTGGAGCACTATGTTTTATGTTCTGGATCTGCGATAGTCATGCTACTATAGGTGTTTCTG
CTAATGATGTTTGGCTTGTTTGCTGCATTCTAC-----------------------------------------------
------------------------------------ATATTAGAAAGACTTCCACAGGCATGATAAAATTAGTTAAGCAA
TA----GTAAAAAGCGCAGAATAAATTCTGATGCTTCATGCTGTCCTTGACAACAGTTGAACTGAGCGCAATCTGTGTAT
GGTATGGATAAGAAAAAGAATAAGTAGGTTTAATGAATAACAAATGAAGCGCCATA-GAAATTTCCTGTACTTATGTGTA
GGGGGTATTTACCCACAAGCTGGCATGCAAATGTACTGCATCGCTATATGAGCATCTGCTCTGCTCTATGAATACCACGT
CTATTTTGTGATTGGACTAATTTTCGTTGACTGATGCAGATGGCCCAAAGGACACACCAATTGAGCATGTGCTGGAGAAG
ACCTATGATGCCAAAGCTGGAATTGGTATGCCTGATCTAT--GAGGAGACGTCCACTGCTGGGAGTGAAAGAGAGAGAGA
GTTGGGCATATTTGTGATCTATATCCATCCTAGTTACGGCAGTAGGAACTCTGCGGTTATTATGTCAGGAGGCACTCAAC
ATTTGTTCACGAATAAAACTAGCCAGCATCTCCTGTGTTTCCAGAAATCCGTCCCTGAAGACCCTGACTGAATGTTGCGC
ATCTTGTTTGTCGTTTGATTGTATGAATGAGGCCCCAAGAAAGTATGGACAACCAGGCTGCTGGTTCACCAAGAACAGTT
CTTGAGTTTTTACTGTAATATT-----TTTTTCCAGCATGGCTCCTGAAGGTAGCTGGATATGCGAGTGCAAAAAAAGAA
AATTTGCGTCGAAGTCTGTCATTTATGCTGTCTGTTTCAGTCGTTGCATTGTGCTGAAACAAATCCTAGCTACTCATCTC
AGGAGTGAGGAGTTCATATTTC---------------ATGGCTATACACTGTCGATGATGAAATCATATAGGTCCTG---
CTATTAAATTATAGTCATAGAAAGTGCATGGAATTAGACCTAATTAAGATAACCGTTTGCATCCGCCAACAAACCAACCT
AAGGCCGTGAGCATCAGATTGCAAAGAAGCTCTGTTAATCGTAACACAAACTCTTAAACTAACCAC---AAGTAAACATG
AAAGGAATTCATTAAGA----------------------AAAAAAAATCTATGCAG-TATTTACAGCCGTGATAAAACAC
ATTCTGTATTCA-TTCCACAAGAATTTGGACACACCCACAATCCTAGCTAGTATGGTTATATCACTGTGGTCTGAAAGAG
GCTTGGTGAGCCAATCATTGTCTTCACCATCGTCGCCGATGTTGCTGAGCACATCAAATACTTC-TGTGCTAGAACTAAT
CTGGCCTATGCCCGACGAAGAACAGTACAGTAGTAAATAAATCCGACAAAACAGGGAAGAACAAGGATGAACAGA-----
------------------------------------------------
>chr4B_1
AAACCAAACTCAAGTAAATATAGCATGGAGCTAGTTAAGAATCTGACTAGTTAAAAGAATACAATTTTTTTTAACGTAAT
TCTTCTACAGAGATTAATT-AGTTCTGCAAATGATTGGAGAAAAGCATGTCGGGGCACACTACCGCGGGATATGCTAGGA
TGCCCATAGCAAGTA-------AAGCGACTGGCCATACATACAGATTGGATAAAGCAATCGGCGAAAAAGGACACATCCT
TTTCGCCCAGGTTCATGCCACTAGGGCCGCTGCCCAAGCCGGAGAAACA-------------------------CCCAAG
CCTTTTACCAGTTGAATCGACGCA---ACAGGGGGAATTCACGAGGTGCTCCTAACCACAGTT-----------------
---GCCGCAGCAAAGAACC-AAATCGCGACCGAATCGGAGCCCGGAACAAAGCTAGCGCGACGGACTTGCGAGAGAAGAC
GC-------------------GAGGAACTGGAGCAATAGACAGATCTTGGC------------GAGTTTACCTTTGGCTT
GTCAGCGGCGGGAATCTGGCGGGGGCTGGACCGGTGGGGGTGGAGCGGCCGGCGAAGGGGGAGAAGATCAGCTTAGCCCT
AGCTAGAGGAGGA------------AGAAGAGCCGGGCGAGGTCGCGGCTCATTTAGAGAGCAACTTGCAGTCTAGCCCT
CACTCTTTTCCGCCGTCACACTCTCATCCCTGAGATTTGCCGAGCCGTCCGATCCTGCGCTGACCGAGCGAGCACCGTTG
ATCTGCCTGCCTCCGGAGAGCCACGG-------GCCTA--------------GCTACGTGGGCCAACGCTTGGGTCCGGT
TGTCA-------------------TGCCGGCCCGCTTTGAGGCCCATCCCAGGTGGTTTTCTTCCTCCGGCCGCCCACCC
TCTCCCGCGAGCGCCGCCGTCTCTCTCCATCCATCCATCCACTCTCCCAGCCAAATCGAGCCGAGCCAAGCCGCCGCCTG
AGCTGAGAGGCAGGAATGGGGTGGAAGGCCGCGGAGAAGCTCATCAGGCACTGGAAGATCCTCCGCGGCGACAACGTGCG
CGGCATCTCCGTCCCCTCCACACCCCCGCTA--GCTCCGGTTGCTCTCGGGAGATCTCTGACTGAAATCTCTTCTTCCTT
TTTCTCTGTGATGAAATTGGCGCCAGGTGATGATCATAAGGGGCAAGGACAAGGGGGAGAGCGGGCTGATCAAGCGGGTC
ATCCGGTCGCAGAATCGCGTCATCGTCGAGGGCAAGAATCTGGTAATATAATCGTA----TGCACTCTTCCTTGCTCGCT
TTCTCTTGTCAGCTATTGCTTAGGATTCGGTGCTACTGTTTGGTGTCATGGGAGTATCAATTTGCGTATCTGTGACTAGC
TGTATGCAATGTGATACGTGCTCTCAGTGCTGCACTACAGGTGTTTGTCGAAATTCCCAGTCCACTGAAAGTGAA-TGGG
CAACCTGGCTGCGTTAATTCCGCGTGCTAATTCTTCAGGGATACTGCCCAGGCTAGT-TTGTAGCTGCTATGCTGCGCCT
GCACAGATGTTATTTGGTGATTACTGCAACAGAGGAT---TTTTTTTCCCCTTCAGTTATCATGGATGATGAGATTAAAC
AATGGTGCCCAGGAGGAAAATTCCCACTGGGATATCATCTGTAAGAATATAAATCTGTAAAGTAAATGAGAATCTAACTC
TTCCCACCGCATACCGTGCATCCATCATAACATAAGAATACCTGAAATACGAAACGAGCACATAT-ACTAGTAGGATGTT
TGCCTGAGTGCATCATTATATATATGGAGGTCGGCTTTTTGGTCAAATCTTGGAGAGCTCAAGCAATACAAGTGTCACTT
AAGGCGTGTTTGAAAGGCTGGAGGTGTTAGGCCTAATCCATTAAAATGGTAGGGAAAGGGGACCAAAACAACCCTGGCAG
GATCTGTTGCAGCGTTGTGCGTGTCTATCTGCGTTTGAGCGGTTAGCATA------TCCCGTTTTGGGTATGTCTGCGTC
TACCAAGTCGTTACTGTGCTATACATACTTATACTACAATGTCCCTCACTCTGTTGTTTGTTTACTTTTAGTTAATTGTC
AAACTCACAATGAGATGCCTTAAAAAACTGATAATAAGACCATGCAATGGTTTGCTGGATTTGTACATGTCCTAAGCCCA
TAACAAACAAATGC----TGAATGACTCAGTTGGATAAAAGCAGCTTGATTTGAACATGGTGAGGAAGTGACTGTAGTGA
ATATTGAACAGGAACTGTGAACTGCACAATGTTTGTCTTTCTACATCTTTGTATATCTACTGTAAGATGTTGCATGTTTA
TGGGGGATACTGGGTAACAGGACAATTGCAAC---------------GTTTATGTGTTTCTCTTGTAATGAAAAATCACT
TAGTAATTTGTATGCTGACATATTTTCAGGTTAAGAAACATATTAAGCAAGGGGAAGGACAAACAGGCGGGATCTTCTCA
ATTGAAGCTCCACTTCATGTTTCAAATGTACAAGTAATTGATCCAGTCACCGGGTATGATACTTTTGGCCATCTTTTGAT
ACCGTTATTCTCTAGAGATACAGTTTTTATTTGTCTACATACTAAAAATATATTTGTCAACATTCTGACTGCAGGAAACC
ATGCAAGACTACATACAAGTATTTGCCAGATGGGACGAAAGTAAGGGTCTCTAGAGGAATGTATGCGTCTGGTGCTGTCA
TACCTCGGCCAGAAATTTTGAAGGAGAGAAAAAAACCGAGACCCACATCTCGTATGTTCCGTAAACAGATCCTTTTTGCT
CATTATTAGTTGCTTTTGAAGTGCATAATTATACTGTTCAGAGAAGAATTAACTGGCTTGTTATCCTGCAATTGTTTGTG
AACATCTGATTTTTTCATGATGCCTGGATTATAATTGAGCTAACACTAATCTGACCTCCATCTAAAATTAGGAGAGCAAG
CCAATCTCAACTTAATACAACTTATTTTTT--------------------------------TTCATAATTTTGTCTCGT
GTTGCTGCAT-------------------------------------TCTGCGATAGTCATGCTACTATAGGTGTTTCTG
CTAATGATGTTTGGCTTGTTTGCTGCATTCTACTCCCTCCGTCCCATAATATAAGAATGTTTTTGACATTAGTGTAGTGT
CATAAACGTTCTTATATTATGGGACGGAGGGAGTACATATTAGAAAGACTTTCACAGGCATGATAAAATTAGTTAAGCAA
TA----GTAAAATGCGCAGAATAAATTCTGATGCTTCATGCTGTCCTTGACAACGGTTGGACTGAGGGCAATCTGTGTAT
GGTATGGATAAGAGAAAGAATAAGTAGGTTTAATGAATAACAAACGAAGCGCCATA-GAAATTTCCTGTACTTATGTGTA
GGGGGGATCTACCCACTAGCTGGCATGCAAATGAATTGCGTCGCTATATGAGCATCTGCTCTGCTCTATGAATACCACGT
CTATTTTGTAATTGGACTAATTTTCTTTGACTGATGCAGATGGCCCAAAGGACACACCAATTGAGCATGTGCTGGAGAAG
ACCTATGATGCCAAAGCTGGAATTGGTATGCCTGATCTATGAGAGGAGACGTCCACTGCTGGGAGTGAAAGAGAA--AGG
GTTGGGCATATTTGTGATCTAT--CCATCCTAGTTAAGATAGTAGGAACTCTGTGGTTATTATGTCAGGAGGCACTCAAC
ATTTGTTCACGAATAAAACTAGCCAGCATCTCCTGCGTTTCCAGAAATCTGTCCCTGAAGACCCT--CTGAATGTTGTGC
ATCTTGTTTGTCGTTTGATTGTATGAATGAGGCCCCAAGAAAGTACGG---ACCAGGCTGCTGGTTCACCAAGAACAGTT
CTTGAGTTTT--ACTGTAATTTCCTTGCA-TTCCAGCATGTGTTCTGAAGTTAACTGAATGTGCGAGAGCAAAAAAAGT-
-------GAGAAAGTCTATCATTTGTGACGTCTGTTTCAGTTGTTGCATTGTGCTGAAACAAATCCCAGCTACTCATCAC
AGGAGTGAGGAGTTTATATTTCTCTATGGAAGGTAGAATGGCTATACACTGTCAATGATGAAATCATCCAGGTCCT----
--ATGAAATTATGGTCATTGAAAGTACATCGACTTATATTCGCAAAAAAAAAGTACACAGAATTAGACCTAAGA-----T
AAGGCCGTGAGCATCAGATTGCAAAGAAGCTCTGTTAATCATAACACAAACTCTTAA--------CCGTAAGTAAACATG
AAAGGAATGCATTTAGTAGCACTCTGAACCCACTTGAAGAAAAAAATTCTATGCATATATTTACAGCCGTGATAAAACAC
AGTATGTATTCATTTCCACAAGAATTTGGACACACATCCACAATCC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
>SNPs
-------------------------------------------------------------S--------SS--------
------------------------S-------------------------------------S-----------------
---------------SSSSSSS-------------------S-------------------S--S--------S------
----------------------------S--------------------------------S--------S---------
------------------------SSS---S-----------------S--S--S----SS-S--------------S--
-S--------------------------------------S---------------------------------------
---------------------------------------------------SSSSSSSSSSSS----------S-S----
----S-------------S---S----------------S------S-----------------S---------------
----------------------SSS-------------------------------------------------------
-----------------------------------------S--------------------------------------
---S----------------------SSSSSSS-------------------------------S--------------S
-SS--SS-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----SS----SSS---SS-S-S-S--SSS-SS------------S-------SS--------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------SSSS------S--S----------S-----
-------S-------------------------------S----------------------------------------
-----------------------S--------------------------------------------------------
----------SSSS-SS-SS--------------------------------------------------------SS--
-------------------------------------SS-------SS--------------------------------
------------------------------------------------------------------------------S-
--------S---------------S--SS----S--------SS-------S-------------S---S-------SS-
------SS--S--------------------------------------------------------S------S-----
----------------------------------------------------------------------------S---
---S------------------------------------------------S---------------------------
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--SSSS--------------------------------------------------------------------------
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S--S--------S-----S------SSSSSS-SSSSS-SS-SSSSSSSS--------------------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_600
--------------------------------------------------------------------------------
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--------------------TGGAATCTGACAGTTGGGGC----------------------------------------
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>reverse_1759
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------------------------------------------------------------------------------AC
TTCCCACCACATACCGTG--------------------------------------------------------------
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>forward_1536
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------TGGG
CAACTTGGCTAGTGTT----------------------------------------------------------------
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>reverse_2782
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-------------------------------------------------------------AATGCGTCTGGTGCTGTCA
T-------------------------------------------------------------------------------
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>forward_1785
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-----ACCACATACCGTGCATCCAC-------------------------------------------------------
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>reverse_3207
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------GTGTTTGGCTTGTTTGCTGC------------------------------------------------------
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>forward_1788
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--------ACATACCGTGCATCCACCAC----------------------------------------------------
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>reverse_3726
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---------------------------------------------AAGACGTCCATTGCTGAGAA---------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------
