>input_sequence_31428
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-------------------------------------------------------------ATGGCCGAGCCTCCCGCCG
CCGCCTGCCCCACCGAGCTGGAGCTCGCGCGGGCGCGGTGCCGCGCGCTGCACGATCGCCTCGCCGCGTCGCCGTCCCTA
CCGCGCCACCCCGCTCTGCGCTCCCTCCTCCGCCTCGTCGCCGCCGAGCTGCGCTTCCTTGCCTCGAGTAACCACCCCGA
CCCCGCCAGGCCGCTCTCCTCCAACCTGCCCCACCTCGGGGCGCTCCACCTCCTCCTCACCCACCCCGCCGTGCGCTCGC
CGTCCCGCCTCTCGCCCCTACCGGGCGTGGACTTCGCCTGCGCCTTCCGCTCCCGCCCCGCGTGGGTGCTCCTTTCCGCG
CGCAACCCTTCAGGCTTCCAGTGGGTCCCGCGCAAGGGCATCAGCTCCCGCGTCGCTGCCGTGCTGGATGCCGCGCGCTC
CGCTCCGCCGGCAACCCGCCCCGAGAAGCTGCTACTGGCCTTCGCCCGTGGCGTCGGCGCGGACATCGTGTTGGGGCTCG
CCGAGGAGTTCGGGGCCGTAGATATCGACTTGCTAGCGGAATTCATTGGCGATTCCGAGGACGACAAGGAGGAGGACGGC
TGGGTTACCGTCAGCTTCCACCCCAATGAGGAGATGAGGCGCTTTAGGGCGTTCGAGATTGAAGTGGTGGATGGTGATGC
TGAAGTGTTGTTACCGCCACCGCGCAGAGACGTAGAGGAGGTGGAGGAGGGCAGCGGTGACCAATTGGAGGGTTGTTG--
-GTTTGCTGACTTCATGGGGAAGATGAGGATGAACTCCATTGAGATGGTGAATCTAGACACAACGGCTCTTATTGCGATA
GTATCAGGTATCAGCAATGGCGGGGTGGGGAAGCTGATGGGTGCGCCGGTGGCGGAGACCAGGGCCAGGTTCAAGTGCAA
CTACAAGTTCGTCATGGATCAGG---TTTGTAAACATTTGATTCTCAACCTAGAAGAGTA--TTCATAAATAATCTAGTT
CATCTAGTTACAATTGACTTCGAGTTTCTAATGTTGTTTGATAGATTTTGACTGTAAATATCGACAATATTAAAGTGCAT
ATACTAC---------------------AACATATTGCTATAGTCCACAGAACATGATAAGCACAATTCAGAAGTAGTAC
ATAGTATC---TATTGCAATGAGTGAAACCTGTTTATTGGAAAACACAAGTAGAGGACTAT-GTGCCAACAGGAGCTGTA
AATCTTGTTTGAAACTTAATAGGG----TGTATTCATACTTTCTTTTAGGCGCAATCCGAGCTCCAGTCTCCAATATTTG
TTGAGCTGGGGAAAGCAGTGGACGGAAAGAAATGTATCATATGTGAAGCGGTTAAGTCAGAGTTCAACGAAATTGTTTCA
ATGTGTGGTGGGCCAGAGGAGAAAACAAGAGCAAGTCAATTACTGAAACAACTTATGTG---------------------
----------------AGTTTTCCTATACAACTTTGTTTCTGTGAGTTATGCGGCCATAACACCTTTATATTTAGTAATT
CTAATGGGCCTTTAATTCTCCAGCATCAACTCTAGTTTTCAATGTTTATTACATGACCTGCCTTTATCTGGTCAAGTTCA
TGTAACGACCTACATTTGGGATCAGAGGGAGTATTAGATAACACTAATGGCCCTTTATGTGTCTAGTATCAACTCTAGTT
TTCAGTTTTGATTCCATAGTCTGCCTTTGT-TTTGCAGCAGATTTACTCCGTAGTTTCTTTCTGCTTCTAATTTTGCAGT
CATTTTCCCTTCTTATTT--------------------------------------------------------------
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------------------------TTACTTCACTTCACGTAAAGGGGATTTACTCCAATCTATTTGTATCAAATATTTTG
GTGTCGACAAGCTTGCTTCTTAAATTGTTTTCTTGGTTGTTGACTAGGCCCTTTCTTTTCATACCTTTACTTGTATTTCT
GTGTCACTATATGTAAGCTAGAGAGCAATATATTGGGAGATAAATGAGATTGTG-A-ACCCTACATTATCAGACTGGTAT
---TTCCATTCTCCATTTCAATCCCGTCATTGTGCTGTGGTACTGGAAGAAGGATA----CAGTGTGTTCACCCTTTTAT
CTCATGATGGTCATTTGACTCATTTCACCTTGCTGACTGTT-AGTATTCATGTAGCTTTAGGTTGGTATTCTTGTCTCAT
TGTTGGCTTATTGATCAACTAAGCTTTCTCTTTGGTCGC---ACAAATATGCAGCCATACATATAGCATTATCTTGCTAA
ACTAGAAAATTGTATTTG-------TCTCTGTTTATCGTTTATTGTCATGTACAGTAATTTTATGCATGTGAATAGTCTT
GAATTCTGTTTGTCCCGGTCAGTCATCTACCGCATACTTAGCAAGTGCTTTTGGACCTGCAGAATTGTGCCAGACAGTCC
TTCAGTACGTATGATGGATCTTCCAACAACAAGGAAGCTTGCCATGAAGAACAAGGTTGTTTTTGGTACAGGTGACCACT
GGCGTGCTCCCACTTTGACTGCTAACATGGGGTTCGTAAGAGCTGTTTC--AGTCTGGTATGCCTTTGTTGACCATCGAG
CACAGACCTCGTGCCCTGATCGGCTTGTGAAGGCAGATAACCCCATAGTTTAA---------------------------
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>chr1B_1_TraesCS1B01G183700
GAACAGAGGAACCCTAAACTTCCTCTTGTGTGGTCTGTGGTGTGAGCCAAACCTTGCACGCATTTTGGCAAGTAGTTCTA
GCCTAGGAGGTTCCAAACTCCTGGTTAACACCCACTAAATATGATAA---------GTGCCCAAGTTCTATTGGTACCAA
ATTTTGCGACGGCTTGCGAGGTTAACCAGAGGATAGAAAAATCTGGGCATATCCACTACGAACTACA-------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------ACTTTATCAGGCA
AAAACATCACTAGACGAACAACCAGAGCTGAACAAT-AGAGAGAGAAAATATCAACAACTACCTGTTGCTCCCCCAGAGT
AAGATTCAAAAGTTAGACAGGGAAATTTAGCGTAGCATTCCAATTTTAAACGGAATCTGACAAATACCACAAACCCTAGG
CGTTTCTCCACGGCGCGTCACAGCATAGCCTGAGCAGTGGCCGGACTAATCACCGCGCGACTCCGGCCACCACAAGGCAT
GGCGCTC-----GCAAAACATACCACCCCGCAGAACGCACGGAACATAAACGACGGGACACACCGAATCGACGAGACGAA
GCACACATGGATGGTGGCGGCACCAAATCGGTATGCGCGAAACCAAGGAGAGGG-GTAGATCCAGAGAAACGTACCGGCG
AACCGAGATCCGGAAGCCCGTGCGGTCTCGGATCTAGCGAGGTACGGCTCTTCGGGCGGGCGAGCTCGCCGTGGGAGCGG
CCGGCGGCGGCGGGAGTTCGTCGTTTGGGGGGTGGGAATTGGACTATTGGAGAAGAG-GGGGAAGCGGCCGAAAGAGACC
AAATGCCAGTG--CGG-TTCAAAATAACCCGAGCCCAACGGTTACATTCCTGGCCTTTTTATACGCCAGAACGGACGGCT
CTTTTGGGCCAGTCGGCAACTAGGTCCAAGGCCTCCGCCGCAACTGGGCCGGCCCGCCTCGACCCACGCCTGGTTCTTCC
CCAACTCGACGCGAATCCGGCCGGCTCCTG-TTCCTGGAGCAGAGGAGCGACGCAGCGAAAATGGCCGAGCCTCCCGCCG
CCGCCTGCCCCACCGAGCTGGAGCTCGCGCGGGCGCGGTGCCGCGCGCTGCACGATCGCCTCGCCGCGTCGCCGTCCCTA
CCGCGCCACCCCGCTCTGCGCTCCCTCCTCCGCCTCGTCGCCGCCGAGCTGCGCTTCCTTGCCTCGAGTAACCACCCCGA
CCCCGCCAGGCCGCTCTCCTCCAACCTGCCCCACCTCGGGGCGCTCCACCTCCTCCTCACCCACCCCGCCGTGCGCTCGC
CGTCCCGCCTCTCGCCCCTACCGGGCGTGGACTTCGCCTGCGCCTTCCGCTCCCGCCCCGCGTGGGTGCTCCTTTCCGCG
CGCAACCCTTCAGGCTTCCAGTGGGTCCCGCGCAAGGGCATCAGCTCCCGCGTCGCTGCCGTGCTGGATGCCGCGCGCTC
CGCTCCGCCGGCAACCCGCCCCGAGAAGCTGCTACTGGCCTTCGCCCGTGGCGTCGGCGCGGACATCGTGTTGGGGCTCG
CCGAGGAGTTCGGGGCCGTAGATATCGACTTGCTAGCGGAATTCATTGGCGATTCCGAGGACGACAAGGAGGAGGACGGC
TGGGTTACCGTCAGCTTCCACCCCAATGAGGAGATGAGGCGCTTTAGGGCGTTCGAGATTGAAGTGGTGGATGGTGATGC
TGAAGTGTTGTTACCGCCACCGCGCAGAGACGTAGAGGAGGTGGAGGAGGGCAGCGGTGACCAATTGGAGGGTTGTTG--
-GTTTGCTGACTTCATGGGGAAGATGAGGATGAACTCCATTGAGATGGTGAATCTAGACACAACGGCTCTTATTGCGATA
GTATCAGGTATCAGCAATGGCGGGGTGGGGAAGCTGATGGGTGCGCCGGTGGCGGAGACCAGGGCCAGGTTCAAGTGCAA
CTACAAGTTCGTCATGGATCAGG---TTTGTAAACATTTGATTCTCAACCTAGAAGAGTA--TTCATAAATAATCTAGTT
CATCTAGTTACAATTGACTTCGAGTTTCTAATGTTGTTTGATAGATTTTGACTGTAAATATCGACAATATTAAAGTGCAT
ATACTAC---------------------AACATATTGCTATAGTCCACAGAACATGATAAGCACAATTCAGAAGTAGTAC
ATAGTATC---TATTGCAATGAGTGAAACCTGTTTATTGGAAAACACAAGTAGAGGACTAT-GTGCCAACAGGAGCTGTA
AATCTTGTTTGAAACTTAATAGGG----TGTATTCATACTTTCTTTTAGGCGCAATCCGAGCTCCAGTCTCCAATATTTG
TTGAGCTGGGGAAAGCAGTGGACGGAAAGAAATGTATCATATGTGAAGCGGTTAAGTCAGAGTTCAACGAAATTGTTTCA
ATGTGTGGTGGGCCAGAGGAGAAAACAAGAGCAAGTCAATTACTGAAACAACTTATGTG---------------------
----------------AGTTTTCCTATACAACTTTGTTTCTGTGAGTTATGCGGCCATAACACCTTTATATTTAGTAATT
CTAATGGGCCTTTAATTCTCCAGCATCAACTCTAGTTTTCAATGTTTATTACATGACCTGCCTTTATCTGGTCAAGTTCA
TGTAACGACCTACATTTGGGATCAGAGGGAGTATTAGATAACACTAATGGCCCTTTATGTGTCTAGTATCAACTCTAGTT
TTCAGTTTTGATTCCATAGTCTGCCTTTGT-TTTGCAGCAGATTTACTCCGTAGTTTCTTTCTGCTTCTAATTTTGCAGT
CATTTTCCCTTCTTATTT--------------------------------------------------------------
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------------------------TTACTTCACTTCACGTAAAGGGGATTTACTCCAATCTATTTGTATCAAATATTTTG
GTGTCGACAAGCTTGCTTCTTAAATTGTTTTCTTGGTTGTTGACTAGGCCCTTTCTTTTCATACCTTTACTTGTATTTCT
GTGTCACTATATGTAAGCTAGAGAGCAATATATTGGGAGATAAATGAGATTGTG-A-ACCCTACATTATCAGACTGGTAT
---TTCCATTCTCCATTTCAATCCCGTCATTGTGCTGTGGTACTGGAAGAAGGATA----CAGTGTGTTCACCCTTTTAT
CTCATGATGGTCATTTGACTCATTTCACCTTGCTGACTGTT-AGTATTCATGTAGCTTTAGGTTGGTATTCTTGTCTCAT
TGTTGGCTTATTGATCAACTAAGCTTTCTCTTTGGTCGC---ACAAATATGCAGCCATACATATAGCATTATCTTGCTAA
ACTAGAAAATTGTATTTG-------TCTCTGTTTATCGTTTATTGTCATGTACAGTAATTTTATGCATGTGAATAGTCTT
GAATTCTGTTTGTCCCGGTCAGTCATCTACCGCATACTTAGCAAGTGCTTTTGGACCTGCAGAATTGTGCCAGACAGTCC
TTCAGTACGTATGATGGATCTTCCAACAACAAGGAAGCTTGCCATGAAGAACAAGGTTGTTTTTGGTACAGGTGACCACT
GGCGTGCTCCCACTTTGACTGCTAACATGGGGTTCGTAAGAGCTGTTTC--AGTCTGGTATGCCTTTGTTGACCATCGAG
CACAGACCTCGTGCCCTGATCGGCTTGTGAAGGCAGATAACCCCATAGTTTAAGTATTCCAAACTGAATGTAAGAGTCCT
GAAGTTGTAACCAGC--GTGTGTTGTAGTCATAGTTCAGTCGATCCTTATATTTTAGAAACGGCAGATAACAAGACATAA
TGGATATC------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------TCATGTCTCTGTACAT
AAGATTGTACTACTAGCTACTGCCTCTGTACTGAAATATATGTCGCTGGAGTAGCTGTGGTTCAACTACTCTAGCGACAT
ATATTTCAGTACGGAGGGAGTAGTAGAATTGATAGGCTGAAACAGTGCTGTGTGTATATTA----CTTTAGTTTGCTGGT
T----------------------------------------------TGGAGAGGTTTGAAGGGGTCGAGGGGGGTTAAA
TTCCTTGCAAGTCAAAGTCCCCCTCAATCCTACGTGCATTAAACCGAACAAGGCTTAAACAATCTTA-CGCTAGTTTCCA
CGTGGATGCTGGGTCCGGCGCCTGTGGC-AGGGCGTTCGTTGCGGCCTGCGGCCTCGAACTGCTGTGGAACATGCTATGG
ATGTGCCCCGGCCATGGAGGCATTTGCCTATTGATGAAGGGGCTCGAGCTTGCGAATAATCTGTATTTTTCTCTCTTGTG
ATCGAATGTGATTCAACAGACATCGTGCAAACAATCTTGAACCCCTCAGGTTACTGTGCGAC---AGGA---GCTGTGGT
TACCGACGAGTGCCAGCAGCTTGAGCCTGTTCGGCAAGGCGACAATCAAGCATTGTGTCCCGGAAGTAAATGGAGTCACA
CATGAGCTTGATTGTCGCTTGAAAAACGTTCTTA----------------------------------------------
-----------------------------TATTATGGGACAGAGGGAGTACGTAATAGACAATTTGTTTAATTATA--AG
TAAACGACCAAGTT---AAAAAGAACAAGACCTCTAGAACAAGACGC---------------------------------
---------------------------------------------------------------------------AACTG
TTGCCTGGATTTAGTACTCCCTCCATATAGACATGTTTTGGTGTTTTTTGGTATGCATGTAGTCCA--------------
GAACATCTTAGGAATATTTGTAAATAGAGGGAGTAGCTGATATACACAACATCAACAAAACGTCAGCTGCCCCTCACCCC
GTTCAATGTCA
>chr1D_5
AGG----GGAACCCTAAACTTCCCCTTCTGTGGTCTGTGGGGTGAGCCAAACCTTGCACGCATTCTGGCAAGTAGTTCTA
GCCTAGGAGGTTCCAAACTCCTGGTTAACACCCAACAAATATGATAATTGCAAGTAGTGCCCAAGTTCTATTGGTACCAA
ATTTTGCGATGGCTTGCGAGGTTAGCCACAGGATAGAAAAATATGTGCATATCTGCTACGAACTACTTCCTCCGTTCCTA
AATGTAAGTCTTTGGAGAGATTTCACTATGAACCATATACGGAGCAAAATGAATGAATCTACACTCTAAAATGCATCTAT
ATACATCCGTATGTGGTCCATAGTGAAATCTCTACAAAGACCTATATTTAGGAACGGAGGGAGTACTACTTTATCAGACA
AAAACATCACTAGACGAACAACCAGAGCTGAACAAT-AGAGAGAGAAAATATCAACAACTACCTGTTGCTCCCCCAGAGT
AAGATTCAAAAGTTAGACAGGGAAATTTTGCGCAGCACTCCAATTTTAAACAGAATCTGACAAATACCACAAACCCTAGG
CGTTTCTCCACGGCTCGTGACAGCATAGCCTGAGCAATGGCCGGACGAATCACCGCGCGACTCCGGCCACCACAAGGCAT
GGGCGCTCGGATGCAAAACATACCACCCCGCAGAACGCACGAAACAGAAACGACGGGATACACCGAATCGACGAGACGAA
GCACACATCGACAGTGGCGGCACCAAATCGGGATGTGCGAAACCAAGGAGAGGG-GTAGATCTAGAGAAACGTACCGGCG
AACCGAGATCCGGAAGCCCGTGCGGTCTCGGATCTAGCGAGGTACGGCGCTTCGGGCGGGCTAGCTCGCCGTGGGAGCGG
CCGGCGGCGGCGGGAGTTCGTCGTTTGGGGGGTGGGAATTGGAGA----------AGAGGGGAGGCGGCCGAAAGAGACC
AAATGCCACGGCACGG-TTCAAAATGACCCCAGCCCAACGGTTACATTTCTGGCCTTCTTATACGTCAAACCGGACGACT
CTTTTGGGCCAGTCGGCAACTAGGTCCAAGGCCTCCTCCGCAACTGGGCCGGCCCGCCTCGACCCACGCCAGGTTCTTCC
CCAACTCGACGCGAATCCGGCCGGCTCCTGGTTCCTGGAGCAGAGGAGCGGCGCAGCGAAAATGGCCGAGCCTCCCGCCG
CCGCCTGCCCCACCGAGCTGGAGCTCGCGCGGGCGCAGTGCCGCTCTCTGCACGATCGCCTCGCCGCGTCGCCGTCCCTG
CCGCGCAACCCCGCTCTGCGCTCCCTCCTCCGCCTCGTCGCCGCCGAGCTGCGCTTCCTTGCCTCGAGTAGCCACCCCGA
CCCCGCCAGGCCGCTCTCCTCCAACCTGCCCCACCTCGGGGCGCTCCACCTCCTCCTCACCCACCCCGCCGTGCGCTCGC
CCTCCCGCCTCTCGCCCCTCCCGGGCGTGGACTTCGCCTGCGCCTTCCGCTCCCGCCCCGCGTGGGTGCTCCTCTCCGCG
CGCAACCCTTCAGGCTTCCAGTGGGTACCGCGCAAGGGCATCAGCTCCCGCGTCGCCGCCGTGCTGGATGCCGCGCGCTC
CGCTCCGCCGGCAACCCACCCCGAGAAGCTGCTACTCGCCTTCGCCCGTGGCGTCAGCGCGGACATCGTGTTGGGGCTCG
CCGATGAGTTCGGGGCCGTGGAGGTCGACTTGCTAGCGGAATTCGTTGGCGAGTCCGAGGACGTCGAGGAGGAGGATGGC
TGGGTTAGCGTCAGCTTCCACCCCAATGAGGAGATGAGGAGCTTCAGGGCGTTCGAGATTGAAGTGCTGGATGGCGGTGG
TGAAGTGTTGTTACCGCCACCGTGCCGCGGCGTGGAGGAGGTGGAGGAGGGGAGCGGTGACCAATTGGGGGGTT---G--
-GTTTGCTGACTTCATGGGGAAGATGAGGATGAACTCCATGGAGATGGTGAATCTAGACACAACTGCTCTTATTGCGATA
GTATCAGGTATCAGCAATGGAGGGGTGGGGAAGCTGATGGGTGCACCAGAGGCGGAGAGCAGGGCCAGGTTCAAGTGCAA
CTACAAGTTCGTCATGGATCAGGTGCTTTGGGAATATTTGATTTTCAACCTAGAAGAGTGTGTTCATAAATAATCTAGTT
CATCTAGTTA--ATTGACTTCGAGTTTCTAATGCTGTTTGATAAATCTTGAATGTATATATCGACAATATTAAAGTTCAA
ACTATTACATATTTACAAATTTCTACAAAATATGTTTATATAGTCCAAGAAACATGATAAATCAGAATTC--AGAAGAAC
ATATTATC---CATTGCCATCAGTGAAACCTGTTTTCTC-AAAACACAAGTAGAGGACTATGTTGCCAACAAGAGCTGTA
AATCTTGTGTCAAACTTATAGGATGTATTGTATTCATACTTTCTTGCAGGCGCAATCCGAGCTCCAGTCTCCAATATTTG
TTGAACTGGGGAAAGCGGTGGACGGAAAGAAGTGTATCATATGTGAAGCGGTTAACTCAGAGTTCAACGAAATTGTTTCA
ATGTGTGGCGGGCCAGAGGAGAAAACCAGAGCAAGTCAATTACTGAAACAACTTACGTG---------------------
----------------AG-------------------------------------CATAAAACCTTTATATTTCATAATT
CTAATGGGCCTTT-ATTCTCCAGTATTAACTCTAGTTTTCAATGTTTAT-ACATGACTTACCTTTATCTGGTCAAGTTAA
TGTAACGACCTACATTTGCAATCAGAGGGAGTAT-----AACACTAATGGCC----------CTAGTATAAACTCTAGTT
TTCAGTTTTGGTTCCATAGCCTGCCTTTGTTTCTACAGCAGATTTACTTGGTAGTTTCTTTATGTTTCTAATTTTGTAGT
TATTTTTCTTTCTTATCTTT-AAGGGAAAAACTGTAGTGCGGAATTGATCCAGACACTTTGCAAGTGTGACAGAACTAGG
AGAAAAAATGTGTGGGAGAGATATTTGCT----GAACATAAAGGGTG-TTCCATGTATACAGAAAGTTTAATCTGAACTC
TAATTCACTAATTCATTATCAACTTCCAGTTTCATGACCAATTCATTTTTAGTCTTTAGTCTGTTACACTTGCTTAGAGA
TGCTGAAGAAAAGTGTTAACTTCATTACTTCACTTCACGTAAAGGGGACCTATTCCGATCTATTTGTATCAAATGTTTTG
GTGTCGACAAACTCGCTTCTTACACTGTTTTCTTGGTTGATGACTAGGCCCTTTCTTTTCCTACCTTTACTTTTATTTCT
GTGTCACTATATGTAAGCTAGAGGGCAATGT--------ATAAATAGCATTGTGAA-ACCCTACATTATCAGATGGGTAT
---TTCCATTCTCCATTTCAATCCCGTCATTGTGCTGTGATACTTGAAGAAGGATATGTTCAGTGTGTTCACCCTTTTAT
CTCACTGTTGG--------TCATTTCACTCTGCTTACTGTT-AGTATTCATGTAGCCTT-GGTTGGTATTCTAGTCTCAT
TGTTGGCTTGTTGATTAACTAAGCTTTCTC-TTTGGTGGTCAACAAATATGCAG-----CATATAGCATTATCTTGCTCA
ACTAAGAAATTGTA--TG-------TCTCTGTTTACTGTTTATTGTCACTTACAGTAATTTTATGCATGTGAATGGTCTT
GAATTCTGTTTGCCCCGGTCAGTCATCTACCGCATACTTAGCCAGTGCTTTTGGACCTGCAGAATTGTCCCAGACAGTCC
TTCAGCACGTATGATGGATCTTCCAACAACAAGGAAACTTGCCATGAAAAACAAAGTTGTTTTTGGTACAGGTGACCACT
GGCGTGCTCCCACTTTGACTGCTAACATGGGGTTCGTAAGAGCTGTTTCACAGTCTGGTATGCCCTTGATGACCATCGAG
CACAGACCTCGTGCCCTGATCGGCTTGTGAAGGCAGATAACCCCATAGTCTAAGTATTCCAAACTGAATGTAAGAGTCCT
GAAGTTGTAACCAGCAAGTGTGTTGTAGTCTTAGTTCAGTCGATCCC-ATATTTTTGAAACGGCAGATAATAAGACATAA
TGGATATCTCA---------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TCTCTGTACAT
AAGATTGTACTACTAGTAGTAC----------------------------------------------------------
----------------------GTAAAATCGATAGGCTCAAACAGTGATGTGTGTATATTA----CTTTAGTTTGCTGGT
TCGTCAAAATAAACAATCTTG-----------------------------------------------------------
-------------------------------------------------------------------ACGCTAGCTTCCA
CGTGGATGCTGGATCCACGATACTCTTAAAGGGCGTTCGCTGCGGGCTCGAACTTCTA-----TGTGGAACATGCTATGG
AT--GCCCCGGCCATGGAGGCATTTGCCTATTGAAGG-GGGGCTCCAGCTTGCGAATGATCTGAAAATTTTCTCCTTGTG
ATCGAATGTGATTCAACAGAAATCGTGCAAGCAATCTTGAACCCCTCAGATTACTGTGCGAC---AGGAGGAGCTGTGGT
TACCAACGATCA-----------------------------------AAGCATTGTGTCCCGGAAGTAAATGGAGTCACA
CATGAGCCTGATCCCATCCTGATTTCCTTTTTCCCCTGTCTTGTACTCCCTCCGTTCCAAATTACTCGTCATTGTTTTAG
TTCAAATTTTGAACTAAAACAATGACGAGTAATTTGGAACGGAGGGAGTATAGC--AGACAATTTGTTTAATTATATAAG
TAAACGCCAAAGTTCAAAAGAAGAACCAGGCCTCTAGAACAAGGCGCGCGGCTAAGGATGAGTGAAATTTCACGTTCTGT
AAAAACGCTATCTAGAGCCAGGCAGGCGCTGAAGGCTGAACAAAGAACTTGCACATTCAACTGGTCTCTTTCCAAAACTG
TTGTCTGGATTTAGTACTCCCTCCATATA--CATGTTTTAGTGTTTTTTGGCATGTATGTAGTCCATATTGAAATATCCA
GAATATCTTAGGAGTATTTGTAAACAGA-GGAGTAGCTGATATACACAACATCAACAAAACGCCAGCTGCCCCTCACCCG
GTTCAATGTCA
>chr1A_66
-----------------------------------------------------------------TGGCAAGTAGTTCTA
GCCTAGGAGGTTCCAAACTCCTGGTTAACACCCACCAAATATGATAATTGCAAGTAGTGCCCAA----TATTGGTACCAA
ATTTTGCGATGGCTTGCGAGGCTAACCACGGGATAGAATATATC------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------CACTAGACGAACAACCAGAACTGAACCAAGAGAGAGGGAAAATATCAACAACTACCTGTTGCTCCCCCAGAGT
AAGATTCAAAAGTTAGACAGGGAAATTCAGCGTAGCATTCCAATTTTAAACGGAATCTGACAAATACCACAAACCCTAGG
CGTTTCTCCACGGCTCGTGACAGCATAGCCTGAGCAGTGGCCGGACGAATCACCGCGCGACTCCGGCCACCACAAGGCAT
GGCGCC-CGGATGCAAAACATAGCACGCCACAGAACGCACGAAACAGAAACGACGGGACACGCCGAATCGACGAGACGAA
GCACACATCGATGGTGGCGGCACCAAATCGGGATGTGCGAAACCAAGGAGAGGGTGTAGATCTAGAGAAACGTACCGGCG
AACCGAGATCCGGAAGCCCGTGCGGTCTCGGATCCAGCGAGGCACGGCGCTTCGGGCGAGCTAGCTCGCCGTGGGAGCGG
CCGGCGGCGGCGGGAGTTCGTCGCTTGGGGGGTGGGAATTGGAGA----------AG-GGGGAGGCGGCCGAAAGAGACC
AAATGCCACGGTGCGGTTTCAAAATGACCCCAGCCCAACGGTTACATTTCTGGCCTTCTTATACGCCAGAACGGACGACT
CGTTTGGGCCAGTCGGCAACTAGGTCCAAGGCCTCCGCCGCAACTGGGCCGGCCCGCCTCGACCCACGCCTGGTTCTTCC
CCAACTCGACGCGAATCCGGCCGCCTCCTGGTTCCTGGAGCAGAGGAGCGCCGCAGCGAAAATGGCCGAGCCTCCCGCCG
CCGCCTGCCCCACCGAGCTGGAGCTCGCGCGGGCGCGGTGCCGCGCGCTGCACGATCGCCTCGCCGCGTCGCCCTCCCTG
CCGCGCCACCCCGCTCTGCGCTCCCTCCTCCGCCTCGTCGCGGCCGAGCTGCGGTTCCTTGCCTCGAGTAGCCACCCCGA
CCCCGCCAGGCCGCTCTCCTCCAACCTGCCCCACCTCGCGGCGCTCCACCTCCTCCTCACCCACCCCGCCGTGCGCTCGC
CGTCCCGCCTCTCGCCCCTCCCGGGCGTGGACTTCGCCTGCGCCTTCCGCTCCCGACCCGCGTGGGTGCTCCTCTCCGCG
CGCAACCCTTCGGGTTTCCAGTGGGTCCCGCGCAAGGGCCTCAGCTCCCGCGTCGCGGCCGTGCTGGATGCCGCGCGCTC
CGCTCCGCCGGCAACCCGCCCCGAGAAGCTGCTACTCGCCTTCGCCCGTGGCGTCGGCGCGGACATCGTGTTCGGGCTCG
CCGATGAGTTCAGGGCCGTGGAGGTCGACTTGCTAGCGGAATTCGTTGGCGAGGCCGAGGACGACAAGGAGGAAGACGGC
TGGGTTAGCGTCAGCTTCCACCCCAATGAGGAGATAAGGCGCTTTAGGGCGTTCGAGATTGAAGTGGTGGATGGTGGTGG
TGAAGTATTGTTACCGCCACCGCTCCG---------GGAGGTGGAGGAGGGGAGCGGTGACCAATTGGAGGGTT---GTT
TGTTTGCTGACTTCTTGGGGAAGATGAGGATGAACTCCATGGAGATGGTGAATCTAGACACAACGGCTCTTATTGCGATA
GTATCAGGTATCAGCAATGGCGGGGTGGGGAAGCTGATGGGTGCACCGGAGGCGGAGACCAGGGCCAGGTTCAAGTGCAA
CTACAAGTTCGTCATGGATCAGGTGCTTTGGAAACATTTGATTTTCAACCTAGAAGAGTGTGTTCATAAATAATCTAGTT
CATCTAGTTA--ATTGACTTCGAGTTTCTAATGCTGTTTGATAAATCCTGACTGTAAATATCGACAAAATTAAAGTGCAT
ACTA-------------------TACATCATATGTTTCTATAGTCCACTGAAGATGATAAGCAGAATTCAAAAGTACATA
GGATGTATTCATATTGCTATGAGCGAAACCTGTTTATTCAAAAACACAAGTAGAGGAATAT-TTGCCAATAAGAGCTGTA
AATCTTGTGTTGAACTTAATAGGA----TGTATTCATACTTTCTCGCAGGCGCAATCCGAGCTCCAGTCTCCAATATTTG
TTGAGCTGGGGAAAGCAGTGGACGGAAAGAAGTGTATCATATGTGAAGCGGTTAACTCAGAGTTCAACGAAATTGTTTCA
ATGTGTGGTGGGCCAGAGGAGAAAACCAGAGCAAGTCAATTACTGAAACAACTTATGTGAGCCTTCTTATACAACTTTGT
TTCTATGAGTTACGCAAG-------------------------------------CATAAATTCTTTATATTTCGTAATT
CTAATGGGCCTTTAATTCTCCAGTATCAACTCTAGTTTTCAATGTTTATTACATGACCTGCCTTTATCTGGTCAAGTTCA
TTTAACCACCTACATTTGCGATCAGAGGGAATATTAGATAACACTGATGCCCCTTTATCTGTCTAGTATAAAGTCTAGTT
TTCAGTTGTGATTCCATAGCCTACCTTTGATTTCGCAGCAGATTTACTCGGTAGTTTCTTTCTGCTTCTGATTTTGCAGT
CATTTTTCCTTCTTATTTTTGAAGGGAAAACTTGTAGTGCAGACTTGATCTAGACACTTTGCAAGTTTGACAGAACTAGA
AGAAAAAA-GTGAGAGAGAGATATTTGCCATCAGAAAATAAAGGGTGTTTCCATGTATACAGAAAGTTTGATCTGAACTC
TAATTCACTAATTCATTATCAGCTTCCAGTTTCATGACCAATTCATTTTTAGCCTTCGGTCTGTTACATTTGCTTAGTGA
TGCTGGA-AAAAGTGTTAACTTCATTACTTCACTTCACGTAAAGGGGATC-----------------------TATTTTG
GTGTCAACAAGCTAGCTTCTTACACAGTTTTCTTGGTTGATGACGATGCCCTTTTTTGTCCTACCTTT--TTGTATTTCT
GTGTCACTATATGTAAGCTAGAGAGGAATATATTGGGAGATAAATAGCATTGTG-AGACCCTACGTTGTCAGCACGGTAT
ACGTTCCATTCTCCATTTCAATCCCGTCATTGTACTCTCATACTCGAAGAAGGATATGTTCAGTGTGTTCGTCCTTTTAT
CACACTGATGG--------TCATTTCACTCTGTTTACCATTCAGTATTCATGTAGCCTT-GGTTGGTATTCTTGTCTCTT
TGTTGGCTTGTTAATTAGCTAAGCTTTCTC-TTGATCAC---ACAAATATGCAGCCATCCATATA-----ATATTGCTAA
ACTAGGAAACTATAGTTGTCCGTTCTCTCTGTTTACCGTATATTGTCATGTACCGTGATTTTATGCATGTGAATGGTCTT
CAATTCTGTTTGCCCCGGTCAGTCATCTACCGCATACTTAGCAAGTGCTTTTGGACCTGCAGAATTGTGCCAGACAGTCC
TTCAGCACGTATGATGGATCTTCCAACAACAAGGAAGCTTGCCATGAAGAACAAGGTTGTTTTTGGTACAGGTGACCGCT
GGCGTGCTCCCACTTTGACTGCTAACATGGGGTTCGTACGAGCTGTTTCACAGTCTGGTATGCCTTTGTTGACCATTGAG
CACAGACCTCGTGCCCTGATCGGCTTGTGAAGGCAGATAACCCCATAGTTTAAGTATTCCAAACCGAATGTAAGAGTCCT
GAAGTTGTAACCAGCAAGTGTGCTGTAGTCTTAGTTCAGTCGATCCC-ATATTTTTGAAATGGCAGATAATAAGGCATAA
TGGATATCTCATGTCTCTGTACATAAGATTGTACTACTAGCTACTAGTAAAATTGATAGGCTGAAACAGTGATGTGTGTA
TATTAAGTACTTCAGTTTGTTGGTTTGTCAAAATGTCCTGTGACATAACTCTTGTAAGGCCTGGTTCGGTTTGGAGAGGT
TTGAAGGGGTCAAAGGGGATTAAATTCCTTGCAATTCGAAATCCCCCTCAGTCCTACGTGTATCTCATGTCTCTGTACAT
AAGATTGTACTACTAGCTACTCCCTCCGTTCCAAAATAGATGACTCAACTTTGTACTATCTTTAGCACAAAGTTGGATCA
TCTATTTTGGAATGGAGTACTAGTAAAATTGATAGGCTGAAACAGTGATGTGTGTATATTAAGTACTTCAGTTTGTTGGT
TTGTCAAAATGTCCTGTGACATAACTCTTGTAAGGCCTGGTACGGTTTGGAGAGGTTTGGAGGGGTCAAAGGGGATTAAA
TTCCTTGCAATTCAAAATCCCCCTCAGTCCTACGTGCATTAAACCAAACAAGGCTTAAACAATCTTAACGCTAGCTTCCA
CGTGGATCCTGGATCCACGATACTCTTG------------------------CTTCTA-----TATGGAACATGCTATGG
AT--GCCCCGGCCATGGCGGCATTTGCCTATTGAAGG-GGGGCTC-AGCTTGCGAATGATCTGAAAATTTTCTCCTTGTG
ATCGAATGTG----------AATCGTGCAAACAATCTTGAACCCCTCAGATTACTGTGAGACAGGAGGA---GCTGTGGT
TACCGAC------------------------------------AATCAAGCATTGTGTCCCGGAAGTAAATGGAGTCACA
CATGAGCCTGAT--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------
>SNPs
SSSSSSS----------------S---S------------S-----------------------S---------------
-----------------------------------S--------------------------------------------
---------S------------------S-------------S--S-------SS-----------S-------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S---S---------------------------S---------------------------------
-----SS----------------------------------S----S---------------------------------
--------S----------------------S---S--------------------------S-----------------
------------------------------------------------S------------S------------------
-------------------------------------------SSSSSSSSSSSS--------S----------------
--------SS---------------S----S-----------------S--------S-------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
-------------------------------------------------------------------------------S
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
-------------------S-----------------------------------------------------S------
--------------------------------------------------------S-----------------------
------------------------------------S-------------------------------------------
----S--------------S--SS--------------------S-------S---------------------------
-------S--------------------------------------------------------------------S--S
-------------------------S-S-S---S-----------------S----------------------SSS---
----------------------------------------S---------------------------------------
--------------------------------------------S----S------------------------------
------------------------------S------------S---------------S--------------------
----------SS---------------------S---------S--S---------------------------------
-SSS-SS-----------------------S--S--S-----------S--------------S------S------S--
---S-------------S--------------------SS----------------------S--------S--------
--------S-S------------S---------------------SS---------------------------------
-------------------------------S-----------------------S------------------------
--------------------------S-----------------------------------------------------
------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S------------S------
-----------------------S--------------------------------------------------------
------------------S---------------------------------------S----------S----------
-------------------S-----------------------------S------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S--S---S-----------------------
-------------S--------S-S--------------S--------------------S-------------------
---------------------------------------------SSS-------------------------SS-----
---------------------------------------S----S-----------------------------------
----SSS-S-SSSSSSSSS---------SS----S---------------------S--S--------------------
---------S-----S--------------S---------------------------S---------------------
-----S--------S--------------------S--------------------------------------S-----
------------S-------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S---------------SS-------S--------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----S--S-SS-----S---S-S-SSSSS-SSSSSSSS--S-S-SSSSSSSSS--SSS
SSSS--SS-S-SS-SS-S-S-----S---------------------S--------------------------------
-----------------------------------------------------------S-------S-S----S-----
----------S-----S---------S------------------S----------------------------S-----
------------S---SSSSSSSSSSSS-----------S-----S--SSSS-S--S-SSSSS-----------------
--SS------------------------------S-SS-------S-----------S-----S-SS---SSSS------
--------------------S----------------------------S------------------------------
---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------
-------S----SSSSS-S---SSSS-S--S-SS----------------------------------------------
-------------------------------S-S---S--S---------SSSSSS------------------------
------S-S----------S------S--S-------------S------------------------------------
--------------------------------------------------------------------------------
---S-------------------------SS--------S-----------S---S------------------------
---S---------S----------S---S---------------------------------S----------------S
-----------
>forward_1038
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----------------------------------------------------------TTATACGCCAGAACGGACGG--
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>reverse_1868
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---------------------------AGACGTAGAGGAGGTGGAGG---------------------------------
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>forward_1351
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---------------------------------------------------CGCTTCCTTGCCTCGAGTAA---------
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>reverse_2678
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-------------------------------------TTCTGTGAGTTATGCGGCCA-----------------------
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>forward_2587
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-------GTGGGCCAGAGGAGAAAACA-----------------------------------------------------
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>reverse_4930
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-------------------------------------------------GTTACTGTGCGACAGGAGCT-----------
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-----------
