>input_sequence_31422
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-------------------------ATGAAGTACGGCGACGACGGCTCCACGTCCCTGGCATTGGTGCCCGTGCCCATGC
CCGGGGAGCCGACGGCGGTGGCGCCCGGTGATTCCGGGGCTTTCTCGGCGCCGGCCGGCAAACCGGCGGCGGGCGGCGTG
CTGGCGGTGCCACCGGTGGGGATGAAGAAGCGGGGTCGCCCAAAGGGCTCCACCAACAAGGTGAAGAAGCAGGACAAGGT
CATGTCTGCGCTTGCTTTCATCGGTAAATCTCTCTGAA--CTTCTCCATTTTTCTGTTATTACGGTTTTAATTACTTTTG
TGAAGCAATTAGAAGAATTATTTACCTCCTC----TTTATTTAATTTAATTACCTGTTTAGAAATTCGAAATTTACTGCC
TAGCCTCTGGACATACTGAGTAGCTTTGACTAGATCTGGGGTGTTGTACTGCGTGCAGACTGCAGGTGGAAATTACTGCT
GTACCCTTCTTGCTTTTCAAACTGTAGCCTCTTTACTGTGTATGTAGTACAGGCAAGCTTAATTGAATACTTGCAGTGAT
TTTTGAAAAAATGCA-------TAGTTAAGGATCCCTATTGCCTGACAGTTTCATCACCCAGCTGAAATTGAACTTTTGA
ACTGAAGCCTTACATGTCTGTTTGACTGAAGTTTAAAATGTGTCGCCCTGCTTCTTCTGAGATCTACACGA----GTGTT
TGATCATGTTCTTGGTGAAA-TTGTATCTCTGCAGGGACTGCAGGAGCTGGCTTCACTCCACATGTCATTGCTGTTCAAG
CTGGAGAGGTAGTAAAGATTCCTCCTCAATCCCATATTTACATTGTTGCAGTGTCTGTCATAATATGTATTTTCGCATGT
CATCCTTAGCACATACCAAAAAGGTGTGCA--------TTTTCACATCGTAACTA-------CAAATTATCCACAACACT
TGTGAATAACTTTGAGTGCTGCATTGCAGGATGTGGCTGCAAAGATCCTGTCATTTGCGCAGCATGGAGTTCGTGCAGTT
GTTGTTCTTTCAGCAAATGGCGCCATTTCAAACGTGACCCTTCGGCAATCTGCCACTTCAGGTGGGACGGTCACATACGA
GGTATGCACTTCTTATTCGAGATAATGCATCTCTTTCGATGAAATGGCAATTGCCAATATACAAAAGTTC----------
----------AAAAACTGAAATGGTAGTTGTGTTGGAATCACTGTGGACGGC-TTGTCTACGACAGGTTTGTAACTGATG
GTTCTTCTTGTTTT-CTGCCACAGGGCCGATTTGAGATACTGTCGCTGTCCGGATCGTTCACCGTGCAAGAGACTGGAGG
CCATCGTAGCCGAACCGGTGGGCTGAGTGTTTCACTTGCAAGTCCTGATGGCCGCGTCTTGGGTGGCGGAATTGCTGGAC
TCCTGATTGCCTGCACACCTATTCAGGTCTGTTCTTTCACACCAACCTCAAATCTCAGTAAATCATATATATGCAGCCAT
AGTTTCACTTTCA-----TACATAGCATTCCTAATGAAACTTTC---TACATTGCATATGCCA--ATACAGCCAAAAGTA
AAATTCTTTGCATCTTTTCGTCCCAGCGTGTTAGCATTCTTCAGTTTCTTTACTGCTTCAAACTGAGAATAATAGCTTTA
CTTAGGTTACTTTGT-------------CAATCTTTTCTATCTCATATACTAGCGAAAAGTAAAATTCTGTGCATAATTC
GCTTTCAGGATATGAGCATTCTAGCACAACTGTCTGTCTCCTGTGTTTTGGTTTATGATGTGTATGTAAAGTCC--ATGC
CTCTCTGACTGATATTCTGTGCACACTGCTGAAAATTGAATGCTGCTTCATGATTATATTCCTCAATAGCCAGACTGCTA
TTTACAGTTAGTTCCCTAGAGTTTCCACATCATTGGCATCCACCTACTA-GATCAGCTCTCTATTAGCAAGAAAAATTCT
TTGCATAATTTTGCTTTGAGTGCATTAGC---------------------------AATCGTTTGATGCACAGCTGTACA
TGTGTAGCTTGTGCATCAAAATTGCTTGTCTTTCCTAGCCCAAAGTGAAATGAA--------------------TTCAGT
ATATTAGCAGAATTATTCAGTTTCTTCACTGCTTCATG-CCAAGGATGTTAGCACAATGATCTGTCTCCTGGATTTTCGT
TTCATGCTGTTTTTGAAAAGGGCATGCCCCTCTGACTGAAATTCTGGGAAACTGTCC-AAACCTGAATGTTGGTTCATGA
TTTTATTTCTCACTAG----------------------------------------------------------------
---------------------TCATAGTACACTAGAGAAA--------TGACTAACCAGTGCTATCCTTGCACTCCCACA
GGTTGTGGTGGGAACCTTCAACACCGTGGCCGAGAAGAAGAAGGCGCCGAAGCACGCCGCCGCCGCTGCTGCTGCACATG
AACCGGCATCCGCGCCACCGAGGATGACGCCGAGCTTCGTGCCGGCGCCGATCGCCGTGCCGCCTCTCGCGCATGCTCCC
ATCAGCGTCGGGATGGCCCAGAACAGCCCGCCGTCCAGGGGCACGCTGAGCGAGTCCTCCGGGAGCCCGATGAACCAGGG
CGTCCCGGCGGCGGCCACTCCCAGCAACAGCGGCCTGTCCAGCATGCCCTGGAAGTGA----------------------
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>chr5D_1_TraesCS5D01G274900
TTAATCCCCCCGGCAAA-----TTTAATCCCTTTTTCTTTTCTCAAAAGATTACGTGAGAGCGGGGGAGTTTAGAAAGAA
AAGCAAAAGAAGAAGAAGAAGG------AAAAAGAAACGAAATTGGGAGGAGAGCTCGTGAGGGCTCCCAAATTACGTAG
GAGATAAGCGAAATCCCCAAATTTCTCGCCCCCTCTCCT-CCCCGTCCGCAGTCGTTCGAGTGGCCTGCGAGCGAGCGAG
CG--------CCCCCGAGCTCCGTCTTCCCCGCGCGCAGTACGAGCGTGCAGCCGAGA------GCTTCGCTTTGTTGCT
GCTTTTGTGTTTCCTGACTGATTATTTTCTTTGTCTTTTGTCCGTATTTTCGCGGTATTATCCTGGTTTGCGGTGATTTC
TCGGTGATTTTGCCGCGCCCTCGCTCGGGCGGGGGATCTGTAATTTCTGCGCCTGGTCTGCCAAATCCTCTCGCCGGGGC
TTGGATTACCAACCACCCCGCATTATTTTTCCATTTCGTTCTGGTTTACCGTTTCTTGCTCCCGTTTTCTCCTCAT----
------TTTT-TCCCGTCATTTGCGGCCTCGCCCCACTCGTCCCAAGATAC----TGCGAGCTCTGTTCGTCGTCAAAGA
TTTCGAGCTCTGCGCGCGCGGCGTGGGGTTTATGGTTTTCTTATAGCTGCTGCCGAGCTTGCTTGTTCTG------GGTA
GGAGCTTC-GCTTCTGC-TTTTTTTGAGGAATGATGGAGGTGAGGGCGTCGCAGGAGCAGCAGGGAGGGATGGCCGGGAG
GGAACCGTTCGGGCTGCCCAACAGCCCGCCCACGCCGCAGTCCTCCGGCCCCGTGCCCAACATGCGCATGACCTACGGCG
AGGACGGCAACGCCTACTTCCTCAAGCCGGGCTCAGCTCCGCCGCCGGCGGAGGCGTACCAGCCAGGGGGAGGCGCTGGC
CTCGACATGCCGGCTGGCCCCGACGCGGCTGCTGCGGGGGGCAATGGCGGGCCGGCGTTCGAGCTCAACATGGAGGAGGA
GGCC----------------GCGCAATGAAGTACGGCGACGACGGCTCCACGTCCCTGGCATTGGTGCCCGTGCCCATGC
CCGGGGAGCCGACGGCGGTGGCGCCCGGTGATTCCGGGGCTTTCTCGGCGCCGGCCGGCAAACCGGCGGCGGGCGGCGTG
CTGGCGGTGCCACCGGTGGGGATGAAGAAGCGGGGTCGCCCAAAGGGCTCCACCAACAAGGTGAAGAAGCAGGACAAGGT
CATGTCTGCGCTTGCTTTCATCGGTAAATCTCTCTGAA--CTTCTCCATTTTTCTGTTATTACGGTTTTAATTACTTTTG
TGAAGCAATTAGAAGAATTATTTACCTCCTC----TTTATTTAATTTAATTACCTGTTTAGAAATTCGAAATTTACTGCC
TAGCCTCTGGACATACTGAGTAGCTTTGACTAGATCTGGGGTGTTGTACTGCGTGCAGACTGCAGGTGGAAATTACTGCT
GTACCCTTCTTGCTTTTCAAACTGTAGCCTCTTTACTGTGTATGTAGTACAGGCAAGCTTAATTGAATACTTGCAGTGAT
TTTTGAAAAAATGCA-------TAGTTAAGGATCCCTATTGCCTGACAGTTTCATCACCCAGCTGAAATTGAACTTTTGA
ACTGAAGCCTTACATGTCTGTTTGACTGAAGTTTAAAATGTGTCGCCCTGCTTCTTCTGAGATCTACACGA----GTGTT
TGATCATGTTCTTGGTGAAA-TTGTATCTCTGCAGGGACTGCAGGAGCTGGCTTCACTCCACATGTCATTGCTGTTCAAG
CTGGAGAGGTAGTAAAGATTCCTCCTCAATCCCATATTTACATTGTTGCAGTGTCTGTCATAATATGTATTTTCGCATGT
CATCCTTAGCACATACCAAAAAGGTGTGCA--------TTTTCACATCGTAACTA-------CAAATTATCCACAACACT
TGTGAATAACTTTGAGTGCTGCATTGCAGGATGTGGCTGCAAAGATCCTGTCATTTGCGCAGCATGGAGTTCGTGCAGTT
GTTGTTCTTTCAGCAAATGGCGCCATTTCAAACGTGACCCTTCGGCAATCTGCCACTTCAGGTGGGACGGTCACATACGA
GGTATGCACTTCTTATTCGAGATAATGCATCTCTTTCGATGAAATGGCAATTGCCAATATACAAAAGTTC----------
----------AAAAACTGAAATGGTAGTTGTGTTGGAATCACTGTGGACGGC-TTGTCTACGACAGGTTTGTAACTGATG
GTTCTTCTTGTTTT-CTGCCACAGGGCCGATTTGAGATACTGTCGCTGTCCGGATCGTTCACCGTGCAAGAGACTGGAGG
CCATCGTAGCCGAACCGGTGGGCTGAGTGTTTCACTTGCAAGTCCTGATGGCCGCGTCTTGGGTGGCGGAATTGCTGGAC
TCCTGATTGCCTGCACACCTATTCAGGTCTGTTCTTTCACACCAACCTCAAATCTCAGTAAATCATATATATGCAGCCAT
AGTTTCACTTTCA-----TACATAGCATTCCTAATGAAACTTTC---TACATTGCATATGCCA--ATACAGCCAAAAGTA
AAATTCTTTGCATCTTTTCGTCCCAGCGTGTTAGCATTCTTCAGTTTCTTTACTGCTTCAAACTGAGAATAATAGCTTTA
CTTAGGTTACTTTGT-------------CAATCTTTTCTATCTCATATACTAGCGAAAAGTAAAATTCTGTGCATAATTC
GCTTTCAGGATATGAGCATTCTAGCACAACTGTCTGTCTCCTGTGTTTTGGTTTATGATGTGTATGTAAAGTCC--ATGC
CTCTCTGACTGATATTCTGTGCACACTGCTGAAAATTGAATGCTGCTTCATGATTATATTCCTCAATAGCCAGACTGCTA
TTTACAGTTAGTTCCCTAGAGTTTCCACATCATTGGCATCCACCTACTA-GATCAGCTCTCTATTAGCAAGAAAAATTCT
TTGCATAATTTTGCTTTGAGTGCATTAGC---------------------------AATCGTTTGATGCACAGCTGTACA
TGTGTAGCTTGTGCATCAAAATTGCTTGTCTTTCCTAGCCCAAAGTGAAATGAA--------------------TTCAGT
ATATTAGCAGAATTATTCAGTTTCTTCACTGCTTCATG-CCAAGGATGTTAGCACAATGATCTGTCTCCTGGATTTTCGT
TTCATGCTGTTTTTGAAAAGGGCATGCCCCTCTGACTGAAATTCTGGGAAACTGTCC-AAACCTGAATGTTGGTTCATGA
TTTTATTTCTCACTAG----------------------------------------------------------------
---------------------TCATAGTACACTAGAGAAA--------TGACTAACCAGTGCTATCCTTGCACTCCCACA
GGTTGTGGTGGGAACCTTCAACACCGTGGCCGAGAAGAAGAAGGCGCCGAAGCACGCCGCCGCCGCTGCTGCTGCACATG
AACCGGCATCCGCGCCACCGAGGATGACGCCGAGCTTCGTGCCGGCGCCGATCGCCGTGCCGCCTCTCGCGCATGCTCCC
ATCAGCGTCGGGATGGCCCAGAACAGCCCGCCGTCCAGGGGCACGCTGAGCGAGTCCTCCGGGAGCCCGATGAACCAGGG
CGTCCCGGCGGCGGCCACTCCCAGCAACAGCGGCCTGTCCAGCATGCCCTGGAAGTGAGCTCAGTGTCAGTCTGCATGCC
GTCGTCGTCAGTGACCAGCTTGACGTAGAACTCTGAAGCAGAAGAA---GAAAAAAAAACCTGAACTAGATGTTACCGTT
GCCTTAGCGTAATCTCGTGGTCGAGACTGTTTGTTTAGGCGTTGAACTGCTTAATGTGTC---GTCGTGGATTGTTGTTA
GCCCGGAT----GTCGTGGATTAATGTGTCGGATTATCGTCGTGTCGTCGTCG---TCGAGTTTAACCGGTGGTTATCAT
AAATTTATGAACCTTTGACATTTGGTTGTTCTCTGCTGTGTGTATGTCTGTGATGCTGATGGTTTTTCC------TTTTG
GTTTTTG-----------------------------------------------TTTTTGCAAGTTTTCCTGTGGTATTG
CTAATCTTTCTGCTG-------CCGTGATGCTGATGGTTTTTCTGTTTGGAC--------------TTTTTTATTTTTTG
CAATTTTTCCTGTGCTGCTCCTAGTCTTTCTCTAGTG-------------GGTTTTGCCATCGAGTGCGTCTTCAGATCA
GGTTTACGGTCTTTAGAGAATACGTCTTCAGGCGAAGGCGACGGTTGAGAGATCACAGGAGGCGTCCGGATGCTGGGTCG
GCTCGCTGTTGCTGGGTCCCACATCTTCTCTTCCACACAGCAGCAG-CGCTACAGCCCAAACGAGAAGACGGCCAAGAGA
AGA-----CACCATCGGCGCACGAGACTTGCGGCGCCCACCAACCTCGCCACGCCGGAACCCTAGCCAGCCAGCCGGCGA
GCCGTCCATGCGTATCGCCGGAGGGAGGCACCAGTAGAGGGCGGCAAGAGAAGGAGGAGGAGGAGGAGCGCGGAAGCGGA
ACCCGCGCG----GTGTAGGTTAGGACTT-AGGAGGGGGCGAGATGTCTGTGCGGATCAAGGCGGTGGTGGACAGGTTCG
TGAAGGAGCTGCAGGAGGCGCTGGACGCGGACATCCAGGACCGCATCATGAAGGAGCGGGAGATGCAGAGCTACATCCAG
GAGCGCGAGCGCGAGGTCGCCGAGAGGGAGGCCGCCTGGAAGGCCGAGC
>chr5B_1
TTAATCCCCCCGGCAAACCAAATTTAATCCCTTTTCCTTTTCTCAAAAGATTACGTGAGAGCGGGGGAGTTTAGAAAGAA
AAGCAAAAGAAGAAGAAGAAGAAGAAGAAAAAAGAAACGAAATTGGGAGGAGAGCTCGTGAGGGCTCCCAAATTACGTAG
GAGATAAGCGAAATCCCCAAATTTCTCCCCCCATCTCCTCCCCCGTCCGCAGTCGTTTGAGTGGCCTGCGAGCGAGCGAG
CG--------CCCCCCAGCTCCGTCTTCCCCGCGCGCAGTACGAGCGTGCAGCCGAGA------GCTTCGCTTTGCTGCT
GCTTTTGTGTTTCCCGACCGATTATTTTC-TTGTCTTTTGTCCGTATTTTCCCGGTATTATCCTGATTTGCGGTGGTTTC
TCGGTGATTTTGCCGCGTCCGCGCTCGGGCGGGGGATCTGTAATTTCTGCGCCTGGTCTGCCAAATCCTCTCGCCGGGGC
TTGGATTACCAACCACCCCGCATTATTTTTCCATTTCGTTCTGGTTTACCGTTTCTTGCTCCCGTTTTCTTTTCGTTTTT
TCCTCATTTT-TCCCGTCATTTGCGGCCTCCTCCCACTCGTCCCAAGATAC----TGTGAGCTCTGTTCGTCGTCAAAGA
TTTCGAGCTCTGTGCGCGCGGCGTGGGGTTTATGGTTTTCTTATAGCTGCTGCCGAGCTTGCTTGTTCTGCTTCTGGGTA
GGAGCTTTGGCTTCTGCTTTTTTTTGAGGAATGATGGAGGTGAGGGCGTCGCAGGAGCAGCAGAGAGGGATGGCCGGGAG
GGAGCCGTTCGGACTGCCCAACAGCCCGCCCACGCCGCAGTCCTCCGGACCCGTGCCCAACATGCGCATGACCTACGGCG
AGGACGGCAACGCCTACTTCCTTAAGCCGGGCTCAGCTCCGCCGCCGGCGGAGGCGTACCAGCCAGGGGGAGGCGCTGGC
CTCAACATGCCGGCTGGCCCCAACGCGGCTGCTGCGGGGGGCAATGGCGGGCCAGCGTTCGAGCTCAACATGGAGGAGGA
GGCCGCCAAGAAGCGCGGCCGCGCAATGAAGTACGGCGACGACGGCTCCACGTCCCTGGCATTGGTGCCCGTGCCCATGC
CCGAGGAGCCTACTGCAGTGGCGCCCGGTGATTCCGGGGCTTTCTCGGCGCCGGCCGTCAAACCGGCGGCGGGCGGCGTG
CTGGCGGTGCCGCCGGTGGGGATGAAGAAGCGGGGTCGCCCAAAGGGCTCCACCAACAAGGTGAAGAAGCAAGACAAGGT
CATGTCTGCGCTTGCTTTCATCGGTAAATCTCTCTCTAACCTTCTCCATTTTTCTGTTATTACGGCTTTAATTACTTTTG
TGAAACAATTAGAGGAATTATTTACCTGCCC----TTTATTTAATTTAATTACCTCTTTAGATATTCGAAATTTACTGCC
TAGCCTCTGGACATACTGAGTAGCTTTGACTAGATCTGGGGTGTTGTACTGCGTGCAGACTGCAGGTGGAAATTACTGCT
GTACCCCTCTTGCTTTTCAAACTGTAGCCTCTTTACTGTAAATGTCGTACAGGCTAGCTTAATTGAATAATTGCAGTGAT
TTTTGAAATAATACA-------TAGTTAGGGATCCCTACTATTTTATAGTTTCATTACTCAGCTGAAATTTAAACTTTTA
ACTGAAGTCTTGTGTGTCTGTCTGACTGAAGTTTAAAATGTGTCGCCCTGCTTCTTCTGAGATCTATACAG----GTGTT
TGAACATGTTCTTGGTGAAA-CTGTATTT-TGCAGGGACTGCAGGAGCTGGCTTTACTCCACATGTAATTGCTGTTCAAG
CTGGAGAGGTAGTAAAAATTCCTCCTCAATCCCATATTCACATTGAAGCAGTGTCTGTTATAATATGTATTTTCGCATGT
CATCCTGAGCACATACCAAAAAGCTGTGCATTTTCTGATTTTCACAATGTAACTA-------CAAATGCTCCACAGCACT
TGCGAATAACTTTGAGTGGTGCATTGCAGGATGTGGCTGCAAAGATCCTGTCATTTGCGCAGCATGGAGTTCGTGCAGTT
GTTGTTCTTTCAGCAAATGGCGCCATTTCAAACGTGACCCTTAGGCAATCTGCCACTTCAGGTGGGACGGTCACATACGA
GGTATGCACTTCTTATTCAAGATAATACATCTCTTTCGATGAAATGGTGATTGCCGATATACAAAAGTTCGAGAAAAATG
AGGCCTGATCAAAAACTGAAATAGCAGTTGTGTTGAAATCACTGTGGACGGCTTTGTCTACGACAGGTTTGTAAGTGATG
GTTCTT---GTTTT-CTGCCACAGGGCCGATTTGAAATACTGTCACTGTCTGGATCGTTCACCGTGCAAGAGACTGGAGG
CCATCGTAGCCGGACCGGTGGGCTGAGTGTTTCACTCGCAAGTCCTGATGGCCGCGTCTTGGGTGGCGGAATTGCTGGAC
TTCTGATTGCCTGCACACCTATTCAGGTCTGTTTTTTCACACCAGCCTCAAATCTCTGTAAATCATATATGTGCAGCCAT
AGTTTCACTTTCATACTGTACATAGCATTCCTGATGAAACTTTCTAGTACATTGCATATGCCAAAATACAGCCAAAAGTA
AAATCCTTTGCATATTTTCGTCCCAGCATGTTAGCATTCTTCAGTTTCTTTACTGCTTCAAACTGAGAATAATAGCTTTA
CTTATGTTACTTTGTACATTACAATTGCCAATCTTTTCTATCTCATATACTAGCGAAAAGTAAAATTCTATGCATGATTC
GGTTTCAGCGTATTAGCATTCTAGCAGAACTGTCTGTCTCCTGGGTTTTGGTTTATGATGTGTATGTAAAGGCC--ATGC
CTCTCTGACGGATATTATGTGCACACTGCTGAAACTTGAATTCTGCTTCATGATTCTATTCCTCAATAGCCAGACTGCTA
TTTACAGTTAGTTCTCTAGGGTTTCCACGTCATAGGCATCCACCTACTAAGATCAGTTCTCTATTAGCAAGAAAAATTCT
TTTCATAATTTCGCTTTTGAGTGATTCCTCTG---------CTTCTTTACTGCAGCAATCGTTTGATATATAGCTTCACA
T---------GTGCATCATGACTGCCAATCTTTTCTAGCGAAAAGTAAAAAAAAAAAACAGTGTATTAGCATTCTTCAGT
ATATTG-----------------------------------------------------------CTCCTATATTTTGGA
TTCAC---------------------------------------------------------------GTTGTTTCAGGA
TTTTATTTCTCACTAGCCTGCCATTTA----CAATTACTTTCCTAGACTCTCCACATCATTCATTGGCATCCACATATTA
GATCAGTACTGTATTAGCTAGTCATATTACACTAAAGAAATGAGTCAGTGACTAACCAGTGCTATCCTTGTA--CCCACA
GGTTGTGGTGGGAACCTTCAACACGGTCGCCG---AGAAGAAGGCGCCGAAGCACCAA------GCTGCTGCTGCACATG
AGCCCGCATCCGCGCCACCGAGGATGACGCCGAACTTCGTGCCGGCGCCGATCGCCGTGCCGCCGCTCGCGACCGCTCCC
ATCAGCGTCGGGATGGCCCAGAACAGCCCGCCGTCCAGGGGCACGCTCAGCGAGTCCTCCGGGAGCCCGATGAACCAGGG
CGTGCCGGCCGCGGCCACTCCCAGCAACAGCGGCCTGTCCAGCATGCCCTGGAAGTGAGCTCAGTGTCTGTCTGCATGCC
ATCGTCGTCAGTGACCAGCTTGACGTAGAATCCTGAAGCAGAAGAGAGGGAAAAAAAAACCTGAACTAGATGTTACCGTT
GCCTTAGCGTAATTTCGTGGTCGAGACTGTTTGTTTAGGCGTTGAACTGTTTAATGTGTC---GTCGTGGGTTGTTGTTA
GCCCGGAT----GTCGTGGATTAATGTGTCGGATTATCGTCGTGTCGTCGTC------GAGTTTAACCGGTGGTTATGAT
AAATTTATGAACCTTTGATAATTGG-TGTTCTCTGCTGGGTGTGTGGCTGTGATGCTGATGGTTATTCTTTTTGGTTTTG
GTTTTGG-----------------------------------------------TTTTTGCAAGTTTTCCGGTGGTATTG
CTAATCTTTCTGCTG-------CTGTGATGCTGATGGTTTTTCTGTTTGGACTTCTTTCTCTCTCTCTCTTTTTTTTTTG
CAAATTTTCCGGTGCTGCTCCTAGTCTTCCTCTTTCTGCTGCCGTTGCTCGGTTTTGCCAGCGAGTGCGTCTTCAGCTCT
GGTTTACGGTCTTCGTAGAATACGTCTTCAGGAGGAGGCGACGGTTTAGAGATCACAGGAGGCGTCCAGATGCTGGGTCG
TCTCGCTGGTGCTGGGTCCCACATCTTCTCTTCCACACAGCACAGG-CGCTACAGCCCAAACGAGAAGACGGCCAAGAGA
AGA-----CACCATCGGCGCACGAGACTTGCGGCGCCCACCAACCTCGACGCGCCGGAACCCTAGCCAGCCGC-------
-----CCATGGGTATCGCCGGAGGGCGGCGCCAGTAGCGGGAAACGGG---AGGAGGAGGAGGAGGAGAGCGGAAGCGGA
ACCCGCGCGCGCGGTGTAGATTAGGAGGG-GAGGAGGGGCGAGATGTCTGTGCGGATCAAGGCGGTGGTGGACAGGTTCG
TGAAGGAGCTGCAGGAGGCGCTGGACGCGGACATCCAGGACCGCATCATGAAGGAGCGGGAGATGCAGAGCTACATCCAG
GAGCGCGAGCGCGAGGTCGCCGAGAGGGAGGCCGCCTGGAAGGCCGAGC
>chr5A_1
TTAACCCCCCCGGCA---CAAATTTAATCCCTTT--CTTTTCCTAAAAGATTACGTGACAGCGGGGGAGTTTAGAAAGAA
AAGCAAAAGAAGAAGAAGAAGAAGAAGAAAAAAGAAACGAAATTGGGAGGAGAGCTCGTGAGGGCTCCCAAATTACGTAG
GAGATAAGCGAAATCCCCAAATTTCTCGCCCCCTCCCCTCC-CCGTCCGCAGTCGTTCGAGTGGCCTGCGAGCGAGCGAG
CGAGCGAGCGCCCCCGAGCTCCGTCTTCCCCGCGCGCAGTGCGAGCGTGCAGCCGACGCCGAGGGCTTGGCTTTGTTGCT
GCTTTTGTGTTTCCTGGCTGATTATTTTCTTTGTCTTTTGTCCGTATTTTCCCGGTATTATCCTGATTTGCGGTGATTTC
TCGGTGATTTTGCCGCGCCCTCGCTCGGGCGGGGGATCTGTAATTTCTGCGCCTGGTCTGCCGAATCCTCTCGCCGGGGC
TTGGATTACCAACCACCCCGCATTATTTTTCCATTTCGCTCCGGTTTACCGTTTCTTGCTCCCGTTTTCTTTTCGTTTTC
TCCTCATTTTTTCCCGTCATTTGCGGCCTCGTCCCACTCGTCCCAAGATACTGTGTGTGAGCTCTGTTCGTCGTCAAAGA
TTTCGAGCTCTGTGCGCGCGGCGTAGGGTTTATGGTTTTCTTATAGCTGCTGCCGAGCTTGCTTGTTCTGCTTCTGGGTA
GGAGCTTC-GCTTCTGCTTTTTC-TGAGGAATGATGGAGGTGAGGGCGTCGCAGGAGCAGCAGGGAGGGATGGCCGGGAG
AGAGCCGTTCGGACTGCCCAGCAGCCCGCCCACGCCGCAGTCCTCCGGCCCCGTGCCCAACATGCGCATGACCTACGGCG
AGGACGGCAACGCCTACTTCCTTAAGCCGGGCTCAGCTCCGCCGCCGGCGGAGGCGTACCAGCCAGGGGGAGGCGCTGGC
CTCGACATGCCAGCTGGCCCCGACGCGGCTGCTGCGGGGGGCAATGGCGGGCCGGCGTTCGAGCTCAACATGGAGGAGGA
GGCCGCCAAGAAGCGCGGCCGCGCAATGAAGTACGGCGACGACGGCAACACGTCGCTGGCATTGGTGCCCGTGCCCATGC
CCGAGGAGCCCACTGCTGTGGCGCCCTGTGGTTCCGGGGCTTTCCCGCAGCCTGCCGTCAAACCGGCGGCGGGCGGCGTG
CTGGCGGTGCCGCCGGCGGGGATGAAGAAGCGGGGTCGCCCCAAGGGCTCCACCAACAAGGTGAAGAAGCAGGACAAGGT
CATGTCTGCGCTTGCTTTCATCGGTAAATCTCTCTCTAACCTTCTCCATTTCTCTGTTATTACGGT-TTAATTACTTTTG
TGAAGCAATTAGAGGAATTATTTACCTGCCCTTTATTTATTTAATTTAATTTCCTGTTGAGAAATTCGAAATTTACTGCC
TAGCCTCTGGACATACTGATTAGCTTTGACTAGATCTGGGGTGTTGTACTGCGTGCAGACTGCAGGTGGAAATTACTGCT
GTACCCTTCTTGCTTTTCAAACTGTAGCCTCTTTACTGTAACTGTCGTACAGGCAAGCTTAATTGAATAATTGCTGTGAT
ATTTGAAATAATGTGTAGCTACTAGCTAGGGATCCCTATTGCCTGACAGTTTCATCACCCAGCTGAAATTTAACTTTTTA
ACTGAAGCTTTACATGTCTGTTTGACTGAAGTTTAAAATGTGTCGCACTGCTTCTGTTGAGATCTCTATACGGGTGTGTT
TGATCATGCTCTTGGTGAAATTTGTATTTCTGCAGGGACTGCAGGAGCTGGCTTTACTCCACATGTCATTGCTGTTCAAG
CTGGAGAGGTAGTAAAAATTCCTCCTCAATCCCACATTCACATTGTAGCAGTGCCTGTTATAATATGTATTTTCGCATGT
CATCCTGAGCACATACCAAAAAGCTGTGCA--------TTTTCACATTGTAACTACAAATAACAAATTGTCCACAGCACT
TGTGAATAAC-TTGAGTGCTGCATTGCAGGATGTGGCTGCAAAGATCCTGTCATTTGCGCAGCATGGAGTTCGTGCAGTT
GTGGTTCTTTCAGCAAATGGCGCCATTTCAAACGTTACCCTTCGGCAATCTGCCACTTCAGGTGGGACGGTCACATACGA
GGTATGTACTTCGAATTCGAGATAATACATCTCTTTCGTTGAAATCACTCTA----------------------------
----------------------------------------------GAAGGC-TAGTCTATGACAGGTTTGTAAGTGATG
GTTCTT---GTTTTTCTGCCTCAGGGCCGATTTGAGATACTGTCACTGTCTGGATCATTCACCGTGCAAGAGACTGGAGG
CCATCGTAGCCGAACCGGTGGGCTGAGTGTTTCACTTGCAAGTCCTGATGGCCGCGTCTTGGGTGGCGGAATTGCTGGAC
TTCTGATTGCCTGCACACCTATTCAGGTCTGTTCTTTCACACCAACCTCAAATCTCAGTAAATCATATATGTGCAGCCAT
AGTTTCACTTTCATG-----CATAGCATTCCTAATGAAACTTTC---TACATTGCATATGCCAAAATACAGCCAAAAGTA
AAATTCTTTGCATATTTTCGTCCCAGTGTGTTAGCATTCTTCAGTTTCTTTACCGTTTCAAACTGAGAATAATAGCTTTA
CTTATGTTACTTTGTAAATTACAATTGCCAATCTTTTCTATCTCATATACTAGCGAAAAGTAAAATTCTGTGCATAATTC
GGTTTCATCGTGTTAGCATTCTAGCACAGCTGTCTGTCTCCTGGGTTTTGGTTTATGATGTGTATGTAAAGGCCATATGC
CTCTCCGACGGATATTCTGTGCACACTGCTGAAAATTGAATGCTGCTTCATGATTCTATTCCTCAGTAGTCCGACTGCTA
TTTACAGTTAGTTCCCTAGAGTTTCCACATCATTGGCATCCACCTACTA-GATCAGTTCTCTATTAGCAAGAAAAATTCT
TTGCATAATTTCGTTTTGAGTGCATTAGCATTCCTCTGATTCTTCTTTACTGCAGCAATCGTTTGATGCATAGCTGTACA
TGTGTAGCTTGTGCATGATAATTGCTCATCTTTCCTAGCCCAAAGTGAAATGAA--------------------TTCAGT
ATATTAGCAGAATTCTTCAGTTTCTTCACTGCTTCATAACCAAGGATGTTAGCACAATGATCTGTCTTCTGGATTTTCGT
TTCATGATG-TTTTGAAAAGGGCATGCCTCTCTGACTGAAATTCTGGGGACACTGTTGAAACCTGAATGTAGCTTCATGA
TTTTATTTCTCACTAGCCAGACTGTTATGTCCAACTACTTTCCTAGACTCTCCACATCATTGGCATCCACT---------
---------TGTATTAGTAAGTCATTACACACTAGAGAAA--------TGACTAACCAGTGCTATCCTTGCA--CCCGCA
GGTTGTGGTGGGTACCTTCAACACCGTGGCCGAGAAGAAGAAGGCACCGAAGCACCAAGCT---GCTGCTGCTGCACATG
AGCCCGCATCCGCGCCACCGAGGATGACGCCGAGCTTCGTGCCGGCGCCGATCGCCGTGCCGCCGCTTGCGCCCGCTCCC
ATCAGCGTGGGGATGGCCCAGAACAGCCCGCCGTCCAGGGGCACGCTGAGCGAGTCCTCCGGCAGCCCCATGAACCAGGG
AGTCCCGGCGGCGGCCACCCCCAGCAACAGCGGCCTGTCCAGCATGCCCTGGAAGTGAGC----------TCTGCATGCC
ATCGTCGTCAGTGACCAGCTTGACGTAGAACTCTGAAGCAGAAGAAGAAGAAAAAAAAACCTGAACTAGATGTCACCGTC
GTCTTAGCGTAATTTCGTGGTCGAGACTGTTTGTTTAGGCGTTGAACTGTTTAATGTGTGTCAGTCGTGGATTATTGTTA
GCCCGGATGGATGTCGTGGATTAATGTGTCGGATTATCGTCGTGTCGTCGTCGTCGTCGAGTTTAACCGGTGGTTATGAT
AAATTTATGAACCTTTGACATTTGG-TGTTCTCTGCTGGGTGTGTGGCTGTGATGCTGATGGTTGTTCTTTTTGGTTTTT
GTTTTTGCAAGCTTTTTGCAAGTTTTGGTGTTCTTTGTGGATTTTTCTTTATTTTTTTTGCAAATTTTCCTGTGATGCTG
CTAATGTTTCTGCTCCTAGCTCCCGTGGTGCTGATGGTTTTTCTGTTTGGA------------TGTTTTTTTTTTTTGCG
CAATTTTTCCTG-----CTGCTGGTGTTGATCCGTATGTTGATGTTACTGGGTTGCTG----GAGTACGTCTTCAGCTGA
AGTTGACTGGCTTTGGAGACTCCGTCTTCAGGAGAAGGCGACGGTTCAGAGATCACGGGAGGCGTCCGGATGCTGGGTCG
GCTCGCTGCTGCTGGGTCCCACATCTTCTCTTCCACACAGCACAGGGCGCTACAGCCCAAACGAGAAGACGGCCAAGAGA
AGAGAAGACACCATCGGCGCACGAGACTCGCGGCGCCCACCAACCTCGCCACGCCGGAACCCTAGCCAGCCAGCCAGCCA
GCC-----TGGGTATCGCCGGAGGGCGGCGCCAGTAGCGGGAGACGA------GAGGGGGAGAAGGAGAGCGGAAGCGGA
ACCCGCGCG----GTGTAGATTAGGAGGGGAGGAGGGGGCGAGATGTCTGTGCGGATCAAGGCGGTGGTGGACAGGTTCG
TGAAGGAGCTGCAGGAGGCGCTGGACGCGGACATCCAGGACCGCATCATGAAGGAGCGGGAGATGCAGAGCTACATCCAG
GAGCGCGAGCGCGAGGTCGCCGAGAGGGAGGCCGCCTGGAAGGCCGAGC
>SNPs
-----------------------------------S--------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S-------------S--------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------SS--S-----
-------------------------------S-------------------------S----------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
---S--------S-------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S------S--S--S----------------------------------------S----------------------
-----------S--------------------------------------------------------------------
-----------------------------------SS-------------------------------------------
-------------S-------------S-S--------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------SS----S-----------------------S----------
--------S-------------------S-----------------------------------------S-------S-
------------------------------------------------------------------S--SS---------
---------------------------S--------------------------S-------------------------
----------------S---------------------S-------S-----------S---------------------
------S----------------S-----------------------S--------------------S------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S---------------------S------S------------------------
----------------------S-S----------S--------------------------------------S-----
------SSS-----------------------------------S-----S-----------------------------
--------------------------------------------------------------------------------
-S--------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
----S---------------------------------------------------------------------------
-S------SS---S-----------------------------S---------------------------S--------
---------S---------------------------------------------S------------------------
--------------------------------------------------------S-----------------------
-----------S----------------------------------------------------------S---------
------------------S-------SS----------------------------------------------------
--------------S----------------------S------------------------------------------
------S--S------------------S-------------------S-SSSSSSS---------------S-------
--------------------------------------------------------------------------------
--------------------------S---------------------------------------------SS------
-------------------------------------------------------SSS--SSSS----------------
-S--S-----------------------------------------------------------S-------SS------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
S-------------------------------------------------------------------------------
-------------S-----------------------------------S------------------------------
-----------------------------------------------------------------------------S--
-------------------------S------------S----S--S-----------------S---S-----------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
----------------------------S----SSSS-----------------------S---------------S---
--------------S-----------------S-------------S---------------------------------
--------S---------------------------------SSS-----------------------------------
---------------------------------------------------------------------------S--S-
---SS-----S--------------S---S-------S---S-S-S--SSS-----------------S-----------
-------------------S------SSS---------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>forward_555
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TTGCTCCCGTTTTCTCCTCA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_2482
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-CCTGATTGCCTGCACACCTA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>forward_618
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------CCACTCGTCCCAAGATACTGC----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_2654
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------CTTTTCGTCCCAGCGTGTTAG----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>forward_2482
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TGGCGGAATTGCTGGAC
TC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------
>reverse_4489
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TTGCTGGGTCCCACATCTTC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
