>input_sequence_31415
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----------------------------------------ATGGCCCTGCAGGTCGCCGGCGGCGCGGGATGTTGCGGCT
GCCTCCCGCTCCTCGGCCAGCGGCGAACAGCGGCGTTTCGCCCGCCCCGTGCGGTCGCGTCCGAGGGCGCGGCGGTGGAG
GACGGGAGCAAGGTGATGTTGGGCGGGTCCGGCGTGGCGGTGACCAAGCTTGGCATCGGGGCCTGGTCCTGGGGCGACAC
CACCTACTGGAACGACTTCGAATGGGACGGTACGTTCGGCCGCGCGCAATCCAGATAACCTTCTTCCAAGTTGAACCCAT
AGCTCTTCTTGATCCACCTGCACCTGCGTTCATCAATTAGTTATCTCTTTCTGGTGAACTGATTTGTGCACTTCTTCATA
ATTAGGAT----TATATACTCAGCACGCTGGTTGTGTTATTCACCTGTTGCATCATTGCATTGTTGTTGGCGTTTCTTGG
ATGAAATTATGTTCATGCTTGCCATGCACCTGAGGTGCTTGTTGCATTGCCTGTCAAAACTTTGTGCCACAGCACATGTC
ACGTGTATACTCTCTAAATTTTTAGCCCCAGAAAACCTTTGACCATGAACGGTAACCAGCAAGCTGCAAAAACACCAAAA
A-AAAATGTGTTTTAAGTCTGTAATATTGAATTCATTTCACA-TTGCTCTTGAGTTTTATGCCGGCACACTGATATCTGA
TTGCTGCTACATGTCTAACATAAACGAGCATTTTCTGAATTTCCCAGATAGGAAACTCAAGGATGCCAAGGGAGCATTCG
AAGCGAGCCTTGATAGTGGAATAACCTTCTTCGACACTGCAGAAGTATATGGTGCAGGGGTAGGGATCAAGATAGTTCTT
GATTACTTCTTGCTGTATTGCTCATTCTCTAGATCATTTCAGAGCAACCCTGACAACCTTCTGATGTTGATGACATTTAG
GTATCGGGAGCGATAAATTCAGAAAGCCTACTGGGAAGGTATACCATGCATCATTATACACCATGCCCGTATATTTTGAT
AATGAAGTCTTCACAACGTCTGTTGCAAATTCCCCTTAATTCCAATCAGATTTATCAAGGAAAGGAAAGAAAAAGAAGGG
GTCGAGGTGGCCATTGCAACAAAGTTTGCGGCTCTTCCATGGAGGTTTGGCCGGGGAAGTGTTATTTCTGCACTAAAGGG
CTCACTTTCCCGCCTTGGTGTCTCCTCGGTTGAGTCATACCAACTCCATTGGTTAGTAGTTCATCAATATATAGCTTTAA
TGTTATTTGTAACTCTTCTTAGCTTGCTGAAACTGTTCTTTTCATACCCTTTTCAGGCCAGGGATATGGGGCAATGAAGG
TATCCGAACCTACATAA---ATGAAGAATATATTTTTAGGGAACTTTAATATCTTATTTTAAA-----------------
---------------------------------------------CCCACTGCAGTGCAGTAAACTAATTGTTTTATTTC
TTTCATAATCCAGGTTACCTTGACGGCCTTGCTGATGCTTATGAGCAAGGTCTTGTAAAATCCGTTGGAGTCTCAAACTA
CAGCGGTTTGTAAAAGCTGACTTTATTTCTCATTTGATGGAGCGTGTTATGCTAGCTGCTTGTTTTATGGTAAAACTAAG
CTGGATCACATTCATTACCAGAGAAACGTCTGCGAGATGCTCACGAGCGCCTCAAGAAGAGGGGAGTTCCACTTGCTTCA
AACCAAGTAAATTACAGTCTGATTTACAGGAACCCTGAGGAAAATGGGGTGAAGGCAGCTTGTGATGAGCTTGGTATTAC
TTTGATTGCATATTCCCCAATAGCCCAAGGTATAGTTACGCTTTTCTCTTTTCCTTCACCTTTGCTTGTTTGACTA----
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----------------------------------------------------------CTGAGCACTCAGCTCAACTAGC
TTCAGGGCTCGCGCAATCGCCTGATTAGTTATGTCTTATGGTGTAGTTTATCATACACTTAGTTTGTGTTTTATATGTAA
TTAGCTGTCAGCACACAAATGTGAAATATAATGCACCCTTTTGAACCCTGTTTCTT------TTCTTTTCAGGTGCTTTG
ACAGGAAAATACACTCCAGCTAATCCCCCAACTGGACCTCGTGGACGGATATACACTTCTGACTTCCTGTCCAAGGTTGC
CGCACCTTAACTTCGAACTCTCCCTTTCATCTCTGTTGCGGCTCTGCTCACTCTTGTCATTCCACAATGCAGCTCCAACC
GCTTATTAACAAAATTAGGGAGATTGGAGGAAGCTATGACAAAACCCCAACTCAGGTACTGTGTTCTTTATTGCATGGTT
AATTATACAGTGTTCATCCTCTATTATCAAGTCTTGCCTTATCTTAGCGAT-TACAAAGAAACTACACAATCATGACGAC
AAAACAATGGCAATATGCATCAACTGGTTTTTGTTCATGTGCAGGTGGTTCTGAACTGGCTTATTTGCCAGGGCAACGTG
GTGCCGATCCCGGGGGCAAAGAACGCAGAGCAGGCCCGGGAGTTTGCCGGTGCGTTAGGGTGGCTCTTGACCGAGCAGGA
GGTTGAGGAGCTGCGGTCCATGGCGCGCGAGGTGAAGCCCGTCATGGGTTTCCCAGTAGAGAAGCTGTAA----------
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>chr2A_1_TraesCS2A01G254100
AATTAGACATGACAAGTGTAGTTAACCAAAACAAAGAGAGTTGACATGCTTTTCTAACTATATTTGCCATCCCGGATAAC
TACATCTGCCATCCTGGATGGCAACTAAATCGACATCTCGCGGGTATCTATTGTAGCTGCGCCAGGACGTGTGGGCACAT
ATTGCTTGTTGCCACATGCGCGGGATGGGGTTGACTAGTACTTGTTGGGCGTGTGGCACGAAGTAGCTGCGCCCATACGC
GTGGACAATTCTACTCTTCGTTCACACACGGCCTGTGTGGACTACCCCCTACTCATGCCACACACGGTGTGTGGGCGAAT
GCCTATTATGCCACGTGTGGTGGATATCGACGTCTTTTTTTTGCAAAAGTGATGGTTGATAAAGTTACATGTAAGCATTT
TTATGTGTATATTGTTGATGTATAATATGTTGCCTAATCTCTTTCATCAGATCGGTCTTTTGATTGCATTGGTTAGAGCA
TGCACTTCTATATGGTATCAGAGCTAAGAGGTCTTAGTTCAAGACCCGGCTGGCTCAATTAAATTGAAACTCACTTTCGG
TCCACGTTTAGGCCTGAGGGAGCCACACGTGAGAGAGAGTGTTGACGTATAATATGCTGCCTAGTCTCTTCCATTATATT
AGTTTTTTGGTTGCATTGGCTAGAGCATGCACTTTTACATATATCAACTAAATTATTACAAAAAATGTTTTCGGCTTGCC
CATTTCCAAAATTGAGACAGCTTGTATTTTGAGTGGAGTGGCCCGCAACGAATCACTTCCGTTCGGAAGGCCCTGAAGAA
GAGAAGAAACTAGAGCGCGTCCGGCTGAGCCCCACGCGCGCGCGCGCGGTCACCGGCGCCTCCACGTGACCCGCCCCTCT
CTTCCCGTGGCCAAACAAAACGCGCGCGCTTCGCTGCCACTCGCGCGCCTCGCCAAGAACACCACCCTGCGGCGCCCACT
TACCACGCCACGAGAATTCCTACCCCCGCTTCCGTCCGCGATGGCCCTGCAGGTCGCCGGCGGCGCGGGATGTTGCGGCT
GCCTCCCGCTCCTCGGCCAGCGGCGAACAGCGGCGTTTCGCCCGCCCCGTGCGGTCGCGTCCGAGGGCGCGGCGGTGGAG
GACGGGAGCAAGGTGATGTTGGGCGGGTCCGGCGTGGCGGTGACCAAGCTTGGCATCGGGGCCTGGTCCTGGGGCGACAC
CACCTACTGGAACGACTTCGAATGGGACGGTACGTTCGGCCGCGCGCAATCCAGATAACCTTCTTCCAAGTTGAACCCAT
AGCTCTTCTTGATCCACCTGCACCTGCGTTCATCAATTAGTTATCTCTTTCTGGTGAACTGATTTGTGCACTTCTTCATA
ATTAGGAT----TATATACTCAGCACGCTGGTTGTGTTATTCACCTGTTGCATCATTGCATTGTTGTTGGCGTTTCTTGG
ATGAAATTATGTTCATGCTTGCCATGCACCTGAGGTGCTTGTTGCATTGCCTGTCAAAACTTTGTGCCACAGCACATGTC
ACGTGTATACTCTCTAAATTTTTAGCCCCAGAAAACCTTTGACCATGAACGGTAACCAGCAAGCTGCAAAAACACCAAAA
A-AAAATGTGTTTTAAGTCTGTAATATTGAATTCATTTCACA-TTGCTCTTGAGTTTTATGCCGGCACACTGATATCTGA
TTGCTGCTACATGTCTAACATAAACGAGCATTTTCTGAATTTCCCAGATAGGAAACTCAAGGATGCCAAGGGAGCATTCG
AAGCGAGCCTTGATAGTGGAATAACCTTCTTCGACACTGCAGAAGTATATGGTGCAGGGGTAGGGATCAAGATAGTTCTT
GATTACTTCTTGCTGTATTGCTCATTCTCTAGATCATTTCAGAGCAACCCTGACAACCTTCTGATGTTGATGACATTTAG
GTATCGGGAGCGATAAATTCAGAAAGCCTACTGGGAAGGTATACCATGCATCATTATACACCATGCCCGTATATTTTGAT
AATGAAGTCTTCACAACGTCTGTTGCAAATTCCCCTTAATTCCAATCAGATTTATCAAGGAAAGGAAAGAAAAAGAAGGG
GTCGAGGTGGCCATTGCAACAAAGTTTGCGGCTCTTCCATGGAGGTTTGGCCGGGGAAGTGTTATTTCTGCACTAAAGGG
CTCACTTTCCCGCCTTGGTGTCTCCTCGGTTGAGTCATACCAACTCCATTGGTTAGTAGTTCATCAATATATAGCTTTAA
TGTTATTTGTAACTCTTCTTAGCTTGCTGAAACTGTTCTTTTCATACCCTTTTCAGGCCAGGGATATGGGGCAATGAAGG
TATCCGAACCTACATAA---ATGAAGAATATATTTTTAGGGAACTTTAATATCTTATTTTAAA-----------------
---------------------------------------------CCCACTGCAGTGCAGTAAACTAATTGTTTTATTTC
TTTCATAATCCAGGTTACCTTGACGGCCTTGCTGATGCTTATGAGCAAGGTCTTGTAAAATCCGTTGGAGTCTCAAACTA
CAGCGGTTTGTAAAAGCTGACTTTATTTCTCATTTGATGGAGCGTGTTATGCTAGCTGCTTGTTTTATGGTAAAACTAAG
CTGGATCACATTCATTACCAGAGAAACGTCTGCGAGATGCTCACGAGCGCCTCAAGAAGAGGGGAGTTCCACTTGCTTCA
AACCAAGTAAATTACAGTCTGATTTACAGGAACCCTGAGGAAAATGGGGTGAAGGCAGCTTGTGATGAGCTTGGTATTAC
TTTGATTGCATATTCCCCAATAGCCCAAGGTATAGTTACGCTTTTCTCTTTTCCTTCACCTTTGCTTGTTTGACTA----
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----------------------------------------------------------CTGAGCACTCAGCTCAACTAGC
TTCAGGGCTCGCGCAATCGCCTGATTAGTTATGTCTTATGGTGTAGTTTATCATACACTTAGTTTGTGTTTTATATGTAA
TTAGCTGTCAGCACACAAATGTGAAATATAATGCACCCTTTTGAACCCTGTTTCTT------TTCTTTTCAGGTGCTTTG
ACAGGAAAATACACTCCAGCTAATCCCCCAACTGGACCTCGTGGACGGATATACACTTCTGACTTCCTGTCCAAGGTTGC
CGCACCTTAACTTCGAACTCTCCCTTTCATCTCTGTTGCGGCTCTGCTCACTCTTGTCATTCCACAATGCAGCTCCAACC
GCTTATTAACAAAATTAGGGAGATTGGAGGAAGCTATGACAAAACCCCAACTCAGGTACTGTGTTCTTTATTGCATGGTT
AATTATACAGTGTTCATCCTCTATTATCAAGTCTTGCCTTATCTTAGCGAT-TACAAAGAAACTACACAATCATGACGAC
AAAACAATGGCAATATGCATCAACTGGTTTTTGTTCATGTGCAGGTGGTTCTGAACTGGCTTATTTGCCAGGGCAACGTG
GTGCCGATCCCGGGGGCAAAGAACGCAGAGCAGGCCCGGGAGTTTGCCGGTGCGTTAGGGTGGCTCTTGACCGAGCAGGA
GGTTGAGGAGCTGCGGTCCATGGCGCGCGAGGTGAAGCCCGTCATGGGTTTCCCAGTAGAGAAGCTGTAAATCCGCGGTC
AAGTTACCCTCGTGGTTTACTGGTACACAGGATTTCTGTGATCCTAGATATAGGAGTTGTAGTTCTGCGAAAAGATGTGG
AGTTGTGAAAAGAACAAAGACGTAGAAAATCATAACGGAAATAACTGTATATTCAGGCTCAACGATCAAATTACATCAAA
ATGATAGTTGTTTTGTTCTTTTGGTTTGTGTTCTCTGACGGATGAAATTCTGGGAAGCATTAGC----------------
------------------------------------------------------------TTTCTTGGTGTGTGATCTAC
TCCTATACGTGCATGTTTCACGGAGTGACGAGGGACCGGAGTATCTACCTCCCAAAACCCCACTCACCGTCGCCAGGCAG
GGTGGGCTGTAATCGCTAGGGAGGATCTTGCCGATGATCCTCTAGATCCCTGTAACATCCCAATTTTCCTAATTTGGATG
TTAGTATGTTATTCATATGCATCTCATATTTTAATTTGCATTATTTGCTTTTTCTGAAATATTCTTTTCATTATGCAACT
AAAGGCAATTTATTGGAGCGGAGATAACATGACTTCTCCCTTGTTTTAAAAATGTTCATAATGTCCATAATATTATTTCC
AGTTTATCTAGTATGTTCTGGTATTTTTCATTATCTCTAATATATTTTATTTGAGTCTTTTATTACTGTTTGTGTGGCCT
GTTGCATAAAAACTACTCCCTCCGTCCCAAAATATAAGAACGTTTTTTACACTAGCATAGTGTAAAAAACGTTCTTATAT
TTTAGGACAGAGGGAGTATTTTTTAAAAATTGCATTAGAGTAGGAACTAGTGTTCCTGTAGTTTATATTAGTAGTGCTAT
TTTTTACTGTGTGTCTATATATATATTTTTGTTTTATACTGGTGTCTTTATTTTTGTTTTATTTTTACTGTGATTTTTTA
AATAGCCAGCCAGCCAGCCAGCGGGCCCAGTAGAGCGCTACACGCCCGCGGCCCAGCAACCCTGCCGCTCCAGCTTGTGC
TTTTGAACCCCCTCCCACTTCCTCAT
>chr2D_679
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--------------------------------------ATATATCAGCTAAATTATAAAAAAAAATGTTTTTGGCTTGCC
CATTTCCAAAATTGAGACACCTTGTATTTTGAGTGGAGTGGCCCGCAACGAATCACTTCCGTTCGGAAGGCCCTGAAGAA
GAGAAGAAACTAGAGCGCGTCCGGCTGAGCCCCACGCGCGCGCGCGCGGTCACCGGCGCCTCCACGTGACCCGCCCCCCT
CTTCCCGTGGCCAAACAAAACGCGCGCGCTTCGCTGCCACTCGC----CTCGCCAAGAACACCACCGTGCCGCGCCCACT
TGCCACGCCTCGGGAATTCCTACCCCGACTTCCGTCTT-GATGGCCCTGCAGGTCGCCGGCGGCCCGGGATGCTGCGGCT
GCCTCCCGCTCCTCGGCCAGCGGCCAACAGCAGCGTTTCGCCCGCCCCGCGCGGTGGCGTCCGAGGGCGCGGCGGTGGAG
GACGGCAGCAAGGTGATGCTGGGCGGGTCCGGCGTGGCGGTGACCAAGCTCGGCATCGGGGCCTGGTCCTGGGGCGACAC
CACCTACTGGAACGACTTCCAGTGGGACGGTACGTTCGGCCGCGCGCAGTCCAGATAACCTTCTTCTAAATTGAACCCAT
CGCTCTTGTTGATCCACCTGCACCTGCGTTCATCAATTAGTTATCTCTTTCTGGTGAACTGATTTGTGCACTTCTTCAAC
ATTAGGATTATATATATACTCAGCACGCTGGTTGTGTTATTCACCCGTTGCATCACTGCATTGTCGTTGGCGTTTCTTGG
ATGAAACCATGGTCATGCTTGCCATGCACCTGCGGTGCTTGTTGCATTGCCTGTCAAAACTTTGTGCCACAGCACATGTC
ACGTGTATGCTCTCCAATTTTTTAGCCCCAGAAAACCTTTCACCATGAACGCTAACCAGCAAACTGCAAAAATACCAAAA
ACAAATTGTGTTTTAAGTCTATAATATTGCGTTCACTTCGCA-TTGCTCTTGAGTTTTATGCCGGCACACTGATATCTGA
TTGCTGCTACATGTCTAACATGAACGAGCATTTTCTGAATTTCCCAGATAGGAAACTCAAGGATGCCAAAGGAGCATTTG
ATGCGAGCGTTGATAGTGGAATAACCTTCTTCGACACTGCGGAAGTATATGGTGCAGGGGTAGGGATCAAGATAGTTCTT
GATTACTTCTTGCTGTATTGCTCATTCTCTAGATCATTTCAGAGCAACCCTGACAACCTTCAGATTTTGATGACATTTAG
GTATCGGGAGCGATAAATTCAGAAAGCCTACTGGGAAGGTATATCATGCATCATTATACACCATGCCCGTATATTTTGAT
AATGAAGTCTTCACAACGTCTGTTGCAAATTCCCCTTAATTCCAATCAGATTTATCAAGGAAAGGAAAGAAAAAGAAGGG
GTCGAGGTGGCCATTGCAACAAAGTTTGCAGCTCTTCCATGGAGGTTTGGCCGGGGAAGTGTTATTTCTGCACTAAAGGG
CTCACTTTCCCGCCTTGGTGTCTCCTCGGTTGAGTCATACCAACTCCATTGGTTAGTAGTTCATCAATATATAGCTTTAA
TGTTATTTGTAACTCTTCTTAGCTTGCTGAAACTGTTCTTTTCGTATCCTTTTCAGGCCAGGGATATGGGGCAACGAAGG
TATCCTAACCTACATAA---ATGAAGAATATTTTTTTAGGGAACTTTAATATCTTATTTTAAA-----------------
---------------------------------------------CCCACTGCGGTGCAGTAAACTAATTGTTTTATTTC
TTTCACAATCCAGGTTACCTTGACGGCCTTGCTGATGCTTATGAGCAAGGTCTTGTAAAATCCGTTGGAGTCTCAAACTA
CAGCGGTTTGTAAAAGCTGACTTCATTTCTCATTTGATGGAGCGTGTTATGCTAGCTGCTTGTTTTATGGTAAAACTAAG
CTGGATCACATTCATTACCAGAGAAACGTCTGCGAGATGCTCACGAGCGCCTCAAGAAGAGGGGAGTTCCACTTGCTTCA
AACCAAGTAAATTACAGTCTGATTTACAGGAACCCTGAGGAAAATGGGGTGAAGGCAGCTTGTGATGAGCTTGGTATTAC
TTTGATTGCATATTCCCCAATAGCCCAAGGTATAGTTATGCTTTTCATTTTTCCTTCACCTTTGCTGTTTCA--------
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-----------------------------------------------------CTATGCTGAGCACTTAGCTCAACTAGC
TTCAGGGCTTGCGCAATCGGGTGATTACTTATTTCTTCTGGTGTAGTTTATCATAATCTTAGTCTGCGTTTTATATGTAA
TTAGCTGTCAGCACACAAATGTGAAATATAATGCACCCTTTTGAACCCTGTTTCTTATTCTTTTCTTTTCAGGTGCTTTG
ACAGGAAAATACACTCCAGCTAATCCACCAACTGGACCTCGTGGACGGATATACACTTCTGATTTCCTGTCCAAGGTTGC
CGCACCTTAGCTTCGAACTCTCCCTTTCATCTCTGTTGCGGCTCTGCTCACTCTTCTCATTCCACAATGCAGCTCCAACC
GCTTATTAACAAGATTAGGGAGATTGGAGGAAGCTATGACAAAACCCCAACTCAGGTACTGTGTTCTTTATTGCATGCTT
AATTATACAGTGTTCATCCTCTATTATCAAGTCTTGCCTTATCTTAACGATGTACAAAGAAACTACACAATCATGATGAC
GAAACAATGGCAATATGCATCAACTGGTTTTTGTTCATGTGCAGGTGGTTCTGAACTGGCTTATTTGCCAGGGCAACGTG
GTGCCGATCCCGGGGGCAAAGAACGCAGAGCAGGCCCGGGAGTTTGCCGGTGCGCTAGGGTGGCTCTTGACGGAGCAGGA
GGTTGAGGAGCTGCGGTCCATGGCGCGCGAGGTGAAGCCCGTCATGGGTTTCCCGGTAGAGAAGCTGTAAATCCGCGGCC
AAGTTACCCTCGTGGTTTACTGGTACACAGGATTTCCCTGATCATAGATATAGGAGTTGTCGTTCTGAGAAAAGATGTGG
AGTTGTAAAAAGAACAAAGACGTAGAAAATCATAACGGAAGTAAGTGTATATTCAGGCTCAACGATCAAATTACATCAAA
ACGATGGTTGTTTTGTTCTTTTGGGTTGTCTTCTCTGACGGATGAAATTCTGGGAAGCATTGGCCCAAGACAAAAATCCT
GAGACGCAACAGACATGCGTGCAAGACTGAAGCATTTTTTTTGTTTTTGTTCTTTTTGAATTTCTTGGTGTGTGATCAAC
TCCTA--CGTGCATGTTTCACGGAGTAACGAGGGACCGGAGTATCTACCTCCCAAAACCCCACTCACCGTCGCCAGGCAG
GGTGGGCTGTAATCGCTAGGGCGGATCTTGCCGATGATCCTCTAGATCCCTG----------------------------
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>chr2B_679
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--------------------------------------ATATATCAGCTAATTTATTA-AAATAATGTTTTTGGCTTGCC
CATTTCCAAAATTGAGACACCTTGTATTTTGAGTGGAGTGGCCCGCACCGAATCACTTCCGTTCGGAAGGCCCTGAAGAA
GAGAAGAAACTAGAGCGCGTCCGGCTGAGCCCCACGTGCGCGCGCGCGGTCACCTGCGCCTCCACGTGACCCGCCCCCCT
CTTGCCGTGGCCAAACAAAACGCGCGCGCTTCGCTGCCACTCGC----CTCGCCAAGAACACCACCGCGCGGCGCCCACT
TACCACGGCACGAGAATTCCTGCCCCCGTTTCCGTCCGCGATGGCCCTGCAGGTCGCCGGCGGCGCGGGATGTTGTGGCT
GCCTCCCGCTCCTCGGCCAGCGGCGAACAGCAGCGTTTCGCCCGCCCCGCGCGGTGGCGTCCGAGGGCGCGGCGGTGGAG
GACGGCAGCAAGGTGATGCTGGGCGGGTCCGGCGTGGCGGTGACCAAGCTTGGCATAGGGGCCTGGTCCTGGGGCGACAC
CACCTACTGGAACGACTTCGAGTGGGACGGTACGTTCGGCCGCGCGCAGTCCAGATAACCTTCTTCTAAATTGAACCCAT
CGCTCTTCTTGATCCACCTGCACCTGCGTTCATCAATTAGTTATCTCTTTCTGGTGAACTGATTTGTGCAGTTCTTAAAA
ATGAGGAT----TATATACTCAGCACGCTGGTTGTGTTATTCACCTGTTGCATCATTGCATTGTTGTTGGCGTTTCTTGG
ATGAAATTATGGTCATGCTTGCCATGCACCTGAGGTGCTTGTTGCATTGCCTGTCAAAACTTTGTGCCACAGCACATGTC
ACGTGTATTCTCTCTAAATTTTTAGCCCCAGAAAACCTTTGACCATGAACAGTAACCAGCAAACTGCAAAAATACCAAAA
C--AAATGTGTTTTAAGTCTGTAATATTGAGTTCATTTCGCATTTGCTCTTGAGTTTTATGCTGGCACACTGATATCTGA
TTGCTGCTACATGTCTAACATGAACGAGCATTTTCTGAATTTTCCAGATAGGAAACTCAAGGATGCCAAAGGAGCATTCG
ATGCGAGCGTTGATAGTGGAATAACCTTTTTTGACACTGCGGAAGTATATGGTGCAGGGGTAGGGATCAAGATAGTTCAT
GATTAGTTCTTGCTTTATTGCACATTCTCTAGATCATTTCAGGCCAACCCTCACAACCTCCTAATTTTGATGACATTTAG
GTATCGGGAGCGATAAATTCAGAAAGTCTACTAGGAAGGTATATAATGCATCATTATACACCATGCCCGTATATTTTGAT
AATGAAGTCTTCACATCGTCCGATGCAAATTCTCCTTAATTCCCATCAGATTTATCAAGGAAAGGAAAGAAAAAGAAGGG
GTCGAGGTGGCCATTGCAACAAAATTTGCCGCTCTTCCATGGAGGTTTGGCAAGGGAAGTGTAATTTCTGCACTAAAGGG
CTCACTTTCCCGCCTTGGTGTCTCCTCGGTTGAGTCATACCAACTTCATTGGTTAGTAGTTCATCAATATATTGCTTTAA
TGTTATTTGTAACTCTTTTTAGCTTGCTGAAACTGTTCTTTTCAAATCCTTTTCAGGCCAGGGATATGGGGCAACGAAGG
TATCCGAACTTATATAAATGATGAATATTATTTTTTTAGCGAACTTTAATATCTTATTTTTAGCCCACTGCGCAAGCGGG
AACTACATGCACCGGGCTGCCTTTTTTTTAATATCTTATTTTAGGCCCACTGTGGTGCAGTAAACTAACTGTTTTATTTC
TTTTGTAATCCAGGTTACCTCGACGGCCTTGCTGATGCTTATGAACAAGGTCTTGTAAAATCCGTTGGAGTCTCAAACTA
CAGTGGTTTGTAAAAGCTGACTTCATTTCTCATTTGATGGAGCATGTTATGCCAGCTGCTTGTTTTATGGTAAAATTAAG
CTGAATCACATTCATTACCAGAGAAACGTCTGCGAGATGCTCACGAGCGCCTCAAGAAGAGGGGGGTTCCACTTGCTTCA
AACCAAGTAAATTACAGTCTGATTTACAGGAACCCTGAGGAAAATGGGGTGAAGGCAGCTTGTGATGAGCTTGGGATTAC
TTTGATTGCATATTCCCCAATAGCCCAAGGTATAGTTATGCTTTTCATTTTTCCTTCACCTTTGCTCGCGTCCGTGGCGT
GGTGACGAGGCTGCGCCGGCCGGCGCGGCGCGCGCGCAGGGGCTCTCGGTGGCTTGGTCGATGCAGAGGTGTGTGTGCGT
GGCGCTAGCTTGTGGGGGTCCGAGGCGAGTCCTGTGCGGCGGATCTGGCGGCTCCGGTGACGGGTATGGGCGCCGCTGAT
GCGTGGAGGTCGGGGCACTGCAGAGGTGCGGTTGCGCGCAAGCGAGTTGAGGCCTGCAGCGAGGTGCGTCGGCGGGCAGC
AAGGGGCGGCTGGAGGTGGAGGTTCTGGCGCGGGAGGCATGTTTGTCGGATCTGGCGCCCCGGCGCAGTTCTAGGGGTGC
TGAGGTCCGAGGCGTGGGAGGCAAGCGCATGGCGGTGTGCCCGGCGAATCGGTCGTCTTCGAAGCAGGGGGCTGCGGATG
CAGAGGATCTGATGTCTCCGGTTTCCGTGGGGTTTCCGGCGTGCACGAGGATCTGCGTGTCGGTGTGCCTGGTCCAGGGC
TGCGGCTGGGATCCGCGGTGGTTCTCGGCCTCGGGCGGCGCTCGTTCCTTGCTGGCATGGTGCTGTGCAGGGCGCGGAGG
CTCGTGCTGCGTCTGGTGGCACTGGTTCTGGCCGGCGGCTCCCTGTTTGTCTCCGCGAGGTGCGGTTGGCTACGGTGGCT
GCTCGGTTCTTCTTCGTCAACTTGCTTGTTCGTGGGAGGTTGTGGCTGGTGGTCTTGTCGGTGCTGGATTGACGTGTTGG
TGCTAGTAGCTTGGGTGAAAACCCTGTCTCCGGCCATGGGCATTTGACCGGCGATGGCGGCGGCCTTAGACGCCGTAGAC
CTTCTTGGAGGCATCGTCGCATTGCTATTGCACCCTTCCCATGTTGGATCCGGCCGTTGCTACAGCACCGGGGAAACCCT
AGATCCTGAGCGATCGGATGATGGCGGCGTCGTGGCGTCGTAACCCCTCTTGAGGGCTTCATCTTTGTAGCTGGGCATCG
GCAAGCGGGACCGGAGGTGATGAAGTTGGCGCTGAGGCTTCTGTGGCAACGGTGTCACGGGGAATGATGTAGGAGACGTG
GCTTTGGTTGAGGTAGTCGGCTCTTCTCCGGCGTGTTCGTGGGATGGCCTCGGCTGGTTTGGTGCTTTGAAGTCGAAGCT
GCGGTGGCGGGGCCCTGTGGTGTACGATGACGGGTAGCAGGTGGTCCATTCGGTGATCTTCAACGACGCCAACCTTGCCT
GGTTCCCCTTCGTAGCTTCCTGTCGGTGTCGGAGCTGCGCTGTCTCGTCGCGGTGGCTGAGGTTTGACGCGGATCTTCAT
GTGCACATCATTTTCAGTGTGGGTTGGTTCGACGATCGTCTTTGGCGAAGTCGGAGTCGTTTCTCAGAGTTTGGGATTGC
GATGACGCCTTTAGGGGAGAAATGATGACGATAACGTTGTTGGATTGTCTCGACGAGGCCCTCTCTGGAGTGGCGTGTGT
GGGTATCTTATGTGTGCCGCTCATCGGTTTGTAATGGTTTTCGCCTGGTTTTCCACTAATTAACTGGGCAACTCTCTTAT
GCTTATTTAATGGATGAGGCAAATTTTTTGCCTCCGTTTCAAAAAAAAAAAGCCTATGCTGAGCACTTAGCTCAACTAGC
TTCAGGGCTTGCGCAATCGGGTGATTACTTATTTCTTCTGGTGTAGTTTATCATAATCTTAGTCTGCGTTTTATATGTAC
TTAGCTGTCAGCACACAAATGTGAAATATAATGCACCCTTTTGAACCCTGTTTCTTTTTCTTTTCTTTTCAGGTGCTTTG
ACAGGAAAATACACTCCAGCTAATCCACCAACTGGACCTCGTGGACGGATATACACTTCTGATTTCCTGTCCAAGGTTGC
CGCACCTTAACTTCAAACTCTCCCTTTCATCTCTGTTGTGGTTCTGCTCACTCTTCTCATTCCACAATGCAGCTCCAACC
GCTTATTAACAAGATTAGGGAGATTGGAGGAAGCTATGACAAAACCCCAACTCAGGTATTGTGTTCTTTATTGCATGCTT
AATTATACAGTGTTCATCCTCTATTATCAAGTCTTGCCTTATCTTAATGATGTACAAAGAAACTACACAATCATGACGAC
GATACAATGGCAATATGCATTAACTTGTTTTTGTTCATGTGCAGGTGGTTCTTAACTGGCTTATTTGCCAGGGCAACGTG
ATTCCGATCCCGGGGGCAAAGAACGCAGAGCAGGCCTGGGAGTTTGCCGGTGCGCTAGGGTGGCTCTTGACGGAGCAGGA
GGTTGAGGAGCTGCGGTCCATGGCGCGCGAGGTGAAGCCCGTCATGGGTTTCCCGGTAGAGAAGCTGTAAAT-CGCGGCC
AAGTTACCCTCGTGGTTTACTGCTACACAGGATTTCCGTGATCCTAGATATAGGAGTTGTAGTTCTGTGAAAAGGTGTGG
AGTTGTAAAAAGAACAAAGACGTAGAAAATCATAACGGAAGTAAGTGTATATTCAGGCTC-ACGATCAAATTATATCAAA
ACGATAGTTGTTTTGTTCTTTTGGTTTGTGTTCTCTGACGGATGAAATTCTGGGAAGCATTAGCCGAAGACAAAAATCCT
GAGAGGCGACAGACATGCGTGCAATACTGAAGCATTTTTTTTTTTTGAATTC-----------CTTGGTGTGTGATCTAC
TCCTA--CGTGCATGTTTCACGGAGTGACGAGAGACCGGAGTATCTACCTCCCAAAACCCCACTCACCATCGCCAGGCAG
GGTGGGCTGTAATCGCTAGGGTAGATCTTGCCGATGATCCTCTAGATCCC------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-----------S------------S--------
-------------------S------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------SSSS------------------S-------------
--------------------------------------------------------------------------------
-------------------------------S-----------------S-----S------------------------
-----S------------S-------------------------------------------------------------
---------------------S--------------------------S-----------------S--S----------
S-----------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------S-----------------------------------------------------S---------S-------
------------------------------S--------S----------------------------------------
---------------------S-----------------------------------------------S----------
-S------S-------------------------------S---------------------------------------
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-------------------------------------------S------------------------------------
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-----------------------------S--------------------------------------------------
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----------------------------------------------S---------------------------S-----
-------------------------------S------------------------------------------------
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-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------S-------SS------------------S----SSS-S----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
---------S---------SS------S----S----S-----------------SS------S--S-------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------S-----------------
-------------------------------------------------------S------------------------
------------S----------------------------------------------------------------S--
----------------------------------------------S---------------------------------
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------------------------------------------------------S----------------S--------
------------------------------------------------------S-----------------------S-
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------S---------------------------------S---S-----------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----SS-------------------------------------------------------------------------
---------------------S------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_672
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------GCATTGGCTAGAGCATGCAC------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------
>reverse_1762
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-AGCGAGCCTTGATAGTGGAA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>forward_1139
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GACGGGAGCAAGGTGATGT-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4776
--------------------------------------------------------------------------------
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-------------------------------------------------------GTCATTCCACAATGCAGCTCC----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------
>forward_1762
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------------TGCCAAGGGAGCATTCG
AA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_5095
--------------------------------------------------------------------------------
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------------------------------------------------------TTAGGGTGGCTCTTGACCGA------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_2315
--------------------------------------------------------------------------------
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--------------------------------------------------------GCCAGGGATATGGGGCAAT-----
--------------------------------------------------------------------------------
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>reverse_5908
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------GTTTGTGTGGCCT
GTTGCAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
