>input_sequence_31352
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-----------------------------------------------------AGCAGGGCGGCCGGACCACCCACACCG
CCGTCTCTCTACGCCCACACGACGCCGGAGAACCTCGCAGCGCCGAACCGGAAAAGGACCGTGCGAGCGCCGCCTGGCTC
GGTGGCGTTCATCTCCGGGAGGCGAGAGCGCGTGCAGCGCGCAGCGGCGGAGGCTTTTCTCATCCCCCACCGCAGCTCCT
GGAACCCCAACCCTCTCTTCCGCCCAAACTCCACGCGTCGAGAAATTCGGGGAGGATGTCCGGATTGGCCGCGAGCGCGC
TGCCTCTCGCCGCAGGTCCCAACTGCCCGCCGCGCCTACTGACGCCATGTCCGTGCTTATCTCCTTTTCCCAGCCAGATC
CTCACTTTCCGCCCGCGGTTTCCTTCGTTACCAGGCCCGTCTCCGCTTCCGTGGTGCAGACCCACTCGACCCAGCGGCCT
AACGAGGCCTCCACTACTCAAGGTCGTAATTTCAATGGCGCCAGAATCATATTCCCTTGTTCTATTCTTCTTA---TGGT
CACTATGCTAGTGCTATATTATATATACATGGTTTGCGCTTACAGGTTGCCGAGCTGCAACCATGTCTTCCTGGCCGATT
CGCTTCGGCCAGACGGCTGAAATTTGGGGCTGCGTCGGGCAATGGGCGTCAGGGACTTCGCGCCAGCCAATATCGGTTTG
ATGATGATGAGCCGCTGTGGCTTGCGGTGGTTAGAGAATTCGCTGTGTAAGTGCAGATCTTGCCGACTTGCTCCCCCCTG
TTTGTGCTGTTCGACGATGAGATGAATTAGAATTGCCCTCTGTTATCAGGAGTGTGAGGAACTTGGTGGTTTTCTTGGCT
GAGCAGCCAAGGCAATTGAAGCACCTCGAATGGCCGGCCTTCCGGAATACGGTATGGCACTTGCATTTACAGTT---TAT
TTCTTAGGTCGGTTTTATTCAGGTTCTGTTTTCATATGTTCTTATCAGTGCAATCTAT--TCCCTTGTGGCCCTACCAGC
TCACCAGTTAAGGAATGTGAACCTGTGAGGATATGTTGAGTTTGCTGTAAGG-----------------------ACACA
TGATTTAGAGTGATGCGGTAGGTTGGTTTTAAGATTGCAGTGTGCATAGTTCATTCTTGACAAGATTGCGTAGATAAACT
CTAAACCTTATAGCTTGAACCAACAGGAGTCAAAAT--------------------------------------------
-------------------------------------------GTATTTATGTTCAGTAAAGTAGTACT-----------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AAATTATGCC
CTTATCATGATTCCTTTCATTTTGTCCAATGTCCGTTCTCTATGATTCTTCTAGACTTCTAGTATCATATGCATGCATCC
TATTCCTAGATGCTAAAGTAGCTCGTTGCTGTTATGTATTTTAGTTGTTGGTCAGTTTGTTAGCACACCATATTATTTGA
TGTCTTGCTGCTTTTCAGCCGTTAAGATTTTTAAGTTGCTACACCATTCATGCCATGGCTACTTTGGAAACTGTTCTATG
TTTATTTAAATCATTGTCATTGGCAGTTGAGGACGGCAGCACTTACTCTCATACTCGTTGTGGTGTTCATTGTTGCCTTG
TCTTCCATTGATGCTGCCCTTTCATACATTTTGTCCTGGCTACTTCGGAAATCTGCGTAGTTTACTGGTATGCTACTTGT
CCCTTTT---TTTACAACTTCCTAGTCCAATGTGCATTTAGCCTCAGAATGCATATCCTGCATTGTTCCTCATATAAAGG
ATGTAATTATTTTTGGGATATGTCGGAATGCTATTATCAACTGACAACATGCTCCTCCCTCGAGTCCCTTCATGCTATTA
AATTGAGAGAGTAATAGCAAATGTGAATGCCTAATGCTGTATTAATTTGTAAGGACCACATCGGTCAATGAACTGGGCGA
TACCATCTGTCATGCTGTCGAGTTGGCTGGC-AGTTATTCATTGATCAGCATGTATATGTTTATTATAAAACTCTTATTT
AGCAGAGCAAGATAGAAACAGCACAACAGCAGCAATTCAATCTCTTGTTGTTGCTTGTA--CCATGCAGACCTGGC--AA
ATTATGAAGGAGTAGATGATGCTATACAG----GAGGTGGGAAGGTGGTTAATGTCCCAGTATACCATGTTATCCTGAGT
GTTGAGAGAATCGAAAGGAATGCTCTGCAACTGGTC--TGTTTTTCGCGAATGTATAATGTATTTATGCAGTTGCTTACT
ATGGTAGTTAAATGCTAATTATTTCTATTTGGTTGAGAAAGGAAAGAAGACAGAGTTACTCATTTGCCCCTAATTCTGTA
ATTCAAACTCTTATCTAGTTGTCGTCAGTTCTTGTTGAATGTGCTCCACCAGTGAGAATCTCAACTTGTTACGTTAAGAA
CTGTTTTCTTTTTCTTGTAAATGTATCGGTCCATATTCTGAGATCTGAATAAATTTGCATTTCTTAGATGCTGAAATGTA
ACTGAGATGTGTACTGAGGCAATCACAGCTTTTTCTTTCTCATGCACCTGCCAATTTGTATTAGAAGAACTGATTGCACC
CTGATCCATTGTTTTTT--TCAGAAAAATTGCCCTGATTCGTCATATGCTTAAAGTGCACAGGGCACCAATATAAAATGT
TTG-----------------------------------------------------------------------------
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>chr5D_1_TraesCS5D01G240700
ACATAGGCGCTCCCTTAGTAATGAAATCACTAGTTAAGGAGCATTCTTTGCAAAGGTCACTCCCACCTCTTTAGGTTGCG
ACAAGTGTCGCACTATATGTACGCCACTCTTCGCAACCTGAGAATTTTCCTTTTTTCCATAGATTCGTATTCAAAACGTT
TTATCTCTCAAACCGTACATCCAAATCTCGAACCGTTTTCATCATTGGATTCCTTGCTCCGAGATCTTCAGGTTTCGACG
AACTTTTTTTAACGAAAAAATCGGACGAAAACCCCGAATCGGGAGCACATTTTTTTACTTTCCGAAAGGCACGGCTGTGC
CCCTCGTGTAAGCAAATCCGTGCATCCACAAGGAGTAAATCCGTGCCTCTCGTGGTGGAAAAAAAACGTGTTTTCACCTT
TTTGCGGCCGTGCCTCTCGCGTAAGTAAATCCGTTCCTCCACGAGAAGTAAATCCGCGCCTCTCGTGGAAGGAAAAGAAA
AAGGAAATGTGTGTGTTTTTTCATTTCGCGAAAGCAAATCCGTGCCTCACGTCGTAGGAAAGAAAACACATTTTTTGTTT
TTTGTTAGAGGCACGTCTGTGCCACTCGCGGAAGCAAATCTGTGCCTTCACGAGAAGTAAATTTGTGCCTCTTACGGAAG
AAAAAAAAAAAAACATATATTTTTCGCATCAAATTTTTCGTCCAAAACCTAAGAAATGCCGGGGAAAAACTGAAAAACCC
AACAAAATCATCTAAAATCTGAAAAGTGCGTGCAAAAGAATATAGAAAAACAAAATTCGAAGGAAGCTCTCAGAATGCGA
CACGTGGTGGTGCTGAGAGCGTGCTAAATAACGCTCTCTCAACCCACTCCAAATAACCGAGGCTTCTGAAGGAGCGCTGT
TTGATTAGTTGCTTCCCTCTACGGCCTCCCGAGACTGTGAAAGCGGGCCGCCGTGACACTATAACGGGCCGTCTATCCAT
-------------CCCAGCGCTTTGGTTCGTTCCCAGCACACGGCCCAGTAACAGCAGGGCGGCCGGACCACCCACACCG
CCGTCTCTCTACGCCCACACGACGCCGGAGAACCTCGCAGCGCCGAACCGGAAAAGGACCGTGCGAGCGCCGCCTGGCTC
GGTGGCGTTCATCTCCGGGAGGCGAGAGCGCGTGCAGCGCGCAGCGGCGGAGGCTTTTCTCATCCCCCACCGCAGCTCCT
GGAACCCCAACCCTCTCTTCCGCCCAAACTCCACGCGTCGAGAAATTCGGGGAGGATGTCCGGATTGGCCGCGAGCGCGC
TGCCTCTCGCCGCAGGTCCCAACTGCCCGCCGCGCCTACTGACGCCATGTCCGTGCTTATCTCCTTTTCCCAGCCAGATC
CTCACTTTCCGCCCGCGGTTTCCTTCGTTACCAGGCCCGTCTCCGCTTCCGTGGTGCAGACCCACTCGACCCAGCGGCCT
AACGAGGCCTCCACTACTCAAGGTCGTAATTTCAATGGCGCCAGAATCATATTCCCTTGTTCTATTCTTCTTA---TGGT
CACTATGCTAGTGCTATATTATATATACATGGTTTGCGCTTACAGGTTGCCGAGCTGCAACCATGTCTTCCTGGCCGATT
CGCTTCGGCCAGACGGCTGAAATTTGGGGCTGCGTCGGGCAATGGGCGTCAGGGACTTCGCGCCAGCCAATATCGGTTTG
ATGATGATGAGCCGCTGTGGCTTGCGGTGGTTAGAGAATTCGCTGTGTAAGTGCAGATCTTGCCGACTTGCTCCCCCCTG
TTTGTGCTGTTCGACGATGAGATGAATTAGAATTGCCCTCTGTTATCAGGAGTGTGAGGAACTTGGTGGTTTTCTTGGCT
GAGCAGCCAAGGCAATTGAAGCACCTCGAATGGCCGGCCTTCCGGAATACGGTATGGCACTTGCATTTACAGTT---TAT
TTCTTAGGTCGGTTTTATTCAGGTTCTGTTTTCATATGTTCTTATCAGTGCAATCTAT--TCCCTTGTGGCCCTACCAGC
TCACCAGTTAAGGAATGTGAACCTGTGAGGATATGTTGAGTTTGCTGTAAGG-----------------------ACACA
TGATTTAGAGTGATGCGGTAGGTTGGTTTTAAGATTGCAGTGTGCATAGTTCATTCTTGACAAGATTGCGTAGATAAACT
CTAAACCTTATAGCTTGAACCAACAGGAGTCAAAAT--------------------------------------------
-------------------------------------------GTATTTATGTTCAGTAAAGTAGTACT-----------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AAATTATGCC
CTTATCATGATTCCTTTCATTTTGTCCAATGTCCGTTCTCTATGATTCTTCTAGACTTCTAGTATCATATGCATGCATCC
TATTCCTAGATGCTAAAGTAGCTCGTTGCTGTTATGTATTTTAGTTGTTGGTCAGTTTGTTAGCACACCATATTATTTGA
TGTCTTGCTGCTTTTCAGCCGTTAAGATTTTTAAGTTGCTACACCATTCATGCCATGGCTACTTTGGAAACTGTTCTATG
TTTATTTAAATCATTGTCATTGGCAGTTGAGGACGGCAGCACTTACTCTCATACTCGTTGTGGTGTTCATTGTTGCCTTG
TCTTCCATTGATGCTGCCCTTTCATACATTTTGTCCTGGCTACTTCGGAAATCTGCGTAGTTTACTGGTATGCTACTTGT
CCCTTTT---TTTACAACTTCCTAGTCCAATGTGCATTTAGCCTCAGAATGCATATCCTGCATTGTTCCTCATATAAAGG
ATGTAATTATTTTTGGGATATGTCGGAATGCTATTATCAACTGACAACATGCTCCTCCCTCGAGTCCCTTCATGCTATTA
AATTGAGAGAGTAATAGCAAATGTGAATGCCTAATGCTGTATTAATTTGTAAGGACCACATCGGTCAATGAACTGGGCGA
TACCATCTGTCATGCTGTCGAGTTGGCTGGC-AGTTATTCATTGATCAGCATGTATATGTTTATTATAAAACTCTTATTT
AGCAGAGCAAGATAGAAACAGCACAACAGCAGCAATTCAATCTCTTGTTGTTGCTTGTA--CCATGCAGACCTGGC--AA
ATTATGAAGGAGTAGATGATGCTATACAG----GAGGTGGGAAGGTGGTTAATGTCCCAGTATACCATGTTATCCTGAGT
GTTGAGAGAATCGAAAGGAATGCTCTGCAACTGGTC--TGTTTTTCGCGAATGTATAATGTATTTATGCAGTTGCTTACT
ATGGTAGTTAAATGCTAATTATTTCTATTTGGTTGAGAAAGGAAAGAAGACAGAGTTACTCATTTGCCCCTAATTCTGTA
ATTCAAACTCTTATCTAGTTGTCGTCAGTTCTTGTTGAATGTGCTCCACCAGTGAGAATCTCAACTTGTTACGTTAAGAA
CTGTTTTCTTTTTCTTGTAAATGTATCGGTCCATATTCTGAGATCTGAATAAATTTGCATTTCTTAGATGCTGAAATGTA
ACTGAGATGTGTACTGAGGCAATCACAGCTTTTTCTTTCTCATGCACCTGCCAATTTGTATTAGAAGAACTGATTGCACC
CTGATCCATTGTTTTTT--TCAGAAAAATTGCCCTGATTCGTCATATGCTTAAAGTGCACAGGGCACCAATATAAAATGT
TTGGCTGCAGGCAAGCATCTATCTGGCAGTTATCGGCGC----------------------------CATGGATCTGAAT
TTGGACTTTCTGTCTCATGGATATGAAACTACATAACCATTTCCTCTATACAGTTCCATAGTGGATGCAGATCTTTGGAG
AAATGAGGAGACGAAGATGGAGGCGATCGAGTTTTGCCGGAGACGGAGCGCTCGGGTCCTCACTGGAGCGAGCAGCCGGC
ATTCATCTTCCTCCAGGTTATCTCTCATGATCACATATTTTGTTGCATCATATCAACTGGGGTTGCCCTGAAATCTGAAT
CACAGGCTGCACCATGCGGTTCATGTTTATAATAGCGATAAAAATGCACTTCTCGATTGACACAACTCATGGGATGGGAC
CACACATGACACAGAATCTGATGCACTGTGATGATTATTCATAGTTCTCATCTAATCAGTTTGCTTCCGTCATGTCGTCT
GACAGAGCATATTCTTTAATGTCTGTATTCACAAGCACCATTCAGTTATA--------TACATCCAAGCGGAATTGAGAA
GCATGGGATGGTGGGAGGGAG-AAGCACAAATGCATTTTATGGCATGGACTCTTCCTTTTCTGCTCATAAAATAAGGGTA
CTGAAATCCACATGCATATTGCACAAGAGAAAGAACTAGAAACTACTGCAGAAGTATGATATGTTACATCCGTACATATA
CTTCAGACTATTTCTGCAAGGTTGCAACACACAAGCCAGTCACATAAATTATGACATTTGATATGGTACAAGTGATTACC
CCTATACCACTCACTACATCTTTCACCTAATCGTCTAAAAGAGCCATCAGCTCGAAACATCAATTTCAAACCCGAAACCA
AGTCAACCAACCCAGTGCTTACTAGTCAACAATACTAGCTATAGCTAAATACATGGCATCAGTAATGTACACACAAATGC
AAAAACTTCATAGCACACTGGTCCATTTACAATGCTAAGTACTTGCCAATTGACCCAATAGATTGACCTGCCAAAATAAT
>chr5B_904
--------------------------------------------------------------------------------
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-----------------------GCCTCCCGAGACTGTGGAAATGGGCCGCCATGGCACTATAACGGGCCGTCTAGGAAA
ATCATCCATCATCCCCAGCGCTTTGGTTCGTTTCCAGCACATGGCCCAGTAACAGCAGGGCGGCCGGACCACCCAC--CG
CCGTCTCTCCACGCCCACACGACGCCGGAGAACCTCGCAGCGCCGAACCGGAAGAGGACCCTGCGAGCGCCGCCTGGCTC
GGTGGCATCCATCGCCGGGAGGCGAGAGCGCGTGCCGCGCGCAGCGGCGGAGGATTTTCTCGTCCCCCACCGCAGCTCCT
GAAACCCCAACCCTCTCTTCCGCCCAAACTCCACGCGTCGAGAAATTCGGGGAGGATGTCCGGACTGGCCGCGAGCGCGC
TGCCTCTCGCCGCAGGTCCCAACCGCTCGCCGCGCCCACTGACGCCATGTCCGTGCTCATCTCCTCTTCCTAGCCAGATC
CTCACTTTCCGCCCGCGGTTTCCTTCGTTTGCAGGCCCGTCTCCGCTTCCGCGGTGCAGACTGACTCGACCCAGCGGCCT
AACGAGGCCTCCACTACTCAAGGTCGTGATTTC-ATGGCGCCAGAATCATATTCCCTTGTTCTATTCTTCTC--------
CACTATGCTAGTGATATA-----TATACATGGTTTGCGCTTACAGGTTGCCGAGCTGCAACCATGCCTTCTTCCCCGATT
TGCTTCGGCCAAGCGGCTGAAATGTGCGGCTGCGTCGGGCAATGGGCGTCAGGGACTTCGCGCCAGCCAATACCGGTTTG
ATGATGATGAGCCGCTGTGGCTTGCGGTGGTTAGAGAATTCGCTGTGTAAGTGCGGATCTTGCTGACTTGCTCCCCCTTG
TTTGTGCCGTTCGACGATGAGATGAATTAGAATTACCCTCTGTTATCAGGAGCGTGAGGAACTTGGTGGTTTTCTTGGCT
GAGCAGCCAGGGCAATTGAAGCACCTCGAATGGCCGGGCTTCCGGAATACAGTATGGCACTTGCATTTAAAGTTTATTAT
TTCTTAGGTCGGTTTTATCCAGGTTCTGTTGTCATATATTCTTAACAGTGCAATCTAT--TCCCTTGTGGCCCTATCATC
TTACCAGTTAAGGAATGTGAACCTGTGAGGATATGTTGAGTTTGCTATATGTTTCAGGATGTGTTCTAAGTTCTAACACG
TGATTTAGAGTGATGCAGTAGGTTGGTTTTAAGATTGCAGTGTGCATAGTTCATTCTTGACGAGTTTGCGTAGATAAACT
CTGAACCTTATAGCTTGAACCAACATGAGTCAAAAT--------------------------------------------
-------------------------------------------GTATTTATGTTCAATAAAGTAGTACTCCCTCCATTCC
TAAATATAAGTCTTTGTAGAGATTCCACTATGAACTATATACGGATGTATATAGATGCATTTTAAGTGTGGATTCATTCA
TTTTCCTCCGTATGTAGTCCACCTAGTGGAATCACTACAAAGACTTACATTTAGGAACGGAGGGAGTACTAAATTATGCC
CTTATCATGATTCCTTTCATTTTGTCCAATGTTCGTTCTCTATGAATCTTCTAGACTTCTAGTATCATATGCAT------
--------------------------------------------------------------------------------
-------------------------GATTTTTAAGTTGCTACATCATTCATGCCATGGCTACTTTGGAAACCGTTCTATG
TTTAATTAAATCATTGTCATTGGCAGTTGAGGACGGCAGCACTTACTCTCATACTCGTTGTGGTGTTCATTGTTGCCTTG
TCTTCCGTTGATGCTGCCCTTTCATACATTTTGTCCTGGCTACTTCGGAAATCTGCGTAGTTTACTGGTATGCTACTTGT
CCCTTTTTTTTAC-CAACTTCCTAGTCCAATGTGCATTTAGCCTCAGAATGCAGA---TGCATTGTTCCTCATATAAAGG
ATGTAATTATTTTTGGGATATGTCGGAATGCTATTATCAACTGACAACATGCTCCTCCCTCGAGTCCCTTCATGCTATTG
AATTGAGAGAGTAATAGCAAATGTGAATGCCTGATGATGTATTAATTTGTAAGGACCACATCAGTCAATGAACTGGGCGA
TACCATCTGTCATGCTGTTGAGTTGGCTGGC-GGTTATTCATTGATCAGCATGTATATGTTTATTATAAAACTCTGATTT
AGCAGAGCAAGATAGAAACAGCACCACAGCAGCAATTCAATCTCTTGTTGTTGCTTGTATACCATGCAGACCTGGCAAAA
ATTATGAAGGAGTAGATGATGCTATATAGACCAGAGGTGGGAAGGTGGTTAATGTCCCAGTATACCATGTTATCCTGAGT
GTTGAGAGAATCGAAAGGAATGCTCTGCAACTGACATTTGTTTGTCGCGAATGTATAATGTATTTATGCAGTTGCTTACT
ATGGTAGTTAAATGCTAATTATTTCTATTTGGTTGAGAAAGGAAAGAAGACAGAGTTACTCATTTGCCCCTAATTCTCTA
ATTCAAACTCTTATCTGTTTGTCGTCAGTTCTTGTTGAATGTGCTCCACCAGTGAGAATCTCAACTTGTTACGTTAAGAA
CTGTTTTCTTTTTCTTGTAAATGTATCGGCCCATATTCTGAGATCTGAAGAAATTTGCATTTGTTAGATGCTGAAATGTA
ACTGAGATATGTACTGGGGCAATCACAGCTTTTTCTTTCTCATGCACCTGCCAATTTGTATTAGAAGAACTGATTGCACC
CTGATCCATTGTTTTTTTTCCAGAAAAATTGCCCTGATTCGTCATATGTTTAAAGTGTGCAGGGAACCAATATAAAATGT
TTGGCTGCAGGCAAGCATCTATCTGGCAGTTATCGGCGTCATGGATCTGAATTTGGACTTTCTGTCTCATGGATCTGAAT
TTGGACTTTCTGTCTCATGGATATGAAACTACATAACCATTTCCTCTATAATGTTCCATAGTGGATGCAGATCTTTGGAG
AAATGAGGAGACGAAGATGGAGGAGATCGAGTTTTGCCGGAGACGAAGCGCTCGGGTCCTCACTGGAGCGAGCAGCCGGC
ATTCATCTTCCTCCAGGTTATCTCTCATGATCACATATTTTGTTGCATCATATCAACTGGGGTTGCCCTGAAATCTGAAT
CACAGGCTGCACCATGCGGTTCATGTTTATAATAGCGATAAAAATGCACTTCTTTATTGACACAACTCATGCGATGGGAC
CAAACATGACACAGAATCTGATTCACTGTGATGATTATTCATAGTTCTCATCTAATCAATTTGCTTCCGTCATTTCGTTC
GACAGAGCATATTCTTTAATGTCTGTATTCACAAGCACCATTCAGTTATAATGTTATATACATCCAAGCGGAATTGAGAA
ACATGGGAAGGTGGGAGGGAGAAAGCACAAATGCATTTTATGGCATGGACTCTGCCTTTTCTGCTCATAAAATAAGGGTA
CTGAAATCCACATGCATATTGCACAAGAGAAAGAACTAGAAACTACTGCAGAAGTAT-------TACATCCGTACATATA
TTTCGAACTATTTCTGCAAGGTTGCAACACACAAGCCAGTCACATAAATTATGACATTTGATATGGTACAAGTGATTACC
CCTAAACCACTCACTACATCTTTCGCCTAATCGTCTAAAAGAGCCATCAGCTCGGAACATCAATTTCAAACCCGAAACCA
AGTCAACCAACCTAGTGCTTACTAGTCAACAATACTAGCTATAGCTAAATACATGGCATCAGTAATGTACACACAAATGC
AAAAACTTCATAGCACACTGGTCCATTTACAATGCTAAGTACTTGGCAATTGACCCAATAGATTGACCTGGCAAAA----
>chr5A_960
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------T
-------------CCCAACGCTTTGGTTCGTTTCCAGCACACGGCCCAGTAACAGCAGGGCGGCCGGACCACCCCCACCG
CCGTCTCT--ACGCCCACGCGACGCCGGAGAACCTCGCAGCGCCGAACCGGAAAAGGACCGCGCGAGCGCCGCCTGGCTC
AGTGGCGTTCATCGCCGAGAGGCGAGAGCGCGTGCCGCGCGCAGCGGCGGAGGCTTTTCTCATCCCCCACCGCAGCTCCT
GAAACCCCAACCCTCTCTTCCGCCCAAGCTCCACGCGTCGAGAAATTCGGGGAGGATGTCTGGATTGGCCGCGAGCGCGC
TGCCCCTCGCCGCAGGTCCCAACCGCTCGCCGCGCCTACTGACGCCATGTCCGTGCTTATCTCCTTTTCCTAGCCAGATC
CTCACTTTCCGCCCGCGGTTTCCTTCGTTTCCAGGCCCGTCTCCGCTTCCGTGGTGCAGACCCACTCGACCCAGCGGCCT
AACGAGGCCTCCACTACTCAAGGTCGTAATTTCAATGGCGCCAGAATCATATTCCCTTGTTCTATTCTTCTTCTTCTGGT
TACTATGCTAGTGCTATA-----TATACATGGTTTGCGCTTACAGGTTGCGGAGCTGCAACCATGTCTTCTTGGCCGATT
CGCTTCGGCCAGACGGCCGAAATGTGCTGCGGCGTCGGGCAATGGGCGTCAGGGACTTCGCGCCAGCCAGTACCGGTTTG
ATGATGATGAGCCGCTGTGGCTTGCGGTGGTTAGAGAATTCGCTGTGTAAGTACAGATCTTGCTGACTTGCTCCCCCCTG
TTTGTGCTGTTCGACGATGAGATGAACTAGAATTGCCCTCTGTTATCAGGAGTGTGAGGAACTTGGTGGTTTTCTTGGCT
GAGCAGCCAGGGCAATTGAAGCACCTCGAATGGCCGGGCTTCCGCAATACGGTATGGCACTTGCATTTGTAGT---TTAT
TTCTTAGGTCGGTGTTATTCAGGTTCTGTTTTCATATATTCTTAACAGTGCAATCTATATTCCCTTGTGGCCCTATCAGC
TTACCGGTTAAGGAATGTGAACCTGTGAGGATATGTTGAGCTTGCTATATGTTTCAGGATGTGTTCTAAATTCTAACACA
TGATTTAGAGTGATGCAGTAGGTTGGTTTTAAGATTGCAGTGTGCATAGTTCATCCTCGACGAGTTTGCGTAGATAAACT
CTGAACCTTATAGGTTGAACCAACAGGAGTTAAAAGGTACTCCCTCCGTTCCAAAATAGATGACCCAACTTTATACTAAA
GTTAGTACTATAAAGTTGGGTCATCTATTTTGGAACGGAGGGGGTATTTATGTTCAATAAAGTAGTACT-----------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AAATTATGCC
CTTATCATGATTCCTTTCATTTTGTCCAATGTTCGTTCTCTATGAATCTTCTAGACTTCTAGTATCATATGCATACATCC
TAAATGCTAG------AGTAGCTCCTTGCTGTTTAGTATTTTAGTTGTTGGTCAGTTTGTTAGCACACCATATTATTTGA
TGTCTTGCTGCTTTTAGTCCGTTAAGATTTTTAAGTTGCTACATCATTGATGGCATCGCTACTTTGGAAACCGTTCTATG
TTTAATTAAATCATTGTCATTGGCAGTTGAGGACGGCAGCACTTACTCTCATACTCGTTGCGGTGTTCATTGTTGCCTTG
TCTTCCGTTGATGCTGCCCTTTCATACATTTTGTCCTGGCTACTTCGGAAATCTGCGTAGTTTACTGGTATGCTACTTGT
CCCTTTTATTTTTACAACTTCCTAGTCCATTGTGCATTTAGCCTCAGAATGCAGA---TGCATTGTTCCTCATATAAAGG
ATGTAATTATTTTTGGGATATGTCAGAATGCTATTATCAACTAACAACATGCTCCTCCCTTGAGTCCCTTCGTGCTATTA
AATTGTGAGAGTAATAGCAAATGTGAATGCCCGATGCTGTATTAATTTGTAAGGACCATATCGATCAATGAACTGGGCGA
TACCATCTGTCATGCTGTCAAGTTGGCTGACAAGTTATTCTTTGATCAGCATGTATATGTTTATTATATAACTCTGATTT
AGCAGAGCGAGATAGAAACAGCACTACGGCAGCAATTCAATCTCTTGTTGTTGCTTGTATACCATGCAGACCTGGC--AA
ATTATGAAGGAGCAGATGATGCTATACAGACCGGCGGTGGGAAGGTGGTTAATGTCCCAGTATACCATGTTATCCTGAGT
GTTGAGAGAATCGAAAGGAATGCTCTGCAACTGACATTTGTTTGTCGCGAATGTATAATGTATTTATGCAGTTGCTTGCT
ATGGTAGTTAAATGCTAATTATTTCTATTTGGTTGAGAAAGGAAAGAAGACAGAGTTATTCATTTGCCCCTAATTCTGTA
ATTCAAACTCTTATCTAGA--------------------------CCACCAGTGTGAATCCCAACTTGTTACGTTAAGAA
CTGTTCTCTATTTCTTGTAATTGTGTCGGTCCATATTCTGAGATCTGAAGAAATTTGCATTTCTTAGATGCTGAAATGTA
ACTGAGATATGTACTGAGGCAATCACAGCCTTTTCGTTCTCATGCATCTGCCAATTTGTATTAGAAGAACTGATTGCACC
CTGATCCAT--TTTTTTTTTCAGAAAAATCTCCCTGATTCGTCATACGTTTAAAGTGCGCAGAGCACCGATATAAAATGT
TTGGCTGCAGGCAAGCATCTGTCTGGCAGTTATCGGTGTCATTGT----------------------------TCTGAAT
TTGGACTTTCTGTCTAATGGATATGAAACTACATAACCATTTCCTCTATACAGTTCCATAGTGGATGCAGATCCTTGGAG
AAATGAGGAGACGAAGATGGAGGAGATCGAGTTTTGCCAGTGACGAAGCGCTCAGGTCCTCACCAGAGCGAGCAGCTGGC
ATTCATCTTCCTCCAGGTTATCTCTC---ATCACATATTTTGTTGCATCATATCAACTGGGGTTGCCCTGAAATCTGAAT
CACAGGCTGCACCATGCGGTTCATGTTTATAATAGCGATAAAAATGCACTGCTCGATTGACACAACTCATGGGATGGGAC
CACACATGACAAAGAATCTGATGCACTGTGATGATTATTCCTAGTTCTCATCTAATCAATTTGCTTCTGTCATGTTGTCC
GAAAGAGCATA-TCTTTAATGTCTGTATTCACAAGCACCATTCAGTTATAATGTTATATACATCCAAGCAGAATTGAGAA
GCACAGGATGGTCGGAGGGAG-AAGTACAGATGCATTTTATGGCATGGACTCTGCCTTTTCTGCTCACAAAATAAGGGTA
CTGAAATTCACATGCATATTGCACAAGAGAAAGAACTAGAAACTACTGCAGAAGTATGATATGTTACATCCGTACAAATA
TTTCAAACTATTTCTGCAAGGTTGCAACACACAAGCCAGTCACATAAATTATGACATTTGATATGGTACAAGTGATTACC
CCTAAACCACTCACTACATCTTTCACCTAATTATCTAAAAGAGCCATCAGCTCGAAACATCAATTTCAAACCCGAAATCA
AGTCAACCAACCCAGTGCTTACTAGTCAACAATACTAGCTATAGCTAAATACATGGCATCAGTAATGTACACACAAATGC
AAAAACTTCATAGCACACTGGTCCATTTACAATGCTAAGTACTTGGCAATTGACCCAATAGATTGACCTGCCAAAATAAT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS----------------S--SS--------S--S-------------------SSS--
--------------------------------S-----------------------------------------------
---------S----------------------------------------------------------------------
-------------S---------------------S--------------------------------------------
-S------------------------------------------------------------------------------
-----------------------S--S-------------------------------------------S---------
-----------------------------S--------------------------------------------------
------------------------------------------------------------------------S-------
------------------SSSSS-----------------------------------------------S---------
-----------------------S--S---------------------------------------------S-------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
---------S---------------------------S-------------------------------S----------
-------------------------------------S------S------------------------------S----
-S--------------------------------------------S--S-S----------------------------
----------------S--------------------------------------------S--S---------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S------------S----------------------------S-----
--SSSSSSSSSSSSSS--------S--------SS---------------------------------------------
---------------SSS-------------------------S---------------------------S--------
----S---------------------------------------------------------------------------
------S-------------------------------------------------------------------------
-----------------------------------------------------S-SSS----------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
---------------------------------------------------------------------------S----
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------SSS-------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
--------S-----------------------------------------------------------------------
------------------------------------------------S---------S---------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
-----------------------S---------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S--------------------S
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
S----S--------------------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
>forward_337
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-----------------------------------------------------------------------------TGC
CCCTCGTGTAAGCAAAT---------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1850
--------------------------------------------------------------------------------
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---------AGGCAATTGAAGCACCTCGA---------------------------------------------------
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>forward_541
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-----------------------------------------GTGCCTCACGTCGTAGGAAA-------------------
--------------------------------------------------------------------------------
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>reverse_2684
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-------------------------------------------CCATTCATGCCATGGCTACT-----------------
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>forward_542
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------------------------------------------TGCCTCACGTCGTAGGAAAG------------------
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>reverse_2807
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------ATTGATGCTGCCCTTTCATACA----------------------------------------------------
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>forward_849
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-----------------------------AACGCTCTCTCAACCCACTC-------------------------------
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>reverse_2936
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-------------------------------------------------------TCCTGCATTGTTCCTCATATAAAGG
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>forward_923
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-----------------------GCCTCCCGAGACTGTGAAAG-------------------------------------
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>reverse_3196
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---------------------------------------------------------------------------TATTT
AGCAGAGCAAGATAGAAACAGC----------------------------------------------------------
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>forward_1591
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---------------------------------------------------GAGCTGCAACCATGTCTTCC---------
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>reverse_3689
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--------GTGTACTGAGGCAATCACAGC---------------------------------------------------
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>forward_3395
--------------------------------------------------------------------------------
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---------------AGGAATGCTCTGCAACTGGT---------------------------------------------
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>reverse_4299
--------------------------------------------------------------------------------
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----------------------------------------------------------GTTTGCTTCCGTCATGTCGT--
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
