>input_sequence_18619
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--------------------------------------------------------------GCACAGCCCAGGAGGAGC
TAGCGGTAGCCGAGCTAGCTAAGCT------------ACGGTGCGCGCACGCGCTCGACCTCGCCATGCTGGAGAATCAG
AGCCAGGCGGAGGTAGGCGTCGCGTACCCTCTCGATCTGCTTTAG-CCGGCCCTAGCTAGCTTTGT---ATGTAGCTAAC
TTTGAACTGTGCATATGGTGGCGGCCAGGTTCTGTGGCCGAGGCTGGTGGCCAACAAGCTCTTCAGGAAGCCCTCCGGGA
GCCACGCCTTCGTCGCCGACTTCCCCGCGGCCGCCGGCGCCGCGGAGGAGGAGTTCGACGCGTGCGGCAGCCCCGACGCC
GACGCGCAGCGCTGCGTGAAGCGCCCGCGGCCGCAGCAGCGGAACAAGACGCTCAAGTACAGGTATGT--------GCGT
GCATGCATGTCTG----CTGGCTCAATCAGCCGCCACCAACCACCATGCTTAGGCTCTAGCTAGTAGATCATCATCATCA
CCCCAACTTGCGGCGTGGCGTGGAGTGCATGCTGGTTTTTCTTATTGTTGGCCGGCCACTGAGGGTTCATGGATCGATCG
ACCAGGCTGTTCGCCAGCACGTGGAACGTCGGCGGCGTGGCGCCACCGGACGACCTCGACCTGTCCGACTGGCTCGACAC
CAGGAACGGCACCTACGACATCTACGTCCTCGGGTACGTAGT----AATTACCAAGCGAGCAGTGACCTCGACGCTCATG
CGGCATAGGCTTGTGGATGCATGGTTAGTAACAAAATGGCATGTACGATCGGTGTGCAGATTTCAGGAGGTGGTGCCGCT
GAGAGCGCGGAACGTGCTGGGCGCGGACAAGAACCGCATCGGCATGCGGTGGAACGAGCTCGTGCGGGCCGCGCTGAACC
GGTCGTCGCCGTCGCCGTCGCCGGGCGCCACCGGGGGAGGGGAGAAGCAGAAGGTGCACCCGGTGAGGGACGGCGCCGGC
GGCCTGCAGTCGCGTGACTTCCGGTGCGTGGTGAGCAAGCAGATGGTGGGCATCCTGCTCACCGTCTGGGTCCGCGGCGA
TCTCCGCCGCTTCGTCCGCCGCCCCAGCGTCTCCTGCGTCGGCTGCGGCGTCATGGGCTGCCTCGGCAACAAGGTGCGTG
CGTGCATGCC----------------------------CGCGCGCTTGGGGAGTATACGA------GGATACATCGGACG
GCAACTAACAAAAGATTCAATTGTGTGCAGGGTGCCGTGTCCGTGAGGTTTTGGCTGCGTGACACGAGCTTCTGCTTCGT
GTGCTGCCACCTCGCGTCCGGCGGCAGGGAGGGCGACGAGGCGCACCGCAACGCCGATGCGGCGGAGATCCTCCGGCGGA
CGAGCTTCCCGCGGCGCCACTGCTCCTCCTCCTCCCCGTCGCTCGCCTCGCCCCACAAGATTCTAGATCACGAGTAAGTA
CATCGATCGTCCTGCACTAATTACCTTCGTGCGCTCCGTGCATGCCGCAAGTCGATCAAATCCGTTTGGTTTGCTGCCCA
AAAATGCTAGACGTACAGGCTTTTACAGGTTTCTATAGGCTCCGCCCAAACTTTCTAAACACACCCCCCCCCCCCTTCTT
AACCCTGATTTCAACGGGGGTGGGCCCGTGCCTCTACTAATGACCAATTAAAAACTACTACGACACCCTGTAAACCCCTC
ATCCCTGTAACATCCTGTACGTGTAGCAAACCTTGTTTGCTGCCCATGCTTAAGGATGGGCTGCCTATGGGTGC------
-ACACCCATTCCTCTCCCATAAGTAGTTTTGCCAAACAGTTGGCCAAAAAATTGGCAAGCCAACCCTTCCAACATTTATT
TTTAGGGTACCCTTCCAACATTTGGTAAGGCTAGCTAGAGAGGGCATCAGCCTGCAAAAAAAAATCAGTAGTAGTTCACT
AGTATGTACTCTCTTCGTTCCGAATTATTTGTCGTAGGTATGGATGTATCTAGATGTATTTTAGTTCTAGTTATATCTAT
TTCTGTGACGAGTAATTTGAAATATAAAATGCATCACATCGTACTGCCGGGTTTGTCGCCGTTGACCGGCCGAGTATTAA
GCGAGGGAAATATCAACGGCCGCCGTCCTTGCCGGTTACAGCCACGATTTCATCGAGCTCGCCACCGCGGTCGTTATCTT
ATCTTGTGGTTGCACCGCCCACGGCACCGGTAAATCAAGGGTAG----GTATTTGCCGTTCAACAGAGGGTTATACAACT
ATACATGCCAGCCAGTTTACCACTGTACACACGTATTGATCATGTCACGGCATGCACGTAGGCACGCACGACTAATAATA
TTAACT---ACTCCAGCAAGTAGCCAGAGTGAATGCGTCGTATCT-----------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TATTTTCTATGCCAGACCGGTGAATGTGATCTA
GGGAAGTAG---TATGAAATATCCTCTTAATAGCGACGGTAACTGCAAGTTTCCACAATCAGAATGCTTAATTTCACCGG
CCGGCGCCCGTGACAAAGACGGCTCGGAACCAAGTGGCGATCATGCATGCATGTTGATGCGGTAGACCTTGACCGGCCCG
GTGTGCCAGTATAGTTTCTTACTGTTTGTACTCTTGCGCAGCCGGGTGATTCTGCTCGGCGACCTCAACTATCGGATCTC
CCTGCCCGAGGCCAAGACCCGGTTGCTGGTGGAGCGGCACGACTGGAAGACCCTCCTCGAAAACGACCAGGTACAAATTC
AACCAGCACACAACGATCTAACTTTTTTTTTTGAGGATAAACGATCTAACTTATTATTATACAAAACACAAGGAAATTCA
AA-----ATTTCAAACTTTTAATAAAAACTTACGTGTGATTTGATTGTTCTTTTGTAGCTGCGGGGCGAGGTGTCGTCGG
AAGGAGGGACGTTCAAAGGGTGGAGCGAGGGGGCGATCACGTTCTCGCCGACGTACAAGTACCACCGGAACTCGGACGCC
TACTACGGCTGCGCGCAGCTGGGGAGGAAGGGCGACAAGCTGAAGCGGCGCGCGCCGGCGTGGTGCGACCGCGTGCTGTG
GCGCGGCGCCGGCCTGAGGCAGACCCGGTACGACCGGTGCGAGTCGCGGCTGTCGGACCACCGCCCCGTGCGCGCCGCCT
TCTCCGTCGAGGTGGACGCGCCGTGGAACCTCAACTCCCTCCGGAGCTTCTTCCTGTCCGAGCGGTTCGACGACCGGGCC
AAGGGCCCCGCCGACGGCCTGTTCCTGCTCCGGGAGGACGACCACACGACCACCAGCGCGAGATACGCCGAGGATGTTTG
AGCCTTTGAGACATGCAATTGCAATGGCTGTGCACAAACGAAAGAGAGAGTACATAAAATCATTTTCGTCGATAGTACGT
TCAGTAGTAAAGATCCATCCTCC--ATCTGTTCTGTTTCTTCTGATC--AGTGTCCATACATGTCTACAGCACAAGCTAG
GATACGGATGCAATTTTCCCCCACACCCTGTCCCTGACTTCCTGTAAATTACAGCAGAGTAGTACCATAGATTGCACTCT
TGCTGATGCAGTGAGAGTTGTCCCGACCCGAAACTTGTTTGGCCGGACTAGCGACGAGTTGTCGCTG-TAA--ATCCTAC
GAGGAAATACGGGACTTTGTCGCCATGAACAAGTGCAGATAGGCT---------------GAATGAATGGCACCTTTCTA
C-------------------------------------------------------------------------------
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---------------------------------------------------
>chr4A_1_TraesCS4A01G073900
AAAAAGAAAATCTGAAAATATTTTTTGTCCGGATCTCAATGTATGCTCACTAATATAGCATCGACTGAGACATAATCAAG
TTTCAATTGACTGAGACTTAACAAGACTATTTTTCTATTATTGTGGTTGAGCTCGCAGATCACAACCCCAAGATCTTGCT
TCTTGGACTATTGGCAGCGGCTCTA-----CTTGTCATAGCAACGAAGCGCAGAAGCGCTTCCAATTTTTATGCATATAC
ACATTTTTAAT-------ATAAAAGGGACATATTATATCAAGGAGATGTTAATTAAACATGTGTAACAATGAGATCTCAA
AAGCTATTAAAAGCATCGACAACCTATATGTAACTATATATAACCTGCTGACAAAAACTACACTTGTAAAAATAACATCG
GTCCCACAAAGCTTATAACTGGACAATAAATTACCAGAACACTACCAGACTGGAACCTTTTTCCTAACCCCAAACAAAAG
CACACCGAAAACGATCAAGAACAACTCTCCGAACGAAGCTGACAGTCACTAGTCAGCAGGCGTTGGATGGACTCACTGTC
GTGGCAACAGCACACCAGTGCCTCAGCTGGACATAGGAGTTTTGCTAGCATGCACCACGGCCAGCCAGCGTACGCCAGTC
CACCACAACTGTGGCTGATGGCTGAATGAGCAGCTTCTCACCGGCCCGTTGGTCCCCCGGAAAAATCTAGTTTATCTTCA
CCTCACCGTGATCCCACACCTCTTTGACCGCCTAGAGATCGAGGCTCAAAAGGCGGCTTTTATCCCCACTGTCACGGCCA
CCGATCCTCCCCCTT-CTTCCCGT-CTCGCGTCACCGCATCGGGCACCATGCAGTGCGAGGCGTACACTGATCGACATCC
GGTCACATCCACCCC-GCGCAGTGGCAGGACTTGTCTATTGGCTCCCCGTCGCCTAGCGTCCCGATCGCGGCCTATTTAA
G-CCCGCTTTGCCTACCCCGTCCAACGTTTCCCTCCCCTCCGTCCCACTTTACCT------AGCACAGCCCAGGAGGAGC
TAGCGGTAGCCGAGCTAGCTAAGCT------------ACGGTGCGCGCACGCGCTCGACCTCGCCATGCTGGAGAATCAG
AGCCAGGCGGAGGTAGGCGTCGCGTACCCTCTCGATCTGCTTTAG-CCGGCCCTAGCTAGCTTTGT---ATGTAGCTAAC
TTTGAACTGTGCATATGGTGGCGGCCAGGTTCTGTGGCCGAGGCTGGTGGCCAACAAGCTCTTCAGGAAGCCCTCCGGGA
GCCACGCCTTCGTCGCCGACTTCCCCGCGGCCGCCGGCGCCGCGGAGGAGGAGTTCGACGCGTGCGGCAGCCCCGACGCC
GACGCGCAGCGCTGCGTGAAGCGCCCGCGGCCGCAGCAGCGGAACAAGACGCTCAAGTACAGGTATGT--------GCGT
GCATGCATGTCTG----CTGGCTCAATCAGCCGCCACCAACCACCATGCTTAGGCTCTAGCTAGTAGATCATCATCATCA
CCCCAACTTGCGGCGTGGCGTGGAGTGCATGCTGGTTTTTCTTATTGTTGGCCGGCCACTGAGGGTTCATGGATCGATCG
ACCAGGCTGTTCGCCAGCACGTGGAACGTCGGCGGCGTGGCGCCACCGGACGACCTCGACCTGTCCGACTGGCTCGACAC
CAGGAACGGCACCTACGACATCTACGTCCTCGGGTACGTAGT----AATTACCAAGCGAGCAGTGACCTCGACGCTCATG
CGGCATAGGCTTGTGGATGCATGGTTAGTAACAAAATGGCATGTACGATCGGTGTGCAGATTTCAGGAGGTGGTGCCGCT
GAGAGCGCGGAACGTGCTGGGCGCGGACAAGAACCGCATCGGCATGCGGTGGAACGAGCTCGTGCGGGCCGCGCTGAACC
GGTCGTCGCCGTCGCCGTCGCCGGGCGCCACCGGGGGAGGGGAGAAGCAGAAGGTGCACCCGGTGAGGGACGGCGCCGGC
GGCCTGCAGTCGCGTGACTTCCGGTGCGTGGTGAGCAAGCAGATGGTGGGCATCCTGCTCACCGTCTGGGTCCGCGGCGA
TCTCCGCCGCTTCGTCCGCCGCCCCAGCGTCTCCTGCGTCGGCTGCGGCGTCATGGGCTGCCTCGGCAACAAGGTGCGTG
CGTGCATGCC----------------------------CGCGCGCTTGGGGAGTATACGA------GGATACATCGGACG
GCAACTAACAAAAGATTCAATTGTGTGCAGGGTGCCGTGTCCGTGAGGTTTTGGCTGCGTGACACGAGCTTCTGCTTCGT
GTGCTGCCACCTCGCGTCCGGCGGCAGGGAGGGCGACGAGGCGCACCGCAACGCCGATGCGGCGGAGATCCTCCGGCGGA
CGAGCTTCCCGCGGCGCCACTGCTCCTCCTCCTCCCCGTCGCTCGCCTCGCCCCACAAGATTCTAGATCACGAGTAAGTA
CATCGATCGTCCTGCACTAATTACCTTCGTGCGCTCCGTGCATGCCGCAAGTCGATCAAATCCGTTTGGTTTGCTGCCCA
AAAATGCTAGACGTACAGGCTTTTACAGGTTTCTATAGGCTCCGCCCAAACTTTCTAAACACACCCCCCCCCCCCTTCTT
AACCCTGATTTCAACGGGGGTGGGCCCGTGCCTCTACTAATGACCAATTAAAAACTACTACGACACCCTGTAAACCCCTC
ATCCCTGTAACATCCTGTACGTGTAGCAAACCTTGTTTGCTGCCCATGCTTAAGGATGGGCTGCCTATGGGTGC------
-ACACCCATTCCTCTCCCATAAGTAGTTTTGCCAAACAGTTGGCCAAAAAATTGGCAAGCCAACCCTTCCAACATTTATT
TTTAGGGTACCCTTCCAACATTTGGTAAGGCTAGCTAGAGAGGGCATCAGCCTGCAAAAAAAAATCAGTAGTAGTTCACT
AGTATGTACTCTCTTCGTTCCGAATTATTTGTCGTAGGTATGGATGTATCTAGATGTATTTTAGTTCTAGTTATATCTAT
TTCTGTGACGAGTAATTTGAAATATAAAATGCATCACATCGTACTGCCGGGTTTGTCGCCGTTGACCGGCCGAGTATTAA
GCGAGGGAAATATCAACGGCCGCCGTCCTTGCCGGTTACAGCCACGATTTCATCGAGCTCGCCACCGCGGTCGTTATCTT
ATCTTGTGGTTGCACCGCCCACGGCACCGGTAAATCAAGGGTAG----GTATTTGCCGTTCAACAGAGGGTTATACAACT
ATACATGCCAGCCAGTTTACCACTGTACACACGTATTGATCATGTCACGGCATGCACGTAGGCACGCACGACTAATAATA
TTAACT---ACTCCAGCAAGTAGCCAGAGTGAATGCGTCGTATCT-----------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TATTTTCTATGCCAGACCGGTGAATGTGATCTA
GGGAAGTAG---TATGAAATATCCTCTTAATAGCGACGGTAACTGCAAGTTTCCACAATCAGAATGCTTAATTTCACCGG
CCGGCGCCCGTGACAAAGACGGCTCGGAACCAAGTGGCGATCATGCATGCATGTTGATGCGGTAGACCTTGACCGGCCCG
GTGTGCCAGTATAGTTTCTTACTGTTTGTACTCTTGCGCAGCCGGGTGATTCTGCTCGGCGACCTCAACTATCGGATCTC
CCTGCCCGAGGCCAAGACCCGGTTGCTGGTGGAGCGGCACGACTGGAAGACCCTCCTCGAAAACGACCAGGTACAAATTC
AACCAGCACACAACGATCTAACTTTTTTTTTTGAGGATAAACGATCTAACTTATTATTATACAAAACACAAGGAAATTCA
AA-----ATTTCAAACTTTTAATAAAAACTTACGTGTGATTTGATTGTTCTTTTGTAGCTGCGGGGCGAGGTGTCGTCGG
AAGGAGGGACGTTCAAAGGGTGGAGCGAGGGGGCGATCACGTTCTCGCCGACGTACAAGTACCACCGGAACTCGGACGCC
TACTACGGCTGCGCGCAGCTGGGGAGGAAGGGCGACAAGCTGAAGCGGCGCGCGCCGGCGTGGTGCGACCGCGTGCTGTG
GCGCGGCGCCGGCCTGAGGCAGACCCGGTACGACCGGTGCGAGTCGCGGCTGTCGGACCACCGCCCCGTGCGCGCCGCCT
TCTCCGTCGAGGTGGACGCGCCGTGGAACCTCAACTCCCTCCGGAGCTTCTTCCTGTCCGAGCGGTTCGACGACCGGGCC
AAGGGCCCCGCCGACGGCCTGTTCCTGCTCCGGGAGGACGACCACACGACCACCAGCGCGAGATACGCCGAGGATGTTTG
AGCCTTTGAGACATGCAATTGCAATGGCTGTGCACAAACGAAAGAGAGAGTACATAAAATCATTTTCGTCGATAGTACGT
TCAGTAGTAAAGATCCATCCTCC--ATCTGTTCTGTTTCTTCTGATC--AGTGTCCATACATGTCTACAGCACAAGCTAG
GATACGGATGCAATTTTCCCCCACACCCTGTCCCTGACTTCCTGTAAATTACAGCAGAGTAGTACCATAGATTGCACTCT
TGCTGATGCAGTGAGAGTTGTCCCGACCCGAAACTTGTTTGGCCGGACTAGCGACGAGTTGTCGCTG-TAA--ATCCTAC
GAGGAAATACGGGACTTTGTCGCCATGAACAAGTGCAGATAGGCT---------------GAATGAATGGCACCTTTCTA
CATACAGTATACCTACGAGTAGCATACATGTGTTTTTCCACCCCGTTCCTGACTTTACGCACCTGCATTTTGTACTCTTC
TTGATCCAATGAGCTGTCCCAAACTTGTCCAGCAACGAGTTGTCGCTGTAACAAGTAGTGCGCGGACGGGATCCGATTCG
ACCGGTGGCCATAAACAAGTGCAGATAGGCCATGAACGGCGCTTTTCTATTGGGCATGTGGGAGTAGATTAAACTCCAAA
AGGCTTGTCACCAAGCATTGTCAACCTCTAATCACAATATCTCAC-----GCTTGCTTTCTACTATCTCTCTGCGTGTGT
GTTGTGTAGTGTTACATACAACAGTATCCTCCATTAGAAAAAGTGCTACGGCGGCACTGTCATGGGCCATGGCACTCGGT
CACTGCACACTAGCGTAGCGGCGGTCGCATTCCAGCAGCCCAAATTCAAGGGCTCTGTTGAGATCGTCTGCCCCCCCTTG
TTGTTTCTTGTTCTCTGCCGCTTGTTCCTTCTCCTTGTCAGCATTGCGCGGAGCGGATGAAGTGCATCCAAGGATCAGGT
TGCTGTCGCCAAATTGCCCAATTTGCCATGCAAGTTGCGACGATCTTGCATAGCTGCGAGGCAACGGCCGATCATCTTGC
GCGTGCCCGTCGTCGGCGTCGGGCCACATGTG-TTTTTCTGTATTCTGCATGATTGTATGGTGTGGAGTGACTAATGTAT
TTGTGGCTCCGGTTTAATTTTGGTGGCCGGTCGGGTCAGGTGAAATAAATCCATTGAGATATGCAAATGA---TTCAAGG
CTCACAATGTGACAACGTTTGAAAATTG-GTCTTGGTGCGAAGAAGCCCGAACTCGGGGGCTGATCGGAATGCATGTGTG
AACACTTGACCATGCTCGTGAATAGTACGTGTTGTCGTCTACTCCTAAAGAAATTTCGTCACTGCAATGCAATCTGATTA
ATGTATTGGGATTAGTCCTAAACAAGGGCATCCCTCAAGATTCTTTCCGGC
>chr4B_106
ACC-----------------------------------------------------------------------------
----------------------------ATTTTTCTATTATTGTAGTTGAGCTCGCGGATGACAACCTCGAGATTTTGCT
TCTTGGACCATTGACAGCGGCCCTGCCCTGCTTGTCATAGCAATGAAGCGTAGAAGCGCTTACAGTTTTTATGCACATCT
ATACACTTTTTGTTATTGATAAAAGGGGCATATTATATCAAGGAGATGTTAATTAAACATGTGCAACAATGAGATCTCAA
AAGGTATTCAAAACATCGAGAATGTACATGTAGCTATATATAACCTTCTGAGAAAAACTACACTTGTAAAAATAATATTG
GTCCGGCAAAGCT--TAACTAGCCAATAAATTCCCAGAACATTACCATACTGGAACCTTTTTCCTAACCCCAAGCAAAAG
CACACCGAAAACGATCAAGAGCAACTCTCCAAACGAAGCTGACAGTCACTAGTTAGTAGGCGTTGGATGGACTCGCTTTC
GTGGCAATAGCACACCGGTGTCTTAGCTGGACATAGGAGTTTTGCTAGTATGCACCAGAGCCAGCCAGTGTACGCCAGTC
CACCACAACTGCTGT-----------TGAACAGCTTCTCACCGGCCCGTTGGTCCCCG-GAAAAATCTAGTTTATCT---
--TCACCGTGATCCCACTCCTCTTTGACCACCTAGAGATCAAGGTTCAAAAGGCGGCTTTTATTCCCACTGTCACGGCCA
CCGGTCCTCCCCCTTTCTTCCCTGCCTCGCGTCACTGCATCAGGCACCATGCAGTGCAAGGCGTACACTGATCGACATCC
GGTCACATCCAGCCCCGCGTAGTGGCACGATTTGTCTATTGGCTCCCCGTCGCGTAGCGTCC----CGCGGCCTATTTAA
GCCCCGCTTTGCCTACCCCGTCCAACGTTTCCCTCCCTTCCATTCCACTTTACTTAGCACAA-------CCAGGAGGACC
TAGCGATAGCTAAGCTAGCTAAGCTACCCTACTGGCCACGGTGCGCGCACGCGCTCT--CTCACCATGCTGGAGAATCAG
AGCCAGGCGGAGGTAGGCATCACGTACCCTCTCGATCCGCTTTACCCCGGCCCTAGCTAGCTTTGTAGCATGTAGCTAAC
TTTGCTCTGTGCATATGGTGGCGGCCAGGTTCTCTGGCCGAGGCTGGTGGCCAACAAGCTCTTCAGGAAGCCCTCCGGGA
GCCACGCCTTCGTCGCCGACTTCCCGGCGGCCGCCGGCGCCGCGGAGGAGGAGTTCGACGGGTGC---AGCCCCGACGCC
GACGCGCAGCGGTGCGTAAAGCGGCCGCGGCCGCAGCAGCGGAACAAGACGCTCAAGTACAGGTATGTGCGTGCGTGCAT
GCATACATGTCTGTGTGCTAACTCAATCAGAGACCGCCAACCACCATGCTTAGGCTCTG----GTAGATCATCATCATCA
TCCCAACTTGCGCCGTGGCGTGGAG----TGCTGGTTTTTCTTATTGTTAATCGGCCACTGAGCGCTCATGGATCGATCC
ACCAGGCTGTTCGCGAGCACGTGGAACGTCGGCGGCGTGGCGCCACCGGACGACCTCGACCTGTCCGACTGGCTCGACAC
CAGGAACGGCACCTACGACATCTACGTCCTCGGGTACGTACT----AATTACCAAGCGAGCAGTGACCTCGACGCTCATG
CGGCATAGGCTTGTGGATGCATGGTTAGTAACAAAATGGC-----------GTGTGCAGATTTCAGGAGGTGGTGCCGCT
GAGAGCGCGGAACGTGCTGGGCGCGGACAAGAACCGCATCGGCATGCGGTGGAACGAGCTCGTGCGGGCCGCGCTGAACC
GGTCGTCGCCGTCGCCGTCACCGGGCGCCACCGGGGGAGGGGAGAAGCAGAAGGTGCACCCGGTGAGGGACGGCACCGGA
GGCCTGCAGTCGCGTGACTTCCGGTGCGTGGTGAGCAAGCAGATGGTGGGCATCCTGCTCACCGTCTGGGTCCGCGGCGA
CCTCCGCCGCTTCGTCCGCCGCCCCAGCGTCTCCTGCGTCGGCTGCGGCGTCATGGGCTGCCTCGGCAACAAGGTGCGTG
CGTGCATGCCCTACCCTACGTGCATACAGACAGACATGCGCGCGCTTGGGGAGTATACGAATACGAGGATACATCGGAAG
GCAACTGACATAAGGTTCAACTCTGCGCAGGGTGCTGTGTCCGTGAGGTTTTGGCTGCGTGACACGAGCTTCTGCTTCGT
GTGCTGCCACCTCGCGTCCGGCGGCAGGGAGGGCGACGAGGCGCACCGCAACGCCGACGCCGCGGAGATCCTCCGGCGGA
CGAGCTTCCCGCGGCGCCACTGCTCCTCCTCCTCCCCGTCACTCGCCACGCCCCACAAGATTCTAGATCACGAGTAAGTA
CATCGCCCTGCATTATT--------TTCGTGCGCTCCGTGCATGCCGCAAGTCGATGAAGTCCGTTTG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GTTTGCTGCCCATGCCAAAGAATGGGCTGCCTATGGGTAATGGGTG
TACACCCATTCCTCTCACATAAGTATTTTTGCCAAACAGTTGGCCAAAAAATTGGCAAGCCAACACTTG-----------
--------------CCAGCATTTCGTAAGTT----TAGAGGGGGCATCAGCCTGCAAAAAAACTC----AGCTGTACACT
AGTTGAACGTAC--------------------------------------------------------------------
----------------------TATAGAATGCATCACATCGCACTGCCGGTTTTGTCGCCGTTGACCGGCCGAATATTAA
GCGACGGAAATATCAACGGCCGCCGTCCTTGCCGGTTACAGCCACGATTTGATCGAGCTCACCACCGCGGTCGTTATCTT
ATCCGGTGGTTGCACCGTCCACGGCACCGGTAAATCAAGGGCAGATACGTATTTGCCGTTCAGCATCGGGTTACTTGCCA
GCCA--GCCAGCCAGTTTACCACTGTACGCACGTATTGATCATGTCACGGCATGCACGTAGGCACGCACGACAAATAGTA
CTATTAAGCACTCGAGCAAGTAGCCAGAGTGAATGCGTCGGATCTACTCCCTCCGTTCTAAATATAAGTCTTTTTAGTGG
TTTCAAATAAACTACAACACATGGATGTATATAGACATATTTTAGAGTGTAAACTTACTCATTTTGCTTTGTATGTAGTC
CCTTGTTAAAATCTCTAAAAAAAATTTATATTTAGGAACGGAGGGAGTATTTTCTATGCCAGACCGGTGATGTAGGGAAG
TA---GTAGGAGTATGAAATATCCACTTAATGGCGACGGTAACCGCAAGTTTCCACAATCAGAATGCTTAATTTCACTGG
CCGGCGCCCGTGACAAAGACGGCTCGGAACCAAGTGGTGATCATGCATGCATGTTGATGCGGTAGACCTTGACCGGCCTG
GTGTGCCAGTATAGTTTCTTACTGTTTGTACTCTTGCGCAGCCGGGTGATCCTGCTTGGGGACCTCAACTATCGGATCTC
CCTGCCCGAGGCCAAGACCCGGTTGCTGGTCGAGAGGCACGACTGGAAGACCCTCCTGGACAACGACCAGGTACGAATTC
AACCAGCAGACAATGATCTAACTTAC-------------------------------TATACAAAACACGAGGAAATTCA
AATTTCAAACTTTG----------AAAACTCATGGGCGATTTGATTGTTCGTTTGCAGCTGCGGGGCGAGGTGTCGTCGG
AAGGAGGGACGTTCAACGGGTGGAACGAGGGGGCGATCACGTTCTCGCCGACGTACAAGTACCACCGGAACTCGGACGCC
TACTACGGCTGCTCCCAGCTGGGGAAGAAGGGCGACAAGCTGAAGCGGCGCGCGCCGGCGTGGTGCGACCGCGTGCTGTG
GCGCGGCGCGGGCCTGAGGCAGACCCGGTACGACCGGTGCGAGTCGCGGCTGTCGGACCACCGCCCCGTGCGCGCCGCCT
TCGCCGTCGAGGTGGACGCGCCGTGGAACCTCAACTCCCTCCGGAGCTTCTTCCTGTCCGAGCGGTTCGACGACCGGGCG
AAGAGCCCGGCCGACGGCCTGTTCCTGCTCCGGGAGGACGACCACACGACCACCAGCGCGAGATACGCCGAGGATGTTTG
AGCCTTTGAGACA------TGCAATGGCTGTACACAAACGAA--AGAGAGTACATAAAATCATTTTCGTCGATAGTATAC
---GTAGTAAAGATCCATCCTCTCGATCTGTTCTGTCTATTCT-----GAGTGTCCATACATGTCTACAGCACAAGCTAG
GATACGGATGCAATTTTCCCCCACACCCTGTCCCTGACTTCCTGTAAATTACAGTACAGTGGTACAGTAGATCGCACTCT
TGTTGATGCAGTGAGT-TTGTCCCGACCCAAAACTTGTTTGGCCGGACTAGTGACGAGTTGTCGCTG-TAAAAATCCTAC
GAGGAAATATGGGGCTTTGTCGCCATGAACAACCTTCATACATCAGTTGGAGTGATGTACGAATGAGTGGTACCTTTCTG
----CAGTACACCTAGGGGTAGCGTACATGTGTTTTTCCACCCCGTTCCTGACTTTATGCACCTACATTTTGTACTCTTC
TTGATCCAATGAGCTGTCTCAAACTTGTCCAGCAACGAGTTGTCGCTGTAA---GTAGTGCGCGGACGGGATCCGATTCG
ACCGGTGGCCATAAACAACTGCAGATAGGCCAGGAACGGCGCTTTTCTATTGGGCATGTGGGAGTAGATTAAAATCCAAA
GGGCTTGTCACCAAGCATTGTCAACCTCTAATCACAATATCTCAG-----GATTGGTTTCATCCCTCTCAGCATGCGTCC
GTAGTGTACATGC-------ACAGTATTCTCCATTAGAAAAAGTGCCGCGGTGACACTGTCATGGGCCATGGCACTCGGT
CACTGCACACTAGC-----GGTGGTCGCATTCCAGCAGCCCAAATTCATGGGCTCTGTTAAGATTGTCTGCCCCCCTTG-
-------GTGTTCTCTGCTGCTTGTTCCTTCTGCTTGTCAGCATTGTGCAGAGCGGATGAAGTGCACCCAAGGATAAGGT
TGCTGTCGCCAATTTGCCCAATTTGCCCTGCAAGTTGCGATGATCTTGCATAGCTGCGAGGCAACGGCCGATGATCTTGC
GCGTACCTGTCATCGGCATCGGGCCACATGTATTTTTTTTCTATTCTGTATGATTGTATGGTGTGGTGTGACCAATGTAT
TTGTGGTTGCGGTTTAATTTTGGTGGCCGGTCGGGTCAGGTAAAATCAATTCATTAAGATATG------------CAAGG
CTCACAATGTGACAACATTTGAAAATTTAGTCTTGGTGCGAAGAAGCCCGAACTCGGGGGTTGATCAGAATGCATGTGTG
AACACTTGACCATCCTCGTGAATAGTACGCGTTGTCGTCTACTCCTAAAGAAATCTCGTCGCTGCAATGCAGTCTGATTA
ATGTATGG---TCAGTCCTAAACAAGGGCAGCCCTGAAGATTCTTTCCGGC
>chr4D_416
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AAATTCCCAGAACACTACCAGACTGGAACCCTTTTCCTAACCCCAAACAAAAG
CACACTGAAAACGATCAAGAGCAACTCTCCAAACGAAGCTGACAGTCACTAGTCAGTAGGCGTTGGATGGACTCACTTTC
GCGGCAACAGCACACCAGTGCCTTAGCTGGACATAGGAGTTTTGCTAGCATGCACCAGAGCCAGCCAGCGTACGCCAGTC
CACCACAACTGTGGCTGA-------ATGAGCAGCTTCTCTCCGGCCCGTTGGTCCCCC-GAAAAATCTAGTTTATCTTCA
CCTCACCGTGATCCCACTCCTCTTTGACCACCTAGAGATCGAGGCTCAAAAGGCGGCTTTTATCCCCACTGTCACCGCGA
CCGATCCTCCCCCTTTCTTCCCGT-CTCCCGTCACCGCATCGGGCACCATGCAGTGCAAGGCGTACACTGATCGACATCC
GGTCACATCCACCCAAGCGTAGTGGCACGATTTGTCTATTGGCTCCCCGTCGCGTAGCGTCCCGATCGCGGCCTATTTAA
G-CCCGCTTTGCCTACCCCGTCCAACGTTTCCCTCCCCTCCATTCCACTTTACTTAGCACAAGCACAGCCCAGGAGGACC
TAGCGATAGCTAAGCTAGC---------CTGCTGGCCACGGTGCGTGCACGCGCTCGACCTCACCATGCTGGAGAATCAG
AGCCAGGCGGAGGTAGGCATCACGTACCCTCTCGATCCGCTTTATCCCGGCCCTAGCTAGCTTTGGAGCATGTAGCTAAC
TTTGCTCTGTGCATATGGTGGCGGACAGGTTCTGTGGCCGAGGCTGGTGGCCAACAAGCTCTTCAGGAAGCCCTCCGGGA
GCCACGCCTTCGTCGCCGACTTCCCGGCGGCCGCCGGCGCCGCGGAGGAGGAGTTCGACGGGTGCGGCAGCCCCGACGCC
GACGCGCAGCGCTGCGTGAAGCGCCCGCGGCCGCAGCAGCGGAACAAGACGCTCAAGTACAGGTATGTGCGTGCGTGCAT
GCATACATGTCTGTCTGCTAGCTCAATCAGCGACCACCAACCGCCATGCTTAGGCTCTAGCTAGTAGTAGATCATCATCA
CCCCAACTTGCGTCGTGGCGGGGAGTGCATGCTGGTTTTTCTTATTGTTGGCCGGCCACTGAGCGTTCATGGATCGATCC
ACCAGGCTGTTCGCGAGCACGTGGAACGTCGGCGGCGTGGCGCCACCGGACGACCTCGACCTGTCCGACTGGCTCGACAC
CAGGAACGGCACCTACGACATCTACGTCCTCGGGTACGTACGTAGAAATTACCAAGCGAGCAGTGACCTCGACGCTCATG
CGGCATAGGCTTGTGGATGCATGGTTAGTAACAAGATGGC-----------ATGCGCAGATTTCAGGAGGTGGTGCCGCT
GAGAGCGCGGAACGTGCTGGGCGCGGACAAGAACCGCATCGGCATGCGGTGGAACGAGCTGGTGCGGGCCGCGCTGAACC
GGTCGTCGCCGTCGCCGTCGCCGGGCGCCACCGGGGGAGGGGAGAAGCAGAAGGTGCACCCGGTGAGGGACGGCGCCGGC
GGCCTGCAGTCGCGTGACTTCCGGTGCGTGGTGAGCAAGCAGATGGTGGGCATCCTGCTCACCGTCTGGGTCCGCGGCGA
CCTCCGCCGCTTCGTCCGCCGCCCCAGCGTCTCCTGCGTCGGCTGCGGCGTCATGGGCTGCCTCGGCAACAAGGTGCGTG
CGTGCATGCCCTACCCTACGTGCATACAGACAGACATGCGCGCGCTTGGGGAGTATACGAATACGAGGATACATCGG-CG
GCAACTAACATGAGATTCAACTCTGTGCAGGGCGCCGTGTCCGTGAGGTTTTGGCTGCGTGACACGAGCTTCTGCTTCGT
GTGCTGCCACCTCGCGTCCGGCGGCAGGGAGGGCGACGAGGCGCACCGCAACGCCGACGCCGCGGAGATCCTCCGGCGGA
CGAGCTTCCCGCGGCGCCACTGCTCCTCCTCCTCCCCGTCACTCGCCACGCCCCACAAGATTCTAGATCACGAGTAAGTA
CATCGCCCAGCATTATT--------TTCGTGCG---------TGCCGCAAGTCGATCAAGTCCGTTTG------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GTTTGCTGCCCATGCCAAAGAATGGGCTGCCTATGGGTAATGGGCG
TACACCCATTCCTCTCACATAAGTATATTTGCCAAACAGTTGGCCAAAAAATTGGCAAGCCCACCCTTG-----------
--------------CCAACATTTGGTAAGGC----TGGAGAGGGCATCAGCCTGCAAAAAAAATC----AGCAGTACACT
AGTAGAACGTAC--------------------------------------------------------------------
----------------------TATAGAATGCATCACATCGTACTGCCGGTTTTGTCGCCGTTGACCGGCCGAGTATTAA
GCGAGGGAAATATCAACGGCCGCCGTCCTTGCCGGTTACAGCCACGATTTGATCGAGCTCACCACCGCGGTCGTTGTCTT
ATCCGGTGGTTGCACCGTCCACGGCACCGGTAAATCAAGGGCAG----GTATTTGCCGTTCAGCATCGGGTTACTTGCCA
GCCA--GCCA----GTTTACCGCTGTACACACGTATTGATCATGTCACTGCATGCACGTAGGCACGCACGACTAATAATA
TTAACT---ACTCCAGCAAGTAGCCAGAGTGAATGCGTCGTATCT-----------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TATTTTCTATGCCAGACCGGTGATCCAGGGAAG
TG---GTAG---TATGAAATATCCTCTTAATAGCGACGGTAACTGCAAGTTTCCACAATCAGAATGCTTAATTTCACCGG
CCGGCGCCCCTGACAAAGACGGCTCGGGACCAAGTGGTGATCATGCATGCATGCTGATGCGGTAGACCTTGACCGGCCCG
GTGTGCCAGTATAGTTTCTTACTGTTTGTACTCTTGCGCAGCCGGGTGATCCTGCTTGGCGACCTCAACTATCGGATCTC
CCTGCCCGAGGCCAAGACGAGGCTGCTGGTGGAGCGGCACGACTGGAAGACGCTCCTGGACAACGACCAGGTACAAATTC
AACCAGCACACAACTATCCAACTTAT---------------------------------TACAAAACACGAGGAAATTCA
AATTCAAATTTCAAACTTTTAGTAAAAACTTATGGGTGATTTGGTTGTTCTTTTGCAGCTGCGGGGCGAGGTGTCGTCGG
AAGGAGGGACGTTCAACGGGTGGAACGAGGGGGCGATCACGTTCTCGCCGACGTACAAGTACCACCGGAACTCGGACGCC
TACTACGGCTGCGCGCAGCTGGGGAGTAAGGGCGACAAGCTGAAGCGGCGCGCGCCGGCGTGGTGCGACCGCGTGCTGTG
GCGCGGCGCGGGCCTGAGGCAGACCCGGTACGACCGGTGCGAGTCGCGGCTGTCGGACCACCGCCCCGTGCGCGCCGCCT
TCGCCGTCGAGGTGGACGCGCCGTGGAACCTCAACTCCCTCCGGAGCTTCTTCCTGTCCGAGCGGTTCGACGACCGGGCC
AAGGGCCCGGCCGACGGCCTGTTCCTGCTCCGGGAGGACGACCACACGGCCGCCAGCGCCAGATACGCCGAGGATGTTTG
AGCCTTTGAGACA------TGCAATGGCTGTGCACAAACAAA--AGAGAGTACATAAAATCATTTTCGTCGATAGTACGT
ACAGTAGTAAAGATCCATCCTCC--ATCTGTTCTGTTTCTTCTGATCAGAGTGTCCATACATGTCTACAGCACAAGCTAG
GATACGGACGCAATTTTTCCCCACACCCTGTCCCTGACTTCCTGTAAATTACAGTACAGTAGTACAGTAGATCGCACTCT
TGTTGATGCAGTGAGAGTTGTCCCGACCCGAAACTTGTTTGGCCGGACTAGCGACGAGTTGTCGCTGCTAA--ATCCTGC
GAGGAAATATGGGACTTTGTCGCCATGAGCAACCTTCATATATCAGT-----TGATGTACGAATGAGTGGTACCTTTCTG
----CAGTACACCTAGGGGTAGCGTACATGTGTTTTTCCA----------------------------------------
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>chr4D_4618
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-------------------------------GTTTTTCCACCCCGTTCCTGACTTTACGCACCTGCATTT-GTACTCTTC
TTGATCCAATGAGCTGTCTCAAACTTGTCCAGCAACGAGCTGTCGCTGTAA---GTAGTGCGCGGACGGGATCCGATTCG
ACCGGTGGCCATAAACAAGTGCAGATAGGCCAGGAACGGCGCTTTTCTATTGGGCATGTGGGAGTAGATTAAAATCCAAA
AGGCTTGTCACCAAGCATTGTCAACCTCTAATCACAATATCTCGGCCTTGGTTTCGTTTCATCCCTCTAAGCGTGCGTCC
GTGGTGTACATGC-------ACAGTGTCCTCCATTAGAAAAAGTGCCGCGGTGGCACTGTCATGGGCCATGGCACTTGGT
CACTGCACACTAGC-----GGCGGTCGCATTCCAGCAGCCTAAATTCAAGGGCTCTGTTAAGATTGTCTGCCCTCCTTG-
-------TTGTTCTCTGCTGCTTGTTCCTTCTGCTTGTCAGCATTGCGCAGAGCGGATGAAGTGCGCCCAAGGATAAGGT
TGCTGTCGCCAATTTGCCCAATTTGCCATGCAAGTTGCGATGCTCTTGCATAGCTGCGAGGCAACGGTCGATCATCTTGC
GCGTGCCTGTCATCGGCATCGGGCCACATGTGTTTTTTTT-TATTCTGTATGATTGTATGGTGTGGTGTGACCAATGTAT
TTGTGGTTGCGGTTTATTTTTGGTGGCCGGTCGGGTCAGGTGAAATAAATTCGTTAAGATATGCAAATGATTATTCAAGG
CTCACAGTGTGACAACATATGAAAATTG-GTCTTGGTGCGAAGAAGCCCGAACTCGGGG-TTGATCGGAATGCATGTGTG
AACACTTGACCGTCCTCGTGAATAGTACGTGTTGTCGTCTACTCCTAAAGAAATTTCGTCACTGCAATGCAGTCTGATTA
ATGTATGG---TTAGTCCTAAACAAGGGCAGCCCTGAAGATTCTTTCCGGC
>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------S-----------S---S------S-S----S-----
--------S----S-------S--S------------------S------S----------S--S----------S--SS
-S-SSS--SS-----------------S-----------------------------------S----------------
---S----S---S------S--SS--S-----S-------------S----S-----------------------S--S-
----SS-------SS-----S-S---------S-----------------------------------------------
--------------------S---------S-------------------------S--------------------S--
-----------------------S---------------------------------SS---------------------
------------------SSSSSSS---------------------------------S---------------------
-----------------S-----------S--------------------------------------------------
---------------------------------------------------------S----------------------
-------------------S-------S--S----------------------S--------------------------
-----------------------------------------S-S---------S------------------------S-
-----S----SS--------------------------------------------------S-----------------
------------------S--S---------------S------S-----------------------------------
----SS--------------------------------------------------------------------------
-------------------------S----------------------------------S-------------------
------------------------------------------------------------------------------S-
----S--------------S-----------SS-----------------------------------------------
------------S--------------------------------------------------S---------------S
--------------S-----------------------------------------------------------------
----------------------------------------S---------------------------------------
----------------------------------------SSSSSSSSSSS-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S---------S-S---------------------------------------------------------
---------------------------------------------------------S--S-------------------
----------------------------------------S------S--------------------------------
-----SS-SS-S-SSSSSSSSSSSS----------------------------------S--------SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------SS---S-----------------SS------
----------------S--------S------------------------------------------SSSSSSSSSSSS
SSSSSSSSSSSSSS-----------------SSSS----------------------------SSSSSS--S---S----
----SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS----S-----------------------S-----------------------------
--------------------------------------------------S---------S-------------------
---SS------------S-----------------------S--------------------S--SS------SSSSS-S
SSSSSS--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------SSSS-SSSSS
S-SSS---------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------S-----S-----------------------
---------------------------------------------------------S--S-------------------
------------------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S----------
---------------------S----------S-S--------------------S------------------------
----------------S-------S-------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
-------------SSSSSS-----------------------SS------------------------------------
S-------------------------------------------------------------------------------
------------------------------------------------------S-S--------SS-----S-------
--S-----------------------------------------------------------------------------
---------S----------------------SSSSSSSSSSS-S---------------------S---S--------S
SSSS-----S-----S-S-----S--------------------------------------------------------
------------------S--------------------------------SSS--------------------------
--------------------------------S----------------------------------------S------
--------------------------------------------S------S---S----SS-SS----SSS-S-S--SS
--S-----SSSSSSSSSSSS--------------------------SS---S----------------------------
--------------SSSSS----------------------------------------S----S-----------S-SS
SSSSSSS-----------S-------------S----------------S----------------S--------S----
------------S---------------------------S---------------------------------------
-------S---S-----S--------------------S-S-------S-----------------S-----S-------
------S-S-----------------------------------------S----S------------------------
----------------S-------------------------------------------S-------------------
-------------S---------------------------------------------------------S--------
------S-SSS-------------------S----S---------------
>forward_414
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--------------------------------------------------------------------------ACATCG
GTCCCACAAAGCTT------------------------------------------------------------------
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---------------------------------------------------
>reverse_1809
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------------------------------------------------TCGGTGTGCAGATTTCAGGA------------
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---------------------------------------------------
>forward_619
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---------------------------------------TTTTGCTAGCATGCACCACG---------------------
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---------------------------------------------------
>reverse_2641
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AACCCTGATTTCAACGGGGG------------------------------------------------------------
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---------------------------------------------------
>forward_2558
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----------------------------------------------------------AATCCGTTTGGTTTGCTGCC--
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---------------------------------------------------
>reverse_4495
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--------------GCAATTGCAATGGCTGTGCA----------------------------------------------
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---------------------------------------------------
>forward_2771
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-------------------------------CTTGTTTGCTGCCCATGCTT-----------------------------
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>reverse_5366
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-----TCTTGTTCTCTGCCGCTTGT-------------------------------------------------------
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---------------------------------------------------
