>input_sequence_18437
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----------------------------------------ATGGCTTCCTCTGCCACCATGTTGGCGGTGGTGCTACTGG
TGCTGGCGGCGGCGCAGCCAGCGCGGGCGTGCTACTCGCGGGTGTTCAGCTTCGGGGATTCGCTGGCGGACACGGGCAAC
TACCGCTACGTCTACGGCAACGACACCGGGCCCAGGCTGCCCTACGGCGAGACCTTCTTCCACCGCGCCACCGGCCGCTT
CTCCAATGGCCGCATCGTCGTCGACTTCATCGGTATGGAACAAGCATTCGATCTATCCACAGGACAACTTTGTCGGCACA
GTGTATGTGCTAATTTTGGAACCTGTTTTTTTGCTGTGTGGGTGCGCCACGCCGCAGCGGACGCGCTGGGACTGCCGTTC
GTGCGGCCGTACTGGAGCGGGCGGAGCTCGGAGGACTTCGCCGGAGGAGCCAACTTCGCCGTGGGCGCCGCCACGGCGCT
GAGCCCGGAAGTCTTGTGGGAGCACGGGTTCACCGCGGCTAGGGCCGACTTGGTCCACCTCGATATGGAGATGAAGTGGT
TCCGTGACCTGCTCCACCTGCTTTGCCCCACCGATGTAGCCGGTATGTTAATTTACTTCAACATTTTTTGTCAGCTTAAT
TTCTCAAGGCAAGTCAGGGGCGATGATACATTTCGCTAGAAACTTAAAATTTGGATACCAGCTCAGGTTGACAGTATTGT
ATCTTACATTAGGTTTGCCCTCCTCTAAAACTACTTCCCAAGTTCATCTAACGCGACTGGAATGTTGCATCCTTTTATGA
GTGGTGTGCTGGTGCTACGTACTAGTATCAGTTACTCTCTCCATCCACAGATATAAGATGATTTGGATATTTTAATTTGA
ACTATGTAGGGATTAAAATAAGTGAACAAACACACTACTGAGACGTGTCTATATACACCCAATTCGTAAAAAGGTTAGAA
CATTTTATTTTTATTTATAAACGGAGGGAGTGGCATTTACGCGGGACAAATCCCTGTCTCAAGTTTGGCATCGGCGCATA
AAGATGCATCAAGCGGTTAGTCGTTTTTCTCGCTGAGAATAATCACCTTTGGGTGGGCGGTGGGCGCAAGCATTTTGGGC
AGCAGGCGCCAACAACAAAGATGCTTTCACAGTTGAAATTGAGAGAAGGCAACGCGACACTTGTTTCTTCTGCGTCGGGC
AGTAAGCGCCTAACTTGTTTAATTCGATAACTCCCCGCGTGCTGCTATGGAAATATATATATTAAAAATTACAAAAAAGA
AAATTTGTATATATGTGAAACTCCCTCTCGGCTAGCAATGTGTAATTCCCTCTCCGCTAGCAATGTGGAACTAAATTTGG
TTCCACCACAGGCCATGCACGAGGAGACCTCCTAATTAGAGCCCTAAGCGCCAAGTAAGGTTTGTAGCGCTTACGCGTCC
CCTCATGGGCTGCAGCCCAGTGTGCCTCGCATCCTCGTTCGCGTCCCTAGATCGCTTGCCTTTTTTTAATTGTTTCACTT
TTTTGCTTGGTTTTCTTCTTTGTGTTGTATTGTTCACTGAAAAAACCTGTTGCTGGTTTTTTAAAAGTAAAAAAGTTCAT
GAGTTTAAAATAGTTCGCAAATTGTAAAAAGTTTAGTAATTTTTTAAAGTGCATGAATTGAAAAAAAACCCATCAATTTG
AAGAAAGTTCATGAATTCAAAAAGGTTCATGGATTGAAAAAACTTCACGAATCTGGAAAAAGTTCACCAATTCTAAATAG
TGTGTGAATTTTAAAAGCTCACTAAAATTGAAACAAAAATACAAATTACACAAAATTTCAAATTTTTGAAAAAGTTCATG
ACATTTGAAGAAGTTCTTGAAAATTGAAAATCGTTCATAGATTTTCAAAAGAAAAATCATGAATTTAAATAGTTCATCGA
TTTTCAACAAAACATTTCATGAATTTAAAAAAAGTTTGCAGGTTTTAAAAAAAGTTTGGAAAAAATGAAAAGAGTTCGTG
GATTTGATCATTCATTAATTTGAAAAAGAGTTCATGGATTTGAAAACGTTCGCAAATTTAAGAAAATGTTCATGGATTTA
GATAAATGTTCATAAATTTCAAAATTCAGGATTTAAACCAAGTTAGAGAATTAAAAAGTGAAAACAAACTGGAAAAAAGA
GAGGAAAAAAAGGCTAAACAAAACCAAAAAACCATACAGGGAAACGGTTGCGTCAATTTGACGAACAACTAGAAGAAAAA
GAAGAAAATAGGCACACGAGGTATGCTGCGCCATATTGGTCTCCAAATTAAACTAATGTAGTGAGGTTGTAGCTTGATTA
TAGAAATTTCATAAGAAAAGGTAATCACTTTACAATTGATTTATTTTACCATAATAAATCACAACAACATTATTGTTATC
CAGAGGAGACAACTTTGATGTTCGAAGTGAGAGATATAGTACTTCCACATTTTCTCTATAATAGGATCATAAATAAATGG
ATGTAAATTGTTGTA-AGCCTTTCACTTCTTTACTACCATCAAAATGTTGTG------TTTTGATACATTTTCTAAACTA
ATTAAGATGTTATCTTTCCACATTGATAAAGTAACGTGTTTATTCAATAGACTGTGTGGACATGATGAACAAATCTCTTT
TCTTGGTTGGAGAAATTGGGGGAAATGACTACAACGTTCCTCTTACCTCTTTGGTGCCTGTTGAGAAGATTCGCTCGTTC
GCTCCGAGTGTTATTTCCAAAATTTCATCTATAATCACCGTGAGTCATTTGTGGTTTGTTGCTCCTTATGCTATCATTAC
CACTGTTGTTATGTCAAATCCCAATTACAGAAATAGTTTGTAACTACATAATAATGCAGTATAACTAAGTGCAATTTGCA
GGATCTGATTGGATTGGGAGCCAAAACTCTATTAGTTCCCGGCAACCTCCCAATCGGGTGCTTGCCGGTGTACCTCACGA
TGTACCAGAGTGATGACACGGGGGACTATGAGTCAGACACAGGCTGTATCCGTTGGATGAACGAGTTCTCACGCTACCAC
AACAAACTTC-TTGTGGATGAGCTGGAAAAGTTACGGAAACTTCATCCTAGTGTGTCGATCATCTATGCTGATTACTATG
GTGCTGCTATGGAGATCTTTGTTTCCCCTTCTCAGTTTGGTGAGTCTAGAACTTTATGGTTTACACATGAAATAACTTAG
CAGGTAGCAAGAAAAACATTCCCTACTAAGATATGCATATGCTAATCCCGGCTCTTATTTGCTGTAACTGCTTTTTAGGG
ATCAAGAATCCTTTGGTGGCTTGCTGCGGTGTAGAAGGGCCTTATGGTGTGTCAATAACCACAAAGTGTGGACATGGAGA
ATACAAGGTGTGTGATAACCCACAAAAGTATGCATCTTGGGATGGCTTGCATCCCACAGAAACGTCATACAAGGCCATTG
CTGATGGTCTGCTAAGAGGTCCATACACTCAACCTCCAATTGCCACCACCAAAAATTCATGTTCAAAACTTACCGAGCTT
GTCTCGTCTGTAGAATACAAGGTTCTCTATGATTTGTAATTTTGTAACACACATGTGGAGGATTACTGTATGAAAACTTG
CCGAATGACAAACATTTTTTGGCATGGCTAGTTGTCGTTCCAGATGC-TCAAGTGA------------------------
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-----------------
>chr3D_1_TraesCS3D01G050700
GCGGGGGGAAACCCTTTTTCTCATAATGAGTACCGCCTGCTGCTTGGAAGCCTTCGACGCACGCCCCCCCTTGGCCAGCC
TGACGCTTCGACAAGGGGAGGAGACCGGCACACGCTTCTGCCTTGGCTTCTGTTGCTTTTGAGGGGGGTTCCTGCTCACC
GGCTGCGCCAACAGGGGGGATAGCGCCTGTCTGAGCTCTGCGCATATCATGGCCACCTGATCACAGGGCGACGTGGAGGC
CGGACGCGTTACAACCTCGGCCACATCTTCCATCGGCGTGCCAGCCTGCTCGGAAAGGCTCACCGCAAACCAGCCCTCCC
CAAAATCTTGCGTGCATGGGTACGTCCCATCCGCATGCAAGACGGGCCCACACATTCCAGAGCAAGGGACACGCCCTCCA
TGCATGCAAGCTGCAAGCTCGGCGTCCAGTGCGCTCGAACACTTCGAGAGGAAACGACATGACGCAAAGACCACAGTGCC
GCGGTGGTCGCGAAAGACCAACTAGCACTTCCCCCGTTTTCATGTCCTTCTGCAAAAAAATTGCAAGAGCTAGCTGCTGA
TTCGTCACATTTGGCGAAACACACACGCAACAGTCAAAAGCAAAGCAATTGTGGACTCCTCCCGTGGAAGTGCTGCTATA
TACTTATTATATACTCACGATGCGACCTCATGTAATCTTTATTATTGTCGTACAATCTTTATTTGCACATGCAACCTCGT
GGTTACCATCTGCATTATTTGTTTCCAACTCTTATCCGGCCCCGGCCGATAAAATAAGTAAGGATATAGGAAAACGCTTT
TGTCTTTCTGCTTATCCGCGGCATCATCTTTCCTGCAACTTGTCGGATGAAAGCGATCGCACGCCGGCACGCGATCGTAA
TCACCACCGTTTGGTGGAGTAGCTGACAGTCGCTTCCCTCCCGCGCTCCCCGTGGATTCTTTATATCCGTTCATCTCGAG
CACATGTCCCACGAGAAACAGAGAGACAGAGAGAAGCAGCATGGCTTCCTCTGCCACCATGTTGGCGGTGGTGCTACTGG
TGCTGGCGGCGGCGCAGCCAGCGCGGGCGTGCTACTCGCGGGTGTTCAGCTTCGGGGATTCGCTGGCGGACACGGGCAAC
TACCGCTACGTCTACGGCAACGACACCGGGCCCAGGCTGCCCTACGGCGAGACCTTCTTCCACCGCGCCACCGGCCGCTT
CTCCAATGGCCGCATCGTCGTCGACTTCATCGGTATGGAACAAGCATTCGATCTATCCACAGGACAACTTTGTCGGCACA
GTGTATGTGCTAATTTTGGAACCTGTTTTTTTGCTGTGTGGGTGCGCCACGCCGCAGCGGACGCGCTGGGACTGCCGTTC
GTGCGGCCGTACTGGAGCGGGCGGAGCTCGGAGGACTTCGCCGGAGGAGCCAACTTCGCCGTGGGCGCCGCCACGGCGCT
GAGCCCGGAAGTCTTGTGGGAGCACGGGTTCACCGCGGCTAGGGCCGACTTGGTCCACCTCGATATGGAGATGAAGTGGT
TCCGTGACCTGCTCCACCTGCTTTGCCCCACCGATGTAGCCGGTATGTTAATTTACTTCAACATTTTTTGTCAGCTTAAT
TTCTCAAGGCAAGTCAGGGGCGATGATACATTTCGCTAGAAACTTAAAATTTGGATACCAGCTCAGGTTGACAGTATTGT
ATCTTACATTAGGTTTGCCCTCCTCTAAAACTACTTCCCAAGTTCATCTAACGCGACTGGAATGTTGCATCCTTTTATGA
GTGGTGTGCTGGTGCTACGTACTAGTATCAGTTACTCTCTCCATCCACAGATATAAGATGATTTGGATATTTTAATTTGA
ACTATGTAGGGATTAAAATAAGTGAACAAACACACTACTGAGACGTGTCTATATACACCCAATTCGTAAAAAGGTTAGAA
CATTTTATTTTTATTTATAAACGGAGGGAGTGGCATTTACGCGGGACAAATCCCTGTCTCAAGTTTGGCATCGGCGCATA
AAGATGCATCAAGCGGTTAGTCGTTTTTCTCGCTGAGAATAATCACCTTTGGGTGGGCGGTGGGCGCAAGCATTTTGGGC
AGCAGGCGCCAACAACAAAGATGCTTTCACAGTTGAAATTGAGAGAAGGCAACGCGACACTTGTTTCTTCTGCGTCGGGC
AGTAAGCGCCTAACTTGTTTAATTCGATAACTCCCCGCGTGCTGCTATGGAAATATATATATTAAAAATTACAAAAAAGA
AAATTTGTATATATGTGAAACTCCCTCTCGGCTAGCAATGTGTAATTCCCTCTCCGCTAGCAATGTGGAACTAAATTTGG
TTCCACCACAGGCCATGCACGAGGAGACCTCCTAATTAGAGCCCTAAGCGCCAAGTAAGGTTTGTAGCGCTTACGCGTCC
CCTCATGGGCTGCAGCCCAGTGTGCCTCGCATCCTCGTTCGCGTCCCTAGATCGCTTGCCTTTTTTTAATTGTTTCACTT
TTTTGCTTGGTTTTCTTCTTTGTGTTGTATTGTTCACTGAAAAAACCTGTTGCTGGTTTTTTAAAAGTAAAAAAGTTCAT
GAGTTTAAAATAGTTCGCAAATTGTAAAAAGTTTAGTAATTTTTTAAAGTGCATGAATTGAAAAAAAACCCATCAATTTG
AAGAAAGTTCATGAATTCAAAAAGGTTCATGGATTGAAAAAACTTCACGAATCTGGAAAAAGTTCACCAATTCTAAATAG
TGTGTGAATTTTAAAAGCTCACTAAAATTGAAACAAAAATACAAATTACACAAAATTTCAAATTTTTGAAAAAGTTCATG
ACATTTGAAGAAGTTCTTGAAAATTGAAAATCGTTCATAGATTTTCAAAAGAAAAATCATGAATTTAAATAGTTCATCGA
TTTTCAACAAAACATTTCATGAATTTAAAAAAAGTTTGCAGGTTTTAAAAAAAGTTTGGAAAAAATGAAAAGAGTTCGTG
GATTTGATCATTCATTAATTTGAAAAAGAGTTCATGGATTTGAAAACGTTCGCAAATTTAAGAAAATGTTCATGGATTTA
GATAAATGTTCATAAATTTCAAAATTCAGGATTTAAACCAAGTTAGAGAATTAAAAAGTGAAAACAAACTGGAAAAAAGA
GAGGAAAAAAAGGCTAAACAAAACCAAAAAACCATACAGGGAAACGGTTGCGTCAATTTGACGAACAACTAGAAGAAAAA
GAAGAAAATAGGCACACGAGGTATGCTGCGCCATATTGGTCTCCAAATTAAACTAATGTAGTGAGGTTGTAGCTTGATTA
TAGAAATTTCATAAGAAAAGGTAATCACTTTACAATTGATTTATTTTACCATAATAAATCACAACAACATTATTGTTATC
CAGAGGAGACAACTTTGATGTTCGAAGTGAGAGATATAGTACTTCCACATTTTCTCTATAATAGGATCATAAATAAATGG
ATGTAAATTGTTGTA-AGCCTTTCACTTCTTTACTACCATCAAAATGTTGTG------TTTTGATACATTTTCTAAACTA
ATTAAGATGTTATCTTTCCACATTGATAAAGTAACGTGTTTATTCAATAGACTGTGTGGACATGATGAACAAATCTCTTT
TCTTGGTTGGAGAAATTGGGGGAAATGACTACAACGTTCCTCTTACCTCTTTGGTGCCTGTTGAGAAGATTCGCTCGTTC
GCTCCGAGTGTTATTTCCAAAATTTCATCTATAATCACCGTGAGTCATTTGTGGTTTGTTGCTCCTTATGCTATCATTAC
CACTGTTGTTATGTCAAATCCCAATTACAGAAATAGTTTGTAACTACATAATAATGCAGTATAACTAAGTGCAATTTGCA
GGATCTGATTGGATTGGGAGCCAAAACTCTATTAGTTCCCGGCAACCTCCCAATCGGGTGCTTGCCGGTGTACCTCACGA
TGTACCAGAGTGATGACACGGGGGACTATGAGTCAGACACAGGCTGTATCCGTTGGATGAACGAGTTCTCACGCTACCAC
AACAAACTTC-TTGTGGATGAGCTGGAAAAGTTACGGAAACTTCATCCTAGTGTGTCGATCATCTATGCTGATTACTATG
GTGCTGCTATGGAGATCTTTGTTTCCCCTTCTCAGTTTGGTGAGTCTAGAACTTTATGGTTTACACATGAAATAACTTAG
CAGGTAGCAAGAAAAACATTCCCTACTAAGATATGCATATGCTAATCCCGGCTCTTATTTGCTGTAACTGCTTTTTAGGG
ATCAAGAATCCTTTGGTGGCTTGCTGCGGTGTAGAAGGGCCTTATGGTGTGTCAATAACCACAAAGTGTGGACATGGAGA
ATACAAGGTGTGTGATAACCCACAAAAGTATGCATCTTGGGATGGCTTGCATCCCACAGAAACGTCATACAAGGCCATTG
CTGATGGTCTGCTAAGAGGTCCATACACTCAACCTCCAATTGCCACCACCAAAAATTCATGTTCAAAACTTACCGAGCTT
GTCTCGTCTGTAGAATACAAGGTTCTCTATGATTTGTAATTTTGTAACACACATGTGGAGGATTACTGTATGAAAACTTG
CCGAATGACAAACATTTTTTGGCATGGCTAGTTGTCGTTCCAGATGC-TCAAGTGATATCTAATGTCGGCATGCATGCAT
GCCAAACGATCTGTATTTAAGGTACACGAGTATCAATATCTTCACCTCAGGTTCTGGCTGGTAATGACTGCACAACTCTA
AATCTTTGTTAGCTCAGGTTAATATTTTTCAT-GTCTTTCTTTGGGTGGTATGCTTCCTCATTGTTGCTATTCTACCTTT
TCTTGGTAGTCAACAACCAACGAACATAGGCTAGGACCTTTATGTACTAGTACAACTTTCTATATTACAAAGAGCACATA
GACACACTTTGCACAAATAACACCACACATACGCGCGCGCACAAACACACACAAGATGTGCTCATGTGCTTTCTACGGCT
TTTTGCATAGAAACTAAAGGCAATCAATGGTTGCGATTAGAGGTGCTAAAGCTAATCCACTAGTTATTTGAGGAGAGGGT
ACTCTCAACACTTTGCAACCTTTTATATATATTGTGAGTAATTTCATCAGTGCCTCGTAGTGATATGGTAGTCGCACTGA
TTTACTTGGTAGCGAGACACAATGGAACAACCATTACCTAGGTCCATGCCCACCCGGTAGGTGAAATGCCTTAGATCATT
GGGTCGTGACATGTGTCTAGAACTTCTCATTCTGCAAGGCTTCGACCTCATTTATATAGGATAAGTATGTCGATGGCCTC
CTCTCCTCCGAGTTAAACTTCGGATCATTGATGGCCATGACTCCTCCTCTTTTAGCAGGCACGTTCACAAACTCGGTCAC
CCATGTACTGGCTCCATGGACCTGTGCACAACTCAGCATGTACGTCATGTTATATAGCTGTATATATGCGACATAGGGGT
ACCGTAGTATGACCCTTTAACTGTTGGAAATATTCCTTAAAGGCAATAATATTTGTATTATTTCTTTCCAAGTTTATTGT
TAATGTTTAAATTCCATGTTGTAACTGCTATGGTTCTTAAATATGCGGTTCAGTGGATACCTTGTTAGCACGTGTAGAGA
TATAAACGGTAAAACCT
>chr3A_3231
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------------------------------CCATATTGATGCCCAAATTATGCTAATATATTGAGGTTGTAGCTTGATTT
TAGAAATTTCAACAGGAACGGTAAATAACCTACAATTGGTTTGTTTTACCA-----AATGACAACAACATTACTATTATC
CAGAGGAGACAACTTTGGCGTTCAAAGTCAAAGATATAG-ACTTCCAAATTTCCTCTACAGCGGAATCAGAAAAAAATGG
ATCTAAATTGTTGTACACCTTTTCACTATTTTGCTACCATAAAATGTTGTATTTTCTATTTCGATATATTTTCTAAATTT
ATTAAGATGTTACCTTTCCGCATTGATAAAGTAACGTGTTTATGCAACAGACTGTGCGGACATGATGAACAATTCTCTTT
TTTTGGTTGGAGAAATTGGGGGAAATGACTACAACATTCCTCTTACCTCTTTGGTGCCTGTTGAGAAGATCCGCTTGTTC
ACTCCGAGTGTTATTTCCAAAATATCATCTACAATCATCGTGAGTCATTTTCTGTTT-TTGCTCCTTATGCTATCATCGC
CATTGTTATTATGTCAAATCTCAATTACATAAATAGTGCATAACTACATAATAATGCAATGTAACGAGGTGCAATTTCCA
GGATCTGATTGCACTAGGAGCCAAAACTCTATTAGTTCCCGGCAACCTCCCCATCGGGTGCTTGCCGGTGTACCTCACGA
TGCACCAAAGTGATAACATGGAGGATTATGAGTCAGAGACATGTTGTATTCGTTGGATGAATGAGTTCTCACGCTACCAC
AACAAACTTCTTTGTGGATGAGTTGGAAAAGTTAAGAAAGCTTCATCCAAGTGTGTCAATCATCTATGCTGATTACTATG
GAGCTGCTACGGAAATCTTCGTTTCCCCTTATCAGTTTGGTGGGTCCAAAACTTTATGGTTTATACATGAAATCACTTAG
AAGGCAGCAAGAAAAACATTCTCTACTAAAAGATGCATATGCTAGTCCCGACTCTCATTTGCTGTAACTGCTCTTTAGGT
ATCGAGGATCCTTTGGTGGCTTGCTGCGGTGTAGAAGGGCCTTATGGTGTGTCAATAACCACAAAGTGTGGACATGGAGA
ATACAAGATGTGTGATAACCCACAAAAGTATGCATCTTGGGATGGCTTGCATCCCACAGAAACGTCATACAAGGCCATTG
CTGATGGTCTGCTAAGAGGTTCATACACTCAGCCTCCAATTGCCACCACAAAAAATTCATGTTCAAAACTTACCAAGTTT
GTCTCGTCTGCAGAGTACAAGGTTCTCTATGATATGTAATTTTGTAACATAC----------------------------
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-----------------
>chr3B_3500
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------------------------------------------------------------------CATTTTCTAAATTA
ATTAAGATGTTATCTTTGCACATTGATAGAGTAACGTGTTTATTCAATAGACTGTGTGGGCATGATGAACAAATCTCTTT
TCTTGGTTGGAGAAATTGGGGGAAATGACTACAATGTTCCTCTTACCTCTTTGGTGCCTGTTGAGAAGATTCGCTCGTTC
GCTCCAAGTGTTATTTCCAAAATTTCATCTATAATCACGGTGAGTCATTTGTTGTTTGTTGCTCCTTATGCTATCATTAC
CACGC-TGTTATGTCAAATCCCAATTACAGAAATAGTTCATAACTACATAATAATGCAGTATAACGAAGTGCAATTTGCA
GGATCTGATCGGATTGGGAGCCAAAACTCTATTAGTTCCCGGCAACCTCCCAATCGGGTGCTTGCCAGTGTACCTCACGA
TGTACCAGAGTGATGACACGGGGGATTATGAGTCAGACACGGGATGTATCCGTTGGATGAACGAGTTCTCACGCTACCAC
AACAAACTTC-TTGTGGATGAGCTGGAAAAGTTACGGAAACTTCATCCTAGTGTGTCGATCATCTATGCTGATTACTATG
GAGCTGCTATGGAGATATTTGTTTCCCCTTATCTGTTTGGTGAGTCTAGAACTTTATGGTTTACACATGAAACCACTTGG
CAGGT--CAAGAAAAACATTCTCTACTAAGATATGCGTATGCTAATCCCGGCTCTTGTTTGCTATAACTGCTATTTAGGG
ATCGAGGATCCTTTGGTGGCTTGCTGCGGTGTAGAAGGGCCTTATGGTGTTTCAGTAACCACAAAGTGTGGACATGGAGA
ATACAAGGTGTGTGATAACCCACAAAAGTATGCATCTTGGGATGGCTTGCATCCCACAGAAACGTCATACAGGGCCATTG
CTGATGGTTTGCTAAGAGGCCCATACACCCAGCCTCCAATTGCCACCACCAAAAATTCATGTTCAAAACTTACCGAGCTT
GTCTCGTCTGCGGAATACAAGGTTCTCTATGATTTGTAATTTTGTAACATATATGTGAACGATTAATGTATGAAAACTTG
CCTAATGATAAACATA-TTTGGCATGGCTAGATGTCGTTCCCATATAATCAAGTGATATCTAATGCCGGCATGCG----T
GCCAAATGATCTGTAGTTAAGATACACGTGTATCAATATCTGCACCTCATCTTCAGACTGGTAACGCTTGGACGACTCTG
AATCTTTGTTAGATTAGGTTAATATTTTTTTAGGTCTTTCTTTGGCGGAAATTGGCTTTGT-------TATTCTACCCTT
TCTTGGTAGTCAACAACCAACGAACATATACTAGGACTTTTATGTACTAGTAAAACTTTCTATATTACAAAGTGCATGTA
GACACACTTTGCACGAATAACACCAC--------GCGCGCGCAGACACACACAAGATGTGCTCATGTGCTTTCTAGGACC
TTTTGCACAAAAACCAAAGGCAATCAATCGGTT-----------------------------------------------
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-----------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-SS--------SS-----S--S------------------S
-----------SS--S--S-----SS-SSS--------S---S--------SSSSS---S------------S-S-----
-----------------SS----S----S-S--------S-------S----S-----S-SSS-S----S---S------
--S--------------S-S-------SS---S-------S---SSS-SSSS---------S---------------S--
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--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
--------------------------------------SS-------------------------S--------------
--------------------------------------------------------------------------------
-------------------------S-----------------S------------------------------------
--------------------------------------------------------------------------------
-S----------------------------S------------------------------------------S------
---------------------S--------------------------------------------------S-------
---S--S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
----------S--------------------------------------S-------S-S-----S--------------
--S-----S------SS--------------S---------SSSSSS------------------S--------SSSSS-
------S--------S-----S------S------------S-------SS---S-S-------S-SS--S--S-----S
------------S-S--------------SSS-------------SS-SS--SSSSSS-SSSSSSSSS---------S--
----------------------------SS-------S--------------S-------------------S---SS--
--------------S-----------SSSSSSSS------S--S-------------------------------S-S-S
-------S-S----S-------------S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS
>forward_515
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GACCAACTAGCACTTCCCCC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>reverse_2129
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------GCAACGCGACACTTGTTTCT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------
>forward_518
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CAACTAGCACTTCCCCCGTT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>reverse_2434
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------CTCGTTCGCGTCCCTAGATC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------
>forward_2148
--------------------------------------------------------------------------------
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------------------------------------------------GCAACGCGACACTTGTTTCT------------
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-----------------
>reverse_3226
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CTGCGCCATATTGGTCTCCA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>forward_2280
--------------------------------------------------------------------------------
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--------------------CTCCCTCTCGGCTAGCAATG----------------------------------------
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-----------------
>reverse_3227
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------TGCGCCATATTGGTCTCCAA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>forward_3173
--------------------------------------------------------------------------------
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---------------------------------ATACAGGGAAACGGTTGCGT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>reverse_5173
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CCCGGTAGGTGAAATGCCTT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
