>input_sequence_17845
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-----------------------------------------------------------------ATGGCCGACGCATCC
GCCTTCCCCTACGGGCTGCGCGTCCTCGTCGTCGACGACGACCCCACCTGGCTCAAGATACTCGAGAAGATGCTCCGCAA
GTGCTCCTACGAAGGTTCGAATCTCCGCCTGCTTTCCTCTTCGGGTTCTCGATCGGCTTGGCGTGCCGGCTACGCTGTCG
CCTCCTCCTCTCCTGTGGGTGTATGTGCATCCGTCCGTCGCCTATGCATGCCTGCTGCTTGTTTAAATTACCCAGTGAAA
TTGGTCGAGA-------CTACTCGCTATAATTAAATTACTGTGGGTGTGTGTGC--GCGTTCTGGAATTGAAGTGGACTG
TTCGGACCTTGTCGATCGAATTTAGGCTGTTTGGGGAACTGTCTTTCATAGATTTGTATCATCCTCCAGCGATTTGCCCG
CTTTTGGGCT-CCTTTTTGTGTCTGTTTTTGCTTGTGTATGTATGTGTGTGACTGGTTGGTGTCAACTGTGAGTGACTGG
GTGGGAGCAACAGAGGCCTTGTCCATTT-ACCCTTTTTGGCTAAAATTTC-GTATAGCGAACAACATATGCATTTCGAGG
CTGTGCCCACTTTTAGGTGATGATGATTGCTCAATTATTTGGATGGATGTCTTGCTTCTCCAGAGT--AGTCGGTGTCAC
TACTGCATCAGTTTTGTTTCTTTTGAGGTGCTGCGTAATTTGCTTTTCAGGCAACTCCTGTGTAATTTACCAGGAACCAC
ACATTAAAATTCAGAGCGCGTAG----TTCCAACAATATCTTCTTTGCGGCCTTTCACCATTTAGGTGTTATATTTCTGT
GACACCAGTGGCTGGGGACTTTACGGGCTATGTGCAAAATTCAGTTTTAACAGACAGTACTTACCTGTCCTTTGGTTAGA
CCTATTGCCAATTATCAC-TACTGAGT-----GATCAGTCTTCTTAACTAACTTAACTACCAACCTATTAGCCTCTCTGT
TTTGTGTTGTGCGCCAGCGCAGAAACCATTTTTATGCCTCCACTCCATATTTATGTTAATAGTCATGATGTTTGTGC---
GATGGATGATGATGAGTTATCTGTTTATCAGTTAGACTAAACTAG---TTATCTACCTGCAGTCACCACATGCGGCCTAG
CTAGAGTTGCTCTTGAAATTCTCCGGGAGAGGAAAAACAGGTTCGACATTGTGATTAGTGATGTCAACATGCCAGACATG
GATGGCTTCAAGCTTCTTGAACACATTGGACTTGAGATGGATCTACCTGTTATAAGTTAGTATCCAACACCAAATCTGTC
TTCCTGCAATTTTCAAAGAAGAAACGATATATTTTATTCAGTTTGAATATCTACTCAAAACTTCCAAACTGCTCCACTCT
GTTTTCACAGTGATGTCCATTGATGGGGAGACAAGTAGGGTGATGAAAGGTGTCCAGCATGGTGCTTGCGATTACCTCCT
TAAGCCCGTTCGGATGAAGGAACTCCGGAACATTTGGCAACATGTATACAGGAAGAAAATGCACGAGGTTAAAGAGATCG
AAGGTCATGATAGCTGTGATGATCTCCAGATACTAAGATATGGTTTCGAGGGATTTGATGAGAAGGGCCTATTTATGACA
GTTGATTCCGATGCCACGAGGAAGAGAAAAGACGTGGACCACGGAGATCAGGACTCCAGTGACGGTGCTACTGCTAAAAA
GGCTAGAGTAGTCTGGTCTGTTGATCTGCATCAGAAGTTTGTAAATGCTGTCAACCAAATTGGATTCGACAGTGAGTGCT
CTCTGAAATCTAACACAA------------------------------------TATCAGTTACCTTCCTATAAATTTAT
CAAATGAGCATGATCCTCATTCCAAAAGGGCAAATGTCGTCATTTTGCAGAAGTGGGGCCGAAGAAAATTTTGGACCTGA
TGAACGTGCCGGGCTTAACAAGAGAGAATGTTGCTAGCCATCTTCAGGTATGACATGTAATGTTCAAATGCTAAATTTCT
ATGGTCTATTTTCTTGAAAAAGGAACCGAGTTCATAAAGAGGGCGTTAAATCAGATTTTTAATAAAATCAAGAAAATTTG
TATACAGGACATACTAAATTCAGATAATTACACCATGACTTTTCTCCAACTCCCTATACCTGGTGTGTCATGACAAATTT
GTGCAACTTTGAAAATCACAAATCAGGCGTGTGAAGAGCAG-AAAATTGGAATTTATAATGTGATGCAGGTAGTTTCTTG
TGCAATAAAGGATCACCTTTTC--TAAATTACACAAGATCACCTTTGTCAGAGTTTCCCCTAGAAGTAAGCGAAAGGAGA
TTCTTGGTTCCGTAAATGACAGAAAAAAGGGATGTTATGATGTTGCAATGAGTTCCCGCCATGTGTATTCTTTGCCTCTG
ACATGTTCATGGGTCAGGACAAAGCTACTAATTGATTATTGGTGGAGCTACTGTAGGAGCATACTTTTTGAGGGGCTCCT
TCTCATCTCGTAAAAAGCTTGTTTGCAATTTATATTAACATAAATCCTTATTGTTAACTGTCAAATATCACATATTCAA-
TTTTCATACAAATCCATGTGAATTTTGAAGCATCTTACCAACACTGTAGGATTCAAGTAAAATCATTGTATTCCTTAAAG
CTGAA-AATAATCTTCTGGTATTCATACGAAGAAAATTCATTGTT-ATGCAGAAATATCGCCTCTACTTGGGTAGGCTGC
AAAAGCAGAACGAGGAAAGGCTACTGGGCTCTGCTAGGCAAGATTTCAGCACCAAGGGGCCATCATCAGAGAACCTTAAC
CTCAGAAGCTCCTTCCAAGAGCAACCAAGCAACACTTCCAGTGGATATCCGCATGCTTCCCAGAAGATACAAGGCCAGAG
CAGTGTGTCGGATTCTCAGTTGGAAGAAACCAAGCGCATGGTCCCCTTACCGGCGCCAGATAGAAGCATGAATTCTGTAA
GTTCAGCTGCCGAACCTCAGAATGTCGCCGGTGTTTCACCAATAGGCGGCGTGCTGTCGTTCAAAGGTTTGCCAGTGAAT
CAGGACAGGAAGCCATCAGAAACCATGATCCTGGAATGCCAGGCCTGGACTGGAGGAGTGCCAGCAAAGCAGTTCATGCA
GTACCCAAAGCACAACCATGCACGCTGCGACTTGTTAGGGGATTATGCATGCCTACCAAAGCCAGACTTGGAACACCCCA
CTGCTCCTGGTCATTTGTTCACACCACCTCCGCTGATCTCAATGAGTTGCAGTACGGAGATGGACGCCAGAAACTTCTCA
GATGTGAAGCCAGCCCTTGTTGACTGCATCAAGTCCTTCTCGCCGGCGTTGACATGTACAGCTGATTCGGTTTCTGTTCA
GATCAGTGACAGTGTTGTGACCTCAACAGATGCTGCTGACCGGAAGTTTTCCAGTGTGGAAGGTTTGCCTACCACTAAAG
ATTGTTACTTCGGCCAGACAAGCAACCAAGGCTCCTGGCTTCGTTCGCAAGAGGAGCCAAGCATCATATGCGGGGCGGAT
TTTGCTTCTCTGCCCGAGGATCTCCCCGGCTACCCACTTCAAGGAGGTGTCTCCTTTGAGAATGTAGGGCTGAGTAGCAT
TGATTTGTTTCACTACAACGACGCGATGATACTATCTGGGCTACAAAGTAACTGGTATGATGATCAAGACCACTTCAGCA
GCGAAACGACAGACTACCCTTTGATGGATGGATGCCTCTTTGCATAA---------------------------------
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----------------------------------------------------------------
>chr3B_1_TraesCS3B01G423600
ATTCAATCATGCCTCACTTAACTTTTTTTTGTGTGTATGTGTGCTGGATTCTCTAAACGTGTCTCTGTCTATCACATAGT
TTTACTTTTTATCGTTAGACTAACACATACTATTAGGTGGACACCATGACATGGCAAAGCAAACATACCCATGTTATCCG
ACACCCATTACGTTACCGTAATGGTTAAAGGGAGCTTTGGGGAAAAAGAAGACAAGTTGAGGAAAACTCAATAGAAAAAA
AAACAAGTAA-AGAGCCGGGCGAGATAATGGTAATAGACTGGTTTTTTTG------GGTAATAGGTTACAATTA------
--------------------------------------------------------------------------CATTAT
GATTGTATAAACATACCTGGACTCAATATAATAATAATTA-TTGTAAACCCGTCAAACTCATCTTCCTCGTGGCGGGTTT
AGAGAATAATCTCATCACAACAACAACCCGCAAACATACATCGGTTGACACACTGCAACATCCGTCTATCTGAAAATGCA
CTTCATCTGCATCTACAGAATTCAGCCTCTACATCCACCACCAAAGCATTACCCACTAGCCAGAAAAGCACATTATACTC
AGACAAACTTAGCTCCTTATCTCCTATCACAAGACCCAACTTACAACTTAACAAAGCCCTATGCCAGTCAGTATGCCTAA
TAACAATAACATTCCCCAGCCATAGAGAAGGAGCAGAACCATCAGAAAAGCAACACGCCTCGCACCCCCACTTAATC-AA
GGTCCGGTCACGGCTCACTTGGCTCGGCTTCTTCTCTTATTCCAAAGCCGTTTGTTGGGCTCGCGAGAAAGAGAAAGCCG
CAGTCGGAATAAAGTTGGTTAAGCGCGCGCGCGCG----CCAATATTAATCGGCCCCCTCCCCCTCCACTTCCCCCCAAC
CCCCAGCCCTTTTACCCGCCTCCCCACCT----TTGCCTCCCACTG--------CCCGCTCCCTCCCACTCCACTCGCAG
GCCCCCGCCCGCCGCGCACCGAGGGAGAGGAAGGAGGGCTGAGCGCGGCGCGGCGCGGCGCGGCCATGGCCGACGCATCC
GCCTTCCCCTACGGGCTGCGCGTCCTCGTCGTCGACGACGACCCCACCTGGCTCAAGATACTCGAGAAGATGCTCCGCAA
GTGCTCCTACGAAGGTTCGAATCTCCGCCTGCTTTCCTCTTCGGGTTCTCGATCGGCTTGGCGTGCCGGCTACGCTGTCG
CCTCCTCCTCTCCTGTGGGTGTATGTGCATCCGTCCGTCGCCTATGCATGCCTGCTGCTTGTTTAAATTACCCAGTGAAA
TTGGTCGAGA-------CTACTCGCTATAATTAAATTACTGTGGGTGTGTGTGC--GCGTTCTGGAATTGAAGTGGACTG
TTCGGACCTTGTCGATCGAATTTAGGCTGTTTGGGGAACTGTCTTTCATAGATTTGTATCATCCTCCAGCGATTTGCCCG
CTTTTGGGCT-CCTTTTTGTGTCTGTTTTTGCTTGTGTATGTATGTGTGTGACTGGTTGGTGTCAACTGTGAGTGACTGG
GTGGGAGCAACAGAGGCCTTGTCCATTT-ACCCTTTTTGGCTAAAATTTC-GTATAGCGAACAACATATGCATTTCGAGG
CTGTGCCCACTTTTAGGTGATGATGATTGCTCAATTATTTGGATGGATGTCTTGCTTCTCCAGAGT--AGTCGGTGTCAC
TACTGCATCAGTTTTGTTTCTTTTGAGGTGCTGCGTAATTTGCTTTTCAGGCAACTCCTGTGTAATTTACCAGGAACCAC
ACATTAAAATTCAGAGCGCGTAG----TTCCAACAATATCTTCTTTGCGGCCTTTCACCATTTAGGTGTTATATTTCTGT
GACACCAGTGGCTGGGGACTTTACGGGCTATGTGCAAAATTCAGTTTTAACAGACAGTACTTACCTGTCCTTTGGTTAGA
CCTATTGCCAATTATCAC-TACTGAGT-----GATCAGTCTTCTTAACTAACTTAACTACCAACCTATTAGCCTCTCTGT
TTTGTGTTGTGCGCCAGCGCAGAAACCATTTTTATGCCTCCACTCCATATTTATGTTAATAGTCATGATGTTTGTGC---
GATGGATGATGATGAGTTATCTGTTTATCAGTTAGACTAAACTAG---TTATCTACCTGCAGTCACCACATGCGGCCTAG
CTAGAGTTGCTCTTGAAATTCTCCGGGAGAGGAAAAACAGGTTCGACATTGTGATTAGTGATGTCAACATGCCAGACATG
GATGGCTTCAAGCTTCTTGAACACATTGGACTTGAGATGGATCTACCTGTTATAAGTTAGTATCCAACACCAAATCTGTC
TTCCTGCAATTTTCAAAGAAGAAACGATATATTTTATTCAGTTTGAATATCTACTCAAAACTTCCAAACTGCTCCACTCT
GTTTTCACAGTGATGTCCATTGATGGGGAGACAAGTAGGGTGATGAAAGGTGTCCAGCATGGTGCTTGCGATTACCTCCT
TAAGCCCGTTCGGATGAAGGAACTCCGGAACATTTGGCAACATGTATACAGGAAGAAAATGCACGAGGTTAAAGAGATCG
AAGGTCATGATAGCTGTGATGATCTCCAGATACTAAGATATGGTTTCGAGGGATTTGATGAGAAGGGCCTATTTATGACA
GTTGATTCCGATGCCACGAGGAAGAGAAAAGACGTGGACCACGGAGATCAGGACTCCAGTGACGGTGCTACTGCTAAAAA
GGCTAGAGTAGTCTGGTCTGTTGATCTGCATCAGAAGTTTGTAAATGCTGTCAACCAAATTGGATTCGACAGTGAGTGCT
CTCTGAAATCTAACACAA------------------------------------TATCAGTTACCTTCCTATAAATTTAT
CAAATGAGCATGATCCTCATTCCAAAAGGGCAAATGTCGTCATTTTGCAGAAGTGGGGCCGAAGAAAATTTTGGACCTGA
TGAACGTGCCGGGCTTAACAAGAGAGAATGTTGCTAGCCATCTTCAGGTATGACATGTAATGTTCAAATGCTAAATTTCT
ATGGTCTATTTTCTTGAAAAAGGAACCGAGTTCATAAAGAGGGCGTTAAATCAGATTTTTAATAAAATCAAGAAAATTTG
TATACAGGACATACTAAATTCAGATAATTACACCATGACTTTTCTCCAACTCCCTATACCTGGTGTGTCATGACAAATTT
GTGCAACTTTGAAAATCACAAATCAGGCGTGTGAAGAGCAG-AAAATTGGAATTTATAATGTGATGCAGGTAGTTTCTTG
TGCAATAAAGGATCACCTTTTC--TAAATTACACAAGATCACCTTTGTCAGAGTTTCCCCTAGAAGTAAGCGAAAGGAGA
TTCTTGGTTCCGTAAATGACAGAAAAAAGGGATGTTATGATGTTGCAATGAGTTCCCGCCATGTGTATTCTTTGCCTCTG
ACATGTTCATGGGTCAGGACAAAGCTACTAATTGATTATTGGTGGAGCTACTGTAGGAGCATACTTTTTGAGGGGCTCCT
TCTCATCTCGTAAAAAGCTTGTTTGCAATTTATATTAACATAAATCCTTATTGTTAACTGTCAAATATCACATATTCAA-
TTTTCATACAAATCCATGTGAATTTTGAAGCATCTTACCAACACTGTAGGATTCAAGTAAAATCATTGTATTCCTTAAAG
CTGAA-AATAATCTTCTGGTATTCATACGAAGAAAATTCATTGTT-ATGCAGAAATATCGCCTCTACTTGGGTAGGCTGC
AAAAGCAGAACGAGGAAAGGCTACTGGGCTCTGCTAGGCAAGATTTCAGCACCAAGGGGCCATCATCAGAGAACCTTAAC
CTCAGAAGCTCCTTCCAAGAGCAACCAAGCAACACTTCCAGTGGATATCCGCATGCTTCCCAGAAGATACAAGGCCAGAG
CAGTGTGTCGGATTCTCAGTTGGAAGAAACCAAGCGCATGGTCCCCTTACCGGCGCCAGATAGAAGCATGAATTCTGTAA
GTTCAGCTGCCGAACCTCAGAATGTCGCCGGTGTTTCACCAATAGGCGGCGTGCTGTCGTTCAAAGGTTTGCCAGTGAAT
CAGGACAGGAAGCCATCAGAAACCATGATCCTGGAATGCCAGGCCTGGACTGGAGGAGTGCCAGCAAAGCAGTTCATGCA
GTACCCAAAGCACAACCATGCACGCTGCGACTTGTTAGGGGATTATGCATGCCTACCAAAGCCAGACTTGGAACACCCCA
CTGCTCCTGGTCATTTGTTCACACCACCTCCGCTGATCTCAATGAGTTGCAGTACGGAGATGGACGCCAGAAACTTCTCA
GATGTGAAGCCAGCCCTTGTTGACTGCATCAAGTCCTTCTCGCCGGCGTTGACATGTACAGCTGATTCGGTTTCTGTTCA
GATCAGTGACAGTGTTGTGACCTCAACAGATGCTGCTGACCGGAAGTTTTCCAGTGTGGAAGGTTTGCCTACCACTAAAG
ATTGTTACTTCGGCCAGACAAGCAACCAAGGCTCCTGGCTTCGTTCGCAAGAGGAGCCAAGCATCATATGCGGGGCGGAT
TTTGCTTCTCTGCCCGAGGATCTCCCCGGCTACCCACTTCAAGGAGGTGTCTCCTTTGAGAATGTAGGGCTGAGTAGCAT
TGATTTGTTTCACTACAACGACGCGATGATACTATCTGGGCTACAAAGTAACTGGTATGATGATCAAGACCACTTCAGCA
GCGAAACGACAGACTACCCTTTGATGGATGGATGCCTCTTTGCATAATCCCGCC-TTCTGTTCGGCCATGCCGTTTTGCG
AGGAGAGGATGGTGTTGTTTGGTATGTCTCCATATAGCACCTCTTGTAGGGCTGCAGTGTTCTAACTTGATCCTTTGGTG
GAAGGATCTAACTGTAGTAACTCCACTTTTGATAAAAATGTCTGTATTATAGACCGTGCCATGGTATAATCTATAAATAC
TCTTCGACGATCCCTCAAAGTATATATATGGAGACTGTCGAATATTTGCTTTTGGAGCCGGC-ACTGCTGTAGATTTTCT
CTCTGATGCAGCATTGCAGACTGTGTTTGCTATTGCCATTGCACATCACAGGCAAACATAACTTATACTCCCTCCGTCCC
ACAAACGATCTTATATCGTGGGACGGAGGGAGTAAGTTTCAGGTTGGTCAGACAGGTTTCTTCTTCTCCCCCCGAGGGCG
CGGAGAAAGTTACTACTACTGATCTAACATGAAAGAATTTCTTGGGTGGCGTAGCGGTCAGTAGACTTTGATGCAGTATG
ATAGTACAAACCAAAACTAATCTAGCACCTGCAAAGATGAATGGAACAGTAGAGTTGCAATCATAACCAGTTTGCATCAC
AATTGCGCTGGAACTCACTTGCTGCTGCACCAGCTGAACTGTCTGCCTCCGGCCAATCTGCTGGGCATCAATGTGCTTCC
ATTTGACTCTGTTGTGATGCTT------TGAACACTCCGGAGTGAATTTCAGTGACTGAGAAAATCATGTAA--------
---------------------------------ATTATATCCAAATTAGTCTGATTATTATTTGTTAAACACCCCGTTTA
TCGGTTGATTTATGTAAGGCGTCCACAAGCTTCAAGTTTTACGCATTGACCGACAACTAATCCGAGATTTTTACTACTCC
ATCTGTCTCAAAATGTTAGTGTCAAAAAACGTCTTACATTTTAAGATAGAGGGAG-------TAAAAACAATTTTGCTAC
TACCGTAGTGATTTTAAAACTACGGACAGGGTGTAGTATTA-CACACAAGTTTTGAACCTTACC
>chr3A_1
ATTCACTCATGCCTCGCTTAACTTTTGTGTGTGTCAGAT---------TTCTCTAAATTTGCGTCTGTCTATCACACAGT
TTTA-TTTTTATCGTTAGACTAACACATGCTATCAGGTGGACACCATGACATGGCAAAGCAAGCGCACCCATGTCGCCCG
ACGCCCTTTACGTTACTGTAATGGTTAAAGGAAGGTTTGGGAAAAAAAAAGTCAAGTTGAGGAAAACCCAAT-GAAAAGA
AGACAAGTAAGAGAGCCAGACGAGATAATGGCAATATACTGAGGTTATTTTGCGGTGGTAATAAGTTACAATGCATCAAT
CCACCTAATTTTTTTACGATGAATTAATCTCAGTTATTTTTTCTAACCCCGCAAGACTAAAGACATATTTGTTGCATTAT
GATTGAATAAACATACCGGGACTCGGTGTAATAAGAATTATTTGTAAATCCGTCACACTCATCTTCCCCATGGCTGGTTT
AGAGAATAATCTCTTCACAACAACATCC-GCAGACATACATCGGTTGCCACACTACAACATCCGCCTATCC-AAAATGCA
CTTCATCTGCATCTACAAAATTCGGCCTCCACATCCACCACCAAAGCATCACCCACTAGCCAGGAAAGCACATTATATTC
AGACAAGCTTAGCCCCTTATCTCCTATCACAAGACCCAACTTACAACTTAACAAAGCCCCATGTCAGTCAGTATGCCTAA
TAACAATAACATTTCCCAGCCATAGAGAACGGGCAGAACCATCAGAAAAGCAACACGCCTCACACCCCCACTTGATCAAA
AGTCCGCTCACGGCTCACTCGGCTCGGCTTCGTCTCTTATTCCAAAGCCATTTGTTGGGCTCGCGAGAAA-----AGCCG
CAGTCGGAATAAAGTTGGTTAAGCGCAAGCGCGCGCGCGCCAATATTAATCGGCCCCCTCCCCCTCCACTTCCCCCCAAC
CCCCGGCCCTTTTACCCGCCTCCCCACCT----TTGCCTCCCACCGCCCGCCCTCCTGCTCCCTCCCACTCCACTCGCAG
GCCCCCGCCCGCCGCGCACCGAGA--GAGGAAGGAGGGGGGCT--CGGCGCGGCGCGGCGCGGCCATGGCCGACGCGTCC
GCCTTCCCCTACGGGCTGCGCGTCCTCGTCGTCGACGACGACCCCACCTGGCTCAAGATACTCGAGAAGATGCTCCGCAA
GTGCTCCTACGAAGGTTCGAATCTTCGCCTGCTTTCCTCCTCGGGTTCCCGATCGGCTTGGCGTGGCGGCTACGCCGTCG
CCTCCCC---------------ATATGCATCCGTCCGTCGCCCATGCGTGCCTGCTGCTTGTTTAAATTACCCAGCGAAA
TCGGTTGAGAGTTGAGACTAATCGCTATAATTAAATTATTGTGTGCGTGTGCGTGTGCGTTCTGGGATTGAAGTGGACTT
TTCGGACCTTGTCGATCGAATTTAGGCTGTCTGGGGAACTTTCTTTCATAGATTTGTA---TCATCCAGCGGTTTGCCCG
CTTTTGGATTCCCCTTTTGTGTCTGTTTTTGCTTGTGTG----TGTATGTGACTGGTTGGTGTCAACCGTGAGTGACTGA
GTGCGAGCAGCAGAGGCCTTGTCCATCAAACCCTTTTTGGCTAAAAAATTTGTATAGCGAACAACATATGCATTTCGAGT
CTGTGTCCACTTTTATGTGATGATGATTGCTCAATAATTCAGATGGATATCTTTTTCTCCGC-AGAGGGGTTGGTATCAC
TGCTGAATCAGTTTTGTTTCT-TTGAGGTGCTGCGTAATTTGCTTTTGAGGCAACTCCTGTGTAATTTACCAGGAACCAC
ACATTAAAATTCAGAGCGTGTAGTTACTTCCGACGATATCTTCTTTGCGGCCTTTCACCATTTAGGTGTTATATTTCCGT
GACACCAGTGACTGGGGACTTTGAGGGCTATGTAGAAAATTCAGTTTTAACATACAGTACTTACCTGTCCTTTTGGTAGA
CCTATTGCCAATCATCACCTACTGAGT-----GGTCAGTGTTCTTAACTAACTTAACTACCAATCTATTAGCCTCTCTGT
TTTGTGTTTTGCGCCAGCGCAGAAACCATTTTTATGCCTCC-----CTATTTATGTTAATAGTCATGATTTTTGTGT---
GATGAATGATGATGAGTTATCTGTTTATCAGTTAGACTAAACTAG---TTATCTACCTGCAGTTACCACATGCGGCCTAG
CTAGAGTTGCTCTTGAAATTCTCCGGGAGAGGAAAAACAGGTTCGACATTGTGATTAGTGATGTCAACATGCCAGATATG
GATGGCTTCAAGCTTCTTGAACACATTGGACTTGAGATGGATCTGCCTGTTATAAGTTAGTATCCAACACCAAACC----
--CCTGCAATTTTCAAAGAAGAAATGATAT-TTTTATTCAGTTTGAATATCTACTCAAAACTGCCAAACTGCTCCATTCT
GTTTTCACAGTGATGTCCATTGATGGGGAGACAAGTAGGGTGATGAAAGGTGTGCAGCATGGTGCTTGCGATTACCTCCT
TAAGCCTGTTCGGATGAAGGAACTCCGGAACATTTGGCAACATGTATACAGGAAGAAAATGCACGAGGTTAAAGAGATCG
AAGGTCATGATAGCTGTGATGATCTCCAGATACTAAGATATGGTTTCGAGGGATTTGATGAGAAGGGCCTATTTATGACA
GTTGATTCCGATCCCACGAGGAAGAGAAAAGACATGGACCACGGAGATCAGGACTCCAGTGACGGTGCTACTGCTAAGAA
GGCTAGAGTAGTCTGGTCTGTTGATCTGCATCAGAAGTTTGTAAATGCTGTGAACCAAATTGGATTCGACAGTGAGTGCT
CTCTGAAATATCAGTTACCTTCCTATATATT-----------------------TATCAGTTACCTTCCTATAAATTTAT
CAAATCAGCATGATCCTCATTCCAAAAGAGC-AATGCCGTCATTTTGCAGAAGTGGGGCCGAAGAAAATATTGGACCTGA
TGAACGTGCCGGGCTTAACAAGAGAGAATGTTGCTAGCCATCTTCAGGTATGACATG--ATGTTCAAATGGCAAATTTCT
ATGGTCTCTTTTCTTGAAAAAGGAACCGAGTTCATAAAGAGGGCGTTAAATCAGATTTTTAATAAAATCAAGAAAGTTTG
TATACAGGACACACTAAATTCAGATAACTGCACCATGACTTTTCTCCAACTCCCTATACCTGGTGTGTCATGACAAATTT
GGGCAACTTTGAAACTCACAAATCAGGCGTATGAATAGCAGTAAAATTGGAATTTATAATCTGATGCAGGTAGTTTCTCG
TGCAATAAAGGATCACCTTTTTA--AAATAACACAAGATCACCTTTGTCAGAGTTCCCCCTAGAAGTAAGTGAAAGGAGA
TTCTTGGTTCAGTAAATGACACAA-AAAGGGATGTTATGGTGTTGCAATGAGTTCCCGCCATGTGCATTCTTTCCCTGTG
CCATGTTCATGGGTTATGACAAAGCTCCTATTTGATCATTGGTCGAGCTACTGTAGGAACATATACTTTCTGAGTAGCTC
CCTTGCA----AAAATACTTTTTTGCAGTTTATATTAACCTGAATCCTTACCTTTAACTGTCAAATATCACATACTCAAA
ATG-CATACAAATTCATGTGAATTCTGAAGCACTTACCCAACACTCTAGAATTCAGGTAAAATCATTGTATTCCTGAAAA
CTAAGGAATGGTTTTCTAGTATTCATCAGAAGAAAATTCGTTGTTAATGCAGAAATATCGCCTATACTTGGGGAGGCTGC
AAAAGCAGAATGAGGAAAGGATATTGGGCTCTGGCAGGCAAGATTTCAGCACTAAGGGACCATCATCAGAGAACCTTAAC
CTCAGAAGCTCCTTCCAAGAGCAACCAAGCAACACTTCCAGTGGATATCCGCATGCTTCCCAGAAGATACAAGGCCAGAG
CAGTTTGTCAGATTCTCAGTTAGAAGAAACCAAGCGCACGGTCCCCTTACCGGCGCCAGATAGAAGCATGAATTCTGTAA
GTTCAGCTGCCGAACCTCAGAATGTCGCCGGTGTTTCACCAATAGGCGGCGTGCTGTCGTTCAAAGGTTTGCCAGTGAAT
CAGGACAGGAAGCCATCAGAAACCATGATACTGGAATGCCAGGCCTGGACTGGAGGAGTGCCAGCAAAGCAGTTCATGCA
GTACCCAAAGCACAACCATGCACGCTGCGACTTGTTAGGGGATTATGCATGCCTACCAAAGCCAGACTTGGAACACCCCA
CTGCTCCTGGCCATTTGTTTACCCCACCGCCGCTTATCTCAATGAGTTGCAGTACGGAGATGGACGCCAGAAACTTCTCA
GATGTGAAGCCAGCCCTTCTTGACTGCATCAAGTCCTTCTCCCCGGCGTTGACATGTACAGCTGATTCGGTTTCTGTTCA
GATCAGTGACAGTGTTGTGACCGCAACCAATGCTGCTGACCGGAAGTTTTCCAGTGTGGAAGGTTTGCCTAGCACTAAAG
ATTGTTACTTCGGCCAGACGAGCAACCAAGGCTCCTGGCTTCGTTCGCAAGAGGAGCCAAACATCATATGCGGGGCGGAT
TTTGCTTCTCTGCCCGAGGATCTCCCCGGCTACCCACTTCAAGGAGGTCTCTCCTTTGAGAATGTAGGGCTGAGTAGCAT
TGATTTGTTTCACTACAACGACGCGATGATACTATCTGGGCTACAAAGTAACTGGTATGATGATCAAGACCACTTCAGCA
GCGAAACGACGGACTACCCGTTGATGGATGGATGCCTCTTTGCATAATCCC-CC-TTCTGTTCGGCCATGCCGTTTTGCG
AGGAGAGGATGGTGTTGTTTGGTATGTCTCCATATAGCACCTCTTGTAGGGCTGCAGTGTTCTAACTTGATCCTTTGGTG
GAAGGATCTAATTGTAGTAACTCCACTTTTGATAAAAATGTCTGTATTATAGACCGTGGCATGGTATAATCTATAAATAC
TCTTCGAGGATCTCTCAAAGTATATATATGGAGACTGTCGAATATTTGCTTTCAGAGCCAGC-ACTGCTGTAGATTTTCG
CTCTGATGCAGCATTGCAGACTGTGTTTGCTATTGCCATTGCACATCACAGGCAAACATAACTTCTACTCCCTCCGTCCC
ACAAACGATCTTATATTGTGGGACGGAGAAGT------------------------------------------------
-------------TACTACTGATCTAACACAAAAGAATTTCTTGGGTGGGGTAGCGGTTAGTAGACTTTGATGCAGTATG
A---TACAAACCAAAACTAATCTAGCATCTGCAAAGATGAATGAAACAGTAGAGTTGCAATCATAACCAGTTTGCATCAC
AATTGCACTGGAACTCACTTGCTGCTGCACCAGCTGAACTGTCTGCCTCCGGCCAATCTGAGC---------GTGCTTCC
ATTTGACTCTGTTGTGATGCCAAAAGTATGAACACTCCGGAGTGAATTTCGGTGACTGAGAAAATCATGTAA--------
---------------------------------ATTATACCCAAATTAGTGTGATTATTATTTGTTAAACACCCCGTTTA
TCGGTTGATTTATGTAAGGCGTCCACAAGTTTCAAGGTTTACGCATTGGCCGACAACT------AGATTTTTACTACTAC
CTCTGTCTCAAAATGTTAGTGGGCAAAAATGCCTTACATTTTAAGACAGAGGGAGTATTTAATAAAAACAATTTTGCTAC
---CGTAGTGATTTTGTAACTGCGAACAGGGTGTAGTATTATCACACAAGCTTTGAACCTTACC
>chr3D_305
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTGCATTAT
GATTGTATAAACATAC-GGGACTCCGTATAATAATAATTA-TTGTAAACCCGTCAAACTCATCTTCCTCGTGACGGGTTT
AGAGAATAATCTCGTCACAATAACAACCAACAGACATACATCGGCTGCCATACTACAATATCCGCCTATCCGAAATGCAC
--TCATCTGCATCTACAGAATTCGGCCTCCACATCCAGCACCAAAGCATCACCCACTAGCCAGAAAAGCGCATTATACTC
GGACAAACTTAGCCCCTTATCTCCTATCACAAGACCCAACTTACAACTTAACAAAGCCCTATGTCAGTCAGTATGCCAAA
TAACAATAACATTTCCCAGCCATAGAGAACGAGCAGAACCATCAGAAAAGCAACACGCTTCGCACCCCCACTTGATCA-A
GGTCCGGTCACGGCTCACTTGGCTCGGCTTCTTCTCTTATTCCAGAGCCGTTTGTTGGGCTCGCGAGAAA-----AGCCG
CAGTCGGAATAAAGTTGGTTAAGCGCGCAAGCGCGCGCGCCAATATTAATCGGCCCCCTCCCCCTCCACTTCGCCCCAAC
CCCCGGCCCTTTTACCCGCGCCTGCCCACCACCTTGCCTCCCACTG--------CCTGCTCCCTCCCACCCCACTCGCAG
A-CCCCGCCCGCCGCGCACCGAGG--AAGGAGGGAGGGGGGGCTCA------GCGCGGCGCGGCCATGGCCGACGCGTCC
GCCTTCCCCTACGGGCTGCGCGTCCTCGTCGTCGACGACGACCCCACCTGGCTCAAGATACTCGAGAAGATGCTCCGCAA
GTGCTCCTACGAAGGTTCGAATCTTCGCCTGCTTTCCTCTTCGGGTTCTCGATCGGCTTGGCGTGGCGGCTACGCCGTCG
CCTCCTC---TCCTGTGGGTGTATGTGCATCCGTCCGTCGCCTATGCATGTCTGGTGCTTGTTTAAATTACCCAGTGGAA
TTGGTTGAGA-------CTACTCGCTATAATTAAATTATTGTGGGTGTGTGTGTGTGCGTTCTGGAATTG-AGTGGACTT
TTCGGACCTTGTCGATCGAATTTAGGCTGTTTGGGGAACTATCTTTCATAGATTTGTAGTATCATCCAGCGATTTGCCTG
CTTTTGGGCT-CCTTTTTGTGTCTGTTTCTGCTTGTGTAT--ATGTATGTGACTGGTTGGTGTCAACCGTGAGTGACCGG
GTGGGAGCAGCAGAGGCCTTGTCCATTT-ACCCTTTTTGGCTAAAATTTC-GTATAGCGAACAACATATGCATTTCGAGG
CTGTGCCCACTTTTAGGTGATGATGATTGCTCAATTATTTGGATGGATGTCTTGCTTCTCCAGAGAGCAGTTGGTATCAC
TGCTGCATCAGTTTTGTTTCTTTTGAGGTGCTGCGTGATTTGCTTTTGAGGCAACTCCTGTGCAATTTACCAGGAACCAC
GCATTAAAATTCAGAGCGTGTAG----TTCCGATGATATCTTCTTTGCAGTCTTTCACCATTTAGGTGTTATATTTCTGT
GACACCAGTGACTGGGGACTTTAAGGGCTATGTAGAAAATTCAGTTTTAACATACAGTACTTACCTGTCCTTTTGGTAGA
CCTATTGCCAATTATCAC-TACTGAGTGGTCAGGTCAGTGTTCTTAACTAACTTAACTACCGATCTATTAGCTTCTCCGT
TTTGTGTTTTGCGCCAGCGCAGAAACCAGTTTTATGCCTCC-----ATATTTATGTTAATAGTCATGATTCTTTTTGTGC
GATGAATGATGATGAGTTATCTGTTTATCGGTTAGACTAAACTAGTTATTATCTACCTGCAGTTACCACTTGCGGCCTAG
CTAGAGTTGCTCTTGAAATTCTCCGGGAGAGGAAAAACAGGTTCGACATTGTGATTAGTGATGTCAACATGCCAGATATG
GATGGCTTCAAGCTTCTTGAACACATTGGACTTGAGATGGATCTACCTGTTATAAGTTAGTATCCAACACCAAATCTGTC
TTCCTGCAATTTTCGAAGAAGAAACGATATATTTTATTCAGTTTGAATATCTACTCAAAACTGCCAAACTGCTACACTCT
GTTTTCACAGTGATGTCCATTGATGGGGAGACAAGTAGGGTGATGAAAGGTGTCCAGCATGGTGCTTGCGATTACCTCCT
TAAGCCCGTTCGGATGAAGGAACTCCGGAACATTTGGCAACACGTATACAGGAAGAAAATGCACGAGGTTAAAGAGATCG
AAGGTCATGATAGCTGTGATGATCTCCAGATACTAAGATATGGTTTCGAGGGATTTGATGAGAAGGGCCTATTTATGACA
GTTGATTCCGATGCCACGAGGAAGAGAAAAGATGTGGACCACGGAGATCAGGACTCCAGTGACGGTGCTACTGCTAAAAA
GGCTAGAGTAGTCTGGTCTGTTGATCTGCATCAGAAGTTTGTAAATGCTGTGAACCAAATTGGATTCGACAGTGAGTGCT
CTCTGAAATATCAGTTACCTTCCTATATATTTATCAGTTACCTTCCTATATATTTATCAGTTACCTTCCTATAAATTTAT
CAAATGAGCATGATCCTCATTCCAAAAGGGCAAATGTCGTCATTTTGCAGAAGTGGGGCCGAAGAAAATATTGGACCTGA
TGAACGTGCCGGGCTTAACAAGAGAGAATGTTGCTAGCCATCTTCAGGTATGACATG--ATGTTCAAATGGTAAATTGCT
ATGGTCTATTTTCTTGAAAAAGGAACCGAGTTCATAAAGAGGGCGTTAAATTAGATTTTTAATAAAATCAAGAAAGTTTG
TATACAGGACACACTAAATTCAGATAATTACACCATGACTTTTCTCCAACTCCCTATACCTGGTGTGTCATGACAAATTT
GTGCAACTTTGAAACTCACAAATCAGGTGTATGAAAAGCAGTAAAATTGGAATTTATAATCTGATGCAGGTAGTTTCTCG
TGCAATAAAGGATCACCTTTTTTTTAAATAACACAAGATCACCTTTGTCAGAGTTCCCCCTAGAAGTAAGTGAAAGGAGA
TTCTTGGTTCAGTAAATGACAGAA-AAAGGGATGTTGTGGTGTTGCAATGAGTTCCCGCCATGTGCATTCTTTCCCTGTG
CCATGCTCATGGGTCATGACAAAGCTCCTATTTGATCATTGGTCGAGCTACTGTAGGAACATATACTTTCTGAGTAGCTC
CCTTGTA----AAAAAACTTTTTTGCAGTTTATATTAACCTGAATCCTTACCTTTAACTGTCAAATATCACATACTCAAA
TTTACATACAAATTCATGTGAATTCTGAAGCACTTACCCAACACTCTAGAATTCAGGTAAAATCATTGTATTCCTGAAAA
CTAAGGGATGGTTTTCTAGTATTCATCAGAAGAAAATT----GTTAATGCAGAAATATCGCCTATACTTGGGGAGGCTGC
AAAAGCAGAACGAGGAAAGGATATTGGGCTCTGCTAGGCAAGATTTCAGCACTAAGGGACCATCATCAGAGAACCTTAAC
CTCAGAAGCTCCTTCCAAGAGCAACCAAGCAACACTTCCAGTGGATATCCACATGCTTCCCAGAAGATACAAGGCCAGAG
CAGTGTGTCAGATTCTCAGTTAGAAGAAACCAAGCGCACGGTCCCCTTACCGGCGCCAGATAGAAGCATGAATTCTGTAA
GTTCAGCTGCCGAACCTCAGAATGTTGCCGGTGTTTCACCAATAGGCGGCGTGCTGTCGTTCAAAGGTTTGCCAGTGAAT
CAGGACAGGAAGCCATCAGAAACCATGATCCTGGAATGCCAGGCCTGGACTGGAGGAGTGCCAGCAAAGCAGTTCATGCA
GTACCCAAAGCACAACCATGCACGCTGCGACTTGTTAGGGGATTATGCATGCCTACCAAAGCCAGACTTGGAACACCCCA
CTGCTCCTGGCCATTTGTTTACACCACCGCCGCTTATCTCAATGAGTTGCAGTACGGAGATGGACGCCAGAAACTTCTCA
GATGTGAAGCCAGCCCTTCTTGACTGCATCAAGTCCTTCTCCCCGGCGTTGACATGTACAGCTGATTCGGTTTCTGTTCA
GATCAGTGACAGTGTTGTGACCTCAACCGATGCTGCTGACCGGAAGTTTTCCAGTGTGGAAGGTCTGCCTAGCACTAAAG
ATTGTTACTTCGGCCAGACAAGCAACCAAGGCTCCTGGCTTCGTTCGCAAGAGGAGCCAAGCATCATATGCGGGGCGGAT
TTTGCTTCTCTGCCCGAGGATCTCCCCGGCTACCCACTTCAAGGAGGTGTCTCCTTTGAGAATGTAGGGCTGAGTAGCAT
TGATTTGTTTCACTACAATGACGCGATGATACTATCTGGGCTACAAAGTAACTGGTATGATGATCAAGACCACTTCAGCA
GCGAAACGACGGACTACCCGTTGATGGATGGATGCCTCTTTGCATAATCCC-CCCTTCTGTTCGGCCATGCCGTTTTGCG
AGGAGAGGATGGTGTTGTTTGGTATGTCTCCATATAGCACCTCTTGTAGGGCTGCAGTGTTCTAACTTGATCCTTTGGTG
GAAGGATCTAATTGTAGTAACTCCACTTTTGATAAAAATGTCTGTATTATAGACCGTGCCATGGTATAATCTATAAATAC
TCTTCGATGATCTCTCAAAGTATATATATGGAGACTGCCGAATATTTGCTTTCAGAGACGATAACTGCTGTAGATGCTCT
CTTGGGAGCAGCATTGCGGACTGTATGTGATATTTTCATTGCACATTACAGGCAAACACTCCAACTTTTCG---------
-----------------------------------GTTTCAGGTTGGCCAGGCAGGTTTCTTCTTCTCCCCACGACTG--
------------------CTGATCTAACCTGAAAGAATTTCTAAGGTGGTGTAGCGGTCAGCGG----------AGTTTG
A---TGCAAACCAAAACTAATCTAGCAGCTGCAAAG------------------TTGCAATCATAACCAGTTTGCATCAC
AATCGCACTGGAACTCACTTGCTGCTGCACCAACTGAACTGTCTGCCTCCGGCCAGTATGCAGGACATCAGTGTG-----
---TGAGTCTGTTGTTATGCCAAGAATATGAACACTCCGGAGTGAATTTTTGTGACCGACAAAATCATGTACTCCTCTGT
CTCAAAATTTAAGGCGTTTTTTAACAATGGTACATTATCCCCAAATTAGTG-----------------------------
TCGGTTGATTTATGTAAGGCGTCCAAAAGTTTCAAGGTTTACCCATTGACCAACAATAATCCAATATTTTTTACTA----
--------------------------------------------------------------------------------
----------------------------------------------------------------
>SNPs
-----S---------S----------S-S-----SSSSSSSSSSSSSS---------SS--SS-------------S---
----S-----------------------S----S----------------------------S-SS--------SSS---
--S---S---------S--------------S--S------S-----S---S---------------S----S-----S-
-S---------------S-S-----------S----S----SSS--S--S-------------S--------SS------
--------------------------------------------------------------------------------
-----------------S------SS------------------------------------------------------
-------------S--------------S---S--------------S------S---------S-----S---------
-----------------------S-----S-------------------S------------------------------
-------------S-------------------------------------------------S----------------
-------------S---------------S-------------------------------------------S------
----------------------------------------------------------------------SSSSS-----
--------------------------------------------------------------------------------
----S---------------------------------------------------S-----------------------
------------------------SS------------SS-SSSS-------------------------------S---
--------------------------------------------------------------------------------
------------------------S----------------------------------------S---------S----
-------SSS----------------------------------------------------------------------
-----S--------------------------------S--------------S-------------------------S
----------------------------------------S-----------------SS---S----------------
----------------------------------------SS----S--------------------S------------
---------S----------------------------------------------------------------------
-----------------------------------------------------------------S-----S---S----
-S---------------------------------------------S--------------------------------
------------------S------------S--S---------------------------------------------
----------S------------S---------SS-----------------S--------------------S-S----
---------------------------------S-----S-----------------------S----------------
--------S--------------------------------SSSSS-----------------------S------S---
----S----------------------------------------------------------S----------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
---------S-S-SSS-S--------------------------------------------------------------
---------------------------------------------------------------------S----------
---------------------------------------------------------SS-----------S---------
---------------------------------------------------------------------------S----
-----------S--------------------------------------------------------------------
--------------S---------------S----S------------------------S-----------------S-
---------------------S-------S-------------------------S--------------S---------
----------S-------------S--------------S-------------------------S-------S---S--
S---------------S---------S---S-----S------S--------------S----SSS---SS-S-SSS-SS
S--SS-SSSSS-----S---S------S-----------S-S--------SSS---------------------S-----
---S---------S----------S-------SS-SS--------S---S-----S-------------------S---S
--S-S----SS-S----S--------SS-----------S-----------------------S--------S-------
--------------------S--S----------------------------S-----S---------------------
--------------------------------------------------------------------------------
---------S-----------S----------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S--------S--------S-----S---------------------------------------------
------------------S----------------------S--------------------------------------
---------------------------S-------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S--------S-------------------------------S----------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
-------S----S---------------------------------------SS--------------------------
----------------------------------------------------------------S---------------
----------------S-----------SSSSSSS------------S---S-------------------S---SS-SS
SSSSSSSSSSSSS------------------------------------S------------------------------
-SSS-----------------------S---------------S------------------------------------
------S------------------------------------------------------S--S-----S---------
--------------------SS----------------------------S-----------------------------
---------------------------------------S----------S-----------------------------
-----------------------------S------S----------------------SS-SS--------------S-
S--------------------SSS-----S-S--------------S---------------------------------
SSS------------SS----S--S-------------------------S-------------
>forward_545
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---------------------------------------------TGACACACTGCAACATCCGT---------------
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>reverse_1440
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-------------------------------------------------------------------------------G
TTCGGACCTTGTCGATCGA-------------------------------------------------------------
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>forward_1082
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-----------------------GGAGAGGAAGGAGGGCTGA--------------------------------------
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>reverse_2463
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--------------------------------------------------------------TCCAAACTGCTCCACTCT
GT------------------------------------------------------------------------------
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>forward_1872
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------------ATTCAGAGCGCGTAGTTCCA------------------------------------------------
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>reverse_3480
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---------------------------------------ATGTTGCAATGAGTTCCCGC---------------------
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>forward_1875
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---------------CAGAGCGCGTAGTTCCAACA---------------------------------------------
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>reverse_3893
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----------------------------------------------------CAAGGGGCCATCATCAGAGA--------
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>forward_3506
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----------------------------------------------AATGAGTTCCCGCCATGTGT--------------
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>reverse_5185
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----------------------------------------------------------------ATACTCCCTCCGTCCC
ACAA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
