CLUSTAL X (1.81) multiple sequence alignment input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 TGAGCATCACTACTAGCTCATTGCTTTCATCAAATTGGAAACACATATTT chr4A_47 ----------------------------------------------ATTT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 TTGGCT-------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 GTCGTAACGGTCGA------------------------------------ chr3D_4313 ------ACGGTCGA------------------------------------ chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -SS---S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 TCAAGAAGGCAAAAGTCAAGGTTCTTCGCTTTGCAACGAAATAAACCACA chr4A_47 TCAAGAAGGCAAAAGTCAAGGTTCTTCGGTTTGCAAAGAAATAAATCACA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ----------------------------S-------S--------S---- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 TGCTCCACTGCATGTGCAAGTACACAGAAAATACAAAGTTTTAGGTACAC chr4A_47 TGCTTCACTGCATGTGCAAGTGCACA------------------------ chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ----S----------------S----SSSSSSSSSSSSSSSSSSSSSSSS forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 ACAGGTAAATAGTAACTCCTGTTTCTTACAGAGCACAACCATACAGATGC chr4A_47 -CAGGTAAATTGTAACCCCTGTTTCGTCCAGAGCAGAACTGTACGGATGC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs S---------S-----S--------S-S-------S---SS---S----- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 ATTAAATGAAAATCTCTATACGCATACTACACATATGTATATTTTATGTA chr4A_47 ATTAAATGAAAATCTATATACGCATACTACACATATGTATATTGCATGTA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ---------------S---------------------------SS----- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 GATTTTTCAAGGTCTTTTTGACATTTAAAAACGTTGTATTAGTTGTTTTG chr4A_47 GAATTTTCCAGGTCTTT---------------------TTAGCTGTCTTG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs --S-----S--------SSSSSSSSSSSSSSSSSSSSS----S---S--- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 GAAACCTCATTTCGTTTTTGATCCTTGCGCCCTTCATCCGTTGTAGTTGT chr4A_47 GAAACCTCATTTCGGTTTTTCTTCCGTTCGCCCATTATCCC-----TTGT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs --------------S----SS-S-SSSSSS--SSSSSS-SSSSSSS---- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 ACAATGCAAATATAAATGTTCAAATTAATT-TAATCCCATGAACAGCTCT chr4A_47 AGAATGTAAATATAAATGCTCTAAATTAATGTAATCCCGTGAACAGCCCC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -S----S-----------S--S--S-S-S---------S--------S-S forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 GGAGCCAGAGGAGACCAATCCAGTATTCTATTATCTTAGGGAAACATAAA chr4A_47 GCAGCCAGAGGAGAGCAATCCAGTGTTTTTTTTTGTTTGTAATGTTGGCA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -S------------S---------S--S-S--S-S--S-SS-SSSSSSS- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 CACATGCCACATCATCACAGGCCCACCACAAAATGCACGCAAACTACTTC chr4A_47 GGAAAGTGACAAATTCATTGGTTAGAAAGGGGTGTTGCAAAAGGCCAACA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs SSS-S-SS---SSS---SS--SSSSSS-SSSSSSSSS-SS--SSSSSSSS forward_485 ---------------CACAGGCCCACCACAAAATG--------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 TCACTGTTAGTTGATCCCCGCCGATTCTATTTATTTCAACA--------- chr4A_47 TGCCTAGCAATGTACAAATAACAGGAGAAAACTCAGACATGAGAGCGGTT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -SS--SSS-S-SS-SSSSSSS-SSSSSS-SSSSSSSSS-SS--------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -----GTTAGTTGATCCCCGCCGAT------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 AGACTCTTTCGAACCATGTTTATTTCAAATAAAGATATAAACACTGAAAA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 AGAAATACAGCAAGATCTAATGTATTTCTTTTTCAGTGTTTATATCTGTA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 TTCATCTGGTTAGACTCTTTCGAACCATGTTTGCCAATAAATAGCTCGCT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 GTAATTGTTTTTTCATTTTTTGTTTTTTTCTTCTGAAATCTCAGTGATTC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 ACAGTGTTATCACTTATCACGTCGAGTCATGGGCTTCATGTACGACATAT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 CTTACCAAACACAAGTGGTAGGGATGATAATGGCCAAAACCGTCTACAAA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 ACCAGCTATATAGGATATGGTAAGAGCTTTTAGCTTCCAGATACAGTCCC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 ATTTGAATTATAGTTTGGTTGTTGTTCCTAATATACCACAATGTAGGATA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 ATCAATTTATTAGTCAGATTACCAGGCCCTTCAAATATGGCTATCTGATT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 TTTTAGTTACATTTTATTTATTAAAATTTATTAGGAACAATAAAAAACAT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 ATTAGTTAAATTATATGGTCATGTGATTGAACTTACTTGCCATTGTGTTG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 TGTTGCAGTTATGCGTCCAACTGTCGAGAAATAACCCCAACAGATGGGTG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 CTTTTTGTGGAAGCGAAATGTTGGCTCTCGGGTGCCAGCGCACCCTATAT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 GCGCATTTTTAATAATTTCAGAAAAGATTAAAAAATCCGAATCTTTTTGG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 CATCAAATATGATCAAGTATTGTACTCATATAAAAAGCTTGGCCAACGAA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 TGATTCCTGTTGACTTCAGGGCAAGAAAAACAAATTTATGATGCCAATAT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 AGCAAAAACAATACTTTGTATACAGCGGTTTTTGGCAAATCTCTGACCTA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 GGATACAATGAAAATCATTCCCTCGTGAATCTTTTTATACGAGTACAATG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 CTTGATCATGTTTGATTCAATAAGTTTCGGAATTTTATGATTTCCTTTTA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 ATTACTAAATTAATTTTGAATATAGGGGGCTGGCACCCGAGAGCACAAGT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 GTATTTCTCGTTTATTGTTTTCATTCTTACTGCCAACATGGGAATTTATA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 GAAATGTTCATTAAAAGGGATAAAGACCTCAACACATGATCTATTCTCTA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 GCATAAATATTATTTGTGAGCTTTCTAGAAAATGGTGGAGACAAGGAACC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 ATATTTGCTATGCTTGGTTTACCAAGTCTTGAACCTAGCAACAATCTTGT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 CACTGCTACATTTGAGAGATGTTTTTCGACCATGAGAATTGTAAATATAT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 TTGCTCTACACACACACACACAGAGAGAGAGAGAGTAATGATGCGGTCAT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 GAAAGAATATTGGGGCCTATTTGGAAGGGTCACGCTACTCGTCGGCTGGC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 GGATCTTTCTAAAAGATCCGCCGCCTCGGCAACTTTTAGATCCAGAGCGA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 TGAAAAATCAGATGGAACGTCCATACCATGCAACATGGGCAGTGTTGCAG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 AATTCTTTGCAACAAAGCTTATTACATTGCAGAAACCTTTTGCGACATAG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 GTGAATGATTTTTTTTCTTCACTATTTTTGCAACATGGGTGTTGTCTTGG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 AAGAAAATTCGCAACACAGGTAATGTTGCACAAATTTACAGTTTTTTTTG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 TCTTTAATTTTTTTTTGCAACATGGATTTTGTTGCAGAAGGCAATTTTGT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 AATACATATGATGTTGCAGAATGTTTTTTGTAAAAAAAAGAGACATGTAA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 ATGACACATCACACACAGAAGAAGTGGCGGATCACTCCGGTGAGATCCGC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 CAGCTGAAGGCAAGCGCTTTCCTATTTTGAATGTAATGCTCTTAATTTTA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 GGCACAATTGCACAAGTCTATTTAATATGTCACTAGGTGATTTTTTTTAT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 ---------------------TGCCACCGCTAATAATATTTGCTTCCATA chr4A_47 CGAGATCCACTCTCTATAATTTGCCACCGCTAATAATATTTGCTTCCACA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ------------------------------------------------S- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 AGTTAGAGTTTGGTATACTTTGTTGCTCAAGTACATTCAACTAATATCTC chr4A_47 ACTTAGAGTTCAGTATACTTTATTGCTCAAGTACATTCAACTAATATCTC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -S--------SS---------S---------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 AAGCGGAACACTTAACTTTGGTGAGCATTTCTACTG------TTGGACAT chr4A_47 AAGTGAAACACTTTATTTTGGGGAGCACTTCTACTGGACATATTAGACAT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ---S-S-------S-S-----S-----S----------------S----- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 TTTTTATCGTTGAGTATTTTACTTTTATGCCTAACATTACTTGATATTCA chr4A_47 TTTTCATCGCTGAGTATATTACTTTTATGTATAATATTACTTGATATTCA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ----S----S-------S-----------SS---S--------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 CATGCATAATGCACGCGTGGACACCCAGAAATTTTTGTCCCAAGTCCGCG chr4A_47 CACGCATAATGCACACGTGGACACCCGGACGTTTTCACCCCAAGTCCGGG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs --S-----------S-----------S--SS----SSS----------S- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 CCGTTGATCAACTTTGTGAATGGCACCAAGACCGCCAATTCTCGGACATC chr4A_47 CCATTGATCAACTTTGTGAATGGCACCAAGACCGCCAATTCTCGGACATC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs --S----------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 ACAGCAAAATCCCGAGCATTGAGGTTAATAGTTTTGGCTATCCTGCGCTC chr4A_47 ATAGCATAA-CCCGAGTATTGATGTTAATAGTTTTGACTATCCTGAGCTC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -S----S--S------S-----S-------------S--------S---- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 CCTCCTGTTAGCAGATTATTTT-CTGACGTATTAAAAGCAGCGGGCTTAT chr4A_47 CCTCCTGTTAGCAGATTATTTTTCTGACGTATTAAAAACAGCGGACTTAT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------S------S----- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 TTCTAAACACTGTTAACGTTGTAAAGCTAAAGTGAAAATCCGCCGCC--- chr4A_47 TTCTAAACACTGTTAACATTGTAAAGCTAAAGTGAAAGAGTAATGCTAGA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -----------------S-------------------SSSSSSS--S--- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 CACACGGGCTTTTACAGGGGATTTACTTAGTGGTTAGGATTTGATTGGTT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 GAGGTTTAATTAAGTGAGGCTGGCCCATCACTTGAAATTAGGAGGAGCCA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 ATTAGAGGAGGGAAGGCAATGAGTCCGTGAAAGTCCGTTGTTCCTTTGCC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 CGTGAGTCTAGTATTATCGACAGTGAAACAAAAATGCTACATCGACGGGC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 ATATTACGGATTTACGGGCCATCAAGAATTGACGACTCGAAAGCCAAAAC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 TAACCCAATAGAACCATGTAAGAGTCCGTGCATGTAGCATTGCCCAAGTG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 ---------------GCAGCCCAGCTCTATAAAAAACGTGCTGGCTCACT chr4A_47 AAAACCCCGGTCACGGCAGCCCAGCTCTATATAAACCGCGCTGGCTCACT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------S---S--S----------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 ------ATGCATCCAGAGTCCACCAATTTTTGTTTCTTGCAGTGCTCGAG chr7D_1_TraesCS7D01G009700 CACTTCATGCATCCAGAGTCCACCAATTTTTGTTTCTTGCAGTGCTCGAG chr4A_47 AACTTCATGCATCCAGAGTCCACCAATTTTTGTTTC-----------GAG chr7D_1029 ----------------------------------TCTTGGAGTTCACGAG chr7A_1029 ----------------------------------TCTTGGAGTTCACGAG chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs S--------------------------------------S---S-S---- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CGGCGCCGCGATGGAGTCACACGCCGTTCCTAGCGAGCAGCCCGCGTACA chr7D_1_TraesCS7D01G009700 CGGCGCCGCGATGGAGTCACACGCCGTTCCTAGCGAGCAGCCCGCGTACA chr4A_47 CGGCGCCGCGATGGAGTCACACGCCGTTCCTAGCGAGCAGCCCGCGTACA chr7D_1029 CGGCGCTGCGATGGGGTCACACGGCAAGCCACCGCTACCGTACGCGTACA chr7A_1029 CGGCGCTGCGATGGGGTCACACGGCAAGCCACCGCTACCGTACGCGTACA chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 AGCCGCTGCCATCCACCGTC---AACGAGGACGCCCATGAGCATCAGAGC chr7D_1_TraesCS7D01G009700 AGCCGCTGCCATCCACCGTC---AACGAGGACGCCCATGAGCATCAGAGC chr4A_47 AGCCGCTGCCATCCACCGCC---AACGAGGACGCCCATGAGCACCAGGGC chr7D_1029 AGCCGCTGCCCTCCGGCGCCGCCGCCGCCGACGCCGATGGTGAGCGGACC chr7A_1029 AGCCACTGCCCTCCGGCGCC---GCCGTGGACGCCGACGGTGAGCGGACC chr4A_1141 -------------------------------------------------C chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ------------------S------------------------S------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GGCGGCATGAGGTGGCGTGCGTGCGCTGCCTTGCTGGCGGCCTCAGCCGT chr7D_1_TraesCS7D01G009700 GGCGGCATGAGGTGGCGTGCGTGCGCTGCCTTGCTGGCGGCCTCAGCCGT chr4A_47 GGCGGCGTGAGGTGGCGCGCGTGCGCTGCCGTGCTGGCGGCCTCGGCCGT chr7D_1029 GGCTGGACGAGGTGGCGCGTGTGCGCCACCGTGCTGACGGCCTCGGCCA- chr7A_1029 GGCTGGACGAGGTGGCGCGTGTGCGCCACCGTGCTGACGGCCTCGGCCA- chr4A_1141 GGCTGCACGAGGTGGCGCGTGTGCGCCGTCGCGCTGACGGCCTCGGCCA- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -----------------S------------S-------------S----- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GGTGCTGGTGGTGGTGCTGGTCACCGCCACCACGCCGGGAGGAGGAGCCA chr7D_1_TraesCS7D01G009700 GGTGCTGGTGGTGGTGCTGGTCACCGCCACCACGCCGGGAGGAGGAGCCA chr4A_47 GGTGCTC------------GTCGCCGCCACCACGCTAGGAAGAGGAGCCA chr7D_1029 -----TGGTGGTGGTGGTGGTCGGCGCCACGCTCCTGGCAGGGTT---CA chr7A_1029 -----TGGTGGTGGTGGTGGTCGGCGCCACGCTCCTGGCAGGGTT---CA chr4A_1141 -----TGGTGGTGGTGGTGGTCGGCGCCACGCTCCTGGCAGGGTT---CC chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ----------------S-----S------------S-------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GGGTGGACCAGGCGTCGGTCAATGGCGCCGACGAGGATGCC---GGCGGG chr7D_1_TraesCS7D01G009700 GGGTGGACCAGGCGTCGGTCAATGGCGCCGACGAGGATGCC---GGCGGG chr4A_47 GGGTG------------------------GACGAGGACGCC---GGCGGG chr7D_1029 GGGTGGACCAGGC------------CGTCGACGAGGAGGCGGCGGGCGGG chr7A_1029 GGGTGGACCAGGC------------CGTCGACGAGGAGGCCGCGGCCGGG chr4A_1141 GGGTGGACCAGGC------------CGTCGATGAGGAGGCGGCGGGCGGG chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------SSSSSSSSSSSS--S---------S------------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TTCCCGTGGAGCAACGAGATGCTGCAGTGGCAGCGAGCCACGTTCCATTT chr7D_1_TraesCS7D01G009700 TTCCCGTGGAGCAACGAGATGCTGCAGTGGCAGCGAGCCACGTTCCATTT chr4A_47 TTCCCGTGGAGCAACGAGATGCTGCAGTGGCAGCGAGCCGCGTTCCATTT chr7D_1029 TTCCCGTGGAGCAACGAGATGCTGCAGTGGCAGCGCAGCGGCTACCATTT chr7A_1029 TTCCCGTGGAGCAACGAGATGCTGCAGTGGCAGCGCAGTGGCTACCATTT chr4A_1141 TTCCCGTGGAGCAACGAGATGCTGCAGTGGCAGCGCAGTGGCTACCATTT chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ---------------------------------------S---------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CCAGCCCGAGAAGAACTTCATGAGCGGTACGTGACTAGTTAATTTCCCCT chr7D_1_TraesCS7D01G009700 CCAGCCCGAGAAGAACTTCATGAGCGGTACGTGACTAGTTAATTTCCCCT chr4A_47 CCAGCCGGAGAAGAACTTCATGAGCGGTACGTGACTAGTT---------- chr7D_1029 CCAGACGGCCAAGAACTACATGAGCGGTACGTC---ATTACTTGGTCCCT chr7A_1029 CCAGACGGCCAAGAACTACATGAGCGGTACGTTATTATTAGTTGCTCCAT chr4A_1141 CCAGACGGCCAAGAACTACATGAGCGGTAC------------------CT chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ------S---------------------------------SS-SSS---- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -----------------------------------------ATTTCCCCT reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CCATTCGGACGATTCGTTTTCAGATTCAAATTCCGTTTGTTTCTCTCTGG chr7D_1_TraesCS7D01G009700 CCATTCGGACGATTCGTTTTCAGATTCAAATTCCGTTTGTTTCTCTCTGG chr4A_47 --------------CGTTTTCAGATTCAAATTCCGTTTGTGTTTCTCTGG chr7D_1029 CCCTCCG------------------------TCCATTTATTTTTCTCTGC chr7A_1029 CCCTCCG------------------------TCCATTTATTTTTCTCTGC chr4A_1141 CCCTCCG------------------------TCCATTTATTTTTTCTGTG chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs --S-S--SSSSSSS----------------------------S------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 CCATTCGGACG--------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 C-----GTGGTTTGATCGACAAACTGATGTTGCTGCCTTTGCTTTCTGTT chr7D_1_TraesCS7D01G009700 C-----GTGGTTTGATCGACAAACTGATGTTGCTGCCTTTGCTTTCTGTT chr4A_47 C-----GTGGTTTGATCCACAAACTGATGTTGCTGTCTTTGCTTTCTGTT chr7D_1029 C-----TTGGTTTGATGGAGAAACTGACGTCCCTGCCTTTGCTCTCTGTT chr7A_1029 C-----GTGGTCTGATGGAGAGACTGACGTCCCTGCCTTTGCTCTCTGTT chr4A_1141 CCTTGGTTGGTTTGATGGAGAAACTGACGTCCCTGCCTTTGCTCTCTGTT chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TGCCGGCGG----------TGGCGGGCTACTCCGGCGA---CATGCAGAT chr7D_1_TraesCS7D01G009700 TGCCGGCGG----------TGGCGGGCTACTCCGGCGA---CATGCAGAT chr4A_47 TGCCGGCGG----------CGGCGGGCTACTCCGGCGA---CATGCAGAT chr7D_1029 TGCCGGCGGACGGCGACGGCGGCGGTCTTCTCCGGCGACATCATGCAGAT chr7A_1029 TGCCGGCGGACGGCGACGGTGGCGGTCTTCTCCGGCGGCATCATGCAGAT chr4A_1141 TGCCGGCGGACGGCGACGGCGGCGGGCTGCTCCGGCGACATCCTGCAGAT chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CCCAACGGTACGTTAGTGCACACTGACCAGAACGGAGATTCCATGTGGCA chr7D_1_TraesCS7D01G009700 CCCAACGGTACGTTAGTGCACACTGACCAGAACGGAGATTCCATGTGGCA chr4A_47 CCCAACGGTACGTTAGTGCTCACTGACTGAAACGGAGATTCCACGTGGCA chr7D_1029 CCCAACGGT-TAGTA----------------------------------- chr7A_1029 CCCAACGGT-TAGTA----------------------------------- chr4A_1141 CCCAACGGTATAGTA----------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------S-------SSS-------------S------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TATATGATTGATTGCAGCGGACCGCCGCTGCAGGCCTCCGTCCCCAATGC chr7D_1_TraesCS7D01G009700 TATATGATTGATTGCAGCGGACCGCCGCTGCAGGCCTCCGTCCCCAATGC chr4A_47 TATATGAAAGTTGGATAAAATATACTACTACA------------------ chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -----GACTGATTGCAGCCGAACGCCGCTGCAGGCCTCCGTCCCCAATGC chr6D_1576 -----GACTGAATGCAGCCGACCGCCGCTGCAGGCCTCCGTCCCCGATGC chr6B_1576 -----GACTGATTGCAGCCGACCGCCGCTGTAGGCCTCCGTCCCCAATGC chr5A_1576 -----GACTGATCGCAGCCAACCGCCGCTGCAGGCCTCCGTCCCCGATGC chr5D_1576 -----GACTGATTGCAGCGGACCGCCGCTGCAGGCCTCCGTCCCCAACGC chr3A_1576 -----GACTGATTGCAGCCGAGCGCCGCTGCAGCCCTCCGTCCCCAATGC chr5D_1579 --------TGATTGCAGCGGACCGCCGCTGCAGGCCTCCGTCCCCAATGC chr1A_1581 ----------ATCGCAGCCGAGCGCCGCTGCAGGCCTCCGTCCCCAATTC chr5B_1610 ---------------------------------------GTCCCCAATGC chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------S------------------------------------------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CGGCCATCC------ATCGCTAGCAAAATAATCAGCCTGCAGGTCGCCG- chr7D_1_TraesCS7D01G009700 CGGCCATCC------ATCGCTAGCAAAATAATCAGCCTGCAGGTCGCCG- chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 CGGTCATCC------ATCGCTAGCAAAATAATCAGTCTGCAGGTCGCCG- chr6D_1576 CGGCCATCCATCGCTATCGCTAGCAAAATAATCAGCCTGCAGGTCGCCG- chr6B_1576 CGGCCATCCATCGCTATCGCTAGCAAAATAATCAGCCTGCTGGTCGCCG- chr5A_1576 CGGCGATCC------ATCGCTAGCAAAATAATCAGCCAGCAGATCGCCG- chr5D_1576 CGGCCATCC------ATCGCTAGCAAGATAATCAGCCTGCAGGTCGCCGC chr3A_1576 CGGCCATCC------ATCGCTGGCAAAATAATCATCCTGCAGGTCGCCGC chr5D_1579 CGGCCATCC------ATCGCTAGCAAAATAATCAGCCTGCAGGTCGCCG- chr1A_1581 CGGCCATCC------ATCGCTAGCAAAATAATCAGCCTGCAGGTCGCCG- chr5B_1610 CGGCCATCC------ATCGCTTGCAAAATAATCATCCAGC----CGCCG- chr7B_1649 ----------------------------------GCCCGCAGGTCGCCG- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CCCCATGTTCTCGGCCATCCAGACGCTGCGTGCAGGCTGGC--------T chr7D_1_TraesCS7D01G009700 CCCCATGTTCTCGGCCATCCAGACGCTGCGTGCAGGCTGGC--------T chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 CCCCATGTTCTCGGCCATCCAGACGCTGCGTGCAGGCTGGC--------G chr6D_1576 CCCCATGTTCTGGGCCAACCAGACTCTCCGTGCAGGCTGGC--------G chr6B_1576 CCC-AGCGCATTGT-CAACCAGACGCTGCGTGCAGGCTGGC--------G chr5A_1576 CCCCACGTTCTCAGCCATCCAGACGCTGCGTGCAGGCTGGATAGGA---G chr5D_1576 CCCCATGTTCTCGGCCATCCAGACGCTGCGTGCAGGCTGGC--------T chr3A_1576 CCCCATGTTCTCGGATATCCAGACGCTGCGTGTAGGCTGGC--------A chr5D_1579 CCCCATGTTCTCGGCCATCCAGACGCTGCATGCAGGCTGGC--------T chr1A_1581 CCC-ATGTTCTCGGC-------ACGCTGCGTGCAGGCTAGC--------G chr5B_1610 CCCCATGTTCTTGGCCATCCAGACGCTGCGTGCAGGCTGGCAGCCTGGCA chr7B_1649 CCCCATGTTCTCGGCCATCCAGACGCTGCGTGCAGGCTGGC--------G chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CCC----------CCTCCATCCCAACACCGCATGCACTACTCCCAGCGCA chr7D_1_TraesCS7D01G009700 CCC----------CCTCCATCCCAACACCGCATGCACTACTCCCAGCGCA chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -CC----------CCTCCATCCCAACACCGCATGCACTCCTCCCAGCGCA chr6D_1576 -CC----------CCTCCATCCCAACACCGCATGCACTGCTCCCAGCGCA chr6B_1576 CCC-----------------------------------------AGCGCA chr5A_1576 -CG----------CCTCCATCCCAACACTGCATGCACTCCTCCCAGCGCA chr5D_1576 CCC----------CCTCCATCCCAACACCGCATGCACTACTCCCAGCGCA chr3A_1576 -CCCTTAGAAAGTCCTCCATCCCAACACCGCTTGCACTCCTCCCAGCGCA chr5D_1579 CCC----------CCTCCATCCCAACACCGCATGCACTACTCCCAGCGCA chr1A_1581 -CCCTTAGGAGCGCCTCCATCCCAACACCGCATGCATTCCTCCCAGCGCA chr5B_1610 -CCCTTTGAAAGTCCTCCATCCCAA-----------CTCCTCCCAGCGCA chr7B_1649 -CC----------CCTCCATCCCAACACCGCATGCACTCCTCCCAGCGCA chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 CCGTCATCAAAGCGCTGCCAAAAATCGCAGC--------CTACGCTGCCT chr5D_1576 -------------------------------------------------- chr3A_1576 TTGTCATCCCAACGCTGCCAAAAGTCAGAGC--------CTACGCTGCTT chr5D_1579 CTGTCATCCCAACGCTGCCAAAAATCACAGC--------CTACGCTGCTT chr1A_1581 CCGTCGTCCCAACGCTGCA------------------------------T chr5B_1610 CTGTCATCCCAACGCTGCCAAAAGTCAGAGCCTAGGCTGCT--------T chr7B_1649 CTATCATCCCAACGCTGCCAAAAATCACAGC--------CT--------T chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------CTGTCATCCCAAC chr7D_1_TraesCS7D01G009700 -------------------------------------CTGTCATCCCAAC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------CTGTCACCCCAAC chr6D_1576 -------------------------------------TTGT-----CAAC chr6B_1576 -------------------------------------TTGT-----CAAC chr5A_1576 ACATGCCGCCGGCGGCGAAAGGAACTAACTTAATGAAC------------ chr5D_1576 -------------------------------------C------------ chr3A_1576 GCATGTCGCCGGCGGCGGCAGGAATTTACTTAATTAGC------------ chr5D_1579 GCAGGCCACCGGCGGCTGCAGGAACTAACTTAATTAGC------------ chr1A_1581 GCATGCCGCCGGCGGCGGCAGGAACTAACTAAATTAGC------------ chr5B_1610 GCATGCCGCCGGCGGCGGCAGGAATTTAGTTAATTAGC------------ chr7B_1649 GCAGGCCGGCGGCGGCGGCAGGAACTAACTTAATTAGC------------ chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------S------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------TCCCAAC forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GCTGCCAAAAATCACAGCCTACGCTGCTTGCAGGCCGCCGGCGGCTGCAG chr7D_1_TraesCS7D01G009700 GCTGCCAAAAATCACAGCCTACGCTGCTTGCAGGCCGCCGGCGGCTGCAG chr4A_47 -------------------------------------------------- chr7D_1029 --------------------------------------------CTCCAC chr7A_1029 --------------------------------------------CTCTGC chr4A_1141 --------------------------------------------CTCCAC chr7D_1576 GCTGCCAAAAATCACAGCCT--------TGCAGGCCGGCGGCGGCGGCAG chr6D_1576 GCTGCCAAAAGTCACAGCCT--------TGCAGGCCGCCGGCGGCGGCAG chr6B_1576 GATGCCAAAAATCCCAGCCT--------TGCACGCCGCCGGCGGCGGCAG chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs --------------------SSSSSSSS---------------------- forward_485 -------------------------------------------------- reverse_4094 GCTGCCAAAAATC------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GAACTAACTTAATTAGCTAGC-------TTTTA---TTT----------- chr7D_1_TraesCS7D01G009700 GAACTAACTTAATTAGCTAGC-------TTTTA---TTT----------- chr4A_47 -------------------------------------------------- chr7D_1029 GCACTAAC-----TAATAAAG-------TCTTC---TGTGTGGGGAAAAA chr7A_1029 GCACTAAC-----TAATTATG-------TCTTT---TGTGGGGGGGAAAG chr4A_1141 GCACTAACTTTTTTAATAAGG-------TCTTC---TGTGTGGGGAAAAA chr7D_1576 GAACTAACTTAATTAGCTAGC--------TTTTCTTTTT----------- chr6D_1576 GAACTAACTTAATTAGCTAGC--------TTTT---TTT----------- chr6B_1576 GAACTAACTTAATTAGCTAGTATTCTTTTTTTT---TTT----------- chr5A_1576 -----------------TAGC-------TTTTT---TTT----------- chr5D_1576 -----------------TAGC-------TTTTA---TTT----------- chr3A_1576 -----------------TAGC-------TTCTT---TTT----------- chr5D_1579 -----------------TAGC-------TTTTA---TTT----------- chr1A_1581 -----------------TAGC-------TATAT---TTT----------- chr5B_1610 -----------------TAGCTTTTG--TTTTT---ATT----------- chr7B_1649 -----------------TAGT-----TTTTTTT---TTT----------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 -------------------------------------------------- chr7D_1029 AGACGGGA-TCTCTCTCTAGACATAATCAAA----ATTGCTTAACTCGCA chr7A_1029 --ACGGGA-TCTCTCTCTAGGCATAATCAAA----ATTGCTTAACTCACA chr4A_1141 GACGGGATCTCTCTCTCTAGACATAATCAAAAGGGATTGTTTAACTCACA chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 -------------------------------------------------- chr7D_1029 CCAAATTTGGAGGAAAAATTTCGCAGCAAAACAGGGGAAAACAGAGTTTC chr7A_1029 CCAAATTTGGAGGAAATTTTTCGCAGCAAAACAGGGGAAAACAGAGTTTC chr4A_1141 CCAAATTTGGAGGAAAACTTTGACAGCAAAACAGGGGAAAACAGAGTTTC chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 ----------------------------TGGAAAAGAATGCACATGGCAT chr7D_1_TraesCS7D01G009700 ----------------------------TGGAAAAGAATGCACATGGCAT chr4A_47 -------------------------------------------------T chr7D_1029 CATAGGGGGTTGGGGGTTGACTCCACAGTGGCGTAGATTGGATACATTAT chr7A_1029 CATAGTGAG------------TTCACAGGGGCGTAGATTGGATACATTGT chr4A_1141 CATAGCGGGTTGGGGGTTCACTTCACAGTGGCGTAGATTGGATACATTGT chr7D_1576 ----------------------------TGGAAAAGAATGCACATGGCAT chr6D_1576 ----------------------------TGGAAAAGAATGCACATGGCAT chr6B_1576 ----------------------------TGGAAAATAATGCACATGGCAT chr5A_1576 ----------------------------TGGAAAAGAATGCGCATGGCAT chr5D_1576 ----------------------------TGGAAAAGAATGCACATGGCAT chr3A_1576 ----------------------------TGGAAAAGAATGGACATGGCGT chr5D_1579 ----------------------------TGGAAAAGAATGCACATGGCAT chr1A_1581 ----------------------------TGGAAAAGAATGCACATAGCAT chr5B_1610 ----------------------------TTGAAAAGAATGGACATGGCGT chr7B_1649 ----------------------------TAGAAAAGAATGCACATGGCAT chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GATGT-AAAGAAGAGAGCTCGATGGAGTTGAATATTTACCATGATA---- chr7D_1_TraesCS7D01G009700 GATGT-AAAGAAGAGAGCTCGATGGAGTTGAATATTTACCATGATA---- chr4A_47 GAGTA-GAAGAACACA------------------------ATAACG---- chr7D_1029 GATTA-GAAG---TAACGTT-------------------CATAATG---- chr7A_1029 GAGTA-GAAGAAGTGACGTG-------------------CCTAGTG---- chr4A_1141 GAGTA-GAAGAAGTAACGTG-------------------CATAGTG---- chr7D_1576 GATGTCAAAGAAGAGAGCTCGATGGAGTTGAATACTTACCATGATA---- chr6D_1576 GATGT-CAAGAAGAGAGCTCCATGGAGTTGACTACTTACTATGATACTA- chr6B_1576 GATGT-CAAGAAGAGAGCTCGATGGAGTTGAATACTTGCCATGATACTAT chr5A_1576 GATGT-CAAGAAGAGAGTTCGATGGAGTTGAATACTTACCATGATA---- chr5D_1576 GATGT-AAAGAAGAGAGCTCGATGGAGTTGAATATTTACCATGATA---- chr3A_1576 GATGT-CAATAAGAGAGTTCGATGGAGTTGAATACTTACCATGGTA---- chr5D_1579 GATGT-AAAGAAGAGAGCTCGATGGAGTTGAATATTTACCATGATA---- chr1A_1581 GATGT-CAAGAAGTGAGTTCGATGGAGTTGAATACTTCCCATTATA---- chr5B_1610 GATGT-CAATAATAGAGTTCGATGGAGTTGAATACTTACCATAGTA---- chr7B_1649 GATGT-CAAGAAGAGAGCTCGATGGAGTTGAATACTTACCATGATA---- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 --TGG-CCTCGTATTC---------------------------------- chr7D_1_TraesCS7D01G009700 --TGG-CCTCGTATTC---------------------------------- chr4A_47 --TGG-TCTTCCTTCCCAAAATACGATACAAAATTATAAGGCATAT---- chr7D_1029 --TGGTCCCCCCTTCCCAAAATGCAAAGCATATGAATTTTGTCCTTAGTT chr7A_1029 --TGG-CCCCCCTTCCCAAAATGCAAAGCGTATAAGTTTTGTCCGTACTT chr4A_1141 --TGG-CCCCCCTTCCCAAAATGCAAATCATGTCCATTTTGTCCTTAGTT chr7D_1576 --TGG-CCTCGTATTC---------------------------------- chr6D_1576 ----------GTATTC---------------------------------- chr6B_1576 TATGG-CCTGGTATTC---------------------------------- chr5A_1576 --TGG-CCTCGTATTC---------------------------------- chr5D_1576 --TGG-CCTCGTATTC---------------------------------- chr3A_1576 --TGG-CCTCGTATTC---------------------------------- chr5D_1579 --TGG-CCTCGTATTC---------------------------------- chr1A_1581 --TGG-CCTCGTATTC---------------------------------- chr5B_1610 --TGG-CCTCGTATTC---------------------------------- chr7B_1649 --TGG-CCTCGTATTC---------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 -------------------------------------------------- chr7D_1029 AGCCTTTGTTAAGTTTATAAAAATTC-AACATCTAAGATACCAA------ chr7A_1029 AAGCTTCTCTTGTTATTATGTTTATATAAAATCTAAGATACCAA------ chr4A_1141 AACCTTTGTTAAGTTCATAAAAAACC-AACATCTAAGATACCAAACCAAT chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 ---------TAGTG------------------------------------ chr7D_1_TraesCS7D01G009700 ---------TAGTG------------------------------------ chr4A_47 -------------------------------------------------- chr7D_1029 -ACAAATATTTATG------------------------------------ chr7A_1029 -TCAG-TATTAGTG------------------------------------ chr4A_1141 ATCAA-TATCAATG------------------------------------ chr7D_1576 ---------TAGTT------------------------------------ chr6D_1576 ---------TAGTT------------------------------------ chr6B_1576 ---------TAGTT------------------------------------ chr5A_1576 ---------TAGTG------------------------------------ chr5D_1576 ---------TAGTG------------------------------------ chr3A_1576 ---------TAGTGTCTTTCTAGTGTCTGCATGGTCATTCATTTCTTTTT chr5D_1579 ---------TAGTG------------------------------------ chr1A_1581 ---------TAGTG------------------------------------ chr5B_1610 ---------TAGTG------------------------------------ chr7B_1649 ---------TAGTT------------------------------------ chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------TCTGCAT chr7D_1_TraesCS7D01G009700 -------------------------------------------TCTGCAT chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------TTCCCAT chr7A_1029 -------------------------------------------TGTCCAT chr4A_1141 -------------------------------------------TGTCCAT chr7D_1576 -------------------------------------------TCTGCAT chr6D_1576 -------------------------------------------TCTGCAT chr6B_1576 -------------------------------------------TCTGCAT chr5A_1576 -------------------------------------------CCTGCAA chr5D_1576 -------------------------------------------TCTGCAT chr3A_1576 TGAAAAGAAGGGTTACCTGGCCTCTGCATCCGAAAGATGTATGTCTGCAT chr5D_1579 -------------------------------------------TCTGCAT chr1A_1581 -------------------------------------------TCTGCAA chr5B_1610 -------------------------------------------TCTGCAT chr7B_1649 -------------------------------------------TCTGCAT chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GGTCATTCATGGGACGGGCTGGACAAGGTCGGGGTCATGCGGCCCAAGCG chr7D_1_TraesCS7D01G009700 GGTCATTCATGGGACGGGCTGGACAAGGTCGGGGTCATGCGGCCCAAGCG chr4A_47 -------------------------------------------------- chr7D_1029 TGTGAAATATCTTACAGTAAACTTACTAT-CATGCATACTTTGTAGATG- chr7A_1029 TGTGAAATATCTTGCAGTAAATTTGCTAG-CATGCATACTTTTTAGATGT chr4A_1141 TGTGAAATATCTTATAGAGAACTTAACAACCATGCATATTTTTTAGATGT chr7D_1576 GGTCATTCATGGAACGGGCTGGACAAGGTCGGGGTCATGCGGCCCAAGCG chr6D_1576 GGTCATTCATGGGACGGGCTGGGCAAGGTCGGGGTCATGCGGCCCAAGCG chr6B_1576 GC-CATTCATGGGACGGGCTGGACAAGGTCGGGGTCATGCGGCCCAAGCG chr5A_1576 GGTCCTTCATGGGACGGGCTGGACAAGCTCGGGGCCATGCGGCCCGAGCG chr5D_1576 GGTCATTCATGAGACGGGCTGGACAAGGTCGGGGTCATGCGGCCCAAGCG chr3A_1576 GATTATTCATGGAACGGGCTGGACAAGGCCGGGGCCATGCAGTCCAAGCA chr5D_1579 GGTCATTCATGGGACGGGCTGGACAAGGTCAGGGTCATGCGGCCCAAGCC chr1A_1581 GGTCATTCATGGGACGGGCTGGACATGGTCTGGGGCATGCGGCCCTAGCG chr5B_1610 GGTCATTCATGGGACGGGCTGGACAAGGCCGGGGCCATGCGGTCCAAGCA chr7B_1649 GGTCATTCACGGGACGGGCTGGACAAGGTCGGGGTCATGCGGCCCAAGCG chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 AAGGCTGTCGTCTATA---------------------------------- chr7D_1_TraesCS7D01G009700 AAGGCTGTCGTCTATA---------------------------------- chr4A_47 -------------------------------------------------- chr7D_1029 -CACGTTTTATACTTTAGTAAGAAG---GGAGTAAGAAACACAATGAAGC chr7A_1029 ACACGCTTTATATTTTATTAGTAAGGTGGGAGTAAGACACACAATGAAGC chr4A_1141 GCACGGTTTTATATTTTAA-------------TATGATACACAATGAAGC chr7D_1576 AAGGCTGTCGTCTTTA---------------------------------- chr6D_1576 AAGGCTGTCATCTCTA---------------------------------- chr6B_1576 AAGGCTGTCATCTTTA---------------------------------- chr5A_1576 ATGGCTGTCGTCTCTA---------------------------------- chr5D_1576 AAGGCTGTCGTCTATA---------------------------------- chr3A_1576 AAGTCTGTCATCTCTA---------------------------------- chr5D_1579 AAGGCTGTCGTCTATA---------------------------------- chr1A_1581 ACGGCTGTCGTCTCTA---------------------------------- chr5B_1610 AAGTCTGTCATCTCTA---------------------------------- chr7B_1649 AAGGCTGTCATCTTTA---------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------TGTCA-----GCG------------------------ chr7D_1_TraesCS7D01G009700 -------------TGTCA-----GCG------------------------ chr4A_47 ----------------------------------ATATTCTCAAAATCTC chr7D_1029 TCGAGAG-TGATGTGTCATGTCCCTGCCACTAGAAAAGTAGCAAGCTTAG chr7A_1029 TCGAGAG-TGATGTGTCATACCCCAACCACTAGGAAAATAACAAGGTGAA chr4A_1141 TCGAGAGGTGATGTGTCATTCCCCTGCCACTAGAAAAGTAACAAGGCTAA chr7D_1576 -------------TGTCA-----GCG------------------------ chr6D_1576 -------------TGTCA-----GCG------------------------ chr6B_1576 -------------TGTCA-----GCG------------------------ chr5A_1576 -------------TGTCA-----GCG------------------------ chr5D_1576 -------------TGTCA-----GCG------------------------ chr3A_1576 -------------TGTCA-----GCG------------------------ chr5D_1579 -------------TGTCA-----GCG------------------------ chr1A_1581 -------------TGTCA-----GCG------------------------ chr5B_1610 -------------TGTCATGTCAGCG------------------------ chr7B_1649 -------------TGTCA-----GCGACCAGTTCATATTCTCAAAAAAAA chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 ----------ACCAGTTTCAG-------------------ATCCCGGAGG chr7D_1_TraesCS7D01G009700 ----------ACCAGTTTCAG-------------------ATCCCGGAGG chr4A_47 AAAAAT-------------------------------------------- chr7D_1029 GATTACATTTGGCCAATACAGATGTGATGTGACATGCCCCATCCAACGCT chr7A_1029 AAATATATCTGACCAATACAGACACTCTCG---AGGCGCCATCCAAGAGT chr4A_1141 GATTACATCTGGCCAATACAGATGTGATGTAACATGCCCCATCCAACGCT chr7D_1576 ----------ACCAGTTCCAG-------------------ATCCCGGAGG chr6D_1576 ----------ACCAGTTCCAG-------------------ATCCCGGAGG chr6B_1576 ----------ACCGGTTCTAG-------------------ATCCCGGAGG chr5A_1576 ----------ACCAGTTCCAG-------------------ATCTAGGAGG chr5D_1576 ----------ACCAGTTTCAG-------------------ATCCCGGAGG chr3A_1576 ----------ACCAGTTCCAG-------------------ATCCCGGAGG chr5D_1579 ----------ACCAGTTTCAG-------------------ATACCGGAGG chr1A_1581 ----------ACCAGTTCCAG-------------------ATCCCGGAGG chr5B_1610 ----------ACCAGTTGTAG-------------------ATCCCGGAGG chr7B_1649 AAAGTCAGCGACCAGTTCCAG-------------------ATCCCGGAGG chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CTTGATGAGAAGACC----------------------------------- chr7D_1_TraesCS7D01G009700 CTTGATGAGAAGACC----------------------------------- chr4A_47 -------------------------------------------------- chr7D_1029 CTAGATGTAGTTTCTTTCTCAACCAAACAGAAAAAACAAACATGTAAACA chr7A_1029 CTAGGTGCAAACATA----------------------------------- chr4A_1141 CTAGATGCAGTTTCTTTCTCAACCAAACAGAGAGAACAAACATGTAAACA chr7D_1576 CTTGACGAGAAGACC----------------------------------- chr6D_1576 CTTGACGAGAAGACC----------------------------------- chr6B_1576 CTTGATGAGAAGACC----------------------------------- chr5A_1576 CTCGAGGGGAACACC----------------------------------- chr5D_1576 CTTGACGAGAAGACC----------------------------------- chr3A_1576 CTCGACCAGAAAACC----------------------------------- chr5D_1579 CTTGACAAGAAGACC----------------------------------- chr1A_1581 CTCGACGGGAACACC----------------------------------- chr5B_1610 CTCGACCAGAAAACC----------------------------------- chr7B_1649 CTTGACGAGAAGACC----------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -AAAAA-TCGAGTAATCTA-GCCGCGGACGACAGCC--------GGCAA- chr7D_1_TraesCS7D01G009700 -AAAAA-TCGAGTAATCTA-GCCGCGGACGACAGCC--------GGCAA- chr4A_47 -------------------------------------------------- chr7D_1029 CAAAAA-T------------------------------------------ chr7A_1029 -AAAAA-T------------------------------------------ chr4A_1141 C-AAAG-T------------------------------------------ chr7D_1576 -AAAAC-CCGGGTAATCTAAGCCGCGGACGACAGCC--------GGCAAG chr6D_1576 -AAAAC-CCGGGTAATCTA-GCCGTGGACGACAGCC--------GGCAAG chr6B_1576 -AAAAA-CCGGGTAATCTA-GCCGTGGACGACAGCC--------GGCAAG chr5A_1576 -A-AAAACCGGATAATTTA-GCCGCAGACGACGGCC--------GGCAAG chr5D_1576 -AAAAA-TCGGGTAATCTA-GCCACGGACGACAGCC--------GGCAA- chr3A_1576 -AAAAA-CCGGGCAATCTA-GCCGCGGACGATGACGGCCAGCAAGGCGAG chr5D_1579 -AAAAA-TCGGGTAATCTA-TCCGCGGACGACAGAC--------GGCAA- chr1A_1581 -AAAAC-CAGGGTAATCTA-GCTGCCGACGACGGCC--------GGCAAG chr5B_1610 -AAAAA-CCAGGCAATCTA-GCCGCGGACGACGGCC--------AGCAAG chr7B_1649 -AAAAAACCGGCTAATCTA-GCCGCGGACGACAGCC--------GGCAAG chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ----------S--------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 ----------AGTAATCTAGCCGCGGACGA-------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GCGAG-----GAAGAGGGCATGCGGCCGGGGCGGCACACTCGCCTTCGTC chr7D_1_TraesCS7D01G009700 GCGAG-----GAAGAGGGCATGCGGCCGGGGCGGCACACTCGCCTTCGTC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 GCGAG-----GAAGAGGGCATGCGGCCGGGGCGACGCACTCGCCTTCCTC chr6D_1576 GCGAG-----GAAGAGGGCATGCGGCCGGGGCGACGCACTCGCCTTCGTC chr6B_1576 GCGAG-----GAAGAGGGCATGCGGCCGGGGCGGTGCACTCGCCTTTGTC chr5A_1576 GCCAG-----GAAGAGGGCATGCGGCCTGAGCGACGCACTCGCCTTCGTT chr5D_1576 GCGAG-----GAAGAGGGCATGCGGCCGGGGCGGCGCACTCGCCTTCGTC chr3A_1576 GCGAT-----GAAGAGGGCATGCGGCCGGGGCGCC--------------- chr5D_1579 GCGAG-----GAAGAGGGCATGCGGCCGGGGCGGCGCACTCGCCTTCGTC chr1A_1581 GCCAG-----GAAGAGGGCATGCGGCCGGGCCGACGCACTCGTCTCCA-- chr5B_1610 GCGAGGCGATGAAGAGGGCATGCGGCCGGGGCGACGCACTCGCCTTCGTC chr7B_1649 GCGAG-----GAAGAGGGCATGCGGCCGGGGCGACGCACTCACCTTGGTC chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -----------------------------------S-------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 --------GTCTTCGTCAG-------GTGACCCACTCAAAATCCTGTAGG chr7D_1_TraesCS7D01G009700 --------GTCTTCGTCAG-------GTGACCCACTCAAAATCCTGTAGG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 CGTTCGTCGTCTTCGTCGGGTGATCCGTGACCCACTCAAAATCCTGTAGG chr6D_1576 CGTTCGTCGTCTTCGTCGGGTGACCCGTGACCCACTGAAAATCCTGTAGG chr6B_1576 CGCTCGTCGTCTTCGTCGGGTGACCTGTGACCCACTCAAAATCCTGTAGG chr5A_1576 --------GTCTCCGTCTG-------GTGACCCGCTTCAAATTCTGTAGG chr5D_1576 --------GTCTTCGTCAG-------GTGACCCACTCAAAATCCTGTAGG chr3A_1576 --TTCGTCGTCTTCGTCAG-------GTGACCCACTCTAAATCATGTAGG chr5D_1579 --------GTCTTCGTCAG-------GTGACCCACTCAAAATCCTGTAGG chr1A_1581 ---------TCTTCATCGG-------GTGACCCGCTCCAAATTCTGTAGG chr5B_1610 --------GTCTTCGTTAG-------GTGTCCCACTCAAAATCATGTAGG chr7B_1649 CGTTCGTCGTCTTCGTCG-GTGTCCCGTGACCCACTCAAAATCCTGTAGG chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TTCGAGGGTAACAC--AAAGGCATGACAACTCGCCGCTGCCGACGGC--T chr7D_1_TraesCS7D01G009700 TTCGAGGGTAACAC--AAAGGCATGACAACTCGCCGCTGCCGACGGC--T chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 TTCGAGGGTAACAC--AAAGGCATGACAACTCGCCGCTGCCGACGGC--T chr6D_1576 TTCGAGGGCAACAC--AAAGGCATGGCAACTCGCCGCTGCCGACGGCGCT chr6B_1576 TTCGAGGGTAACACT--------------------------GACGGC--T chr5A_1576 TTCAAGGGTAACAC-AAAAGGCATGACAACTCGCCGCTGCCGACGGC--T chr5D_1576 TTCGAGGGTAGCAC--AAAGGCATGACAACTCGCCGCTGCCGACGGC--T chr3A_1576 TTCGAGGGTAACACGA-AAGGCATGATAACTCGCCGCTGCCGACGGC--T chr5D_1579 TTCGAGGGTAACAC-A-AAGGCATGACAACTCGCCGCTGCCGACGGC--T chr1A_1581 TTCGAGGGTAACACGA-AAGACATGAAAAATCGCCGCTGCCGACGGC--T chr5B_1610 TTCGAGGGTAACACGA-AAGGCATGACAACTCGCTGCTGCCGACGG---- chr7B_1649 TTCGAGGGTAACAC-A-AAGGCATGACAACTCGCCGCTGCCGACGGC--T chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 AGCTATGACGCGACGAGCGATGGCGACGGTGCGGGCTGGCAATGGCGATG chr7D_1_TraesCS7D01G009700 AGCTATGACGCGACGAGCGATGGCGACGGTGCGGGCTGGCAATGGCGATG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 AGCTAGGACGCGACGAGCGATGGCGACGGTGCGGGCTGGCAATGGCGATG chr6D_1576 AGCTAGGACGCGACGAGCGATGGCGACGGTGCGGGCTGGCAATGGCGATG chr6B_1576 AGCTAGGACGCGACGAGCGATGACGACGGTGCGGGCTGGCAATGGCGATG chr5A_1576 AGCTATGACACGACGAGCGATAGCGACGGTGCGGGCTGGCAATGGCGATC chr5D_1576 AGCTATGACGCGACGAGCGATGGCGACGGTGCGGGCTGGCAATGGCGATG chr3A_1576 AGCTAGGACGCGACGAGCGATGGCAACGGTGCGGGCTGGCAATGGCGATG chr5D_1579 AGCTATGACGCGACGAGCGATGGCGACGGTGCGGGCTGGCAATGGCGATG chr1A_1581 AGCTAGGACGCGACGAGCGATGGCGATGGTGCG----------------- chr5B_1610 -------------------------------------------------- chr7B_1649 AGCTAGGACGTGACGAGCGATGGCGACGGTGCGGGCTGGCAATGGCGATG chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GCAAATGAACGAGTGTGGGATGGAGAATTACTGCCTGA------GATTTC chr7D_1_TraesCS7D01G009700 GCAAATGAACGAGTGTGGGATGGAGAATTACTGCCTGA------GATTTC chr4A_47 -------------------------------------------------- chr7D_1029 --AATTATGCAAGTGTGGGATGAAACA-GGCAAGATAATTGAC------- chr7A_1029 --AATTAAGCAAGTGTGGGGTGAAACTGGGCGAGAGAATTAGT------- chr4A_1141 --AATTAAGCAAGTGTGGGATGAAACATGACAAGATAGTTGAT------- chr7D_1576 GCAAATGAACGAGTGTGGGATGGAGAATTACTGCGTGA------GATTTC chr6D_1576 GAAAATGGACGAGTGTGGGATGGAGAATTACTGCGTGA------GATTTC chr6B_1576 GCAAATGAACGAGTGTGGGATGGAGAATTACTGCATGA------GATTTC chr5A_1576 GCAAATGAACGAGTATGGGATGGAGAATTACTGCGCGA------AATTTC chr5D_1576 GCAAATGAACGAGTGTGGGATGGAGAATTACTGCCTGA------GATTTC chr3A_1576 GCAAATGAACGAGTGTGGGATGGATAATTACCGCGTGAGATTTCGATTTC chr5D_1579 GCAAATGAACGAGTGTGGGATGGAGAATTACTGCCTGA------GATTTC chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 GCAAATGA--GAGTGTGGGACGGAGAATTACTGCGTGA------GATTTC chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 AGGGGAAGGTGC---CTGCGGGATGGATACATTTGAACTACCCAAAACGC chr7D_1_TraesCS7D01G009700 AGGGGAAGGTGC---CTGCGGGATGGATACATTTGAACTACCCAAAACGC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 AGGGGAAGGTAC---CTGCGGGATAGATACATGTGAACTACCCAAAACGC chr6D_1576 AGGGGAAGGTAC---CTGCGGGATGGATACATGTGAACTACCCAAAACGC chr6B_1576 AGGGGAAGGTAT---ATGCGGGATGGATACATGTGAACTACCCAAAACGC chr5A_1576 AGGGGAAGGTGC---CCATGGGATGGATACATTTGAACTACCCAAAACGC chr5D_1576 AGGGGAAGGTGC---CTGCGGGATGGATACATTTGAACTACCCAAAACGC chr3A_1576 AGGGGAAGGTGC---CTGTGGGATGGATACATGTGGACTACCCAAAACGC chr5D_1579 AGGGGAAGGTGC---CTGCGGGATGGATACATTTGAACTACCCAAGACGC chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 AGTCGAAGGTACCAGCTGCGGGATGGATACATGTGAACTACCCAAA---- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CCTTAATTACTTAATATACTACTGAAAATCTTGTGTAGTATCTGCTCATC chr7D_1_TraesCS7D01G009700 CCTTAATTACTTAATATACTACTGAAAATCTTGTGTAGTATCTGCTCATC chr4A_47 -------------------------------------------------- chr7D_1029 ----------------------------------------TTGGCCCATC chr7A_1029 ----------------------------------------TTGGCCAATC chr4A_1141 ----------------------------------------TTAGCCCG-- chr7D_1576 CCTTAATTACTTAACATACTACCGAAAATCTAGTGTAGTATTGGCTCATC chr6D_1576 CCTTAATTACTGCC-------------------TGTAGTATTGGCTCATC chr6B_1576 CCTTAATTACTTAACATACTACCGAAAATCAGA-----------CTCAAC chr5A_1576 CCTTGATTACTTAATATACTACCGAAAATCTAGTGTAGTAT--------- chr5D_1576 CCTTAATTACTTAATATACCACCAAAAATCTAGTGTAGTATCTGCTCATC chr3A_1576 CCTTAATTACTTAATATATTACCGAAAATCTAGTGTAGTATTGGCTCATA chr5D_1579 CCTTAATTACTTAATATACTACCGAAAATCTAGTGTAGTATCTGCTCATC chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ----------------------S--------S------------------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TGGGCCGTTGAACAAAAAAAATTAACGGTCCAAATTAATCTGATGTACCG chr7D_1_TraesCS7D01G009700 TGGGCCGTTGAACAAAAAAAATTAACGGTCCAAATTAATCTGATGTACCG chr4A_47 -------------------------------------------------- chr7D_1029 TGATCTGATTAACAAAAC-------------------------------- chr7A_1029 TGATCTGATTAACTAAAC-------------------------------- chr4A_1141 ---TCTGATTAACTAAAC-------------------------------- chr7D_1576 TGGGCCGTTGAACTAAAGAAATAAACGGTCTAAGTTAATCTGATGTACCA chr6D_1576 TGGGCCGTTGAACTAAAGAAATAAACGGTCAAAATTAATCTGATGTACCG chr6B_1576 TGGGCCGTGAGATTTCAGGGG----------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 TAGGCCGTTGAACAAAAAAAATTAACGCTCCAAATTAATCTGATGTA--- chr3A_1576 TGGGCCGTTGAACTAAGGAAATAAACAGTCTAAATTAATCTGATGTAACG chr5D_1579 TGGGCCGTTGAACAAAAAAAATTAATGGTCCAAATTAATCTGATGTACCG chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TAAAAGGTCCCATATTATAAGACATATATTTTTTTTTG----TCCTAACT chr7D_1_TraesCS7D01G009700 TAAAAGGTCCCATATTATAAGACATATATTTTTTTTTG----TCCTAACT chr4A_47 -----------ATATTATAAGGCATATTTTTTGTGTCCTAACTCCTAACT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 TAAAAGGTC----------------------------------------- chr6D_1576 TAAA---------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 TAAAACGTC----------------------------------------- chr5D_1579 TAAAAGGTCCCTTTTTATA------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ---------------------S-----S----S-S-SS------------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CACTTTGTTAAGTTTAACTATGTTTTAAAAAATTCAACAACGCTGCAGTA chr7D_1_TraesCS7D01G009700 CACTTTGTTAAGTTTAACTATGTTTTAAAAAATTCAACAACGCTGCAGTA chr4A_47 CACTTTGTTAAGTTTAACCATGTTTAAAAAAACTCAACAGCGCTGCAGTA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ------------------S------S------S------S---------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------CAACGCTGCAGTA reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CCAAGTGAGTATATCAGTGGATCCAGCGCGAAATATGATTTTATTG-AAA chr7D_1_TraesCS7D01G009700 CCAAGTGAGTATATCAGTGGATCCAGCGCGAAATATGATTTTATTG-AAA chr4A_47 CCAAGTCAGTATATCAGTGGATCCAGTGCGAATAATGATTTTATTGAAAA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ------S-------------------S-----SS---------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 CCAAGTG------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CTTATACGCCCTGTATTTTTGTAAGCTAACAAGGTTGAAATTATTTGACC chr7D_1_TraesCS7D01G009700 CTTATACGCCCTGTATTTTTGTAAGCTAACAAGGTTGAAATTATTTGACC chr4A_47 CTTATATGCCCTGTATTTTTAAACA--AACAGGGCTGAAATTATTTGACC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ------S-------------SS-SSSS----S--S--------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GATACACATATTTTTGGAACCTCACCCAAAGGAATGGAGGAATTTTCTTT chr7D_1_TraesCS7D01G009700 GATACACATATTTTTGGAACCTCACCCAAAGGAATGGAGGAATTTTCTTT chr4A_47 AATACATATGTTTTCTGAACCTCACCCAAAGGAATGGATGAAATTTCTTC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs S-----S--S----SS----------------------S---S------S forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CGAAATGAAAGCTGAAACCATGCATTTTTATAGCTACCCAAAGAAACATA chr7D_1_TraesCS7D01G009700 CGAAATGAAAGCTGAAACCATGCATTTTTATAGCTACCCAAAGAAACATA chr4A_47 CGAATTGAAAGCCGAAACCATGCATTTTTATAGCTACCCAAAGAAACATA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ----S-------S------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TGTGAAAAGTGAGTTGGTGATCTAAACATGAGGCC-TCAAGAAGGGCAAG chr7D_1_TraesCS7D01G009700 TGTGAAAAGTGAGTTGGTGATCTAAACATGAGGCC-TCAAGAAGGGCAAG chr4A_47 TGTGAAAATTGAGTTGGTGATCTAAACATGAGGTGGTCAAGGAGGGCAAC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs --------S------------------------SS------S-------S forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 ---------------------------------CCTCAAGAAGGGCAAGG forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GAGGACTGATTTGATTGATCTGATTAAGCACTCATTGCAGGTTTGGTATA chr7D_1_TraesCS7D01G009700 GAGGACTGATTTGATTGATCTGATTAAGCACTCATTGCAGGTTTGGTATA chr4A_47 AAGGACTGATTTGATTGATCTGATTAAGCACTCATTGCAGGTCTGGTATA chr7D_1029 --------------------------------CATTGCAGGTCTGATGTA chr7A_1029 --------------------------------CGTTGCAGGTCTTATGTA chr4A_1141 --------------------------------CATTGCAGGTCTGATGTA chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 ------------------------------------------------TA chr7D_2837 ------------------------------------------------TA chr4A_2837 ------------------------------------------------TA chr7A_2837 ------------------------------------------------TA chr7A_2837 ------------------------------------------------TA chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs S-----------------------------------------S------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 AGG----------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CTACCGTGGATGGTACCACATGTTCTACCAGTACAACCCGAAGGGTATTG chr7D_1_TraesCS7D01G009700 CTACCGTGGATGGTACCACATGTTCTACCAGTACAACCCGAAGGGTATTG chr4A_47 CTACCGTGGATGGTACCACCTGTTCTACCAGTACAACCCGAAGGGCATCG chr7D_1029 CTACCGCGGATGGTACCACATGTTCTTCCAGTACAACCCGGTGGGCACCG chr7A_1029 CTACAATGGATGGTACCACATGTTCTTCCAGTACAACCCGGTGGGCACCG chr4A_1141 CTACCGTGGATGGTACCACATGTTCTTCCAGTACAACCCGGTGGGCACCG chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 CTACCGTGGATGGTACCACTTCTTTTACCAGTACAACCCGGAGGGTGTCA chr7D_2837 CTACCGTGGATGGTACCACTTCTTCTACCAGTACAACCCGGAGGGCGTCA chr4A_2837 CTACCGTGGATGGTACCACTTCTTCTACCAGTACAACCCAGAGGGCATCA chr7A_2837 CTACCGTGGATGGTACCACTTCTTCTACCAGTACAACCCGAAGGGCGTCA chr7A_2837 CTACCGTGGATGGTACCACTTCTTTTACCAGTACAACCCGGAGGGTGTCA chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ------------------------------------------------S- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CTTGGGCCTTTGGCATTTTGTGGGGCCATGCCGCGTCCCGAGACATCGTC chr7D_1_TraesCS7D01G009700 CTTGGGCCTTTGGCATTTTGTGGGGCCATGCCGCGTCCCGAGACATCGTC chr4A_47 CCTGGGCCTTTGGCATTTTGTGGGGCCATGCCGCGTCCCGAGACCTCGTC chr7D_1029 ATTGGGACGACGGCATGGAGTGGGGCCACGCCGTCTCTCGGAACCTTGTC chr7A_1029 ATTGGGACGACGGCATGGAGTGGGGCCATGCCGTGTCTCGGAACCTTGTC chr4A_1141 ACTGGGACGACGGCATGGAGTGGGGCCACGCCGTGTCCCGGAACCTCGTC chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 CGTGGGGAAACATCTC---GTGGGGCCACGCCGTGTCGCGAGACATGGTC chr7D_2837 CGTGGGGCAACATCTC---GTGGGGGCACGCCGTGTCGCGGGACATGCTC chr4A_2837 CGTGGGGCAACATCTC---GTGGGGCCACGCCGTGTCGCGGGACATGGTC chr7A_2837 CGTGGGGCAACATCTC---GTGGGGCCACGCCGTGTCGCGGGACATGGTC chr7A_2837 CGTGGGGAAACATCTC---GTGGGGCCACGCCGTGTCGCGAGACATGGTC chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CACTGGTGCCAACTTCCATTAGCTGTGCTTCCTGACCAGTGGTATGACAT chr7D_1_TraesCS7D01G009700 CACTGGTGCCAACTTCCATTAGCTGTGCTTCCTGACCAGTGGTATGACAT chr4A_47 CACTGGCGCCAACTCCCATTGGCTGTGCTTCCTGACCAGTGGTATGACAT chr7D_1029 ACGTGGCGCACCCTCCCTATTGCCATGGTGGCCGACCAGTGGTACGACAT chr7A_1029 ACGTGGCGCACCCTCCCTATTGCCATGGTGGCTGACCAGTGGTACGACAT chr4A_1141 CAATGGCGCACCCTCCCTATTGCCATGGTGGCCGACCAGTGGTACGACAT chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 CACTGGCACCACCTACCCCTCGCCATGGTGCCTGACCGATGGTACGACAT chr7D_2837 CACTGGCACCACCTACCCCTTGCTATGGTGCCCGACCGATGGTACGACAT chr4A_2837 CACTGGCACCACCTACCCCTCGCCATGGTGCCCGACCGATGGTACGACAT chr7A_2837 CACTGGCACCACCTACCCCTTGCTATGGTGCCCGACCGATGGTACGACAT chr7A_2837 CACTGGCACCACCTACCCCTCGCCATGGTGCCTGACCGATGGTACGACAT chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ------S-------S-----S----------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CCAAGGTGTCTTGTCAGGCACCATCACTGTGCTTCCTAACGGCACACTCA chr7D_1_TraesCS7D01G009700 CCAAGGTGTCTTGTCAGGCACCATCACTGTGCTTCCTAACGGCACACTCA chr4A_47 TCAAGGTGTCTTGTCAGGCAGCATCACTGTGCTTCCTAACGGCACGCTCA chr7D_1029 CCTCGGGGTCCTCTCGGGCTCTATGACGGTGCTACCCAATGGCACCGTCA chr7A_1029 CCTGGGGGTCCTTTCGGGCTCTATGACGGTGCTACCCAATGGCACGGTCA chr4A_1141 CCTCGGGGTTCTATCGGGCTCTATGACCGTGCTACCCAATGGCACGGTCA chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 TAACGGCGTTTTGACGGGCTCCGCCACCATACTTCCTGATGGCAAGGTCG chr7D_2837 CAAAGGCGTTTTGACGGGCTCCGCCACCATACTTCCTGATGGCAAGGTCG chr4A_2837 CAACGGCGTTCTGACGGGCTCCGCCACCATACTTCCCGATGGCAAGGTCG chr7A_2837 CAAAGGCGTTTTGACGGGCTCCGCCACCGTACTTCCCGATGGCAAAGTCG chr7A_2837 TGACGGCGTTTTGACGGGCTCCGCCACCATACTTCCCGACGGCAAGGTCG chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TCATGCTCTACACTGGTGCCACCAATGTATCCACCGTTGAGGTCCAGTGC chr7D_1_TraesCS7D01G009700 TCATGCTCTACACTGGTGCCACCAATGTATCCACCGTTGAGGTCCAGTGC chr4A_47 TCATGCTCTACACTGGTGCCACCAATGTCTCCACCGTCGAGGTCCAGTGT chr7D_1029 TCATGATCTACACGGGGGCCACCAACGCCTCCGCCATTGAGGTGCAGTGC chr7A_1029 TCATGATCTACACGGGGGCCACCAACGCCTCTGCCGTTGAGGTGCAGTGC chr4A_1141 TCATGATCTACACGGGGGCCACCAACGCCTCCGCCGTTGAGGTCCAGTGC chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 TCCTGCTCTACACAGGGAACACCGACACGCTCGCCC---AGGTACAGTGT chr7D_2837 TCCTGCTCTACACGGGGAACACCGACACCCTCGCCC---AGGTACAATGC chr4A_2837 TCCTGCTCTACACGGGGAACACCGACACCCTCGCCC---AGGTACAGTGC chr7A_2837 TCCTGCTCTACACGGGGAACACCGACACCCTTGCCC---AGGTACAGTGC chr7A_2837 TCCTGCTCTACACAGGGAACACCGACACGCTCGCCC---AGGTACAGTGC chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ----------------------------S--------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GTTGCCGTCCCCGACGACCCAAACGATCCCCTCCTCCGCCGCTGGACCAA chr7D_1_TraesCS7D01G009700 GTTGCCGTCCCCGACGACCCAAACGATCCCCTCCTCCGCCGCTGGACCAA chr4A_47 GTTGCCGTGCCCGAAGACCCAAACGACCCCCTCCTCCGCCGCTGGACCAA chr7D_1029 ATCGCCACCCCCGCCGACCCCAACGACCCCTTCCTCCGCCGCTGGACCAA chr7A_1029 ATCGCCACCCCCGCCGACCCCAACGACCCCTTCCTCCGCCGCTGGACCAA chr4A_1141 ATCGCCACTCCCGCCGACCCTACCGACCCCCTCCTCCGCCGCTGGACCAA chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 GTTGCCGAACCTGCAGACCCTCATGACCCTCTCCTCCGCACCTGGATCAA chr7D_2837 CTTGCCGTACCTGCTGACCCTCATGATCCTCTCCTTCGTACTTGGACCAA chr4A_2837 CTTGCCGTACCTGTTGACCCTCATGATCCTCTCCTTCGTACTTGGACCAA chr7A_2837 CTTGCCGTACCTGCTGACCCTCATGATCCTCTCCTTCGTACTTGGACCAA chr7A_2837 GTTGCCGAACCTGCAGACCCTCATGACCCTCTCCTCCGCACCTGGATCAA chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GCACCCCGCCAACCCCGTCCTCTTCTCGCCACCGTGGATCAGCACCAACG chr7D_1_TraesCS7D01G009700 GCACCCCGCCAACCCCGTCCTCTTCTCGCCACCGTGGATCAGCACCAACG chr4A_47 GCACCCCGCTAACCCCGTCCTCTCCTCGCCACCGTGGATCAGCACCAACG chr7D_1029 GCACCCCGCGAACCCCGTCATCTGGTCGCCGCCGGGGATCGGCACCAAGG chr7A_1029 GCACCCCGCCAACCCCGTCATCTGGTCGCCGCCGGGGATCGGCACCAAGG chr4A_1141 GCACCCCGCCAACCCCGTCATCTGGTCGCCGCCGGGGGTCGGCACCAAGG chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 GCACCCCGCCAACCCGGTCCTCTTCCCGCCCCCCGGGACATACAAAAAGG chr7D_2837 GCACCCCGCCAACCCTGTGCTCCTTCCGCCGCCCGGGACCGGCAAAAAGG chr4A_2837 GCACCCCGCCAACCCTGTGCTCCTTCCACCCCCCGGGACCAGCAAAAAGG chr7A_2837 GCACCCTGCCAACCCTGTGCTCCTTCCGCCCCCCGAGACCGGCAAAAAGG chr7A_2837 GCACCCCGCCAACCCGGTCCTCTTCCCGCCCCCCGGGACATACAAAAAGG chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 ACTTCCGAGACCCCACCTCCGCGTGGTATGATGGCTCTGATCACACATGG chr7D_1_TraesCS7D01G009700 ACTTCCGAGACCCCACCTCCGCGTGGTATGATGGCTCTGATCACACATGG chr4A_47 ACTTCCGAGACCCCACCTCCGCGTGGTATGATGGCTCTGATCACACATGG chr7D_1029 ATTTTCGAGACCCGATGACCGCTTGGTACGATGAATCTGATGACACATGG chr7A_1029 ATTTTCGAGACCCGATGACTGCTTGGTACGATGAATCTGATGACACATGG chr4A_1141 ATTTCCGAGACCCGATGACCGCTTGGTACGATGAATCTGATGACACATGG chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 ACTTCCGTGACCCCATGACCGCATGGTTTGACAAGTCCGACAACACATGG chr7D_2837 ACTTCCGCGACCCCATGACAGCATGGTTCGATAAGTCCGACAACACGTGG chr4A_2837 ACTTCCGCGACCCCATGACAGCATGGTTCGATAAGTCCGACAACACGTGG chr7A_2837 ACTTTCGCGACCCCATGACAGCATGGTTTGATAAGTCCGACAACACATGG chr7A_2837 ACTTCCGTGACCCCATGACCGCATGGTTTGACAAGTCCGACAACACATGG chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CGCACCGTCCTCGGGTCCAAGGATGACCACAATGGTCACCACGCTGGCAT chr7D_1_TraesCS7D01G009700 CGCACCGTCCTCGGGTCCAAGGATGACCACAATGGTCACCACGCTGGCAT chr4A_47 CGCACCGTCCTCGGGTCCAAGGATGATCACAATGGTCACCATGCCGGCAT chr7D_1029 CGCACCCTCCTCGGGTCCAAGGACGACCAGGACGGCCACCACGATGGGAT chr7A_1029 CGTACCCTCCTTGGGTCCAAGGATGACCACGACGGTCACCACGATGGGAT chr4A_1141 CGCACCCTCCTCGGGTCCAAGGACGACAACAACGGCCACCACGATGGCAT chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 CGCACCATGATCGGGTCCAAGGACAACAACGGG------CATGCTGGCAT chr7D_2837 CGCACCATGATCGGGTCCAAGGACGACAACGGT------CATGCTGGTGT chr4A_2837 CGCACCATGATCGGGTCCAAGGACGACAACGGG------CATGCTGGCGT chr7A_2837 CGCACCATGATCGGGTCCAAGGATGACAACGGT------CATGCTGGCGT chr7A_2837 CGCACCATGATCGGGTCCAAGGACAACAACGGG------CATGCTGGCAT chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CGCCTTCATGTACAAGACTAAGGACTTCCTTAACTATGAGCTCGTCCCGG chr7D_1_TraesCS7D01G009700 CGCCTTCATGTACAAGACTAAGGACTTCCTTAACTATGAGCTCGTCCCGG chr4A_47 CGCCTTCATGTACAAGACTAAGGACTTCCTTCACTATGAGCTCGTCCCTG chr7D_1029 CGCCATGATGTACAAGACCAAGGACTTCCTTAACTATGAGCTCATCCCGG chr7A_1029 CGCCATGATGTACAAGACCAAGGACTTCCTTAACTACGAGCTCATCCCGG chr4A_1141 CGCCATGATGTACAAGACCAAGGACTTCCTTAACTACGAGCTCATCCCGG chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 CGCCCTCATGTACAAGACAAAAGACTTCGTCAAGTTCGAGCTCATCCCGC chr7D_2837 CGCCCTCATGTACAAGACAAAAGACTTTGTCAAGTTCGAGCTCATCCCGC chr4A_2837 CGCCCTCATGTACAAGACAAAAGACTTCGTCAAGTTCGAGCTCATCCCGC chr7A_2837 CGCCCTCATGTACAAGACAAAAGACTTTGTCAAGTTCGAGCTCATCCCAC chr7A_2837 CGCCCTCATGTACAAGACAAAAGACTTCGTCAAGTTCGAGCTCATCCCGC chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GTATCTTGCACCGTGTCGAGAACACCGGCGAGTGGGAGTGCATCGACTTC chr7D_1_TraesCS7D01G009700 GTATCTTGCACCGTGTCGAGAACACCGGCGAGTGGGAGTGCATCGACTTC chr4A_47 GCATCTTGCACCGCGTCGAGAACACCGGCGAGTGGGAGTGCATCGACTTC chr7D_1029 GCATCTTGCATCGAGTCGAGCGCACCGGCGAGTGGGAGTGCATCGACTTC chr7A_1029 GTATCTTGCATCGAGTCCAGCGCACCGGCGAGTGGGAGTGCATTGACTTC chr4A_1141 GCATCTTGCATCGGGTCGAGCGCACCGGCGAGTGGGAGTGCATCGACTTC chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 GTCCGGTCCACCGCGTCGAGGGCACCGGCATGTGGGAGTGCGTCGACTTC chr7D_2837 GCCCGGTCCACCGTGTCGAGGGCACCGGCATGTGGGAGTGCGTCGACTTC chr4A_2837 GCCCGGTCCACCGCGTCGAGGGCACCGGCATGTGGGAGTGCGTCGACTTC chr7A_2837 GCCCGGTCCACCGCGTCGAGGGCACCGGCATGTGGGAGTGCGTCGACTTC chr7A_2837 GTCCGGTCCACCGCGTCGAGGGCACCGGCATGTGGGAGTGCGTCGACTTC chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 ------------------------------------AGTGCATCGACTTC reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TACCCGGTCGGTG------GCGGCAACAACTCATCA------GAAGTGTT chr7D_1_TraesCS7D01G009700 TACCCGGTCGGTG------GCGGCAACAACTCATCA------GAAGTGTT chr4A_47 TACCCAGTCGGTG------GCGACGACAACTCATCA------CAAGTGTT chr7D_1029 TACCCTGTCGGTCGCCGTAGCAGCGACAACTCATCG------GAGATGTT chr7A_1029 TACCCTGTCGGCCACAGAAGCAACGACAACTCATCG------GAGATGTT chr4A_1141 TACCCTGTCGGTCGCCGCACCAGCGACAACTCATCG------GAGATGTT chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 TACCCTGTTAGGG------GCAATAGCAACTCATCAC---AGGAAGAGTT chr7D_2837 TACCCTGTGGG---------CAACCGCAACTCATCAC---AGGAAGAGTT chr4A_2837 TACCCTGTTGGGG------GCAACAGCAACTCATCAC---ACGAAGAGTT chr7A_2837 TACCCTGTGGG---------CAACCGCAACTCATCAC---AGGAAGAGTT chr7A_2837 TACCCTGTTGGGG------GCAATAGCAACTCATCACTGCAGGAAGAGTT chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -----S-------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 TACCCG-------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GTACGTGCTGAAGGCGAGCATGGACGATGAACGACATGACTACTACTCAC chr7D_1_TraesCS7D01G009700 GTACGTGCTGAAGGCGAGCATGGACGATGAACGACATGACTACTACTCAC chr4A_47 ATACGTGCTCAAGGCGAGCATGGACGACGAACGACATGACTACTACTCGC chr7D_1029 GCACGTGTTGAAGGCGAGCATGGACGATGAACGACACGACTACTACTCGC chr7A_1029 GCACGTGTTGAAGGCGAGCATGGACGACGAACGGCACGACTACTACTCGC chr4A_1141 GCACGTGTTGAAGGCGAGCATGGACGACGAACGGCATGACTACTACTCGC chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 GTACGTCCTGAAGGCGAGCATGGACGATGAACGACATGACTACTACGCAT chr7D_2837 GTACGTGCTGAAGGCGAGCATGGACGATGAACGACATGACTACTACGCAT chr4A_2837 GTATGTCCTGAAGGCGAGCATGGACGATGAACGACATGACTACTACGCAT chr7A_2837 GTATGTGCTGAAGGCGAGCATGGACGATGAACGACATGACTACTACGCAT chr7A_2837 GTACGTCCTGAAGGCGAGCATGGACGATGAACGACATGACTACTACGCAT chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TGGGGAGGTACGACGCGGCGGCAAACACATGGACCCCAGTGGACCCTGAG chr7D_1_TraesCS7D01G009700 TGGGGAGGTACGACGCGGCGGCAAACACATGGACCCCAGTGGACCCTGAG chr4A_47 TGGGGAGGTATGACGCGGCGGCAAACACGTGGACGCCAGTGGACCCCGAG chr7D_1029 TAGGCACGTACGACTCGGCAGCAAACACGTGGACGCCGATTGACCCGGAC chr7A_1029 TAGGCACGTACGACTCGGCAGCAAACACGTGGACGCCGATCGACCCGGAG chr4A_1141 TAGGCACGTACGACTCTGCGGCAAACAGGTGGACGCCGATCGACCCGGAG chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 TGGGAAAGTATGACGCAGTGACCAACACATGGACACCGCTGGACCCAGAA chr7D_2837 TGGGAAGGTGCGACGCTGTGACCAACGCATGGACGCCGCTGGACCCAGAA chr4A_2837 TGGGAAAGTATGATGCGGTGACCAACACATGGACACCGCTGGACCCGGAG chr7A_2837 TGGGAAGGTACGACGCAGTGACCAACACATGGACGCCGCTGGACCCAGAA chr7A_2837 TGGGAAAGTATGACGCAGTGACCAACACATGGACACCGCTGGACCTAGAA chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ----------------------------------S-----------S--- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GCCGACTTGGGGATCGGGCTAAGGTACGACTGGGGCAAGCTTTATGCATC chr7D_1_TraesCS7D01G009700 GCCGACTTGGGGATCGGGCTAAGGTACGACTGGGGCAAGCTTTATGCATC chr4A_47 GCCGACTTGGGGATCGGGCTGAGGTACGACTGGGGCAAGCTTTATGCATC chr7D_1029 CTCGACTTGGGGATCGGGCTGAGGTACGATTGGGGTAAGTTTTATGCGTC chr7A_1029 CTCGACTTGGGGATCGGGCTGAGATACGACTGGGGTAAGTTTTATGCGTC chr4A_1141 CTCGACTTGGGGATCGGGTTGAGATACGACTGGGGTAAGTTCTACGCGTC chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 GCAGATGTGGGAATCGGACTGAGGTACAATTGGGGAAAGTTATTTGCGTC chr7D_2837 GCAGATGTGGGAGTCGGACTAAGGTACGATTGGGGAAAGTTCTTTGCGTC chr4A_2837 GCAGATGTGGGAATCGGACTGAGGTACAATTGGGGAAAGTTCTTTGCGTC chr7A_2837 ACAGATGTGGGAATCGGACTAAGGTACGATTGGGGAAAGTTCTTTGCGTC chr7A_2837 GCAGATGTGGGAATCGGACTGACGTACAATTGGGGAAAGTTATTTGCGTC chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CAGCTCATTCTATGATCCGGTGAAGCGGCGGCGCATTATGATGGGTTATG chr7D_1_TraesCS7D01G009700 CAGCTCATTCTATGATCCGGTGAAGCGGCGGCGCATTATGATGGGTTATG chr4A_47 CAGCTCATTCTATGATCCGGTGAAGCGGCGGCGCATTATGATGGGTTATG chr7D_1029 CACCTCGTTCTATGATCCGGCGAAGAAGCGGCGCGTGCTGATGGGGTACG chr7A_1029 CACCTCGTTCTATGATCCGGCAAAGAAGCGGCGCGTGCTGATGGGGTACG chr4A_1141 CACCTCGTTCTATGATCCGGCGAAGAAGCGACGCGTGCTGATGGGGTACG chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 CACGACATTCTATGATCCGGCAAAGCGGCGACGTGTGATGTGGGCGTATG chr7D_2837 CACGACATTCTATGATCCGACAAAGCGGCGACGCGTGATGTGGGCGTATG chr4A_2837 CACGACATTCTATGATCCGGCAAAACGGCGACGTGTGATGTGGGCGTATG chr7A_2837 CACGACATTCTATGATCCGACAAAGCGGCGACGCGTGATGTGGGCGTATG chr7A_2837 CACGACATTCTATGATCCGGCAAAGCGGCGACGTGTGATGTGGGCGTATG chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TCGGTGAGGTCGACTCCGCGAAGGCCGACGTAGCCAAAGGATGGGCCTCA chr7D_1_TraesCS7D01G009700 TCGGTGAGGTCGACTCCGCGAAGGCCGACGTAGCCAAAGGATGGGCCTCA chr4A_47 TCGGTGAGGTCGACTCCGTGCAGGCCGACGTCGCCAAAGGATGGGCCTCA chr7D_1029 TCGGCGAGGTCGACTCCAAGCGGGCTGATGTCGTGAAGGGATGGGCCTCA chr7A_1029 TCGGCGAGGTCGACTCCAAGCGGGCTGATGTCGTGAAGGGATGGGCCTCG chr4A_1141 TCGGCGAGGTCGACTCCAAGCGGGCTGATGTGGTGAAGGGATGGGCCTCA chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 TTGGTGAGACAGATTCCAACCGGACCGACCTCGCCAAGGGATGGGCAAAC chr7D_2837 TTGGTGAGACAGACTCCAACCGGACCGACCTCGCCAAGGGATGGGC---- chr4A_2837 TTGGTGAGACAGACTCCAACCGGACCGACCTCGCCAAGGGATGGGCAAAC chr7A_2837 TTGGTGAGACAGACTCCAACCGGACCGACCTCGCCAAAGGATGGGC---- chr7A_2837 TTGGTGAGACAGAATCCAACCGGACCGACCTCGCCAAGGGATGGGCAAAC chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ------------------S-S----------S------------------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 ATCCAGGTATATATCTATCTGTCCATACTACACATCGATAGCCTATGATT chr7D_1_TraesCS7D01G009700 ATCCAGGTATATATCTATCTGTCCATACTACACATCGATAGCCTATGATT chr4A_47 ATCCAGGTATATATCTATCTGTCTATACTATACATCGATAGCATATGATT chr7D_1029 ATTCAGGTATATATCTATCT------------------------------ chr7A_1029 ATTCAGGTATGTATCTATCT------------------------------ chr4A_1141 ATTCAGGTACACATCCATCT------------------------------ chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 CTCCAGGTATCTT------------TATTGTACATATATTTGATCTGTTT chr7D_2837 -------------------------------------------------- chr4A_2837 CTCCAGGTGACGT------------TATTGTACATCAATTTGATATGTTT chr7A_2837 -------------------------------------------------- chr7A_2837 CTCCAGGTATCTT------------TATTGTACATATATTTGATCTGTTT chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -----------------------S------S-----------S------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GT-------TTTACGATCTTGCATCGATCAT------------------- chr7D_1_TraesCS7D01G009700 GT-------TTTACGATCTTGCATCGATCAT------------------- chr4A_47 GT-------TTTATGATCTTGCGGCCATCAT------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 TACCACGTGTTTAGCATCTATCATCAGTTCCATTCGTTCTTTATGCATGC chr7D_2837 -------------------------------------------------- chr4A_2837 TACCACGTGTTTACCATCTATCATCAGTTCCATTAGTTCACTATGCATGC chr7A_2837 -------------------------------------------------- chr7A_2837 TACCACGTGTTTAGCATCTATCATCAGTTCCATTCGCTATTTATGCATGC chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------S------------------------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 TCGATATATATAGATATGACAAG--------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 TTGATATATTTAGATATGACAACAATGCGATCGTTAACTTGCATTT---- chr7A_2837 -------------------------------------------------- chr7A_2837 TCGATACATACATACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 ---------------------------------------------CATAG chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------G chr7A_2837 -------------------------------------------------- chr7A_2837 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAG chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 --------CATTGGTTCATTATGCATGTTTACTGTTTAGATAGATCAACG chr7D_1_TraesCS7D01G009700 --------CATTGGTTCATTATGCATGTTTACTGTTTAGATAGATCAACG chr4A_47 --------CATTGGTTCATTATGCATGTTTACTATTTAGATAGATCAACG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 TTATCTTGCATTCATTCATTATGCATGCTTGATAGATAGATTCTCGCT-- chr7D_2837 -------------------------------------------------- chr4A_2837 TCATCTTGCATTCATTCATTATGCATAATTGATACATAAATAGTCCCT-- chr7A_2837 -------------------------------------------------- chr7A_2837 TTATCTTGCATTAATTCATTATGCATGTTTGATAGATAGATTCTCGCT-- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ---------------------------------S---------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CATTGCCTCTTGAAAATGCTGGGGTTGTTAAATCAATGCAATTGCAAATT chr7D_1_TraesCS7D01G009700 CATTGCCTCTTGAAAATGCTGGGGTTGTTAAATCAATGCAATTGCAAATT chr4A_47 CATTGCCTCTTGAAATTGCTGCAGTTGTTAAATCAGTGCAATTGCAATGT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ---------------S-----SS------------S-----------SS- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TGCAATCGTTCTTCTCCGGTATGCAACGTACCTGCATGCTTAAAATGTTG chr7D_1_TraesCS7D01G009700 TGCAATCGTTCTTCTCCGGTATGCAACGTACCTGCATGCTTAAAATGTTG chr4A_47 TGCAAGCATTCTTCTCCGGTATGCAACATACATGCATGCTT-AAATGTTG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -----S-S-------------------S---S---------S-------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -----TCGTTCTTCTCCGGTATGCA------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 ------------TCTCCGGTATGCAACGTACC------------------ reverse_9217 -------------------------------------------------- forward_7242 ----------------------GCAACGTACCTGCATGCTTA-------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 AGGCCTGCATGGCTGATTGGTTGCGAAATATGGACCTATATGTAGGCCGC chr7D_1_TraesCS7D01G009700 AGGCCTGCATGGCTGATTGGTTGCGAAATATGGACCTATATGTAGGCCGC chr4A_47 ATGCCTGCATGGCTGATTGGCTGCGAAAAATGGACCTATACGTAGGCCGC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -S------------------S-------S-----------S--------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GC-GGCACCCGGCGGAAACATGTTAACCACATTTTCAATATATGTCTAG- chr7D_1_TraesCS7D01G009700 GC-GGCACCCGGCGGAAACATGTTAACCACATTTTCAATATATGTCTAG- chr4A_47 GCCGGCACCCGGCGGAAACATGTTAACCACATTTTCAATATATGTCTAGT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TTTTTTTTTGCATCGAATTGGGTCTGTTAGAAGGGAGAGAGAG-GATTGT chr7D_1_TraesCS7D01G009700 TTTTTTTTTGCATCGAATTGGGTCTGTTAGAAGGGAGAGAGAG-GATTGT chr4A_47 TTTTTTTTTGCATCGAATTGGGTCT------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 ------------------------TGTTAGAAGGGAGATAGAT-GTTTGG chr6D_4013 ----------------------TCTGTTAGAAGGGAGAGAGAGAGATTGT chr2B_4014 -----------------------CTGTTAGAAGG--GAGAGAGAGATTGG chr7D_4015 ------------------------TGTTAGAAGG--GAGAGAGAGATTGT chr2D_4015 ------------------------TGTTAGAAGGGAGAGAGAG-GATTCT chr7D_4016 -------------------------GTTAGAAGGGAGAGAGAGGGATTGT chr5A_4022 -------------------------------AGGGAGAGAGAGGGATTGG chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TGCGGAATATGATGGATGTATTATTCAGCCCCGAGGGCGAGTATATATTG chr7D_1_TraesCS7D01G009700 TGCGGAATATGATGGATGTATTATTCAGCCCCGAGGGCGAGTATATATTG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 T--GGAATATGATGGATGTATTATTGAGCCTCGAGGGCGAGTATATATTG chr6D_4013 TGCGGAATATGATGGATGTATTATTGAGCCTCGAGGGCGAGTATATATTG chr2B_4014 TGCGGAATATGATGGATGTATTATTGAGCCTCGAGGGCGAGTATATATTG chr7D_4015 TGCGGAATATGATGGATGTATTATTGAGCCTCGAGGGCGAGTATATATTG chr2D_4015 TGCGGAATATGATGAATGTATTATTGAGCCTCGAGGGCGAGTATATATTG chr7D_4016 TGCGGAATATGATGGATGTATTATTGAACCTCGAGGACGAATATATATCG chr5A_4022 T--CGAATATGATGGATGCATTATTGAGCCTCGAGGGCGAGTATATATTG chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------S----S------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 AGTACAAGACTTGGAGGGCAAGACGCCTCTCCTGGAGATAAGGTAGGAGA chr7D_1_TraesCS7D01G009700 AGTACAAGACTTGGAGGGCAAGACGCCTCTCCTGGAGATAAGGTAGGAGA chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 AGTACAAGACTTGGAGGGCAAGACGCCTCTCCTGGAGATAAGGTAGGAGA chr6D_4013 AGTACAAGACTTGGAGGGCAAGACGCCTCTCCTGGAGATAAGGTAGGAGA chr2B_4014 AGTACAAGACTTGGAGAGCAAGAAGCCTCTCTTGAAGATAAGGTAGGGGA chr7D_4015 AGTACAAGACTTGGAGGGGAAGACGCCTCTCCTGGAGATAAGGTAGGAGA chr2D_4015 AGTACAAGACTTGAAAGGCAAGACACCTC--CTAGAGATAAGATGGAAAT chr7D_4016 AGTATAAGGCTTGGAGGACAAGACGCCTCTTCTAGAGATAGGGTAGGAGA chr5A_4022 TGTACAAGACTTGGAGGGCAAGAAGCCTCTCTTGTAGATAAGATAGGAGA chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CGGATTACAAATCCTAGACTACCAAATACAAGTATCCCAAATATATCTCT chr7D_1_TraesCS7D01G009700 CGGATTACAAATCCTAGACTACCAAATACAAGTATCCCAAATATATCTCT chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 CGGATTACAAATCCTATACTACCAAATACATGTATCCCAAATATATCTCT chr6D_4013 CGGATTACAAATCCTAGACTACCAAATACAAGTATCCCAAATATATCTCT chr2B_4014 CGGATTACAAATCCTAGACTACCAAATACACGTATCCTAAATATATCTCT chr7D_4015 CGGATTACAAATCCTAGACTGCCAAATACAAGTATCCCAAATATATCTCT chr2D_4015 AACTCTATCTAATCCCGGGCAATCTCTACTA-----CCAAATATATCTCT chr7D_4016 TGAATTACAAATCCTAGACTATCAAACATATGTAACCCAAATATATTTCT chr5A_4022 CGGATTACAAATCCTAGACTACCAAATGCAAGTAACCCAAATATATCTCT chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 AACATCCCCCCGCAGTCGTAGCGGTAGCGTTGCGAACAACAGGAGCGTCG chr7D_1_TraesCS7D01G009700 AACATCCCCCCGCAGTCGTAGCGGTAGCGTTGCGAACAACAGGAGCGTCG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 AACATCCCCCCTCAGTCGTAGCGGTAGCGTCGCGAAAAACAGAAGCGTCG chr6D_4013 AACATCCCCCCGCAGTCGTAGCGGTAGCGTTGCGAACAACAGGAGCGTCG chr2B_4014 AACATCCCCCCGCAGTCGTAGCGGCAGTGTTGAGAACAACAGGAGCGTCG chr7D_4015 AACATCCCCC-ACAGTCGTAGCGGTAGCGTTGCGAACAACAGGAGCGTCG chr2D_4015 AACATCCTCCCGCAGTCGTAGCGGTAACGTTGCGAACAACAGGAGCGTCG chr7D_4016 AACATCCCCC-GTAGTCGTAGTGGTTGCGTTGCGAACAACAGGAGCGACG chr5A_4022 AACATCCCCCCACAGTCCTGGCAGTAGCGTCGCAGATAACAAGAGCATCG chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CGGACGGTCAGACTGGAGAGAATAGCAGCCGACGGACTGACATCCCCCCG chr7D_1_TraesCS7D01G009700 CGGACGGTCAGACTGGAGAGAATAGCAGCCGACGGACTGACATCCCCCCG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 CGGACGGTCTGACTGGAGAGAGTAGTAGCCAACGGGCTGACATCCCCCCG chr6D_4013 CGGACGGTCAGACTAGAGAGAATAGCAGCCGACGGACTGACATCCCCCCG chr2B_4014 CAGACGGTCAGACTGGAGAGAATAGCAGTCGACGGACTGACATCCCCGCG chr7D_4015 CGGACGGTCAGACTGGAGAGAATAGCAGCCGACGGGCTGACATCCCCCCG chr2D_4015 AGGACGGTCAGACTGGAGAGAATAACAGCCGACGGACTGACATCCCCCCG chr7D_4016 TGGACGGTCAGACTGGAGAGAATAGCAGCCGACGGACTGACATCCCC-CG chr5A_4022 CGGATGGTCAGACTGGAGAGAATAGCAGCCGACAGGCTGACATCCCCCCG chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CAGTCCTAGCGGGAGCGTCGTGGACGGTGTCGCGTCGCGGACGCGTTGAC chr7D_1_TraesCS7D01G009700 CAGTCCTAGCGGGAGCGTCGTGGACGGTGTCGCGTCGCGGACGCGTTGAC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 CAGTCGTAGCGGGAGCGTCGTGGACGGTGTCGCGCCACGGACGCATTGAC chr6D_4013 CAGTCCTAGCGGGAGCGTCGTGGACGGTGTCGCGTCGCGGACGCGTTGAC chr2B_4014 CAGTCGTAGCGGGAGCGTCGTGGACGGTGTCGCGTCGCGGACACGTTGAC chr7D_4015 CAGTCGTAGCGGGAGCGTCATGGACGGTGTCGCGTCGCGGACGCGTTGAC chr2D_4015 CAGTCCTAGCGGGAGCGTCATGGACGGTGTCGCATCGCGGACACGTTGAC chr7D_4016 CAGTCCTAGCGGGAGCGTCATAAACGGTGTCGCGTCGCGGACGCGTTGAC chr5A_4022 CAGTTGTAGTGGGAATGTCGTGGACGGTGTCGCGTCACGGAAGCGTTGAC chr3B_4306 ------------------------------CGCATCGCGGGGTCG-TGGC chr3D_4313 ------------------------------CGCATCGCGGAGTCG-CGGC chr3D_4326 ------------------------------------GCGGAGTCG-TGGC chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TGTAGAGGAAGCCGACGAGTTG-CTCAAGC-A--GATGATAG-CCCTTTG chr7D_1_TraesCS7D01G009700 TGTAGAGGAAGCCGACGAGTTG-CTCAAGC-A--GATGATAG-CCCTTTG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 TGTAGAGGAAGCCGACAAGTTG-CTCAAGC-G--GATGATAG-CCCTTTG chr6D_4013 TGTAGAGGAAGCCGACGAGTTG-CTCAAGC-GCGGATGAGAG-CCCTTTG chr2B_4014 TGTAGAGGAAGTCGACGAGTTG-CTCAAGC-G--GATGATAG-CCC-TTG chr7D_4015 TGTAGAGGAAGCCGACGAGTTG-CTCAAGC-G--GATGATAA-CCCTTTG chr2D_4015 TGTAGAGGAAGCCGACGAGTTG-CTCAAGC-G--GATGATAA-CCCTTTG chr7D_4016 TATAGAGGAAGACGACGAGTTG-CTCAAGT-G--GATGATAA-CCCTTTG chr5A_4022 TGTAGAGGAAGCTGACGAGTTT-CTCAAGT-A--GATGATAG-CCCTTTG chr3B_4306 TGGAGTGAAAACCGACGAGGTTGCTCAAGC-A--GGCGGTAGCCCTTTGT chr3D_4313 TGGAGTGGCAACCGACGAGGTTGCTCAAGCAA--GGCGGTAGCCCTTTGT chr3D_4326 TGGAGTGGAAACCAACGAGGTTGCTCAAGC-A--GGCGGTAGCCCTTTGT chr6B_4348 --------AAGCCGATGAGGTTGCTCAAGC-A--GGCGGTAGCCCTTTTT chr1D_4363 ------------------------TCAAGC-A--GGTGGTAGCCCTTTCT chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TGCCGATGTTGATGTAGCCGAGAGCATAGGGTGGTGTAGCCATGGTCGAG chr7D_1_TraesCS7D01G009700 TGCCGATGTTGATGTAGCCGAGAGCATAGGGTGGTGTAGCCATGGTCGAG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 TGTCGATGTTGATGTAGCCGAGAGCGTAGGGTGGTGTAGCCGTGGTCGAG chr6D_4013 TGCCGTTGTCGAGGAA-CCGAGAGCGT-GGGTGGTGTAGCCGTGGTCGAG chr2B_4014 TGCCGTTGTCGAGGTAGCCGAGAGCGTAGGGTGGTGTGCCCGTGGTCGAG chr7D_4015 TGCCGATGTCGATGTAGCCGAGAGCGTAGGGTGGTGTAGCCGTGGTCGAG chr2D_4015 TGCCGATGTCGATGTAGCCGAGAGCGTAGGGTGGTGTAGCCGTGGTCGAG chr7D_4016 TGCCGATGTCAATGTAGCCGAGAGCATAGGGTGGTGTAGCCGTGGTCGAG chr5A_4022 TGCCGATGTTGAGGTAGCCGAGAGCGTAGGGTGGTGTAGCCGTGGTCGAG chr3B_4306 GCCGTTTGTCGAGGTAGCCGAGAGCGGAGGGTGGTGTAGCCGTGGTCGAG chr3D_4313 GCCGTTTGTCGAGGTAGCCGAGAGCGT-GTGTGGTGGAGCCGTGGTCGAG chr3D_4326 GCCGTTTGTCGATGTAGCCGAGAGCGT-GGGTGGTGGAGCCGTGGTCGAG chr6B_4348 TGTCGTTGTCGATGTAGCCGAGAGCGT-GGGTGGTGGAGCCGTGGTCGAG chr1D_4363 GTCGTTTGTCGATGTAGCCGAGAGCGT-GGGTGATGGAGCCGTGGTCGAG chr2D_4391 ------TGTCGATGTAGCCAAGAGCGT-GGGTCGTGGAGCCGTGGTCGAG SNPs -----------------------------------------S-------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GTAGCCGTGCGAAGAACGCCGTGGTCGATGTCGAGTCGGGGTAGCCGGTG chr7D_1_TraesCS7D01G009700 GTAGCCGTGCGAAGAACGCCGTGGTCGATGTCGAGTCGGGGTAGCCGGTG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GTAGCCATGCGAAGAATGCCGTGGTCGATGTCGAGTTAGGGTGGCCGGTG chr6D_4013 GTAGCCGTGCGAAGAACGCCGTGGTCGATGTCGAGTCGGGGTAGCCGGTG chr2B_4014 GTAGCTGTGCGAAGAACGTCATGGTCGATGTCGAGTCAGGCTGGACGGTG chr7D_4015 GTAGCCGTG-------CGCCGTGGTCGATGTCGAGTCGGGGTAGCCGGTG chr2D_4015 GTAGCCGTGCGAAGAACGCCGTGGTCGATGTCGAGTCGGGGTAGCCGGTG chr7D_4016 GTAGCCGTGCGAAGAACGCCGTGGTCGATGTCGAGTCGGGGTAGCCAGTG chr5A_4022 GTAGCCGTGTGAAGAATGCCGTGGTCGATGTCGAGTCGGGCTAGCCGGTG chr3B_4306 GTAGCCGTGCGAAGAATGCCGTGGTCGATGTCGAATCGGGGTAGCCGGTG chr3D_4313 GTAGCCGTGCGAAGAATGCCGGGGTCGATGTCGAGTCGGGGTGGCCGGTG chr3D_4326 GTAGCCGTGCGAAGAATGCCGTGGTCGATGTCGAGTCGGGGTAGCCGGTG chr6B_4348 GTAGTCGTGCGAAGAATGTCGTGGTCGATGTCGAGTCGGGGTAGCCAGCA chr1D_4363 GTAGCCGTGCGATGAATGCCGTGGTCGATGTCGAGTTGGGGTAGCCAGTA chr2D_4391 GTAGCCGTGCGAAGAATGCCGTGGTCGATGTCGAGTCGGGGTGGCCGGAG SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TCGAGGGAGTCGCCGTGGAGCCGCAGGCGCAAGGAGGCGCCGAGTTAGTC chr7D_1_TraesCS7D01G009700 TCGAGGGAGTCGCCGTGGAGCCGCAGGCGCAAGGAGGCGCCGAGTTAGTC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 TCGAGGAAGTCGCCGTGGAGCCGCTGGCGCAAGGAGGCGCCGAGTTAG-C chr6D_4013 TTGAGGGAGTCGCCGTGGAGCCGCGGGCGCAAGGGGGCGCCGAGTTAG-C chr2B_4014 TCGAGGAAGTTGCCGTGGAGCCGTGGGCGCAAGGAGGCATCGAGTTAGTC chr7D_4015 TCGAGGGAGTCACCGTGGAGCCGCAGGCGCAAGGAGGCGCCGAGTTAGTC chr2D_4015 TCGAGGGAGCCGCCGTGGAGCCGCGGGCGCAAGGAGGCACCGAGTTAGTC chr7D_4016 TCGAGGGAGTCACCGTGGAGCCGCGGGTGCAAGAAGGCGCCGAGTTAGTC chr5A_4022 TCAAGGGAAACGCCGTGGAGTCGCAGGCGCAAGGAGGTGCCGAGTTAG-C chr3B_4306 TCGAGGAAGTCGCCATGGAGCCGCGGGCGCAAGGAGGCGCCGAGTTAG-C chr3D_4313 TCGAGGAAGTCGCCGTGGAGCCGCGGACGCGAGAGGGTGCCGAGTTAG-C chr3D_4326 TCGAGGAAGTCGCCATGGAGCCGCGGGCGGAAGGGGGCGCCGAGTTAG-C chr6B_4348 TCGAGGAAGTCGCCGTGGAGCCGCGGGCGCAAGGAGGCGCCGAGTTAGTC chr1D_4363 TCGAGGAAGTCGTCGTGGAGCCACGGGCGCAAGAGGGCGCCGAGTTAG-C chr2D_4391 TCGAGGAAGTCGCCGCGGAGCCGCGGACGCAAGAGGGCGCCGAGTTAG-C SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 ATGGGCGCAG--------TGGTGTCGAAGAAGTGATGCGCCAGGAAGGAG chr7D_1_TraesCS7D01G009700 ATGGGCGCAG--------TGGTGTCGAAGAAGTGATGCGCCAGGAAGGAG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 ATGGGAGCAG--------TGGTGTCGAAGTAGTGGTGCACCGGGAAGAA- chr6D_4013 ATGGGCGCAG--------TGGTGTCGAAGAAGTGATGCGCCAGAAAGGAG chr2B_4014 ATAGGCGCAG--------TAGTGGTGCACCAGGGA-----------GAA- chr7D_4015 ATGGGTGCAG--------TGGTGTCGAAGAAGTGATGCGCCAGGAAGGAG chr2D_4015 ATGGGCGCAG--------TGGTGTCGAAGAAGTGGTGCGCCAGGAAGGAG chr7D_4016 ATGGGCGCAGACGCGCAGTGGTGTCGAAGTAA-GGTGCCCCGGGTAGAG- chr5A_4022 ATGGTCGCAG--------TGATGTCGAAGTATGGA-----------GGTA chr3B_4306 ATGGGTGCAT--------TGGTGTCGAAGTAGTGGTGCGCCATGAAGAA- chr3D_4313 ATGGGCGCAG--------TGGTGTCGAAGTAGGGGTGCGCCGGAAAGAA- chr3D_4326 ATAGGCGCAG--------TGGTGTCGAAGTAGGGGTGCGCCGGGAAGAA- chr6B_4348 GTGGGCGCAG--------TGATGTCGAAGTAGTGGTGCGCCAGGAAGTA- chr1D_4363 ATGGACGCAG--------TGGTGTCGAAGTAGGGGTGCGCCGGGAAGAA- chr2D_4391 ATGGGCACAA--------TGGTGTCGAAGTAGGGGTGCGCCGGGAAGAA- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 AATGGTGTTGACGACGCGTCGCGCCGGGTTTGCCAACCCCGGGG-ACACA chr7D_1_TraesCS7D01G009700 AATGGTGTTGACGACGCGTCGCGCCGGGTTTGCCAACCCCGGGG-ACACA chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 AATGTTGTTGACGATGCGTCGCGGCGGGTTTGCCAAGCCCGGGG-ACACA chr6D_4013 AATGGTGTTGACGACGCGTCGCGCCGGGTTTGCCAACCCCGGGG-ACACA chr2B_4014 GATGTTGTTTACGACGCGTCGCGCCGGGGTTGCCAAGCCCGGGG-ACACA chr7D_4015 AATGGTGTTGACGACGCGTCGCGCCGGGTTTGCCAACCCCGGGG-ACACA chr2D_4015 AATGGTGTTGACGACGCGTCGCGCAAGGGTTGCCAACCCCGAGG-ACACA chr7D_4016 GATGATGTTGACGAGGTGTCGCGTCGGGCTTGCCAAACCCGGGGGACACG chr5A_4022 GACGGTGTGGACGAAGCGTCGCGCCAGGTTTGCCAAGCCCGGGG-ACATG chr3B_4306 GATGTTGTTGACGATGCGTGGCGGTGCATTTGCCAAGCCCAGGG-ACACA chr3D_4313 AATGTTGTTGACGATGCGTTGTAGCGGGTTTGCCAAGCCCGGGG-ACACA chr3D_4326 AATGTTGTTGACGACGCGTCGCGGCGGGTTTGCCAAGCCCGGGG-ACACA chr6B_4348 GATGATGTTGACAACGCGTCACGCCAGGGTTGCCAACCCTGGGG-ACACA chr1D_4363 AGTGTTGTTGACGACGCGTCGCGCCGGGGTTGTCAGGCCCGGGG-ACATA chr2D_4391 AATGTTGTTGACGACGCGTCGCGGTGGGTTTGCCAAGCCCGGGG-ACACA SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TCGTAGACGAAGGCACGCGTCGGTGTTGCCAGCACCGGGCATGCGTAGAC chr7D_1_TraesCS7D01G009700 TCGTAGACGAAGGCACGCGTCGGTGTTGCCAGCACCGGGCATGCGTAGAC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 TCATGGACGAAGGCACGCACCGGTGTTGCCAGCACCGGGTATGTGTAGAT chr6D_4013 TCGTAGACGAAGGCACGCGTCGGTGTTGCCAGCACCGGGCATGCGTAGAC chr2B_4014 TCATAGACGAAGGCACGCATCAGTGTTGGCATCACTGGGCATGTGAAGAC chr7D_4015 TCGTAGACGAAGGCACGCGTCGGTGTTGCCAGCACCGGGCATGCGTAGAC chr2D_4015 TCATAGACGAAGGTACGCGTCGGTGGTGCCAGCACCGGTCATGCGTAGAC chr7D_4016 TAGTAGATGAAGGCACACATCGGTGTTGCCAGCACCGGGCATGCGTAGAC chr5A_4022 TCATGGACAAAGGCACGCATCGGTGTTGCCAGCACCGGGCATGTGCAGAC chr3B_4306 TCGTAGACGAAGGCACGCACCGGTGTTGCCACCACCAGGCATGCGTAGAC chr3D_4313 TCGTGGATGAAGGCATGCACCGGTGTTGCCAGCACCGGGCATGCGTAGAC chr3D_4326 TCGTGGACGAAGGCACCCACCGGTGTTGCCAGCACCGGGCATGCGTAGAT chr6B_4348 TCGTAGACGAAAGCACACGTCGGTGTTGCCAGCACCGGGCATGCGTAGAC chr1D_4363 TCGTAGAAGAAGGCACGCGTCAGTGTTGCCAGCACCGGGCATGCGTAGAC chr2D_4391 TCATGGACGAAGGCACGCACCGGTGTTGCCAGCACCGGGCATGCGTAGAA SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GGTCGAAGACGAAGTTGACGAAGCGCCGCACCAGGCTTGCCAGGCTCGGG chr7D_1_TraesCS7D01G009700 GGTCGAAGACGAAGTTGACGAAGCGCCGCACCAGGCTTGCCAGGCTCGGG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GGACGAAGACGAAGTTGACGAAGCATCG-ACCAGGCTTGCCAGGCCCAGG chr6D_4013 GGTCGAAGACGAAGTTGACGAAGCGCCGCACCAGGCTTGCCAGGCCCGGG chr2B_4014 GGACGAAGACGAAGTTGACGAAGCGCG----CAGGCTTGCCAGGCCTGGG chr7D_4015 GGTCGCAGACGAAGTTGACGAAGCGCCGCACTAGGCTTGCCAGGCCCGGG chr2D_4015 GGACGAAGACGAAGTTGACGAAGCGCCGCACCAGGCTTGCCAGGCCCGGG chr7D_4016 GGACGAACACGAAGTTGACGAAGCGTCG-ACCAGGCTTGCCAGGCCCGGG chr5A_4022 GGACGAAGACGAAGTTGACGAAGCGCCGCTCCATGCTTGCCAAGCCTGGG chr3B_4306 GGATGAAAAAGAAGTTGACGAAGCGCCG-ACCAGGCTTGCCAGGCCCGGG chr3D_4313 GGACGGAGATGAACTTGACGAAGCGCCG-ACCAGACTTGCCAGGCCCGGG chr3D_4326 GGATGAAGACGAAGTTGACGAAGCGCCG-ACCAGGCTTGCCAGGCCCAGG chr6B_4348 GGACGAAGACGAAGTTGACGAAGCGCCGCACCAGGCTTGCTAGGCCCGGG chr1D_4363 GGACGAAGACGAAGTTGACGAAGCGCCGCACCAGGCTTGCCAGGCCCGGG chr2D_4391 GGACGAAGACGAAGTTGACGAAATGCCG-ACCAGGCTTGCCAGGCCCTGG SNPs ---------------------------------------------S---- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GACACGTCGTGGACGAAGGCACTCGG--CGGTGTTGCCAGCACCGGTCAT chr7D_1_TraesCS7D01G009700 GACACGTCGTGGACGAAGGCACTCGG--CGGTGTTGCCAGCACCGGTCAT chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GACACGTCGTGGATGAAGGCA--CGC--CGGTGTTGCCAGCACCGGGCAT chr6D_4013 GACACATCGTGGACGAAGGCA--CGCGGCGGTGTTGCCAGCACCGGGCAT chr2B_4014 GACACGTTGTGGATGAAGGCA--CGCATTGGTGTCGCAAACAATGGGCAT chr7D_4015 GACACGTCGTGGACGAAGGCA--CGCGGCGGTGTTGCCAGCACCGGGCAT chr2D_4015 GACACGTCGTGGATGAAGGCA--CGCATCGGTGTTGCCAGCACCGGGCAT chr7D_4016 GACACGTCGTGGAGGAAGGCA--TGCATCGGTGTTGACAGCAACGGGCAT chr5A_4022 GACACGTCGTGGACGAAGGCA--CGCA---------------CCAGGCAT chr3B_4306 GACACGTTGTGGATGAAGGCA--TGCATCGGTGTTGCCATCACCGTGCAT chr3D_4313 GACACGTCGTGGATGAAGGCA--CGCATCGGTGTTGCCAGCACCGGGCAT chr3D_4326 GACACGTCGTGGATGAAGGCG--CGCATCGGTGTTGCCAGCACC-GGCAT chr6B_4348 GACACGTCGTGGACGAAGGCA--CGCGGTGGTGTTGCCAGCATCGGGCAT chr1D_4363 GACACGTCGTGGACGAAGGCA--CGCAGCTGTGTTGCCAGCACTGGGCAT chr2D_4391 GACACGTCGTGGATGAAGGCA--CGCATCGGTGTTGCCAGCACCGGGCAT SNPs ---------------------SS--S--------------------S--- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 ----------------------------------------------TCAT forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GCGTAGACT-GGGACCTGCACGAGCTGTACGCCATGTCGAAGAGGTCGGA chr7D_1_TraesCS7D01G009700 GCGTAGACT-GGGACCTGCACGAGCTGTACGCCATGTCGAAGAGGTCGGA chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 --------AAGGTACCTGCGGGATGTATACATGTGAACT----------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GCGTATACAAGGGACCTGCATGGGTTGTACGTCATGTCGGAGAAGTCGGA chr6D_4013 GCGTAGACT-GGGACCTGGACGAGCTGTATGCCATGTCGAAGAGGTCGGA chr2B_4014 GCGTAGACGAGGGGCCTGCATGAGCTGTATGCCATGTCGGAGAAGTCAGA chr7D_4015 GCGTAGACT-GGGACCTGCACGAGCTGTACGCCATGTCGAAGAGGTCGGA chr2D_4015 GCGTAGATGAGGGACCTGCACGAGCTGTACGCCATGTCGAAGAAGTCAGA chr7D_4016 GCGTAGACGAGGGACCTGCACGAGCTATACGCCATGTCGAGG-AGTCGGA chr5A_4022 GCGTAGACGAGGGACCTGCATGAGCTGTATGCCATGTCG---------GA chr3B_4306 GCGTAGACGAGGGACCTGCACGAGCTGTACGCCATGTCGGAGAAGTCGGA chr3D_4313 GCGTAGACGAGGGACCTGCACGAGCTGTATGCCATGTCGCAGAAGTCGGA chr3D_4326 GCGTAGATGAGGGACCTGCACGAGCTGTACACCATGTCGGAGAAGTCGGA chr6B_4348 GCGTAGACT-GGGACCTGCACGAGCTGTACGCCATGTCGAAGAAGTACGA chr1D_4363 GCGTAGACT-GGGACCTGCACGAGCTGTACGCCATGTCGAAGAGGTCGGA chr2D_4391 GCGTAGACGAGGGACCTGCACGAGCTGTACGCCATGTCGGAGAAGTCGGA SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 GCGTAGACTGGGACCT---------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GAGGCCAGCAGAGAAGGAC--TCGACGACGGTTGCAGCGC-CAATCAGCG chr7D_1_TraesCS7D01G009700 GAGGCCAGCAGAGAAGGAC--TCGACGACGGTTGCAGCGC-CAATCAGCG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GGGGCCAATAGAGAAGAAC--TCGACGACGATTGCGGCGT-CCATCGGCG chr6D_4013 GAGGCCAGCAGAGAAGGAC--TCGACGACGGTTGCGGCGC-CAATCGACG chr2B_4014 GGG-CCAGCAAAGAAGGAGATTCGACGACGTTTGTGGCGT-TAATCAGCA chr7D_4015 GAGGCCAGCAGAGAAGGAC--TCGACGACGGCTGCGGCGC-CACTCGGCG chr2D_4015 GGGGCCAGCAGAGAAGAAC--TCGAAGACAATTGCGGCGT-CCATCGGCG chr7D_4016 GAGGCCAGCAGAGAAGGAC--TCGACGATGGTTGCGGCGT-CCATCGACG chr5A_4022 GGGGGCAGTAGAGAAGAAC--TCAAGGACGATTGCGGCGTTCCATCGGCA chr3B_4306 GGGGCCAGCAGAGAAGAAC--TCGACAACGATTGTGGCG-TCCATCGGCT chr3D_4313 GGGGTCAGCAGAGAAGAAC--TCGATGACGATTGCGGCGT-CCATCGGCG chr3D_4326 GGGGCCAGCAGAGAAGAAC--TCGACGACGATTGTGGCGT-CCATCGGCG chr6B_4348 GAGGCCAGCAGAGAAGGAC--TCGACGACGGTTGCGGCGC-CAATCCGCG chr1D_4363 GAGGCCAGCAGAGAAGCAC--TCGACGACGGTTGCGGCAC-CAATCGGCG chr2D_4391 GGGGCCAGCAGAGAAGAAC--TCGACGACGATTGCGACGT-CCATCGGCA SNPs -----------------------------------S-------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CGCGGCCTATGTCGCCCGCGGTTGTCGGAGTAGATGAAGCGGTCGGGGTA chr7D_1_TraesCS7D01G009700 CGCGGCCTATGTCGCCCGCGGTTGTCGGAGTAGATGAAGCGGTCGGGGTA chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 CGGGGCCGATGTCAGCAACGGTGGTCGGAGTAGACAAAGTGGTCGGGGTA chr6D_4013 CGGGGCCAATGTCGCCCGCGGTTGTCGGAGTAGATGAAGTGGTCGGGGTA chr2B_4014 TCAAGCTGATGTCACCAACGGTGGTCGGAATAGACGAAGTGGTCAGGGAA chr7D_4015 CAGGGCCAATGTCGCCCGCGGTTGTCGGAGTAGATGAAGCGGATCGCGG- chr2D_4015 CGGAGCCAATGTCGCCCGCGGTTGTCGGAGTAGATGAAGCGGTCGGGGTA chr7D_4016 CGGAGTCGATGTTGCCCGCGGTTGTCGGAGTAGACAAAGTGGTCGGGGTA chr5A_4022 CGGGGCCGATGTCACCAATGGTGGTCAGAGTAGATGAAGTGGTCGGGGTA chr3B_4306 CGGGGCCGATGTCACCAACGGTGGTCGGAGTAGACGAAGTGGTCGGGGTA chr3D_4313 CGGGGCCGATGTCACCAACGGTGGTCGGAGTAGATGAAATGGTTGGGGTA chr3D_4326 CGGGGCCGATGTCACCAACGGTGGTCGGAGTAGACGAAGTGGTCGGGGTA chr6B_4348 CGGGGCCAATGTCGCCCGCGGTTGTCGGAGTAGATGAAGCAGTCGGGGTA chr1D_4363 CGGGGCCAATGTCGCCCGCGGTTGTCGGAGTAGATGAAGCGGTCGGGGTA chr2D_4391 CGGGGCCGATGTTACCAACGGTGGTCGGAGTAGACGAAGTGGTCGGGGTA SNPs --S----S------------------------------------------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GATGACGGCGACGCTGGCGACGAGCTGGTGC-T-GGACGAAGACGAAGTG chr7D_1_TraesCS7D01G009700 GATGACGGCGACGCTGGCGACGAGCTGGTGC-T-GGACGAAGACGAAGTG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GATGACGGCGATGCTGGCGACGGGCTGGTG-CTTGGAAGAAGACGAA-GG chr6D_4013 GATGACGGCGACGCTGGCGACGAGCTGGTGC-T-GGACGAAGACGAAGTG chr2B_4014 GATGACGGCGACGCTGACGACGGGCTGGTG-CTAGG-CGAAGACGAA-TG chr7D_4015 -------------------------------------------------- chr2D_4015 GATGACGGCGACACTGGCGGCGAGCTGGTG-CT-GGACGAAGACGAA-GG chr7D_4016 GATGACGGCGACGCTGG------GCTGGTACTT-GGACGAAGATGAA-AG chr5A_4022 GATGACGGTGACGCTGGCGACAGGCTGGTGCTT-GGACGAAGACGAA-GG chr3B_4306 GATGACGGCGACGCTGACGATGGGCTGGTGCCT-GGACGAAGACGAA-GG chr3D_4313 GATGACGGCGACGCTGGCGACGGGCTGGTGC-TTGGACGAAGACGAA-GG chr3D_4326 GATGACGGCGACGCTGGCGACGGACTGGTGCTT-GGACGAAGACGAA-GG chr6B_4348 GATGACGGCGACGCTGGCAACAGGTTGGTGC-T-GGACGAAGATGAA-GG chr1D_4363 GATGACGGCGACGCTGGCGACGAGCTGGTGC-T-GGACGAAGACGAA-AG chr2D_4391 GATGACGGCGACGCTGGCGACGGGCTGGTGCTT-GGACGAAGACGAA-GG SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GGGTGGACGGGCGGCGGCGACAGCTACGGAGGTAGCCGCGGCGGCGGC-- chr7D_1_TraesCS7D01G009700 GGGTGGACGGGCGGCGGCGACAGCTACGGAGGTAGCCGCGGCGGCGGC-- chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GTGTGGACGGGCGGCGGTGGCGGCTATGAAGGTAGCGGCGGCGGCGGC-- chr6D_4013 GGGTGGACGGGCGGCGGCGACAACTACGGAGGTAGCCGCGGCGGCGGC-- chr2B_4014 AGGTGGACGGGCGGCGGCGGC---TATGGGGATA---------------- chr7D_4015 -------------------------------------------------- chr2D_4015 GGGTGGACGGGCGGCGGCGGCGGCTACGGAGGTAGCGGCGGC---AGCGG chr7D_4016 GGGTGGACGGGCGG------------------------------------ chr5A_4022 GGGTGGACGAGCGGCGGCGGC---TACAGAAGTAGCGGCGACAGTGGC-- chr3B_4306 GGGTGGATGGGCGGCAGCGGCGTCTACGAAGGTAGCGGCGGC---GAAGG chr3D_4313 GGGTGGATGGGCGGCGGCGGCGGCTACGAAGGTAGCGGCGAC---GGCGG chr3D_4326 GGGTGGACGGGCGGCAGCGGCGGCTATGAAGGTAGCGACGGC---GGCGG chr6B_4348 GGGTGGACGGGCGGCTGCAGCGGCTACGGAGGTAGCGGCGGC---GGCGG chr1D_4363 GGGTGGACGGGCGGCGGCGGCGGCTACGAAGGTAGCGGCGGC---GGC-- chr2D_4391 GGGTGGACGGGCGGC---GGCGGCTACGAAGGTAGCGGCGGC---GGCGA SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -CAAAGAAG-AGCGGCGGCGGCGGCCTGACG---GCGGCGGCGGCGGCTA chr7D_1_TraesCS7D01G009700 -CAAAGAAG-AGCGGCGGCGGCGGCCTGACG---GCGGCGGCGGCGGCTA chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -CAAAGAAG-AGCGGCGGCAGTGGCCTGACG---ACAGCGGCGGCGGCTA chr6D_4013 -CAAAGAAG-AGCGGCGGCGGCGGCCTGACG---GCGGCGGCGGCGGCTA chr2B_4014 --------------GCGGCGACAACCTGATG---GCGGCGGCCGCGGCTA chr7D_4015 -------------------------------------------------- chr2D_4015 CTACGGAGGTAGCGGCGGCAGCGGCCAAAGAAGAGCGGCGGCGGCGGCTA chr7D_4016 -------------------------------------------------- chr5A_4022 -CAAAGAAG-AGCGGTGGTGGCGGCCTAACG---ACGGCAACAACGGCTA chr3B_4306 CCAAAGAAG-AGCGGCGGCGAAGGTCTGACG---GCAGCGGCGGCGGCTA chr3D_4313 CTGAAGAAG-AGCGGCGGCGGCGGCCTGACG---GCGGCGGCGGCGGCTA chr3D_4326 CCAAAGAAG-AGCGGCGACGGCGGCCTA------ACGGCGGCGGCGGCTA chr6B_4348 CCAAAGAAG-AGCGACGGCAGCGGCCTGCCG---ACGGCGGCGGCGGCTA chr1D_4363 -CAAAGAAG-AGCGGCGGCGGCGGCTTGACG---GCGGCGGTTGCGGCTA chr2D_4391 CCAAAGAAG-AGCGGCGACGGCGGCCTGACG---GCGGCGGCGGCGGCTA SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GGTTAGGAGTGCGGCGGCGGTGCTCGAAGTAGGCGAAGAACCCTGACAGC chr7D_1_TraesCS7D01G009700 GGTTAGGAGTGCGGCGGCGGTGCTCGAAGTAGGCGAAGAACCCTGACAGC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GGTTAGGAGTGCGGCGGTGGTGCTCGAAGTAGGCGAAGAACCCTGACAGC chr6D_4013 GGTTAGGAGTGCGGCGGTGGTGCTCGAAGTAGGCGAAGAACCCTGACAGC chr2B_4014 GGTTAGGAGCGCGGCGGCGGTACTCGAAGTAGGCGAGAAACCCTGACAGC chr7D_4015 -------------------------------------------------- chr2D_4015 GGTTAAGAGTGCGGCGGCGGTGCTCGAAGTAGGCAAAGAACCCTGACAGC chr7D_4016 -------------------------------------------------- chr5A_4022 GGTTAGTAATGCGGCGGCGGTGCTCGAAGTAGGCAAGGAACCCGACAATG chr3B_4306 GGTTAGGAGTGCGGCGGCGGTGCTCGAAGTAGGCGAAGAACCTTAACAGC chr3D_4313 GGTTAGGAGTGCGGCGGCGGTGCTCGAAGTAGGCATAGAGCCCTGACAGC chr3D_4326 GGTTAGGAGTGCGGCAGCGGTGCTCGAAGTAGGCGAAGAACCCTGACAGC chr6B_4348 GGTTAAAAGTACGGCGGCGGTGCTCGAAGTAGGCGAAGAACCCTGACAGC chr1D_4363 GGTTAGGAGTGCGGCGGCGGTGCTCGAAGTAGGCGAAGAACCCTGACAGC chr2D_4391 GGTTAGGAGTGCGGCGGCGGTGCTCGAAGTACGCGAAGAACCCTGACAGC SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GTGACGAAGACCGGCGCGGACGGTGGCGTTCCCGCGCCAAGGGAGAC-GG chr7D_1_TraesCS7D01G009700 GTGACGAAGACCGGCGCGGACGGTGGCGTTCCCGCGCCAAGGGAGAC-GG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 ATGACGAAGACCGGCGCAGACGTTGACGTTCTCGCGCCAAGGAAGAC-GG chr6D_4013 GTGACGAAGACCGGTGCGGACGGTGGCGTTCCCGCGCCAAGGAAGAC-GG chr2B_4014 ATGACGAAGACCGGCACGGACGATGGCGTTCCCGCGCCAGGGGAGGT-GG chr7D_4015 -------------------------------------------------- chr2D_4015 GTGACGAAGACCGGCGCAGACGGTGGCGTTCCCACGCCAAGGAAGGC-GG chr7D_4016 -------------------------------------------------- chr5A_4022 TA-ACAAAGACAGGCACGGACAATGGCCTTCCCGCGCCAAGGGAGCCAC- chr3B_4306 GTGACGAAGACCGGCGCGGACGGTGGTGTTCCCGCGTCAAGGGAGAC-GG chr3D_4313 GTGACGAAGACCGGCGCGGACAGTGGCGTTCCCGCGCCAAGGAAGAC-GG chr3D_4326 GTGACGAAGACCGGCGCGGACGGTGGCGTTCCCGCGCCAAGGAAGAC-GG chr6B_4348 ATGACGAAGACTGGCGCGGACGGTGGCATTCCCGCGCCAAGGGAGAC-G- chr1D_4363 GTGACGAAGACCGGCACGGACGGTGGCGCTCCCGCGCCAAGGAAGAC-GG chr2D_4391 ATGACGAAGACCGGCGCGGACGGTGGCGTTCCCACGCCAAGGGAGACGG- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CGCGGTGCATACCACGGGAGGTCGACGCGCGGTGCCGGCAGAGTGGACCG chr7D_1_TraesCS7D01G009700 CGCGGTGCATACCACGGGAGGTCGACGCGCGGTGCCGGCAGAGTGGACCG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 CGCGGCGCATACCACGGGAGGTCCACGCGCGGTGACGGCTGAGCGGACGG chr6D_4013 CGCGGCGCATACCACGGGTGGTCGACGCACGGTGACGGCGGAGCAGACCG chr2B_4014 CGCGGTGCATACCATGGGAGGTCGACACGCGGTGACGGCAAAGTGGACCG chr7D_4015 -------------------------------------------------- chr2D_4015 CGCGGCCCATACCACGAGAGGTCGACACGCGGTGACGGCGGAGCGGACCG chr7D_4016 -------------------------------------------------- chr5A_4022 CGCGGTGCATACCACGAGAGGTTGACGCGTTGGAACGGCGGTC--GACCA chr3B_4306 CGCAGCGCATACCACGGGAGGTCGACGCGCGGGGACGGCTGAGTGGACCG chr3D_4313 CGTGGCGCATACCACGGGAGGTCGACGCGCGGTGACGGCGGAGCGGACCG chr3D_4326 CGCGGTGCATACCACGGGAGGTCGACGCGCGGTGACGGCTGAGCGAACCA chr6B_4348 CGCGGCGCATACCATGGGAGGTCGATGCGCGGTGACGGCGGAGTGGACCG chr1D_4363 CGCCGTGCATACCACGGGAGGTCGACGCGCGGTGACGGCGGAGCGGACCG chr2D_4391 CGCGGCGCATACCACGGGAGGTCGACGCGCGGTGACAGCGGAGTGGACCG SNPs ----------------------------------S--------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CGGGCCGCGGCGCTACGGCCC-AAGTGGCGACGCAG---CGGCGACAGGC chr7D_1_TraesCS7D01G009700 CGGGCCGCGGCGCTACGGCCC-AAGTGGCGACGCAG---CGGCGACAGGC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 CGGGCCTCAGCGGTACGGCCCGAAGGGGTGACGCAG---CTGCGGTAGGC chr6D_4013 CGGGCCGCGGCGCTACGGCCCGAAGGGGCGACACAG---CGGCGGCAGGC chr2B_4014 CGGGCCGTGGCGCTACGATCCGAACAGGCGACGCAG---CGGCGACGGGC chr7D_4015 -------------------------------------------------- chr2D_4015 CGGGCCGCGGCGCTACGGCCCGAAGGGGCGACGCAT---CGGCGGCAGGC chr7D_4016 -------------------------------------------------- chr5A_4022 CGGGTCGTGGCGCTACGACCCGAAGGGGCAACGCAGCATCGGCAGCAGGC chr3B_4306 CGGGTCGCGGCGCTACGGCCCGAAGGGGCGACGCAG---CGGCGGCAGGC chr3D_4313 CGGGCCGCGGCGCTACGGCCCAAAGGGGTGACACAG---CGGCAGCAGGA chr3D_4326 CGGGCCGCGGCGCTACGGCCCGAAGGGGTGACGCAG---CGGCGGCAGGC chr6B_4348 CGGGCCGCGGCGCTACGGCCCGAAGGGGCGACGCAG---CGGCGACAGGC chr1D_4363 CGGGTCACGGCACTACGGCCCGAAGGGGCAACGCAG---CGGCGGCAGGC chr2D_4391 CGGGCCACGGCGCTATGGCCCGAAGGGGCGACGCAG---CGGCGGCAGGC SNPs -------------------------S------------------------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GGGTCGGGGCGACGGCGGGAAGACCTCGAGGTGGCGGCGGGGACTGCGGG chr7D_1_TraesCS7D01G009700 GGGTCGGGGCGACGGCGGGAAGACCTCGAGGTGGCGGCGGGGACTGCGGG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GAGTCGGGGCGACGGCGGGAATACCTCTGGGCGGCGGTGGGGACCGCGGG chr6D_4013 GGGTCGGGGCGACGGCGGGAAGACCTCTGGGCGGCGGCGGGGACCGC-GG chr2B_4014 AGGTCGGGGCGACGTTGGGAAGACCTCAGGGCAGCGGCAGGGACCGC-GG chr7D_4015 -------------------------------------------------- chr2D_4015 GGGTCGAGGCGACGGCGGGAAGACCTCTGGGCGACGGCGGGGACTGCGGG chr7D_4016 -------------------------------------------------- chr5A_4022 GGGATGGGGTGACAGCGGGAAGACCTCGGGGCGGCAGCGGGGACCGC-GG chr3B_4306 GGGTCGGGGTGACGGCGGAAAGACCTCAGGGCGGCGGCGGGGACCGC-GG chr3D_4313 GGTTCGGGGTGACGGCAGGAAGACCTCGCGGCGGCGGTGGGGACCGC-AG chr3D_4326 GGGTCGGGGCGACGGCGGGAAGACCTCTGGGCGGCGGCGGGGACCGC-GG chr6B_4348 GGGTCAGGGCGACGGCGGGAAGACCTCGGGA-GGTGGCAGGGACCGC-AG chr1D_4363 GGGTCGGAGCGACGGCGGGAAGACCTCTAGGCGGCGGCGGGGACCGC-GG chr2D_4391 GGGTCGGGGTGACGGCGGGAAGACCTCGGGGTGGCGGCGGGGACCGC-GG SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -CCGCGACGCTGCGGCCCGAAGGGGCGACGCAACGGCGGTTCGCGAGTCG chr7D_1_TraesCS7D01G009700 -CCGCGACGCTGCGGCCCGAAGGGGCGACGCAACGGCGGTTCGCGAGTCG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -CCGCAGCGCTACGGCCCGACGGGGCGGTGCAGCGGTGGAGCGCTGGTCG chr6D_4013 -CCGCGACGCTGCGGCCCGAAGGGGCGACACAACGGCGGTTCGCGAGTCG chr2B_4014 GTCGTGGCACTACAG-CCGTAAGGGCAGCGCAGCGGCAGAGCGCGGGTCG chr7D_4015 -------------------------------------------------- chr2D_4015 -CCGCAACGCTGCGGCCAAAAGGGGAGACACAACGGCGGTTCGCGAGTCG chr7D_4016 -------------------------------------------------- chr5A_4022 GCCGTGGCTCTACAGCCTGAAGGGGCGGTGCGGCGGCGGAGCGCTGGTCG chr3B_4306 GCCACGACGCTGCGGCCCGAAGGGGCGACGCAATGGCGGTTCGCGAGTCG chr3D_4313 GCCGCGACGCTGCGGCCCGAAGGAGCGACGCAACGGCGGTTCGTGAGTCG chr3D_4326 GACGCGATGCTGCGGCCCGAAGGGGCGACACAACGGCT-TTCGCGAGTCG chr6B_4348 GCTGCGACGCTGCGGCCCGAAGGGGCGACGCAACGGCGGTTCACGAGTCG chr1D_4363 GCCGTGACGCTGCGGCCCGAAGCGGCGACACAATGGCGGTTCGCGAGTCG chr2D_4391 GCCGCGACGCTGTGGCCCGAAGGGGCGATGCAACGGCGGTTCGCGAGTCG SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GTGCCACCGCGGGGATGGCCTCGGGGCGGCGGCGGGGACCGCGTATCGCG chr7D_1_TraesCS7D01G009700 GTGCCACCGCGGGGATGGCCTCGGGGCGGCGGCGGGGACCGCGTATCGCG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GTGCAACCGCGGGGACGGCCTCGGGGTGGCGGCTGGGACCGGATATCGCG chr6D_4013 GTGCAACCGCGGGAACGGCTTCGGGGCGGCGGCGGGGACCGCGTATCGCG chr2B_4014 GTGCAACCGCGGGGATGGCCTCGGGACGGCGGCGTGGCCCGTGTGCCACG chr7D_4015 -------------------------------------------------- chr2D_4015 GTGCAACCGTGGGGACGGCCTCGGGGCGGCGGCGCGGACCGCGTATCGCG chr7D_4016 -------------------------------------------------- chr5A_4022 GTGCAACCGCGAGGACGTCCTCGGGGTGGCGGCGGGGACCACGTATCACG chr3B_4306 GTGCAGCCGCGGGGACGGCCTCTGGGCGGCGGCGGCGACCGCGTATCGCG chr3D_4313 GTGCAGCCGCGGGGACGGCCTCGGGGCGGCAGCGGGGACCGCGTATCGCG chr3D_4326 GTGCAACCGCGGGAACGGCCTCGGGGCGGCGGCGGGGACCACGTATCGCG chr6B_4348 GTGCAACCGCGGGGACGGCCTCGAGGCGGCGGCGGGGACCGCATATCGCG chr1D_4363 GTGCAACCGCGGGGACAACCTCGGGGTGGCGGCGGGGACCGCGTATCGCG chr2D_4391 GTCTAGCCGCGGGGACGGCCTCGGGGCGGCGGCGGGGACCGCGTATCGCG SNPs ----S--------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 A-CACTACGGCCCGAAGGGGCGACGCAGCGGCGACGCACGAGTCGATGCA chr7D_1_TraesCS7D01G009700 A-CACTACGGCCCGAAGGGGCGACGCAGCGGCGACGCACGAGTCGATGCA chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 G-CACTATGACCCGTAGGGGTGACGCAGCGGCGATGCACGAGTCGATGCA chr6D_4013 A-CACTACGGCCCGAAGGGGCGACGCAGCGGCGACGCACGAGTCGATGCA chr2B_4014 CTCGCTACGGCCCGATAGGGTGAC-CAGCGGCGGTGCTAGAGTCGGTGCA chr7D_4015 -------------------------------------------------- chr2D_4015 A-CACTACAGCCCGAAGGGGCGACGCAGCGGCGACACACGAGTCGATGCA chr7D_4016 -------------------------------------------------- chr5A_4022 G-CACTACGGCCCGAAGGAACGACGCAGCGGCGACGCACGAGTCGTTGCA chr3B_4306 G-CACTACGGCCCGAAGGGGCGAAGCAGCGGCGACGCACGAGTCGATGCA chr3D_4313 A-CACTACGGTCTGAAGGGGCGACGCAGCGACGACGCACAAGTCGATGCA chr3D_4326 A-CACTACGGCCCGAAGGGGCAACGCAGCGGCGATGCACAAGTCGATGCA chr6B_4348 G-CACTACGGCCCGAAGGGGCGACGCAGTGGCGACGCATGAGTCGATGCG chr1D_4363 A-CACTACGGCCCGAAGGGGCGACGCAGCGGCGACGCGCGAGTCGATGCA chr2D_4391 G-CACTACGGCCCGAAGGGGCGACGCAGCGACGACGCATGAGTCGATGCA SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GCCGCGAGGAGAACCACGGGGCGGCGGCGCTGCGGCCCGACGGGGCGACG chr7D_1_TraesCS7D01G009700 GCCGCGAGGAGAACCACGGGGCGGCGGCGCTGCGGCCCGACGGGGCGACG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 CCCGCGAGGAGAACCACGGGGCGGCGGCGCTGCGGCCCGATGGGGCAACG chr6D_4013 GCCGCGAGGAGAACCACGGGGCGGCGGCGCTGCGGCCCGACGGGGCGACG chr2B_4014 GCCACGGGGA---------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 GCCGCGAGGAGAACCACAGGGCGGCGGCGCTGCGGCCCGACGAGGCGACG chr7D_4016 -------------------------------------------------- chr5A_4022 GCCGCGAGGACAACCACGGGGCGGCGGTGTTGTGGCCCGATGGGGCGACG chr3B_4306 GCCGCGAGGAGAACCACAGGGCGGCGGCGCTGCGGCCCGACGGGGCGACG chr3D_4313 GCCGCGAGAAGAACCACGGGGTGGCGGCGCCGTGGCCCGATGGGGCGACG chr3D_4326 ACCGCGAGGAGAACCACGGGGCGGCGGCGCTGCGGCCCGACGGGGCGACA chr6B_4348 GCCGCGAGGAGAACCACGAGGCGGCGGCGCTGCGGCCTGATCGGGCGATG chr1D_4363 GCCGCGAGGAGAACCACGGGGCGGCGGCGCTGCGGCCCGACGGGGCGACG chr2D_4391 GCCGCGAGGAGAACCACGGGGCGGCGGCGCTGCGGCCCGACGGGGCGACG SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CAGCGGCAGCCCGATGCTCGATCGATGGAGAGGCGCGCTGAACTCGG-GG chr7D_1_TraesCS7D01G009700 CAGCGGCAGCCCGATGCTCGATCGATGGAGAGGCGCGCTGAACTCGG-GG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 CAGCGGCAGCCCGATGCTCAATCGGTGGAGAGGTGCGCTGAACTCAA-GG chr6D_4013 CAGCGGCAGCCCGATGCTCGATCGGTGGAGAGGCGCGCTGAACTCGG-GG chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 CAGCGGCAGCCTGATGCTCGATCGGTGGAGAGGCACGCTGAACTCGG-GG chr7D_4016 -------------------------------------------------- chr5A_4022 CAGTGGCAGCCCATTGCTCGATCGGTGGAGGGGCGTGCTAAACTCAG-GG chr3B_4306 CAGCGGCAGCCCGATGCTCGATCGGTGGAGAGGCGCGCTGAACTTGG-GG chr3D_4313 CAACGGCAGCCCGATGCTCGATCGGTGAAGAGGCGCGCTGAACTCGG-GG chr3D_4326 CAGCGGCAGCCCGATGCTCGATCGGTGGAGAGGCGCGCTGAACTCGG-GG chr6B_4348 CAGCGGCAGCCCGATGCTCGATCGGTGGAGAGGCGCGCAGTACTC-A-GG chr1D_4363 CAGCGGCAGCCCGATGCTCGATCGGTGGAGAGGCGCGCTGAACTCGA-GG chr2D_4391 CAGCGGCAGCCCGATGCTCGATCGATGGAGAGGCGCGCTGAACTC-AGGG SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 ACGATCTTTACGGGACCTGCGGAGGCGCGCGCAACCGACGGGCCAGGTCG chr7D_1_TraesCS7D01G009700 ACGATCTTTACGGGACCTGCGGAGGCGCGCGCAACCGACGGGCCAGGTCG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 ATGATCTTCACGGGACCTGCGGAGACGCACATAACCGACGGGCCAGGTCG chr6D_4013 ACGATCTTCACGGGACCTGCGGAGGCGTGCGTAACTGACGGGCCAGGTCG chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 ACGATCTTCACGGGACCTGCGGAGGCGCGCGTAACCGACGGGCCAGGTCG chr7D_4016 -------------------------------------------------- chr5A_4022 ACGATCTTCACGGGACCCGCAGAGGCGCGTGCAACCAACAGGCTAGGTCA chr3B_4306 ACGATCTTCACAGGACTTGCAGAGGCGCGCGTAACCGACGGGCCAGGTCG chr3D_4313 ACGATCTTCACGGGACCTGCAGAGGCGCGCGTAACCGACGGGCCAGGTCG chr3D_4326 ACCGTCTTCACGGGACCTGCGGAGGCGCGCGTAACCGACGGGCCAGGTCG chr6B_4348 ACGATCTTCACGGGACCTGCGGAGGCGCCCGTCACCAACGGGCCAGGTCG chr1D_4363 ACGATCTTCACGGGACCTGCGGAGGCGCGTGTAACCGACGGGCCCGGTTG chr2D_4391 ACGATCTTCACGGGACCTGCGGAGGCGCGCGTAACCGACGGGCCAGGTCG SNPs --------S----------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GTCGCACGGCGTAGATGAGGTGGATCGCGGCGGCGAGCGGATGATCAAGC chr7D_1_TraesCS7D01G009700 GTCGCACGGCGTAGATGAGGTGGATCGCGGCGGCGAGCGGATGATCAAGC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GTCGCGCGGCGTAGATGAGGCGGATCGTGGCGGCGAGCAGGTGATCAAAT chr6D_4013 GTCGCACGGCGTAGATGAGGCGGATTGTAGCGGCGAGCGGGTGATCAAGC chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 GTCGCGCGGCGTAGATGAGGCGGATCGCGGCGGCGGGCGGGTGATCAAGC chr7D_4016 -------------------------------------------------- chr5A_4022 GTCGTGTGGCGTAGATGAGGCGGATTCCAGCAACGAGCGGGTGATCAAGC chr3B_4306 GTCGCACGGCGTAGATGAGGCTGATCGCGGCGGCGAGCGGGTGATCAAGC chr3D_4313 GTCGCGCGGCGTAGATGAGGCGGATCGCGGCGGCGAGCGGGTGATCAAGC chr3D_4326 GTCGCGCGGCGTAGATGAGGGGGATCGCGGTGATGAGCGGGTGATCAAGC chr6B_4348 GTTGCGCGGCGTAGAGGAGGCGGATCACGGCGGCGAGCGAGTGATCAAGC chr1D_4363 GTCGTGCGGCATAGATGAGGCGGATCACGGCGGTGAGCGGATGATCAAGC chr2D_4391 GTCGCGCGGCGTAGATGAGGTGGATCGTGGCGGCGAGCGGGTGATCAAGC SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CGATCGCGCGCGAGGTCGGGGACGC----CGCTCGGTGGAGACGTGGTGG chr7D_1_TraesCS7D01G009700 CGATCGCGCGCGAGGTCGGGGACGC----CGCTCGGTGGAGACGTGGTGG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 CGATCATGCGCGAGGTCAGGTACGT----CGCTCGTTGGAGGCGTGGTGG chr6D_4013 CGATCGCGCGCGAGGTCGGGGACGC----CGCTCGGTGGAGGCGTGGTGG chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 CGATCGCGCGCGAGGTCGGGGACGC----CGCTCGGTGGAGGCGTGGTGG chr7D_4016 -------------------------------------------------- chr5A_4022 CGATCGTGCGCGAGGTTAGGGACGC----CGCTCGATGGAGGCAGGGTGG chr3B_4306 CGATCGCGCGCGAGGTAGGGGAAGC----CGCTCGGTGGAGGCGTGGTGG chr3D_4313 CTATCGCGCGCGAGGTCGGGGCCGC----CACTCGGTGGAGGCGTGGTGG chr3D_4326 CGATCGCGCGCGAGGTCAGGAACGC----CGCTCGGTGGAGGCGTGGTGG chr6B_4348 CGATCGCGCGCGAGGTCGGGGACGCCGC----TCGATGGAGGAGTGGTGG chr1D_4363 CGATCGCGCGCGAGGTCGGGGACGCCGCGCGCTCGATGGAGACGTGGTGG chr2D_4391 CGATCGCGCGCGAGGTCAGGGACGCCGC----TCGGTGGAGGCGTGGTGA SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CGGCGGAGTCCGAGATGAAGCTGGCGACGACGGACGGCGTGGGACGTCGT chr7D_1_TraesCS7D01G009700 CGGCGGAGTCCGAGATGAAGCTGGCGACGACGGACGGCGTGGGACGTCGT chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 CGGCGGAGTCTGAGAGGAAGCCGGCGGTGACGGACGGCGTGAGACATCAT chr6D_4013 CGGCGGAGTCCGAGATGAAGCCGGCGACGATGGACGGCATGGGACGTCGT chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 CGTCGGAGTCCGAGATGAAGCCGGCGACGACGGACGGCGTGGGACGTCGT chr7D_4016 -------------------------------------------------- chr5A_4022 CGGCAGAGTCCAAGAAGAGGCTGACAAAGACGGAC-----------TCGT chr3B_4306 CGGCGGAGTCCGAGATCAAGCCGGCGACGACGGACGGCGTGGGATGTCGT chr3D_4313 TGGCGGAGTCCGAGATGAAGCCAGCGACGACGGACGGCGTGGGACGTCGT chr3D_4326 CGGCGGAGTCCGAGCTGAAGCCGGCGACGACGGACGGCGTGAGACGTCGT chr6B_4348 CGGCGGAGTCCGGGATGAGGCCGGCGACGATGGACGGCGTGGGATGTCGT chr1D_4363 CGGCGGAGTCCGAGATGAAGCTGGCGACGACGGACGGCGTGGGACGTCGT chr2D_4391 CGGCGGAGTCCGAGATGAAGCCGGCGACGATGAACGGCGTGAGACGTCGT SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GCGGACGAGCTTGTCAGCACCGGCACCCGGGCTGCCAAAGCAACGCCGGC chr7D_1_TraesCS7D01G009700 GCGGACGAGCTTGTCAGCACCGGCACCCGGGCTGCCAAAGCAACGCCGGC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GCGAACGAGCTTGCCAGCACCGGCACTCGGGCTGCCAAAGCAACGCCGGC chr6D_4013 GCGGACGAGCATGTCAGCACCGGCACCTGGGCTGCCAAAGCAACGCCGGC chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 GCAGACGAGCTTGTCAGCACCGGCACCCGGGCTGCCAAAGCAACGTCGGC chr7D_4016 -------------------------------------------------- chr5A_4022 GCGGACGAGCACGTCAGCACCAGCACCCGGCCTGCCAAAGCAGTGCCGGC chr3B_4306 GCAGACAAGCTTGTCAGCACCGGCACCCAGGCTGCCAAAACAACGCTGGC chr3D_4313 GCGGACGAGCTTGTCAGCACCGGCACCCGGGCTGCCAAAGCAACGCCGGC chr3D_4326 GCGGCCGAGCTTGTCAGCACCGGCACCCGGGCTGCCAAAGCAACGCCGGC chr6B_4348 GTGGACGAGCTTGTCAGCACCGGCACCCGGGCTGCCAAAGCAACGCCGGC chr1D_4363 GCCGGCGAGCTTGTCAGCACTGGCACCCGGGCTGCCAAAGCAACGTCGGC chr2D_4391 GCGGACGAGCTTGTCAGCACCGGCACCCGGGCTGCCAACGCAACGTCGGC SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GCCCGGGCAGCGAGGCTCGAGTGACCAACGGAGCAGCGGCGCCCGAGTTG chr7D_1_TraesCS7D01G009700 GCCCGGGCAGCGAGGCTCGAGTGACCAACGGAGCAGCGGCGCCCGAGTTG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GCCCGGGCAGCGAGGCCCGAGCGACCAACGGAGCAGCGACGCCCGAGTTG chr6D_4013 GCCCGGGCAGCGAGGCCCGAGTGACCAACGGAGCAGCGGCGACCGAGTTG chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 GCCCGGGCAGCGAGGCCCGAGGGACCAACGGAGCAGCGGCGCCCGAGTTG chr7D_4016 -------------------------------------------------- chr5A_4022 TCCCGGGCAATGAGGCCCGAGCGACCAACGAACCAACAACGCCTGAGCTC chr3B_4306 GCCCGGGTAGAGAGGCCCGAGTGACCAACGGAGCAGCGGCGCCCGAGTTG chr3D_4313 GCCCGGGCAGCGAGGCCCGAGCGACCAACGGAGCTGCGGCGCCCGAGTTG chr3D_4326 GCCCGGGCAGCGAGGCCCGAGCGACCAACGGAGCAGCGGCGCCCGAGTTG chr6B_4348 GCCTGGGCAGTGAGGCCCAAGCGACCAACGGAGTATCGGCGCCCGAGTTA chr1D_4363 GCCCGGGCAGCGAGGCCCGAGTGACCAACGGAGTAGCGGCGCCCGAGTTG chr2D_4391 GCCCGGGCAGCGAGGCCCGAGCGACCAACGGAGCAGCGCCGCCCGAGTTG SNPs ----------------S--------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 ----------------TCGAGTGACCAACGGAGCAG-------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 AGGCAGCCAATGAGCCTGACGCAGCCGTCCC-----GATGCAGCCGAGGA chr7D_1_TraesCS7D01G009700 AGGCAGCCAATGAGCCTGACGCAGCCGTCCC-----GATGCAGCCGAGGA chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 AGGCAGCCAACGAGCCTGACGCAGCCGTCCC-----AACGCAGCTGAGGA chr6D_4013 AGGCAGCCAATGAGCCTGACGCAGCCATCCC-----GACGCAGCCAAGGA chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 AGGCGGCCGACAAGCCTGACGCAGCCGTCCC-----GACGCCGCCAAGGA chr7D_4016 -------------------------------------------------- chr5A_4022 GAGGCAGTTG-------------GCGAGCCT-----GACACAGTCGGGGA chr3B_4306 AGATGGCCGACGAGCCTGACGCAGTCGTCCC-----GACGCAGCCGAGGA chr3D_4313 AGGCAGCCGACGAGCCTGATGCAGCCGTCCC-----GACGCAGCCGAGGA chr3D_4326 AGGCAGCCGACGAGCCTGACGCAG-----CCGTCCCGACGCAGCCGAGGA chr6B_4348 AGACAGCCGACGAGCCTGACGCAG-----CC-----GACGCAGCCGAGAA chr1D_4363 AGGCAGCCAATGAGCCTGACGCAGCCGTCCC-----GACGCAGCCGAGGA chr2D_4391 AGGTAGCCGACGAGCCTGCCGCAG-----CCGTCCCGACGTAGCCGAGGA SNPs --------------------------------------S----------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CGAGGCCGGCGAGGTAGACCGCCGGGCCGCCGTGCAGACGCGGCGGAGGC chr7D_1_TraesCS7D01G009700 CGAGGCCGGCGAGGTAGACCGCCGGGCCGCCGTGCAGACGCGGCGGAGGC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 CGAGACCGGCAAGGTAGACCGCCGGGCCGCCGTGCAGACGCGGCGGAGGC chr6D_4013 CGAGGCCGGCGAGGTA-----CCGGGCCGCCGTGCAGACGCGGCAGAGGC chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 CGAGGCCGACGAGGTGGACCGCCGGGCCGCCGTGCAGACGCGGCGGAGGC chr7D_4016 -------------------------------------------------- chr5A_4022 CAAGGCCGGCGACTC--ACCGTAAGGCCGCCGTGCAAACGCGATGGATGC chr3B_4306 CGAGACTGGCGAGGTGGACCGCCGGGCCGCCGTGCAGACCCGGCGGAGGC chr3D_4313 CGAGGCCGGCGAGGTAGACCGCCGGGCCGCCGTGCAGATGCGGTGGAGGC chr3D_4326 AGAGGCCGGCAAGGTAGACCGCCGGGCCGCCGTGCAGACGCGGCGGAGGC chr6B_4348 CGAGGCCGGCGAGGTAGACCGCCGAGCCGCCGTGCAGACGCGGCGGAGGC chr1D_4363 CGAGGCCGGCGAGGTA-----CCAGGCCGCCGTGCAGACGCGGCGGAGGC chr2D_4391 TGAGGCC-GCGAGGTAGACCGCCGGGCCGCCGTGCAGACGCGGCGGAGGC SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GGATGGCG----------TGGATCGATTTACGGGCCGACGCGCGAGCAGC chr7D_1_TraesCS7D01G009700 GGATGGCG----------TGGATCGATTTACGGGCCGACGCGCGAGCAGC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GGGTGATG----------TGGATCGATTGGCGGTCCGGCGCGCGAGCGAC chr6D_4013 GG-TGATG----------TGGATCGATGGGCGGGCCGGCGCGCGAGCGAC chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 AGGTGATG----------TGG-TCGATGGGCGGGCCGGCGTGCGAGCGAC chr7D_4016 -------------------------------------------------- chr5A_4022 GGGTGGCGGTGGACGGCATGGATCGACGGGAGGGCCGGTGCGTGAACGGC chr3B_4306 GGGTGATG----------TGGATCGATGGGCGGGCCGGCGCGCGAGCGAC chr3D_4313 GGGTGATG----------TGGATCGATGGGCGGGCCAGCGTGCGAGCGAC chr3D_4326 GGGTGATG----------TGGATCGATGGGCGGGTCGGCGCGCGAGAAAC chr6B_4348 GGATGATG----------TGGATCGATGGGCGGGTCGGCACGCGAGCGAC chr1D_4363 GGGTGATG----------TGGATCGATGGGCGGGCCGGCGCGCGAGCGAC chr2D_4391 GGGTGATG----------TGGATCGACGGGCGGGCCGGCGCGCGAGCGAC SNPs ----------------------------SS-------S------------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 ---------CGGATGGCGTGGATCGATTT--------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GGCTATGATTGGCCGCCGCATGGTGCGAGGCCGCCGGGTGTAGGCGATGC chr7D_1_TraesCS7D01G009700 GGCTATGATTGGCCGCCGCATGGTGCGAGGCCGCCGGGTGTAGGCGATGC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GGCTATGATTGGCCGCCGCATGGCGCGAGGCCGCCGGGTCGGGGCGATGC chr6D_4013 GGCTATGATTGGCCGTCGCATGGCGCGAGGCCGCCGGGTTGGGGCGATGC chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 CGCTATGATTGGCCGTCGCATG--GCGAGGCCGCCGGGTCGGGGCGATGC chr7D_4016 -------------------------------------------------- chr5A_4022 AGCTGTGATGGGCCGCCGCATCGCGTGAGGCCGCCGGGTTGGGGCGATGC chr3B_4306 GGCTATGATTGGCTATCGCATGGCGCGAGGCCGCCGGGTCGGGGCGATGC chr3D_4313 GACTATGATTGGCCGTCGCATGACGCGAGGCCGCCGGGTCGGGGCGATGC chr3D_4326 GACTATGATTGGCCGTCGCATGGCGCGAGGCCGCCGGGTCGGGGCGATGC chr6B_4348 GACTATGATTGGTCGTCGCATGGCGCGTGGCTGCCGGGTCGGGGCGATGC chr1D_4363 TGCTATGATTGGTCGTCGCATGGCGCGAGGCCGCCGAGTCGGGGCGATGC chr2D_4391 GGCTATGATTGGCCGTCGCATGGCGCGAGGCCGCCGGGTCGGGGCGATGC SNPs -----------------------S---------------SSS-------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 ---------------------------------------GTAGGCGATGC forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 AGGTCTCCCGGTCGGAGGAGGGC-----------------GGCGACGGCG chr7D_1_TraesCS7D01G009700 AGGTCTCCCGGTCGGAGGAGGGC-----------------GGCGACGGCG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 AGGTGCCCCGGTCGGAGCAGGGC-----------------GGTGATGGCC chr6D_4013 AGGTGTCCCGGTCAAAGCAGGGC-----------------CGTGACGGCC chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 AGGTGTCCCGGTCGGAGCAGGGCGGTGACGGCCGGCGCAGGGTGACGGCC chr7D_4016 -------------------------------------------------- chr5A_4022 AGGAGT-CCGGTCGCAGCAGGGC-----------------GGCAACGGCC chr3B_4306 AGGTGTCTCGGTCGGAGCAGGGC-----------------GGTGACGGCC chr3D_4313 AGGTGTCCCGGTCGGAGCAGGGC-----------------GGTGACGGCC chr3D_4326 AAGTGTCC-GGTCGGGGCAGGGC-----------------GGTGACGGCC chr6B_4348 AGGTGTCCCGGTCGGAGCGGGGC-----------------GGTGACGACC chr1D_4363 AGGTGTCCCAGTCGGAGTAGGGC-----------------GGTGACGGCC chr2D_4391 AGGTGTCCCGGGCGGAGCGGGGC-----------------GGTGACGGCC SNPs ----S------------S-------------------------------S forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 AGGTCTCC------------------------------------------ forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GGCGCAGGGCGACGGGCGGGCCGGCGCGCGGACGACGGCCTTGAGGGCTG chr7D_1_TraesCS7D01G009700 GGCGCAGGGCGACGGGCGGGCCGGCGCGCGGACGACGGCCTTGAGGGCTG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GGCTCAAGGCGACGGGCGGACCGACGCGCGGACGGTGGCTGGCCCTGACG chr6D_4013 GGCGCAGGGCGACGGGCGGACCGACGCGCGGACGGTGGCTGGCCCTGACG chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 GGCGCAGGGCGACGGGCGGACCGACGC------------TGGCCCTGATG chr7D_4016 -------------------------------------------------- chr5A_4022 GGCGTAGGGCGACGGGCGGGCCAATGCACGGACGGTGGCTGGCCCTGACG chr3B_4306 GGCGCAGGGCGACGGGCGGACCGCCGCGCGGACGGCGGCTGGCCCTAACG chr3D_4313 GGTGCAGGGCGACGAGCGGACCGACGCGTGGACGGCGGCTGGCCTTGACG chr3D_4326 GGCGCAGGGCGACGGGCGGACCGACGCGCGGACGGCGGCTGGCCCTGACG chr6B_4348 GGCGCAGGGCTACGGGCAGACCGACGCGCGGACGCCGGCCGGCCCTGACG chr1D_4363 GGCGCAGGGCAGCGGGCGGACCGACGCGCAGACGGCGACTGGCCCTGACG chr2D_4391 GGCGCAGGGCGACGGGCGGACCGACGCACGGACGGCGGCTGGCCCTGACA SNPs -----------------------S----------S-----SSSSSS-S-- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CCT------GTTGCGC--GAGGCCGCCGGCTCGGTGAAGTAGCCGGCCAG chr7D_1_TraesCS7D01G009700 CCT------GTTGCGC--GAGGCCGCCGGCTCGGTGAAGTAGCCGGCCAG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GGCCGCCTCG--GCGCACGTTGCCGCTGGGTCGGAGGAGAGGCCGGATGG chr6D_4013 GGCCGTCTGGGCGCGC--GTGGCCGCCGGGTCGGAGGAGAGGCCGGCTGG chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 GGCTGCCTCGGCGCGC--GTGGTCGCCGGGTCGGAGGAGAGGCCGGCTGG chr7D_4016 -------------------------------------------------- chr5A_4022 GGCCGCCTTG--GCACATGTGGCCTCTGGGTCAAAGGAGCGGCCGATCGA chr3B_4306 GGCCGCCTCG--GCGC--GTGGCCGCCGGGTCAGAGGAGAGGCCGGCTGG chr3D_4313 GGCCGCCTCGTCGCGC--GTGGCCGCCGGGTCGGAGGAAAGGCCGGCTGG chr3D_4326 GGCCACCTCGGCGCGC--GTGGCCGCCGGGTCGGAGGAGAGGCCGGCTGG chr6B_4348 GGCCGCCTGGGCGCGC--GTGGCTGCCGGGTCGGAGGAGAGGCCGGCTGG chr1D_4363 GGCCTCCTCGGCGCGC--GTGGCCGCCGGGTCGGAGGAGGAGCCGGCTGG chr2D_4391 GGCCGCCTCGGCGCGC--GTGGCCGCCTGGTCGAAGGAGAGGCCGGCTGG SNPs SSS--------S-------S---------S----S-S--S--------S- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TCGCGCCGGTGTCGGAGTAGAGGCGC-GGGGTGTC-GACGGCGGCGGCGG chr7D_1_TraesCS7D01G009700 TCGCGCCGGTGTCGGAGTAGAGGCGC-GGGGTGTC-GACGGCGGCGGCGG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 TCGCGCTGGGGTCGGAGTAGAGGCGC-TCGGGGTC-GACGGCGACGGTGG chr6D_4013 TCGCGCCAGGGTCGGAGTAGAGGCGC-TCGGGGTC-GACGGCGGCGGTGG chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 TCGCGCCGGGGTTGGAGTAGAGGCGC-TCGGAGTC-GACGGCGGCGGTGG chr7D_4016 -------------------------------------------------- chr5A_4022 TCGCACCAGGGTCGGAGTAGAGGTGCATTGGAGTC-GACGGTGGCGGCGG chr3B_4306 TCACGCCGGGGTCGGAGTAGAGGCGC-TCGGGGTC-GACGGCGGCGGTGG chr3D_4313 TCGCGCAGGGGTCAGAGTAGAAGCGC-TCGGGGTTTGACGGCGGCGGCGG chr3D_4326 TCGCGCTGGGGTCGGAGTAGAGGCGC-TCGGGGTC-GACGACGGCGGTGG chr6B_4348 TCGCGCCAGGGTCGAAGTAGAGGCGC-TCGGTGTC-GACAGCAGCGGCGG chr1D_4363 TCGTGCC-GGGTCGGAGTAGAGGCGC-TCAGGGTT-GACGGCGGCGGTGG chr2D_4391 TCGCGCCGGGGTCGGAGTAGAGGCGC-TTGAGGTC-GACGGCGGCGGTGG SNPs ---------S-----------------SS--------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GCGACGCAAACCGATCAAGATTAGATCGGAAAACCAAAAAGAAAAACGCC chr7D_1_TraesCS7D01G009700 GCGACGCAAACCGATCAAGATTAGATCGGAAAACCAAAAAGAAAAACGCC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 ----------CCGTTCATTATTATAAGATGTTCAAAAA-TTTCCTGATTC chr7D_2837 -------------------------------------------------- chr4A_2837 ----------CCGTTCATTATTACAAAATGTTCTAATTTTTTTCCGATTC chr7A_2837 -------------------------------------------------- chr7A_2837 ----------CCGTTCATTATTATAAGATGTTCAAAAA-TTTCCTGATTC chr6B_4008 GCGACGTAAACCGATCAAGATTAGATCGGAAAACAAAAAA-AAACCATGC chr6D_4013 GCGACGCAAACCGATCA----TAGATCGGAAAACCAAAAA-AGAAACGCC chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 GCGACGCAAACCGATCAAGAATAGATCGGAAAATCAAAAAGAAACCGCGC chr7D_4016 -------------------------------------------------- chr5A_4022 GCAATGCAAACAGATCAAGTTTAGATCATAAAAT----AA-AAAAACGTT chr3B_4306 GCGACGCAAACCGATCAAGGATAGATCTGAAAACCAAAAAGAAACCGTGC chr3D_4313 GCTACGCAAACCGATCAAGATTATATCAAAAACCAAAAAG-AAAAACGCC chr3D_4326 GCGACGCAAACCGATCAAGAATAGATCGGAAAACCAAAAAGAAACCGCGC chr6B_4348 GCGACGCAAACCGATCAAGCATAGATCGGAAAACCAAAAAGAAAAACACC chr1D_4363 GCGACGCAAACCGATCAAGAATAGATCGAAAAACCAAAAAGAAACCGCGC chr2D_4391 GCAACGCAAACCGATCAAGAATAGATCGGAAA-CCAAAAAGAAACCGCGC SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GATCAAAACGACCG-GCGAGAGAGCGAAAAAATCCG-GATCAAAGGATCG chr7D_1_TraesCS7D01G009700 GATCAAAACGACCG-GCGAGAGAGCGAAAAAATCCG-GATCAAAGGATCG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 GGATGTAT------------------------------------------ chr7D_2837 -------------------------------------------------- chr4A_2837 AGATATAT------------------------------------------ chr7A_2837 -------------------------------------------------- chr7A_2837 GGATGTAT------------------------------------------ chr6B_4008 GATCAAGATGACCG-GCGGGAGAGAGAAAAC--CCCGGAGC-AATGCTC- chr6D_4013 AATCAAGACGATCG-GCGAGAGAGAGAAGAC--CCG-GATCAAGGGATC- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 GATTAAGATGACCG-GCGGGAGAGAAAAAAAACCCA-GAGC-AAGGCTCG chr7D_4016 -------------------------------------------------- chr5A_4022 GATCAAGGTGGCCG-GCGGGAGAGAAAAAAATCTGA--ATCAAGAGATC- chr3B_4306 GATCAAGATGACCG-GCGGGAGAGAGAAAAC--CCCGGAGC-AAGGCTC- chr3D_4313 GGTCAAAACGAGCG-GCGAGAGAGCGAAAAAACCTG-GAGCAAAGGCTT- chr3D_4326 GATCAAGATGACCG-GCGGGAGAGAGAAAAC--CCCGGAGC-AAGGCTC- chr6B_4348 GATCAAAACGACCG-GCGAGAGAGTCAAAAAATCCG-GAGCAAGGGCTC- chr1D_4363 GATCAAGATGACCG-GCGGAAGAGAGAAAAC--CCCGGAGC-AAGGCTC- chr2D_4391 GATCAAGATGACCGCGCGGGAGAGAGAAAAC--CCCGGAGC-AAGGCTC- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GGAAAAAAGACTCTCTAGGGCAGCCGGCCAACACGGCCGGCGGACGAACC chr7D_1_TraesCS7D01G009700 GGAAAAAAGACTCTCTAGGGCAGCCGGCCAACACGGCCGGCGGACGAACC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 GGGGAAAAGACTCTCTAGGGCAGCCGGTCAACACGACCGGCGGACGAACC chr6D_4013 GGGAAAAAGACTCTCTAGGGCAGCCGGTCAACACGACCGGCGGACGAACC chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 GGGAAAAGA---CTCTAGGGCAGCCGGTCAACACGACCGGCGGACGAACC chr7D_4016 -------------------------------------------------- chr5A_4022 AGGAAAAAGACTCTCTAGGGCAGCCGATCAACACGACCGGCGGACGAACC chr3B_4306 GGGGAAAAGACTCTCTAGGGCAGCCGGTCAACGCGACCGGCGTATGAACC chr3D_4313 GGGAAAAAGACTCTCTAGGGCAGCCGGCCAACACGGCCGGCGGACGAACC chr3D_4326 GGGGAAAAGACTCTTTAGGGCAGCCGGTCAACACGACCGGCGGACGAACC chr6B_4348 GGGAAAAAGACTCTCTAGGGCAGCTGGTCAACACGACCGGCGGATGAACC chr1D_4363 GAGGAAAAGACTCTCTAGGGCAGCCGGTCAACACGACCGGCGGACGAACC chr2D_4391 GGAAAAAAGACTCTCTAGGGCAGCCGGTCAACACGACCGGCGGACGAACC SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CTATGTACGGGCGGCACGGCCCCCGGCGGCGGTCATGGAGGCCGACCGCC chr7D_1_TraesCS7D01G009700 CTATGTACGGGCGGCACGGCCCCCGGCGGCGGTCATGGAGGCCGACCGCC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 CTAGGTACGGGCGGCGCGGCCCCCGGCGGTAGTTATGGAGGCCGACCGCC chr6D_4013 CTAGGTATGGGCGGCGCGGCCTCCGGCGGCGATCATGGAGACCGACCGCC chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 CTAGGTACGGGCAGCGCGGCCCCCGGCGGCGGACATGGAGGCCGATCGCC chr7D_4016 -------------------------------------------------- chr5A_4022 CTAGGTACGGGCAGCGTGGCCCTCGACGGCGGTCATGGAGTCCGACCGCC chr3B_4306 CTAGGTACGGGCGGCGCGGCCCCGGGCGGCGGTCATGGAGGCCGACCGCC chr3D_4313 CTAGGTACGGGCGGCGCAGCCCCCGGCGGCGGTCATGGAGGCCGACCGCC chr3D_4326 CTAGGTACGGGCAGCGCGGCCCCGGT-GGCGGTCATGGAGGCCGACCGCC chr6B_4348 CTAGGTACGGGCGGCGTGGCCCCCGGCGGCGGTCATGGAGGCCGACCGCC chr1D_4363 CTAGGTACGGTCGGCGCGGCCCCCGGCGGCGGTCATGGAGGCCGACCGCC chr2D_4391 CTAGGTATGGGCGGCGTGGC-CCCGGCGGCGGTCATGGAGGCCGACCGCC SNPs ---S-----------S---------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CCGGGGGCAGCGCGCGGGTGCGGAA---GCGGTGGCGGCTAGGGTTTAGG chr7D_1_TraesCS7D01G009700 CCGGGGGCAGCGCGCGGGTGCGGAA---GCGGTGGCGGCTAGGGTTTAGG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 CCGGGGGCGGCGCGCCGGTGCGGAAGCGGCGGCGGCGGCTAGGGTTTAGG chr6D_4013 CCGGGGGCGGCGCGGA---GCGGAAGCGACGGCG-CGGCTAGGGTTTGGA chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 CCGGGG-CGGCGCGCGGGTGCGGAA---GCGGCGGCGGCTAGGGTTTAGG chr7D_4016 -------------------------------------------------- chr5A_4022 CTAGGGGCGGCGGCAGGGCGAAAGTTGTG-GGCGACAGCTAGGGTTTGGA chr3B_4306 CCGGGGGCGGCGCGCGGGTGCGGAA---GCGGCGGCGGCTAGGGTTTAAG chr3D_4313 CCGGGGACGGCGCGCGGGTGCGGAA---GCGGTGATGGCTAGGGTTTAAA chr3D_4326 CCGGGGGCGGCGCGCGGGTGCGTAA---GCGGCGGCGGCTAGGGTTTAGG chr6B_4348 CCGGGGGCGGCACGCAGGTGCGGAA---GCGGCGACGGCTAGGGTTTAGG chr1D_4363 CCGGGGGCGGCGCGCAGGTGCGGAA---GCGACGGCGGCTAGGGTTTAGG chr2D_4391 CCGGGGGCGGCGCGCGGGTGCGGAA---GCGGCGGCGGCTAGGGTTTAGG SNPs --------S----------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 ATCGACTTGCGATAGATACCATGTTAGAAGGGAGAGTGAGGATTGTTGCG chr7D_1_TraesCS7D01G009700 ATCGACTTGCGATAGATACCATGTTAGAAGGGAGAGTGAGGATTGTTGCG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -----------ATTGACATG-TTTTACTGTGTTTATTCACTCATTTCGGT chr7D_2837 -------------------------------------------------- chr4A_2837 -----------ATAGACAC-ATTTTAGTATGTTTGTTTATTCATTTCAGT chr7A_2837 -------------------------------------------------- chr7A_2837 -----------ATAGACATG-TTTTACTGTGTTTATTCACTCATTTTGGT chr6B_4008 ATCGACTTGCGATAGATACCATGTTAGAAGGGAGAGAGAGGTTTGAT--G chr6D_4013 TCGGTTAGGCT---GATACCATGTTAGAAGGGAGAAAGAGATT-GTTGCG chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 ATCGACTTGCGATAGATACCATGTTAGAAGGGAGAGAGAGGATTGTTGCG chr7D_4016 -------------------------------------------------- chr5A_4022 TCGGTTAGGCT---GATACCATGTTAGAAGGGAGAGAGAGGGA-TTGGCG chr3B_4306 ATCGACTTGCGATAGGTACCATGTTAGAAGGGAGAGAGAGATTTGGT--G chr3D_4313 ATCGACTTGCGATAGATAC-ATGTTAGAAGAAAGAGAGAGGATTGAT--G chr3D_4326 ATCGACTTGCGATAGATACCATGTTAGAAGGGAGAGAGGGATTTGGT--G chr6B_4348 ATCGACTTGCGATAGATACCATGTTAGAAGGGAGAGAGAGGATTGGT--G chr1D_4363 ATCGACTTGCGATAGATACCATGTTAGAAGGGAGAGAGGGATTTGGT--G chr2D_4391 ATCGACTTGCGATAGATACCATGTTAGAAGGGAGAGAGAGGTTTGGT--G SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GAATATGATGGATGTA-TTATTGAGCCTCGAGGGCGAGTATATATTGAGT chr7D_1_TraesCS7D01G009700 GAATATGATGGATGTA-TTATTGAGCCTCGAGGGCGAGTATATATTGAGT chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 CCATATGT------------------------AGCATATATTAAAATATC chr7D_2837 -------------------------------------------------- chr4A_2837 CCGTATGT------------------------AGTTCATATTAAAATATC chr7A_2837 -------------------------------------------------- chr7A_2837 CCATATTT------------------------AGCATATATTAAAATATC chr6B_4008 GAATATGATGGATGTG-TTATTGAGCCTCGAGGGCGAGTATATATTGAGT chr6D_4013 GAATATGATGGATGTA-TTATTGAGCCTCGAGGGCGAGTATATATTGAGT chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 GAATATGATGAATGTA-TTATTGAGCCTCGAGGGCGAGTATATATTGAGT chr7D_4016 -------------------------------------------------- chr5A_4022 GAATATGATGGATG------------------------------------ chr3B_4306 CAATAGTCTA--TGTATTGCTTGAGCCTCGTGGGCATATATATAGGAGTA chr3D_4313 GAATAGTTTGAT-GTATTGTTTGATCCTCAAAGACATATATAT------- chr3D_4326 GAATAGTTTGATTGTATTGCTTGAGCCTCGTGGGCATATATATATAGAAG chr6B_4348 GAATAATTCG-TTGTATTGCTTGAGCCTCGTGGGCATATAAATAGGAGTA chr1D_4363 GAATAGTTCG-TTGTATTGCTTGAGCCTC--------------------- chr2D_4391 GAATAGTTCG-TTGTATTGCTTAAGCCTCGTGAGCATATATATAGGAGTA SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 ACAAGACTTGGAGGGCAAGACGCCTCTCCTGGAGATAAGGTAGGAGACGG chr7D_1_TraesCS7D01G009700 ACAAGACTTGGAGGGCAAGACGCCTCTCCTGGAGATAAGGTAGGAGACGG chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 CG------------------------------------------------ chr7D_2837 -------------------------------------------------- chr4A_2837 CA------------------------------------------------ chr7A_2837 -------------------------------------------------- chr7A_2837 CA------------------------------------------------ chr6B_4008 ACAAGACTTGGAGGGCAAGACGCCTCTCCTGGAGATAAGGTAGGAGACGG chr6D_4013 ACAAGACTTGGAGGGCAAGACGCCTTTCCTGGAGATAAGGTAGGAGACGG chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 ACAAGACTTGGAGGGCAAGACACCTC------------------------ chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 CATGA--------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 TACATGA------------------------------------------- chr6B_4348 CAA----------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 CAAAGAC------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 ATTACAAATCCTAGACTACCAAATACAAGTATCCCAAATATATCTCTAAC chr7D_1_TraesCS7D01G009700 ATTACAAATCCTAGACTACCAAATACAAGTATCCCAAATATATCTCTAAC chr4A_47 -------------------------------------------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 ---AAACATCGTATAATAGTGAACACAGGTAGTAATTATTTGTATTTGTG chr7D_2837 -------------------------------------------------- chr4A_2837 ---AAACATCTTATAATAGTGAAAGGAAGAAGTAATTCTTTGTATTTATG chr7A_2837 -------------------------------------------------- chr7A_2837 ---AAACATCGTATAATAGTGAACACATGTAGTAATTATTTGTATTTGTG chr6B_4008 ATTACAAATCCTATACTACAAAATACATGTATCCCAAATATATCTCTAAC chr6D_4013 ATTACAAATCCTAGACTACCAAATACAAGTATCCCAAATATATCTCTAAC chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 AGGGTCTTTATTCAAAGAAATAACATCCGGTTACAATCTGTCCATAGGCT chr7D_1_TraesCS7D01G009700 AGGGTCTTTATTCAAAGAAATAACATCCGGTTACAATCTGTCCATAGGCT chr4A_47 -------TTATTCAAAGAAATAACAGCTGGTTACAATCTGCCCATAGGCT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 ACTTCAAAAATATTTTGGCTATGCTTTTTCTCTGACTCATTTC------- chr7D_2837 -------------------------------------------------- chr4A_2837 ACTTCAAAAATATTTTGGCTATGCTTTTTTCCCGACTCATTTC------- chr7A_2837 -------------------------------------------------- chr7A_2837 ACTTCAAAAATATTTTGGCTATGCTTTTTCTCCGACTCATTTC------- chr6B_4008 A------------------------------------------------- chr6D_4013 AGG----------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ---SSSS--------------------S---------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GCTGATGAGAAAATCT-GGGCTTTGATCAAGCCAACTGTCTATACTCTCC chr7D_1_TraesCS7D01G009700 GCTGATGAGAAAATCT-GGGCTTTGATCAAGCCAACTGTCTATACTCTCC chr4A_47 GCTGATGAGAAAATTCAGGGCTTTGATCAAGCCAACTGTATATACTCTCC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs --------------SS-----------------------S---------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 AGCGT-------ACAAGCACGCCGAGCACATTGGTGGGCTGGAAAATTAA chr7D_1_TraesCS7D01G009700 AGCGT-------ACAAGCACGCCGAGCACATTGGTGGGCTGGAAAATTAA chr4A_47 AGCGTGCTGCGTACAAGCACGCTGAGCACATTGGTGGGCCGGAAAATTAA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 ------------------------------------------ACTATTAG chr7D_2837 -------------------------------------------------- chr4A_2837 ------------------------------------------AACATTAG chr7A_2837 -------------------------------------------------- chr7A_2837 ------------------------------------------ACTATTAG chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ----------------------S----------------S---------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GGTCCCTACTAACATGAATAAAAACTAGGCACTATAGTCTCCAATTCTTG chr7D_1_TraesCS7D01G009700 GGTCCCTACTAACATGAATAAAAACTAGGCACTATAGTCTCCAATTCTTG chr4A_47 GGTCTCTACTAACATGAAGAAAAACTAGGCACTATAGTCTCCAATTCTTG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 GCTCTCTGAGAGGATCGAATCTAACTCAAAAAGGTTCAGATTGAGCATTT chr7D_2837 -------------------------------------------------- chr4A_2837 GCTCTCTAAGAAGATCAAATCTAACTCAAAAAGGTTCAAATTGAGCATTT chr7A_2837 -------------------------------------------------- chr7A_2837 GCTCTCTGAGAAGATCGAATCTAACTCAAAAAGGTTGAGATTGAGCATTT chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ----S-------------S------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TAAGATAGGCGCCACAATCAAACATGAATTGTGGCGCGAGTTCCAGAGGG chr7D_1_TraesCS7D01G009700 TAAGATAGGCGCCACAATCAAACATGAATTGTGGCGCGAGTTCCAGAGGG chr4A_47 TAAGATAGGCGCCGCAATCGAACGTGAATTGTGGCGCGAGTTCCAGAGGG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 CCATCACGTTTGTGTTATAAGCCAGCTTG--------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 CCATCATGTTTG---TATAAGCCACCTCG--------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 CCATCACGTTTGTGTTATAAGCCAGCTTG--------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------S------------------------------------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TGATGAGATCCAAGCAGTCAACCTTCA--TGATCACATATGAAAACCCAC chr7D_1_TraesCS7D01G009700 TGATGAGATCCAAGCAGTCAACCTTCA--TGATCACATATGAAAACCCAC chr4A_47 TGACGAGATCCAAGCAGTCAACCTCCATGATCACACATGTGAAAACCCAT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -----------------------TACTTTTTCGCACATAAGAGAACCTTT chr7D_2837 -------------------------------------------------- chr4A_2837 -----------------------TACTTTTTAGCACATAAGAGAACCTTT chr7A_2837 -------------------------------------------------- chr7A_2837 -----------------------TACTTTTTCGCACATAAGAGAACCTTT chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ---S--------------------S-----S-S----------------S forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GTAGTTGGGCGAAGGTC--------TCGAAGGGCCAGCAACTCGACCATG chr7D_1_TraesCS7D01G009700 GTAGTTGGGCGAAGGTC--------TCGAAGGGCCAGCAACTCGACCATG chr4A_47 GTAGTTGGGCGAAGATCACCCCTTCTCGAAGGGCCAGCAGCTCAGCCACG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 TAAGTTGCCTACTGAATCCATGAGCAGGCAAGAGATAATCTGATGAACAG chr7D_2837 -------------------------------------------------- chr4A_2837 TAAGTTGCCTGCTGAATCCATGAGTAGGCAAGAGAAAAATTGGCGAATAG chr7A_2837 -------------------------------------------------- chr7A_2837 TAAGTTGCCTGCTGAATCCATGAGCAGGCAAGAGATCATCTGACGAACAG chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 ----------------------------CAAGAGATAAG----------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs --------------S------------------------S---SS---S- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 AATGGGTCCGAGACTCCCC--------TTACACCATGCTCCCAAGAATGC chr7D_1_TraesCS7D01G009700 AATGGGTCCGAGACTCCCC--------TTACACCATGCTCCCAAGAATGC chr4A_47 AATGGGTCCGAGACTCCTGGCAGGGGTTTACACCATGCTCCCAGGAATGC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 AAACATCTTATTAGCTAGAAGGAAAGGTAGTGGTTC-------------- chr7D_2837 -------------------------------------------------- chr4A_2837 AAACATCTTATTAGCTATAAGAAAAGGTAGTGGTTC-------------- chr7A_2837 -------------------------------------------------- chr7A_2837 AAACATCTTATTAGCTAGAAGAAAAGGTTGTGGTTC-------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -----------------SS------------------------S------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 AAGCATCATTGTACTAGTATTCTTTTCCAACCACTGTCATGCAAAGAAAA chr7D_1_TraesCS7D01G009700 AAGCATCATTGTACTAGTATTCTTTTCCAACCACTGTCATGCAAAGAAAA chr4A_47 AAGCATCACTGTACTAGTATTCTTTTCCAACCACTGTCATGCAAAGACAA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs --------S--------------------------------------S-- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 AACCTTTTCCAACTAATAATATACTAGTTGTTTTTTAATTTACCCTCATA chr7D_1_TraesCS7D01G009700 AACCTTTTCCAACTAATAATATACTAGTTGTTTTTTAATTTACCCTCATA chr4A_47 AACCTTTTCCAACTAATAATATACTAGTT-TTTTTTAATTTACCCTCATA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -----------------------------S-------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GTAGGTGCAAGAAGCTTAAATATTATTTACTTAATGATCGACAGGCCATC chr7D_1_TraesCS7D01G009700 GTAGGTGCAAGAAGCTTAAATATTATTTACTTAATGATCGACAGGCCATC chr4A_47 GTTGGTGCAAGAAGCTTAAATATTATTCACTTAATGATCGACAGGCCGTC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs --S------------------------S-------------------S-- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CGCTTGAATTTCTGGAGCAATTTTTGAAGTTCTTTATGTGAAGCCTTTGG chr7D_1_TraesCS7D01G009700 CGCTTGAATTTCTGGAGCAATTTTTGAAGTTCTTTATGTGAAGCCTTTGG chr4A_47 CGCTTGAATTTCTGGAGCAATTTTTGAAGTTCGTTATGTGAAGCCTTTGG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs --------------------------------S----------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TACCATTTTTTGTTCGTGTGGTGATTTCACCAGTAGAAAATCAGTTTTGT chr7D_1_TraesCS7D01G009700 TACCATTTTTTGTTCGTGTGGTGATTTCACCAGTAGAAAATCAGTTTTGT chr4A_47 CACCATTTTTTGTTCGTGTGGTGATTTCACCAGTAGAAAATCAGTTTTGT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs S------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TCATTTTTTTAGTTCTTGATTGATGTCAGTGTGCACTCATGAGCTTAACT chr7D_1_TraesCS7D01G009700 TCATTTTTTTAGTTCTTGATTGATGTCAGTGTGCACTCATGAGCTTAACT chr4A_47 TCATTTTTTTAGTTCTTGATTGATGTCAGTGTGCACTCATGAGCTTAACT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------TTGATATCAAAGTGTCATCATGATCACCGGA chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------CTGGTATCAAAGTGCCATCATGGTCTAGGGA chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------TTGATATCAAAGTGCCATCATGATCACCGGA chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 AACTAACTAACTAACTAACTACGTGCGTGCAGTCAG-------------- chr7D_1_TraesCS7D01G009700 AACTAACTAACTAACTAACTACGTGCGTGCAGTCAG-------------- chr4A_47 AAT------------TAACTACGTGCGTGCAGTCAG-------------- chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 ATTTCCTAGCTTGAATTAAAATGAACTCTCTAATTAATGGTGTATGATGT chr7D_2837 -------------------------------------------------- chr4A_2837 CTTACCTAGCTTGAATTAC--TGAACTCTCTAATTAATGGTGTATGATGT chr7A_2837 -------------------------------------------------- chr7A_2837 ATTACCTAGCTTGAATTAAAATGAACTCTCTAATTAATGGTGTATGATGT chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs --S-SSSSSSS-S-S----------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 ------TTCCAAGGACGGTGGCTCTGGACGAGAAAACCAGGACAAACCTC chr7D_1_TraesCS7D01G009700 ------TTCCAAGGACGGTGGCTCTGGACGAGAAAACCAGGACAAACCTC chr4A_47 ------TTCCAAGGACGGTGGCTCTGGATGACAAAACCAGGACAAACCTC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 AGGCGATTCCGAGGACGGTGGCGCTGGACGAGAAGACCCGGACGAACCTC chr7D_2837 -------------------------------------------------- chr4A_2837 AGGCGATTCCGAGGACGGTGGCGCTGGACGAGAAGACCCGGACGAATGTC chr7A_2837 -------------------------------------------------- chr7A_2837 AGGCGATTCCGAGGACGGTGGCGCTGGACGAGAAGACCCGGACGAACCTC chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CTCTTATGGCCTGTGGAGGAGATCGAGACCCTTCGCCTCAATGCCACCGA chr7D_1_TraesCS7D01G009700 CTCTTATGGCCTGTGGAGGAGATCGAGACCCTTCGCCTCAATGCCACCGA chr4A_47 CTCTTATGGCATGTGGAGGAGATCGAGACCCTTCGCCTCAATGCCACCGA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 CTCCAATGGCCGGTGGAGGAGATTGAGACCCTCCGTCATAATGCAACTGA chr7D_2837 -------------------------------------------------- chr4A_2837 CTCCAATGGCCGGTGGAGGAGATCGAGACCCTCCGTCACAACACCACTGA chr7A_2837 -------------------------------------------------- chr7A_2837 CTCCAATGGCCGGTGGAGGAGATTGAGACCCTCCATCATAATACAACTGA chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 ACTCAGCGACATCACCATTGAAACTGGCTTTGTCTTCTATGTCCCGCTCA chr7D_1_TraesCS7D01G009700 ACTCAGCGACATCACCATTGAAACTGGCTTTGTCTTCTATGTCCCGCTCA chr4A_47 ACTAAGCGACATCACCATCGAAACTGGCTCTGTCTTCCATGTCCCTCTCC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 CCTCAGTGGCATCACCATCAGCACTGGCTCCGTCTTCCCCCTGCATCTCC chr7D_2837 -------------------------------------------------- chr4A_2837 CCTCAGTGGCATCACCATTGGCACTGGTTCCATCACCGCCCTACATCTCC chr7A_2837 -------------------------------------------------- chr7A_2837 CCTCAGTGGCATCACCATCGGCACTGGCTCCATCTTCCCCCTGCATCTCC chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -----------------------------S-------S-------S---S forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GCCAAGCTGATCAACTCGACATCGAGGCCTCCTTCCGCCTCGACGCTTCT chr7D_1_TraesCS7D01G009700 GCCAAGCTGATCAACTCGACATCGAGGCCTCCTTCCGCCTCGACGCTTCT chr4A_47 GCCAAGCTGATCAACTCGACATCGAGGCCTCCTTCCGCCTTGACGCTTCT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 GGCAAGCCGCTCAGCTCGACATAGAGGCCTCCTTCCGCCTCAACACTTCT chr7D_2837 -------------------------------------------------- chr4A_2837 GCCAAGCCGCTCAGCTCGACATAGAGGCCTCGTTCCGCCTCAACACTTCT chr7A_2837 -------------------------------------------------- chr7A_2837 GGCAAGCCGCTCAGCTCGACATAGAGGCCTCCTTCTGCCTCAACACTTCT chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GCTATCGCTGCCCTCAATGAGGCCGACATCGGCTACAACTGCAGCAACAG chr7D_1_TraesCS7D01G009700 GCTATCGCTGCCCTCAATGAGGCCGACATCGGCTACAACTGCAGCAACAG chr4A_47 GCTATCACTGCCCTCAATGAGGCCGACATCGGCTACAACTGCAGCAGCAG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 GACATCGCAGCCCACAACGAGGCCGACATCGGCTACAACTGCAGCACTAG chr7D_2837 -------------------------------------------------- chr4A_2837 GACATCGCAGCCCACAACGAGGCCGACATCGGCTACAACTGCAGCACTAG chr7A_2837 -------------------------------------------------- chr7A_2837 GACATCGCAGCCCACAACGAGGCCGACATCGGCTACAACTGCAGCACTAG chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ----------------------------------------------S--- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 CGGTGGTGCTGCCTCCCGCGGTGCGCTTGGCCCCTTTGGCCTCATCGTCC chr7D_1_TraesCS7D01G009700 CGGTGGTGCTGCCTCCCGCGGTGCGCTTGGCCCCTTTGGCCTCATCGTCC chr4A_47 CGGTGGTGCTGCCTCCCGCGGTGCGCTTGGCCCCTTTGGCCTCATCGTCC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 CGGTGGTGCCACCAACCGGGGTGCGCTCGGCCCCTTCGGCCTCCTCCTCA chr7D_2837 -------------------------------------------------- chr4A_2837 CGGTGGTGCCACCAACCGGGGTGCACTCGGCCCCTTTGGCCTCCTCCTCA chr7A_2837 -------------------------------------------------- chr7A_2837 CGGTGGTGCCACCAACCGGGGTGCGCTCGGCCCCTTCGGCCTCCTCCTCA chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 --------------------------------CCTTTGGCCTCATCGTCC reverse_13378 -------------------------------------------------- input_sequence_1610 TTGCATCCAGCGACTGTTGTGGTGAGCAGACGGCAGTGTACTTCTATGTG chr7D_1_TraesCS7D01G009700 TTGCATCCAGCGACTGTTGTGGTGAGCAGACGGCAGTGTACTTCTATGTG chr4A_47 TCGCATCCAGCGACCGTTGTGGTGAGCAGACGGCGGTGTACTTCTATGTG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 CCAACGGTCACA---------GTGAACAAATGGCAATGTACTTCTACATG chr7D_2837 -------------------------------------------------- chr4A_2837 CCAACGGCCACA---------GTGAACAAATGGCAATGTACTTCTACGTG chr7A_2837 -------------------------------------------------- chr7A_2837 CCAACGGTCACA---------GTGAACAAATGGCAATGTACTTCTACATG chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -S------------S----------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 TT------------------------------------------------ reverse_13378 -------------------------------------------------- input_sequence_1610 TCCAGGGGCCTCGACGGGGCCCTTCAGACCAATTTTTGCCAAGACGAGTC chr7D_1_TraesCS7D01G009700 TCCAGGGGCCTCGACGGGGCCCTTCAGACCAATTTTTGCCAAGACGAGTC chr4A_47 TCCAGGGGCCTCGACGGGGCCCTTCAGACCAGTTTTTGCCAAGACGAGTC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 TCTAGGAGCCTTGACGGGGACCTCCGGACCCACTTCTGCCATGACGAGTC chr7D_2837 -------------------------------------------------- chr4A_2837 TCTAGGAGGCTCGACGGGGGCCTCCGGACCCACTTCTGCCATGAGGAGTC chr7A_2837 -------------------------------------------------- chr7A_2837 TCTAGGAGCCTTGACGGGGACCTCCGGACCCACTTCTGCCATGACGAGTC chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 ACGTTCTTCACGAGCCAGGGACGTGACGAAGCGGGTGGTGGGAAGCACGG chr7D_1_TraesCS7D01G009700 ACGTTCTTCACGAGCCAGGGACGTGACGAAGCGGGTGGTGGGAAGCACGG chr4A_47 ACGTTCTTCACGAGCCAGGGACGTGACGAAGCGGGTGGTGGGAAGCACGG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 GCAGTCATCGCTGGCCAGGAATGTTGTGAAGCGTGTGGTGGGCAGCACTG chr7D_2837 -------------------------------------------------- chr4A_2837 GCAGTCATCGCTGGCCAGGAATGTTGTGAAGCGGGTGGTGGGCAGCACCG chr7A_2837 -------------------------------------------------- chr7A_2837 GCAGTCATCGCTGGCCAGGAATGTTGTAAAGCGTGTGGTGGGCAGCACTG chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TACCAGTTCTAGATGGTGAGGCTTTGTCGATGAGGGTGCTTGTGGACCAC chr7D_1_TraesCS7D01G009700 TACCAGTTCTAGATGGTGAGGCTTTGTCGATGAGGGTGCTTGTGGACCAC chr4A_47 TACCAGTGCTAGATGGTGAGGCTTTGTCGATGAGGGTGCTTGTGGACCAC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 TTCCGGTGCTCAACGGAGAGGCCTTATCCGCTAGGATTCTTGTGGATCAT chr7D_2837 -------------------------------------------------- chr4A_2837 TTCCGGTGCTCAACGGAGAGGCATTATCCGCCAGGATTCTTGTGGATCAT chr7A_2837 -------------------------------------------------- chr7A_2837 TTCCGGTGCTCAACGGAGAGGCCTTATCCGCTAGGATTCTTGTGGATCAT chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------S------------------------------------------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TCCATTGTGCAGAGCTTTGCGATGGGCGGGAGGTGCACAATGACATCACG chr7D_1_TraesCS7D01G009700 TCCATTGTGCAGAGCTTTGCGATGGGCGGGAGGTGCACAATGACATCACG chr4A_47 TCCATTGTGCAGAGCTTTGCGATGGGCGGGAGGTGCACAGTGACATCACG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 TCCATTGTGGAGAGCTTCGTTATGGGCGGGAGATTGACGGCGACGTCCCG chr7D_2837 -------------------------------------------------- chr4A_2837 TCCATTGTGGAGAGCTTCGTTATGGGTGGGAGATTGACGGTGACGTCACG chr7A_2837 -------------------------------------------------- chr7A_2837 TCCATTGTGGAGAGCTTCGTTATGGGCGGGAGATTGACGGCGACGTCCCG chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ---------------------------------------S---------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 GGTGTATCCGACGGAGGCGATCTATGAGGCGGCAGGGGTGTACCTGTTCA chr7D_1_TraesCS7D01G009700 GGTGTATCCGACGGAGGCGATCTATGAGGCGGCAGGGGTGTACCTGTTCA chr4A_47 GGTGTATCCTATGGAGGCGATCTATGAGGCGGCAGGGGTGTACCTGTTCA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 AGTGTACCCGACTGAGGCCATCTATGAGGCGGCTGGGCTGTACGTTTTCA chr7D_2837 -------------------------------------------------- chr4A_2837 GGTGTACCCGACTGAGGCCATCTATGAGGCGGCAGGGGTGTACGTTTTCA chr7A_2837 -------------------------------------------------- chr7A_2837 AGTGTACCCGACTGAGGCCATCTATGAGGCGGCTGGGCTGTACGTTTTCA chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 ATAATGGCACCAACAGTAGTGTGGTGGCGGAAAGACTTGTCGTGCACGAG chr7D_1_TraesCS7D01G009700 ATAATGGCACCAACAGTAGTGTGGTGGCGGAAAGACTTGTCGTGCACGAG chr4A_47 ACAATGCCACCAACAGCAGTGTGATGGCGGAAAGACTTGTCGTGCACGAG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 ACAATG-------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 ACAATG-------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 ACAATG-------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -S----S---------S------S-------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 ----------------TAGTGTGGTGGCGGAAAGAC-------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 ATGGACTCCGCACCCAACAAGATCATCACGGATGATAAATATTTGCATTT chr7D_1_TraesCS7D01G009700 ATGGACTCCGCACCCAACAAGATCATCACGGATGATAAATATTTGCATTT chr4A_47 ATGGACTCCGCACCCAACGAGATCATCACGGATGATAAATATTTGCATTT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ------------------S------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 TGAATGA------------------------------------------- chr7D_1_TraesCS7D01G009700 TGAATGAAGATCTTGTGTGCCAACAGTGACCACCAAAGTGTTAGATCAAA chr4A_47 TGAATGAAGATCTTGTGTACCAACAGTGACCACCAAAGTATTGGATCAAA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ------------------S--------------------S--S------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 GAATCCCAACAGGGAAGGATAAGACATATCCAAATAATTTTACACGCCCT chr4A_47 GAATCC---CAGGGAAGGATAAGACATATCCAAATAATTTTACACGCCCT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ------SSS----------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 CGTCGGGGCTGAAACATGTACCATTGGACTATTTTGTTTTCCATTCATGA chr4A_47 CGTCGGGGCTGAAACATGTAC-ATTGGACTATTTTGTTTTCCATTCATGA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ---------------------S---------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 CACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_47 CACTTTGAACAATAAATATCCCTCGATATCTGGTTATTGAGGTCATCCAG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_47 TTTTTTGGGGGGCGGGAAAAAGGGATAAATAGCTAGTAGTAGTGCGGGTG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_47 CCCACGCTACTACTACGGCACTATAGCTAATTGTTAGTAGTAGCGTTGGT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_47 GCCACCCGTGCTAATACTACGTCTGTTAGTAGTAGCGCGGGTGCCACCCG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_47 CGCTACTACTAATTATCTTTAGCGGGTTTTATACCCGACGCTACTACTAT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_47 TACTTTCAAAAACAAAAAAATCTCGATCCCATGCGTGCTGTCAATGGCAG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_47 CAGTGGTTCGATCCAGCGACGGTTGGGGTCGCCGGAGGCATGAACAGGCA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_47 GCGGCAGACCAGATCCGACGGTGGCTGTTGGAGAGGGCCCGCTTCTATGG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr4A_47 AAGAGCAAGGTAGCAGCATGGGGCTCCTCTTCCCGACCATGCCAGATAGC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 NNNNNNNNNNNNNNNNNNGAATTTTTGCTTTC------------------ chr4A_47 TCCTGGTCGTCCATGGCGACGACCTGCACGGGCATGGACATGGGAGGGTG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs SSSSSSSSSSSSSSSSSSSSSSSS-SSSSSSS------------------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 AGTCAAACTAGAGGGAGAGAGAGAAAAAGAAAACCAAGGGAGAGAGGAAG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 GAGATGGAGGGACCAGCAGGGCTGGTCACCGGTGGTGAGGTACTCCGGCA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 TTGTGGTGCGAGGCGGCGGCCTCCTAGACGCCGACGGAAGACCGGCGAGC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 TCCTAGACGCCGGTGGCGCGAGGAGGCGGCCTCTTTCGGTGCCATGGAGG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 AGGACGGGCGCATGGGCAAGAGGTCCATGTGAGAGCGTATGGAGAGAGAG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 AGAGGAGAAAGTGGCGGAAGAGAGGAGGGATTTGGGGGAGGAGATGGGGA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 TTTCAGGGCTGTTAAAAACACTGTACTTAGTGGTAGAGAGGGGTATAAAC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 CCGCGCTACTACTATCAACTTAGTAGTAGCGCGGGTTTATACCCCTTGCT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 ACTACTATGGCATTGTCCCGGGGGCATAGTATAGACCACTTAGTAGTATC chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 GAGGGTTATAAACCCGCGCTACTAGTAAGTGGCAGTAGCGAGGGGTATAA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 GCGCGCGCTACTAGTAAGCGTCTACCTATAAGCTTTTCCCTAGTAGTGGG chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 AGCGGGGCGATTTCGCAGATCCCTAGAACCATCACCAATAATCCATTTTA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 TTCTATGTCTATATATTTGTGTAAACACTATGAATACTTAAATTTCACAT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 CACCATTATTCAGAATAGTATGTTACTACTTTCAACAAGTAGACATCAAT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 TCAAATACACATTTCCCGAGTTTAAATTTTAGGAAAAAATCTATATCAAA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 CAGGTGACATATAGTTTAAATAAAATATACAGCTCAAACATACAACATCA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 CCCACTCCTATTCCCACTTCCACTCNNNNNNNNNNNNNNNNNNNNNNNNN chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 -------------------------------------------------- chr4A_47 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 ---------------------------------------------GCCAA chr4A_47 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCAA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 CTCCAAATACTTCATTTGCCTTGCTACAAGCCCAATTAGGTTCATGAACA chr4A_47 CTCCAAATACTTCATTTGCCTTGTAACAAGCCCAATTGGGTTCATGAACA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -----------------------SS------------S------------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 TGATATTGAATTCTTGCACCATCTTCTTAGCCTTCACTTCATATCCAAAA chr4A_47 TGATATTGAATTCTTGCACCATCTTCTTAGCCTTCACTTCATCTCCAAAA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ------------------------------------------S------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 GACTTTCAACTTCTCTTCTTCAATTGTTGTCTTGCACTCCTCGCATTCTA chr4A_47 TACTTTTAACTTCTCTTCTTCAATTGTCGTCTTGCAGTCCTCACATTCTA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs S-----S--------------------S--------S-----S------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 ---------------------------TGTCTTGCACTCCTCGCATT--- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 CCTTGTGCTTCTCCACAACCTTGACCTCCAACTACCTTGCTTCCTTATCT chr4A_47 CCTTGTGCTTCTCCACAACCTTGACCTCCAACTACCTTGCTTCCTTATCT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -----------------------ACCCAAAACGCCCTTAATTACTTAACA chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 TGTTTTCTCTCTGCCTCCAACTCCTATATTGCTATTATCTCTTCGACCGA chr4A_47 TATTTTCTCTCTGCCTCCAACTCCTATATTGCTATTATCTCTTTGACCGA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 TACTACTGAAAATC------------------------------------ chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs -S-----------------------------------------S------ forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 CGTCTTGAAGAAACTCCATTCTTTTGATTATACTTCTCACCCACCTCACA chr4A_47 TGTCTTGAAGAAACTCCATTCTTTTGATTATACTTCTCACCCACCTCACA chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs S------------------------------------------------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------------------------------------- chr7D_1_TraesCS7D01G009700 GGCGACCCCTTTTTGATATTGGTGACCACCGATTAGCTCTGAGTACCACT chr4A_47 GGCGGCCCCCTTTTGATATTGATGACCACCGATTAGCTCTGA-TACCACT chr7D_1029 -------------------------------------------------- chr7A_1029 -------------------------------------------------- chr4A_1141 -------------------------------------------------- chr7D_1576 -------------------------------------------------- chr6D_1576 -------------------------------------------------- chr6B_1576 -------------------------------------------------- chr5A_1576 -------------------------------------------------- chr5D_1576 -------------------------------------------------- chr3A_1576 -------------------------------------------------- chr5D_1579 -------------------------------------------------- chr1A_1581 -------------------------------------------------- chr5B_1610 -------------------------------------------------- chr7B_1649 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr7D_2837 -------------------------------------------------- chr4A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr7A_2837 -------------------------------------------------- chr6B_4008 -------------------------------------------------- chr6D_4013 -------------------------------------------------- chr2B_4014 -------------------------------------------------- chr7D_4015 -------------------------------------------------- chr2D_4015 -------------------------------------------------- chr7D_4016 -------------------------------------------------- chr5A_4022 -------------------------------------------------- chr3B_4306 -------------------------------------------------- chr3D_4313 -------------------------------------------------- chr3D_4326 -------------------------------------------------- chr6B_4348 -------------------------------------------------- chr1D_4363 -------------------------------------------------- chr2D_4391 -------------------------------------------------- SNPs ----S----S-----------S--------------------S------- forward_485 -------------------------------------------------- reverse_4094 -------------------------------------------------- forward_525 -------------------------------------------------- reverse_4861 -------------------------------------------------- forward_3611 -------------------------------------------------- reverse_5634 -------------------------------------------------- forward_5407 -------------------------------------------------- reverse_7206 -------------------------------------------------- forward_6256 -------------------------------------------------- reverse_8147 -------------------------------------------------- forward_7232 -------------------------------------------------- reverse_9217 -------------------------------------------------- forward_7242 -------------------------------------------------- reverse_9440 -------------------------------------------------- forward_9379 -------------------------------------------------- reverse_11467 -------------------------------------------------- forward_11152 -------------------------------------------------- reverse_13378 -------------------------------------------------- input_sequence_1610 -------------------- chr7D_1_TraesCS7D01G009700 TCGGCCTTCCCCTTCATCAT chr4A_47 TTGGCCTTCCCCTTCATCAT chr7D_1029 -------------------- chr7A_1029 -------------------- chr4A_1141 -------------------- chr7D_1576 -------------------- chr6D_1576 -------------------- chr6B_1576 -------------------- chr5A_1576 -------------------- chr5D_1576 -------------------- chr3A_1576 -------------------- chr5D_1579 -------------------- chr1A_1581 -------------------- chr5B_1610 -------------------- chr7B_1649 -------------------- chr7D_2837 -------------------- chr7D_2837 -------------------- chr4A_2837 -------------------- chr7A_2837 -------------------- chr7A_2837 -------------------- chr6B_4008 -------------------- chr6D_4013 -------------------- chr2B_4014 -------------------- chr7D_4015 -------------------- chr2D_4015 -------------------- chr7D_4016 -------------------- chr5A_4022 -------------------- chr3B_4306 -------------------- chr3D_4313 -------------------- chr3D_4326 -------------------- chr6B_4348 -------------------- chr1D_4363 -------------------- chr2D_4391 -------------------- SNPs -S------------------ forward_485 -------------------- reverse_4094 -------------------- forward_525 -------------------- reverse_4861 -------------------- forward_3611 -------------------- reverse_5634 -------------------- forward_5407 -------------------- reverse_7206 -------------------- forward_6256 -------------------- reverse_8147 -------------------- forward_7232 -------------------- reverse_9217 -------------------- forward_7242 -------------------- reverse_9440 -------------------- forward_9379 -------------------- reverse_11467 -------------------- forward_11152 -------------------- reverse_13378 --------------------