Multiple sequence alignment - TraesCS7D01G553700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G553700 chr7D 100.000 2357 0 0 1 2357 637696192 637693836 0.000000e+00 4353
1 TraesCS7D01G553700 chr7D 93.803 1307 43 8 659 1953 497560963 497562243 0.000000e+00 1930
2 TraesCS7D01G553700 chr7D 90.149 670 40 17 1 657 175353534 175354190 0.000000e+00 848
3 TraesCS7D01G553700 chr7D 97.487 199 5 0 658 856 485220841 485220643 8.070000e-90 340
4 TraesCS7D01G553700 chr7D 89.565 115 12 0 2149 2263 637581293 637581179 1.890000e-31 147
5 TraesCS7D01G553700 chr6D 94.609 1317 36 9 658 1965 142136636 142135346 0.000000e+00 2006
6 TraesCS7D01G553700 chr1D 94.423 1309 36 3 658 1954 60171760 60170477 0.000000e+00 1978
7 TraesCS7D01G553700 chr1D 93.859 1319 41 8 659 1965 411532217 411530927 0.000000e+00 1951
8 TraesCS7D01G553700 chr1D 93.850 1317 41 12 658 1960 247505702 247504412 0.000000e+00 1947
9 TraesCS7D01G553700 chr1D 93.389 1316 41 16 658 1955 451393342 451392055 0.000000e+00 1906
10 TraesCS7D01G553700 chr1D 93.497 1307 43 22 658 1952 205134641 205133365 0.000000e+00 1905
11 TraesCS7D01G553700 chr1D 81.998 1311 148 44 658 1943 491670251 491671498 0.000000e+00 1033
12 TraesCS7D01G553700 chr2D 94.288 1313 37 4 658 1957 73126816 73125529 0.000000e+00 1975
13 TraesCS7D01G553700 chr2D 93.541 1316 46 9 658 1960 621748858 621750147 0.000000e+00 1923
14 TraesCS7D01G553700 chr2D 94.059 1212 33 6 756 1954 36804621 36803436 0.000000e+00 1803
15 TraesCS7D01G553700 chr2D 90.698 430 15 12 658 1087 22824307 22823903 1.230000e-152 549
16 TraesCS7D01G553700 chr3D 93.956 1307 42 7 659 1953 584701335 584700054 0.000000e+00 1941
17 TraesCS7D01G553700 chr3D 93.942 1238 49 13 658 1895 564205126 564203915 0.000000e+00 1847
18 TraesCS7D01G553700 chr3D 94.920 1063 29 12 658 1720 613711326 613712363 0.000000e+00 1640
19 TraesCS7D01G553700 chrUn 92.890 1308 57 8 658 1954 63293231 63294513 0.000000e+00 1868
20 TraesCS7D01G553700 chrUn 92.584 1308 61 8 658 1954 63398968 63397686 0.000000e+00 1845
21 TraesCS7D01G553700 chrUn 92.490 1305 66 19 658 1960 347669083 347670357 0.000000e+00 1838
22 TraesCS7D01G553700 chrUn 89.071 183 9 7 1783 1954 319148537 319148719 1.420000e-52 217
23 TraesCS7D01G553700 chr7B 94.265 1238 44 12 658 1895 720163333 720162123 0.000000e+00 1868
24 TraesCS7D01G553700 chr7B 85.650 223 24 6 2137 2357 737108957 737108741 6.550000e-56 228
25 TraesCS7D01G553700 chr7B 85.650 223 24 6 2137 2357 737409588 737409372 6.550000e-56 228
26 TraesCS7D01G553700 chr7B 85.202 223 25 6 2137 2357 737807949 737807733 3.050000e-54 222
27 TraesCS7D01G553700 chr7B 84.753 223 26 6 2137 2357 738108574 738108358 1.420000e-52 217
28 TraesCS7D01G553700 chr1A 92.661 1308 57 6 658 1954 3977515 3978794 0.000000e+00 1847
29 TraesCS7D01G553700 chr1A 92.513 1309 56 12 659 1954 497343268 497341989 0.000000e+00 1836
30 TraesCS7D01G553700 chr3A 91.972 1308 68 10 659 1954 738099172 738100454 0.000000e+00 1799
31 TraesCS7D01G553700 chr3A 91.018 668 37 13 1 658 125831138 125831792 0.000000e+00 880
32 TraesCS7D01G553700 chr4D 91.429 665 29 15 1 657 156547859 156547215 0.000000e+00 887
33 TraesCS7D01G553700 chr6A 90.149 670 45 11 1 657 426630281 426629620 0.000000e+00 852
34 TraesCS7D01G553700 chr6A 89.955 667 48 12 1 656 20868170 20868828 0.000000e+00 843
35 TraesCS7D01G553700 chr4A 90.015 671 45 11 1 657 616999093 616998431 0.000000e+00 848
36 TraesCS7D01G553700 chr2A 90.030 662 48 12 3 657 469639136 469638486 0.000000e+00 841
37 TraesCS7D01G553700 chr5A 89.608 664 45 13 1 657 495355678 495356324 0.000000e+00 822
38 TraesCS7D01G553700 chr7A 88.872 665 57 14 1 657 732857205 732857860 0.000000e+00 802
39 TraesCS7D01G553700 chr7A 92.424 396 25 4 1964 2357 728410486 728410878 5.690000e-156 560


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G553700 chr7D 637693836 637696192 2356 True 4353 4353 100.000 1 2357 1 chr7D.!!$R3 2356
1 TraesCS7D01G553700 chr7D 497560963 497562243 1280 False 1930 1930 93.803 659 1953 1 chr7D.!!$F2 1294
2 TraesCS7D01G553700 chr7D 175353534 175354190 656 False 848 848 90.149 1 657 1 chr7D.!!$F1 656
3 TraesCS7D01G553700 chr6D 142135346 142136636 1290 True 2006 2006 94.609 658 1965 1 chr6D.!!$R1 1307
4 TraesCS7D01G553700 chr1D 60170477 60171760 1283 True 1978 1978 94.423 658 1954 1 chr1D.!!$R1 1296
5 TraesCS7D01G553700 chr1D 411530927 411532217 1290 True 1951 1951 93.859 659 1965 1 chr1D.!!$R4 1306
6 TraesCS7D01G553700 chr1D 247504412 247505702 1290 True 1947 1947 93.850 658 1960 1 chr1D.!!$R3 1302
7 TraesCS7D01G553700 chr1D 451392055 451393342 1287 True 1906 1906 93.389 658 1955 1 chr1D.!!$R5 1297
8 TraesCS7D01G553700 chr1D 205133365 205134641 1276 True 1905 1905 93.497 658 1952 1 chr1D.!!$R2 1294
9 TraesCS7D01G553700 chr1D 491670251 491671498 1247 False 1033 1033 81.998 658 1943 1 chr1D.!!$F1 1285
10 TraesCS7D01G553700 chr2D 73125529 73126816 1287 True 1975 1975 94.288 658 1957 1 chr2D.!!$R3 1299
11 TraesCS7D01G553700 chr2D 621748858 621750147 1289 False 1923 1923 93.541 658 1960 1 chr2D.!!$F1 1302
12 TraesCS7D01G553700 chr2D 36803436 36804621 1185 True 1803 1803 94.059 756 1954 1 chr2D.!!$R2 1198
13 TraesCS7D01G553700 chr3D 584700054 584701335 1281 True 1941 1941 93.956 659 1953 1 chr3D.!!$R2 1294
14 TraesCS7D01G553700 chr3D 564203915 564205126 1211 True 1847 1847 93.942 658 1895 1 chr3D.!!$R1 1237
15 TraesCS7D01G553700 chr3D 613711326 613712363 1037 False 1640 1640 94.920 658 1720 1 chr3D.!!$F1 1062
16 TraesCS7D01G553700 chrUn 63293231 63294513 1282 False 1868 1868 92.890 658 1954 1 chrUn.!!$F1 1296
17 TraesCS7D01G553700 chrUn 63397686 63398968 1282 True 1845 1845 92.584 658 1954 1 chrUn.!!$R1 1296
18 TraesCS7D01G553700 chrUn 347669083 347670357 1274 False 1838 1838 92.490 658 1960 1 chrUn.!!$F3 1302
19 TraesCS7D01G553700 chr7B 720162123 720163333 1210 True 1868 1868 94.265 658 1895 1 chr7B.!!$R1 1237
20 TraesCS7D01G553700 chr1A 3977515 3978794 1279 False 1847 1847 92.661 658 1954 1 chr1A.!!$F1 1296
21 TraesCS7D01G553700 chr1A 497341989 497343268 1279 True 1836 1836 92.513 659 1954 1 chr1A.!!$R1 1295
22 TraesCS7D01G553700 chr3A 738099172 738100454 1282 False 1799 1799 91.972 659 1954 1 chr3A.!!$F2 1295
23 TraesCS7D01G553700 chr3A 125831138 125831792 654 False 880 880 91.018 1 658 1 chr3A.!!$F1 657
24 TraesCS7D01G553700 chr4D 156547215 156547859 644 True 887 887 91.429 1 657 1 chr4D.!!$R1 656
25 TraesCS7D01G553700 chr6A 426629620 426630281 661 True 852 852 90.149 1 657 1 chr6A.!!$R1 656
26 TraesCS7D01G553700 chr6A 20868170 20868828 658 False 843 843 89.955 1 656 1 chr6A.!!$F1 655
27 TraesCS7D01G553700 chr4A 616998431 616999093 662 True 848 848 90.015 1 657 1 chr4A.!!$R1 656
28 TraesCS7D01G553700 chr2A 469638486 469639136 650 True 841 841 90.030 3 657 1 chr2A.!!$R1 654
29 TraesCS7D01G553700 chr5A 495355678 495356324 646 False 822 822 89.608 1 657 1 chr5A.!!$F1 656
30 TraesCS7D01G553700 chr7A 732857205 732857860 655 False 802 802 88.872 1 657 1 chr7A.!!$F2 656

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
852 925 0.036875 GCCCCATCCTAGCCACATAC 59.963 60.0 0.0 0.0 0.0 2.39 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2186 2302 0.034186 TAGGGCGACTAGGGTTTCGA 60.034 55.0 4.79 0.0 37.43 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 4.360951 TTCCCTAAATGACACTTCCGTT 57.639 40.909 0.00 0.00 0.00 4.44
53 54 6.324819 CGTTCATTTTGAGCCTAAATGACAT 58.675 36.000 17.44 0.00 46.19 3.06
277 317 4.678269 CTGCTGCTGCGTGTGTGC 62.678 66.667 11.21 0.00 43.34 4.57
381 442 2.099254 CACGTGCGTGTTGTTGCA 59.901 55.556 15.60 0.00 40.91 4.08
483 556 2.519302 GCGCTATTGGCCCCACAT 60.519 61.111 0.00 0.00 37.74 3.21
521 594 3.375642 GCAAAAGAGTCTTTTCAGGTGC 58.624 45.455 24.77 21.36 0.00 5.01
602 675 9.378551 GTGTCAAATAGGGAAGAAAAACTTTTT 57.621 29.630 0.00 0.00 39.13 1.94
603 676 9.594478 TGTCAAATAGGGAAGAAAAACTTTTTC 57.406 29.630 16.27 16.27 39.13 2.29
604 677 9.594478 GTCAAATAGGGAAGAAAAACTTTTTCA 57.406 29.630 23.02 7.16 39.13 2.69
605 678 9.816354 TCAAATAGGGAAGAAAAACTTTTTCAG 57.184 29.630 23.02 5.71 39.13 3.02
606 679 9.599866 CAAATAGGGAAGAAAAACTTTTTCAGT 57.400 29.630 23.02 13.60 39.13 3.41
607 680 9.599866 AAATAGGGAAGAAAAACTTTTTCAGTG 57.400 29.630 23.02 0.00 39.13 3.66
608 681 6.605471 AGGGAAGAAAAACTTTTTCAGTGT 57.395 33.333 23.02 9.71 39.13 3.55
609 682 6.631016 AGGGAAGAAAAACTTTTTCAGTGTC 58.369 36.000 23.02 15.49 39.13 3.67
610 683 6.210584 AGGGAAGAAAAACTTTTTCAGTGTCA 59.789 34.615 23.02 0.00 39.13 3.58
611 684 6.871492 GGGAAGAAAAACTTTTTCAGTGTCAA 59.129 34.615 23.02 0.00 39.13 3.18
612 685 7.386573 GGGAAGAAAAACTTTTTCAGTGTCAAA 59.613 33.333 23.02 0.00 39.13 2.69
613 686 8.935844 GGAAGAAAAACTTTTTCAGTGTCAAAT 58.064 29.630 23.02 2.88 39.13 2.32
614 687 9.745323 GAAGAAAAACTTTTTCAGTGTCAAATG 57.255 29.630 23.02 0.00 39.13 2.32
615 688 9.487790 AAGAAAAACTTTTTCAGTGTCAAATGA 57.512 25.926 23.02 0.00 35.12 2.57
616 689 9.143631 AGAAAAACTTTTTCAGTGTCAAATGAG 57.856 29.630 23.02 1.55 35.12 2.90
617 690 7.832503 AAAACTTTTTCAGTGTCAAATGAGG 57.167 32.000 9.09 0.00 35.12 3.86
618 691 6.773976 AACTTTTTCAGTGTCAAATGAGGA 57.226 33.333 9.09 0.00 35.12 3.71
619 692 6.773976 ACTTTTTCAGTGTCAAATGAGGAA 57.226 33.333 9.09 0.00 32.83 3.36
620 693 6.799512 ACTTTTTCAGTGTCAAATGAGGAAG 58.200 36.000 9.09 9.69 32.83 3.46
621 694 4.836125 TTTCAGTGTCAAATGAGGAAGC 57.164 40.909 0.00 0.00 0.00 3.86
622 695 3.490439 TCAGTGTCAAATGAGGAAGCA 57.510 42.857 0.00 0.00 0.00 3.91
623 696 4.025040 TCAGTGTCAAATGAGGAAGCAT 57.975 40.909 0.00 0.00 0.00 3.79
624 697 5.164620 TCAGTGTCAAATGAGGAAGCATA 57.835 39.130 0.00 0.00 0.00 3.14
625 698 5.748402 TCAGTGTCAAATGAGGAAGCATAT 58.252 37.500 0.00 0.00 0.00 1.78
626 699 6.182627 TCAGTGTCAAATGAGGAAGCATATT 58.817 36.000 0.00 0.00 0.00 1.28
627 700 6.660521 TCAGTGTCAAATGAGGAAGCATATTT 59.339 34.615 0.00 0.00 0.00 1.40
628 701 7.177216 TCAGTGTCAAATGAGGAAGCATATTTT 59.823 33.333 0.00 0.00 0.00 1.82
629 702 8.461222 CAGTGTCAAATGAGGAAGCATATTTTA 58.539 33.333 0.00 0.00 0.00 1.52
630 703 9.023962 AGTGTCAAATGAGGAAGCATATTTTAA 57.976 29.630 0.00 0.00 0.00 1.52
631 704 9.294030 GTGTCAAATGAGGAAGCATATTTTAAG 57.706 33.333 0.00 0.00 0.00 1.85
632 705 9.241919 TGTCAAATGAGGAAGCATATTTTAAGA 57.758 29.630 0.00 0.00 0.00 2.10
639 712 9.547753 TGAGGAAGCATATTTTAAGATAGTGTC 57.452 33.333 0.00 0.00 0.00 3.67
640 713 9.547753 GAGGAAGCATATTTTAAGATAGTGTCA 57.452 33.333 0.00 0.00 0.00 3.58
641 714 9.905713 AGGAAGCATATTTTAAGATAGTGTCAA 57.094 29.630 0.00 0.00 0.00 3.18
834 907 2.744202 CCTAACATCTAATGCCGGATGC 59.256 50.000 5.05 0.00 41.93 3.91
835 908 1.609208 AACATCTAATGCCGGATGCC 58.391 50.000 5.05 0.00 41.93 4.40
836 909 0.250901 ACATCTAATGCCGGATGCCC 60.251 55.000 5.05 0.00 41.93 5.36
837 910 0.962356 CATCTAATGCCGGATGCCCC 60.962 60.000 5.05 0.00 40.16 5.80
838 911 1.426251 ATCTAATGCCGGATGCCCCA 61.426 55.000 5.05 0.00 40.16 4.96
839 912 1.075482 CTAATGCCGGATGCCCCAT 59.925 57.895 5.05 0.00 40.16 4.00
840 913 0.962356 CTAATGCCGGATGCCCCATC 60.962 60.000 5.05 0.00 39.87 3.51
847 920 3.580084 GATGCCCCATCCTAGCCA 58.420 61.111 0.00 0.00 35.07 4.75
848 921 1.073897 GATGCCCCATCCTAGCCAC 59.926 63.158 0.00 0.00 35.07 5.01
849 922 1.697394 ATGCCCCATCCTAGCCACA 60.697 57.895 0.00 0.00 0.00 4.17
850 923 1.070127 ATGCCCCATCCTAGCCACAT 61.070 55.000 0.00 0.00 0.00 3.21
851 924 0.401250 TGCCCCATCCTAGCCACATA 60.401 55.000 0.00 0.00 0.00 2.29
852 925 0.036875 GCCCCATCCTAGCCACATAC 59.963 60.000 0.00 0.00 0.00 2.39
853 926 0.693049 CCCCATCCTAGCCACATACC 59.307 60.000 0.00 0.00 0.00 2.73
854 927 0.321671 CCCATCCTAGCCACATACCG 59.678 60.000 0.00 0.00 0.00 4.02
855 928 0.321671 CCATCCTAGCCACATACCGG 59.678 60.000 0.00 0.00 0.00 5.28
856 929 1.338107 CATCCTAGCCACATACCGGA 58.662 55.000 9.46 0.00 0.00 5.14
857 930 1.902508 CATCCTAGCCACATACCGGAT 59.097 52.381 9.46 0.00 0.00 4.18
858 931 1.338107 TCCTAGCCACATACCGGATG 58.662 55.000 9.46 10.51 41.79 3.51
1017 1091 3.709633 ATGGCGCCAGACAGCTCA 61.710 61.111 35.36 7.66 39.80 4.26
1351 1439 0.108945 CAGGAAGGGTAACGACGTCC 60.109 60.000 10.58 0.00 37.60 4.79
1898 2012 2.123640 GAGGAGGGGGAGAGTCGG 60.124 72.222 0.00 0.00 0.00 4.79
1968 2084 4.807039 GCGGGTGCGTCGGTACAT 62.807 66.667 0.00 0.00 0.00 2.29
1969 2085 2.883730 CGGGTGCGTCGGTACATG 60.884 66.667 0.00 0.00 0.00 3.21
1970 2086 3.192922 GGGTGCGTCGGTACATGC 61.193 66.667 0.00 0.00 0.00 4.06
1971 2087 3.192922 GGTGCGTCGGTACATGCC 61.193 66.667 0.00 0.00 0.00 4.40
1972 2088 2.433491 GTGCGTCGGTACATGCCA 60.433 61.111 0.00 0.00 0.00 4.92
1973 2089 1.813753 GTGCGTCGGTACATGCCAT 60.814 57.895 0.00 0.00 0.00 4.40
1974 2090 1.078778 TGCGTCGGTACATGCCATT 60.079 52.632 0.00 0.00 0.00 3.16
1975 2091 0.175989 TGCGTCGGTACATGCCATTA 59.824 50.000 0.00 0.00 0.00 1.90
1976 2092 1.292061 GCGTCGGTACATGCCATTAA 58.708 50.000 0.00 0.00 0.00 1.40
1977 2093 1.260561 GCGTCGGTACATGCCATTAAG 59.739 52.381 0.00 0.00 0.00 1.85
1978 2094 2.816689 CGTCGGTACATGCCATTAAGA 58.183 47.619 0.00 0.00 0.00 2.10
1979 2095 3.390135 CGTCGGTACATGCCATTAAGAT 58.610 45.455 0.00 0.00 0.00 2.40
1980 2096 3.807622 CGTCGGTACATGCCATTAAGATT 59.192 43.478 0.00 0.00 0.00 2.40
1981 2097 4.272504 CGTCGGTACATGCCATTAAGATTT 59.727 41.667 0.00 0.00 0.00 2.17
1982 2098 5.510671 GTCGGTACATGCCATTAAGATTTG 58.489 41.667 0.00 0.00 0.00 2.32
1983 2099 4.578516 TCGGTACATGCCATTAAGATTTGG 59.421 41.667 0.00 0.00 36.03 3.28
1984 2100 4.578516 CGGTACATGCCATTAAGATTTGGA 59.421 41.667 0.00 0.00 34.81 3.53
1985 2101 5.241506 CGGTACATGCCATTAAGATTTGGAT 59.758 40.000 0.00 0.00 34.81 3.41
1986 2102 6.429692 CGGTACATGCCATTAAGATTTGGATA 59.570 38.462 0.00 0.00 34.81 2.59
1987 2103 7.573096 CGGTACATGCCATTAAGATTTGGATAC 60.573 40.741 0.00 0.00 34.81 2.24
2001 2117 3.354948 TGGATACATCAAGCAAGCACT 57.645 42.857 0.00 0.00 46.17 4.40
2002 2118 3.011818 TGGATACATCAAGCAAGCACTG 58.988 45.455 0.00 0.00 46.17 3.66
2003 2119 3.273434 GGATACATCAAGCAAGCACTGA 58.727 45.455 0.00 0.00 0.00 3.41
2004 2120 3.691118 GGATACATCAAGCAAGCACTGAA 59.309 43.478 0.00 0.00 0.00 3.02
2005 2121 4.437930 GGATACATCAAGCAAGCACTGAAC 60.438 45.833 0.00 0.00 0.00 3.18
2006 2122 2.300433 ACATCAAGCAAGCACTGAACA 58.700 42.857 0.00 0.00 0.00 3.18
2007 2123 2.033801 ACATCAAGCAAGCACTGAACAC 59.966 45.455 0.00 0.00 0.00 3.32
2008 2124 2.042686 TCAAGCAAGCACTGAACACT 57.957 45.000 0.00 0.00 0.00 3.55
2009 2125 1.672363 TCAAGCAAGCACTGAACACTG 59.328 47.619 0.00 0.00 0.00 3.66
2010 2126 1.672363 CAAGCAAGCACTGAACACTGA 59.328 47.619 0.00 0.00 0.00 3.41
2011 2127 2.042686 AGCAAGCACTGAACACTGAA 57.957 45.000 0.00 0.00 0.00 3.02
2012 2128 1.672881 AGCAAGCACTGAACACTGAAC 59.327 47.619 0.00 0.00 0.00 3.18
2013 2129 1.672881 GCAAGCACTGAACACTGAACT 59.327 47.619 0.00 0.00 0.00 3.01
2014 2130 2.098117 GCAAGCACTGAACACTGAACTT 59.902 45.455 0.00 0.00 0.00 2.66
2015 2131 3.790123 GCAAGCACTGAACACTGAACTTC 60.790 47.826 0.00 0.00 0.00 3.01
2016 2132 3.266510 AGCACTGAACACTGAACTTCA 57.733 42.857 0.00 0.00 0.00 3.02
2017 2133 2.939103 AGCACTGAACACTGAACTTCAC 59.061 45.455 0.00 0.00 0.00 3.18
2018 2134 2.939103 GCACTGAACACTGAACTTCACT 59.061 45.455 0.00 0.00 0.00 3.41
2019 2135 3.375299 GCACTGAACACTGAACTTCACTT 59.625 43.478 0.00 0.00 0.00 3.16
2020 2136 4.570772 GCACTGAACACTGAACTTCACTTA 59.429 41.667 0.00 0.00 0.00 2.24
2021 2137 5.064707 GCACTGAACACTGAACTTCACTTAA 59.935 40.000 0.00 0.00 0.00 1.85
2022 2138 6.403200 GCACTGAACACTGAACTTCACTTAAA 60.403 38.462 0.00 0.00 0.00 1.52
2023 2139 7.679638 GCACTGAACACTGAACTTCACTTAAAT 60.680 37.037 0.00 0.00 0.00 1.40
2024 2140 7.852945 CACTGAACACTGAACTTCACTTAAATC 59.147 37.037 0.00 0.00 0.00 2.17
2025 2141 7.012421 ACTGAACACTGAACTTCACTTAAATCC 59.988 37.037 0.00 0.00 0.00 3.01
2026 2142 5.924475 ACACTGAACTTCACTTAAATCCG 57.076 39.130 0.00 0.00 0.00 4.18
2027 2143 5.607477 ACACTGAACTTCACTTAAATCCGA 58.393 37.500 0.00 0.00 0.00 4.55
2028 2144 6.231211 ACACTGAACTTCACTTAAATCCGAT 58.769 36.000 0.00 0.00 0.00 4.18
2029 2145 6.710744 ACACTGAACTTCACTTAAATCCGATT 59.289 34.615 0.00 0.00 0.00 3.34
2030 2146 7.228706 ACACTGAACTTCACTTAAATCCGATTT 59.771 33.333 11.09 11.09 36.29 2.17
2031 2147 7.746475 CACTGAACTTCACTTAAATCCGATTTC 59.254 37.037 9.67 0.00 33.82 2.17
2032 2148 6.827641 TGAACTTCACTTAAATCCGATTTCG 58.172 36.000 9.67 5.74 39.44 3.46
2033 2149 6.425721 TGAACTTCACTTAAATCCGATTTCGT 59.574 34.615 9.67 6.32 37.74 3.85
2034 2150 7.599621 TGAACTTCACTTAAATCCGATTTCGTA 59.400 33.333 9.67 0.00 37.74 3.43
2035 2151 7.287050 ACTTCACTTAAATCCGATTTCGTAC 57.713 36.000 9.67 0.00 37.74 3.67
2036 2152 5.937165 TCACTTAAATCCGATTTCGTACG 57.063 39.130 9.53 9.53 37.74 3.67
2037 2153 5.639757 TCACTTAAATCCGATTTCGTACGA 58.360 37.500 15.28 15.28 37.74 3.43
2038 2154 5.512788 TCACTTAAATCCGATTTCGTACGAC 59.487 40.000 19.36 5.83 37.74 4.34
2039 2155 4.800471 ACTTAAATCCGATTTCGTACGACC 59.200 41.667 19.36 9.31 37.74 4.79
2040 2156 2.945447 AATCCGATTTCGTACGACCA 57.055 45.000 19.36 8.23 37.74 4.02
2041 2157 2.199291 ATCCGATTTCGTACGACCAC 57.801 50.000 19.36 10.71 37.74 4.16
2042 2158 0.880441 TCCGATTTCGTACGACCACA 59.120 50.000 19.36 0.00 37.74 4.17
2043 2159 1.473677 TCCGATTTCGTACGACCACAT 59.526 47.619 19.36 7.78 37.74 3.21
2044 2160 1.850441 CCGATTTCGTACGACCACATC 59.150 52.381 19.36 15.04 37.74 3.06
2045 2161 2.521996 CGATTTCGTACGACCACATCA 58.478 47.619 19.36 0.00 34.11 3.07
2046 2162 2.278094 CGATTTCGTACGACCACATCAC 59.722 50.000 19.36 3.28 34.11 3.06
2047 2163 3.508762 GATTTCGTACGACCACATCACT 58.491 45.455 19.36 0.00 0.00 3.41
2048 2164 3.374220 TTTCGTACGACCACATCACTT 57.626 42.857 19.36 0.00 0.00 3.16
2049 2165 2.624316 TCGTACGACCACATCACTTC 57.376 50.000 15.28 0.00 0.00 3.01
2050 2166 1.200716 TCGTACGACCACATCACTTCC 59.799 52.381 15.28 0.00 0.00 3.46
2051 2167 1.201647 CGTACGACCACATCACTTCCT 59.798 52.381 10.44 0.00 0.00 3.36
2052 2168 2.421073 CGTACGACCACATCACTTCCTA 59.579 50.000 10.44 0.00 0.00 2.94
2053 2169 3.119743 CGTACGACCACATCACTTCCTAA 60.120 47.826 10.44 0.00 0.00 2.69
2054 2170 4.616604 CGTACGACCACATCACTTCCTAAA 60.617 45.833 10.44 0.00 0.00 1.85
2055 2171 3.926616 ACGACCACATCACTTCCTAAAG 58.073 45.455 0.00 0.00 38.54 1.85
2056 2172 2.673368 CGACCACATCACTTCCTAAAGC 59.327 50.000 0.00 0.00 35.81 3.51
2057 2173 3.010420 GACCACATCACTTCCTAAAGCC 58.990 50.000 0.00 0.00 35.81 4.35
2058 2174 2.644798 ACCACATCACTTCCTAAAGCCT 59.355 45.455 0.00 0.00 35.81 4.58
2059 2175 3.844211 ACCACATCACTTCCTAAAGCCTA 59.156 43.478 0.00 0.00 35.81 3.93
2060 2176 4.192317 CCACATCACTTCCTAAAGCCTAC 58.808 47.826 0.00 0.00 35.81 3.18
2061 2177 4.323485 CCACATCACTTCCTAAAGCCTACA 60.323 45.833 0.00 0.00 35.81 2.74
2062 2178 5.431765 CACATCACTTCCTAAAGCCTACAT 58.568 41.667 0.00 0.00 35.81 2.29
2063 2179 6.408092 CCACATCACTTCCTAAAGCCTACATA 60.408 42.308 0.00 0.00 35.81 2.29
2064 2180 6.480320 CACATCACTTCCTAAAGCCTACATAC 59.520 42.308 0.00 0.00 35.81 2.39
2065 2181 6.156256 ACATCACTTCCTAAAGCCTACATACA 59.844 38.462 0.00 0.00 35.81 2.29
2066 2182 5.974108 TCACTTCCTAAAGCCTACATACAC 58.026 41.667 0.00 0.00 35.81 2.90
2067 2183 5.105064 TCACTTCCTAAAGCCTACATACACC 60.105 44.000 0.00 0.00 35.81 4.16
2068 2184 4.781087 ACTTCCTAAAGCCTACATACACCA 59.219 41.667 0.00 0.00 35.81 4.17
2069 2185 4.748277 TCCTAAAGCCTACATACACCAC 57.252 45.455 0.00 0.00 0.00 4.16
2070 2186 4.359105 TCCTAAAGCCTACATACACCACT 58.641 43.478 0.00 0.00 0.00 4.00
2071 2187 5.521696 TCCTAAAGCCTACATACACCACTA 58.478 41.667 0.00 0.00 0.00 2.74
2072 2188 6.141083 TCCTAAAGCCTACATACACCACTAT 58.859 40.000 0.00 0.00 0.00 2.12
2073 2189 6.614087 TCCTAAAGCCTACATACACCACTATT 59.386 38.462 0.00 0.00 0.00 1.73
2074 2190 6.706270 CCTAAAGCCTACATACACCACTATTG 59.294 42.308 0.00 0.00 0.00 1.90
2075 2191 4.073293 AGCCTACATACACCACTATTGC 57.927 45.455 0.00 0.00 0.00 3.56
2076 2192 3.454447 AGCCTACATACACCACTATTGCA 59.546 43.478 0.00 0.00 0.00 4.08
2077 2193 4.080582 AGCCTACATACACCACTATTGCAA 60.081 41.667 0.00 0.00 0.00 4.08
2078 2194 4.035208 GCCTACATACACCACTATTGCAAC 59.965 45.833 0.00 0.00 0.00 4.17
2079 2195 5.182487 CCTACATACACCACTATTGCAACA 58.818 41.667 0.00 0.00 0.00 3.33
2080 2196 5.822519 CCTACATACACCACTATTGCAACAT 59.177 40.000 0.00 0.00 0.00 2.71
2081 2197 5.565592 ACATACACCACTATTGCAACATG 57.434 39.130 0.00 0.00 0.00 3.21
2082 2198 5.009631 ACATACACCACTATTGCAACATGT 58.990 37.500 0.00 0.00 0.00 3.21
2083 2199 6.176896 ACATACACCACTATTGCAACATGTA 58.823 36.000 0.00 5.12 0.00 2.29
2084 2200 6.093495 ACATACACCACTATTGCAACATGTAC 59.907 38.462 0.00 0.00 0.00 2.90
2085 2201 4.393834 ACACCACTATTGCAACATGTACA 58.606 39.130 0.00 0.00 0.00 2.90
2086 2202 4.824537 ACACCACTATTGCAACATGTACAA 59.175 37.500 14.52 14.52 0.00 2.41
2087 2203 5.153513 CACCACTATTGCAACATGTACAAC 58.846 41.667 14.48 0.00 0.00 3.32
2088 2204 4.824537 ACCACTATTGCAACATGTACAACA 59.175 37.500 14.48 4.70 0.00 3.33
2089 2205 5.300539 ACCACTATTGCAACATGTACAACAA 59.699 36.000 14.48 9.88 0.00 2.83
2090 2206 6.183360 ACCACTATTGCAACATGTACAACAAA 60.183 34.615 14.48 5.17 0.00 2.83
2091 2207 6.867816 CCACTATTGCAACATGTACAACAAAT 59.132 34.615 14.48 5.66 0.00 2.32
2092 2208 7.148771 CCACTATTGCAACATGTACAACAAATG 60.149 37.037 14.48 10.94 0.00 2.32
2093 2209 5.594724 ATTGCAACATGTACAACAAATGC 57.405 34.783 14.48 11.18 36.32 3.56
2094 2210 3.048501 TGCAACATGTACAACAAATGCG 58.951 40.909 0.00 0.00 37.62 4.73
2095 2211 2.159986 GCAACATGTACAACAAATGCGC 60.160 45.455 0.00 0.00 29.87 6.09
2096 2212 3.307674 CAACATGTACAACAAATGCGCT 58.692 40.909 9.73 0.00 0.00 5.92
2097 2213 2.932498 ACATGTACAACAAATGCGCTG 58.068 42.857 9.73 0.08 0.00 5.18
2098 2214 2.551887 ACATGTACAACAAATGCGCTGA 59.448 40.909 9.73 0.00 0.00 4.26
2099 2215 2.967459 TGTACAACAAATGCGCTGAG 57.033 45.000 9.73 0.00 0.00 3.35
2100 2216 2.488952 TGTACAACAAATGCGCTGAGA 58.511 42.857 9.73 0.00 0.00 3.27
2101 2217 2.480037 TGTACAACAAATGCGCTGAGAG 59.520 45.455 9.73 0.00 0.00 3.20
2102 2218 1.597742 ACAACAAATGCGCTGAGAGT 58.402 45.000 9.73 0.00 0.00 3.24
2103 2219 2.766313 ACAACAAATGCGCTGAGAGTA 58.234 42.857 9.73 0.00 0.00 2.59
2104 2220 2.480419 ACAACAAATGCGCTGAGAGTAC 59.520 45.455 9.73 0.00 0.00 2.73
2105 2221 2.738846 CAACAAATGCGCTGAGAGTACT 59.261 45.455 9.73 0.00 0.00 2.73
2106 2222 2.611518 ACAAATGCGCTGAGAGTACTC 58.388 47.619 15.41 15.41 42.88 2.59
2107 2223 1.929836 CAAATGCGCTGAGAGTACTCC 59.070 52.381 19.38 11.29 41.99 3.85
2108 2224 1.479709 AATGCGCTGAGAGTACTCCT 58.520 50.000 19.38 6.89 41.99 3.69
2109 2225 2.350057 ATGCGCTGAGAGTACTCCTA 57.650 50.000 19.38 7.80 41.99 2.94
2110 2226 1.380524 TGCGCTGAGAGTACTCCTAC 58.619 55.000 19.38 11.55 41.99 3.18
2111 2227 1.339727 TGCGCTGAGAGTACTCCTACA 60.340 52.381 19.38 15.15 41.99 2.74
2112 2228 1.743958 GCGCTGAGAGTACTCCTACAA 59.256 52.381 19.38 0.28 41.99 2.41
2113 2229 2.163815 GCGCTGAGAGTACTCCTACAAA 59.836 50.000 19.38 0.00 41.99 2.83
2114 2230 3.367087 GCGCTGAGAGTACTCCTACAAAA 60.367 47.826 19.38 0.00 41.99 2.44
2115 2231 4.806330 CGCTGAGAGTACTCCTACAAAAA 58.194 43.478 19.38 0.00 41.99 1.94
2139 2255 6.841443 AAATGAGCTCATTCATCTTAGTCG 57.159 37.500 35.67 0.00 45.06 4.18
2140 2256 5.781210 ATGAGCTCATTCATCTTAGTCGA 57.219 39.130 23.75 0.00 32.42 4.20
2141 2257 5.781210 TGAGCTCATTCATCTTAGTCGAT 57.219 39.130 13.74 0.00 0.00 3.59
2142 2258 5.767269 TGAGCTCATTCATCTTAGTCGATC 58.233 41.667 13.74 0.00 0.00 3.69
2143 2259 5.132897 AGCTCATTCATCTTAGTCGATCC 57.867 43.478 0.00 0.00 0.00 3.36
2144 2260 3.917380 GCTCATTCATCTTAGTCGATCCG 59.083 47.826 0.00 0.00 0.00 4.18
2145 2261 3.902150 TCATTCATCTTAGTCGATCCGC 58.098 45.455 0.00 0.00 0.00 5.54
2146 2262 2.795175 TTCATCTTAGTCGATCCGCC 57.205 50.000 0.00 0.00 0.00 6.13
2147 2263 1.687563 TCATCTTAGTCGATCCGCCA 58.312 50.000 0.00 0.00 0.00 5.69
2148 2264 1.337071 TCATCTTAGTCGATCCGCCAC 59.663 52.381 0.00 0.00 0.00 5.01
2149 2265 0.311165 ATCTTAGTCGATCCGCCACG 59.689 55.000 0.00 0.00 0.00 4.94
2150 2266 1.944676 CTTAGTCGATCCGCCACGC 60.945 63.158 0.00 0.00 0.00 5.34
2151 2267 3.420214 TTAGTCGATCCGCCACGCC 62.420 63.158 0.00 0.00 0.00 5.68
2156 2272 4.899239 GATCCGCCACGCCTCCTG 62.899 72.222 0.00 0.00 0.00 3.86
2160 2276 4.680237 CGCCACGCCTCCTGTCAA 62.680 66.667 0.00 0.00 0.00 3.18
2161 2277 2.743928 GCCACGCCTCCTGTCAAG 60.744 66.667 0.00 0.00 0.00 3.02
2162 2278 3.059982 CCACGCCTCCTGTCAAGA 58.940 61.111 0.00 0.00 0.00 3.02
2163 2279 1.599047 CCACGCCTCCTGTCAAGAT 59.401 57.895 0.00 0.00 0.00 2.40
2164 2280 0.460987 CCACGCCTCCTGTCAAGATC 60.461 60.000 0.00 0.00 0.00 2.75
2165 2281 0.247460 CACGCCTCCTGTCAAGATCA 59.753 55.000 0.00 0.00 0.00 2.92
2166 2282 0.976641 ACGCCTCCTGTCAAGATCAA 59.023 50.000 0.00 0.00 0.00 2.57
2167 2283 1.338200 ACGCCTCCTGTCAAGATCAAC 60.338 52.381 0.00 0.00 0.00 3.18
2168 2284 1.363744 GCCTCCTGTCAAGATCAACG 58.636 55.000 0.00 0.00 0.00 4.10
2169 2285 1.066858 GCCTCCTGTCAAGATCAACGA 60.067 52.381 0.00 0.00 0.00 3.85
2170 2286 2.886081 CCTCCTGTCAAGATCAACGAG 58.114 52.381 0.00 0.00 0.00 4.18
2171 2287 2.266554 CTCCTGTCAAGATCAACGAGC 58.733 52.381 0.00 0.00 0.00 5.03
2172 2288 1.066858 TCCTGTCAAGATCAACGAGCC 60.067 52.381 0.00 0.00 0.00 4.70
2173 2289 1.363744 CTGTCAAGATCAACGAGCCC 58.636 55.000 0.00 0.00 0.00 5.19
2174 2290 0.036388 TGTCAAGATCAACGAGCCCC 60.036 55.000 0.00 0.00 0.00 5.80
2175 2291 1.084370 GTCAAGATCAACGAGCCCCG 61.084 60.000 0.00 0.00 45.44 5.73
2176 2292 1.218047 CAAGATCAACGAGCCCCGA 59.782 57.895 2.99 0.00 41.76 5.14
2177 2293 0.179073 CAAGATCAACGAGCCCCGAT 60.179 55.000 2.99 0.00 41.76 4.18
2178 2294 0.179073 AAGATCAACGAGCCCCGATG 60.179 55.000 2.99 1.86 41.62 3.84
2180 2296 2.892640 TCAACGAGCCCCGATGAG 59.107 61.111 5.24 0.00 43.57 2.90
2181 2297 1.982395 TCAACGAGCCCCGATGAGT 60.982 57.895 5.24 0.00 43.57 3.41
2182 2298 1.519455 CAACGAGCCCCGATGAGTC 60.519 63.158 2.99 0.00 42.69 3.36
2183 2299 2.722201 AACGAGCCCCGATGAGTCC 61.722 63.158 2.99 0.00 41.76 3.85
2184 2300 3.917760 CGAGCCCCGATGAGTCCC 61.918 72.222 0.00 0.00 41.76 4.46
2185 2301 3.551407 GAGCCCCGATGAGTCCCC 61.551 72.222 0.00 0.00 0.00 4.81
2186 2302 4.095400 AGCCCCGATGAGTCCCCT 62.095 66.667 0.00 0.00 0.00 4.79
2187 2303 3.551407 GCCCCGATGAGTCCCCTC 61.551 72.222 0.00 0.00 38.27 4.30
2188 2304 3.227276 CCCCGATGAGTCCCCTCG 61.227 72.222 0.00 0.00 40.85 4.63
2189 2305 2.123854 CCCGATGAGTCCCCTCGA 60.124 66.667 8.05 0.00 40.85 4.04
2190 2306 1.756950 CCCGATGAGTCCCCTCGAA 60.757 63.158 8.05 0.00 40.85 3.71
2191 2307 1.327690 CCCGATGAGTCCCCTCGAAA 61.328 60.000 8.05 0.00 40.85 3.46
2192 2308 0.179108 CCGATGAGTCCCCTCGAAAC 60.179 60.000 8.05 0.00 40.85 2.78
2193 2309 0.179108 CGATGAGTCCCCTCGAAACC 60.179 60.000 1.78 0.00 40.85 3.27
2194 2310 0.178301 GATGAGTCCCCTCGAAACCC 59.822 60.000 0.00 0.00 40.85 4.11
2195 2311 0.252742 ATGAGTCCCCTCGAAACCCT 60.253 55.000 0.00 0.00 40.85 4.34
2196 2312 0.410663 TGAGTCCCCTCGAAACCCTA 59.589 55.000 0.00 0.00 40.85 3.53
2197 2313 1.112950 GAGTCCCCTCGAAACCCTAG 58.887 60.000 0.00 0.00 0.00 3.02
2198 2314 0.412640 AGTCCCCTCGAAACCCTAGT 59.587 55.000 0.00 0.00 0.00 2.57
2199 2315 0.822811 GTCCCCTCGAAACCCTAGTC 59.177 60.000 0.00 0.00 0.00 2.59
2200 2316 0.682209 TCCCCTCGAAACCCTAGTCG 60.682 60.000 0.00 0.00 38.62 4.18
2201 2317 1.141234 CCCTCGAAACCCTAGTCGC 59.859 63.158 0.00 0.00 37.19 5.19
2202 2318 1.141234 CCTCGAAACCCTAGTCGCC 59.859 63.158 0.00 0.00 37.19 5.54
2203 2319 1.141234 CTCGAAACCCTAGTCGCCC 59.859 63.158 0.00 0.00 37.19 6.13
2204 2320 1.304713 TCGAAACCCTAGTCGCCCT 60.305 57.895 0.00 0.00 37.19 5.19
2205 2321 0.034186 TCGAAACCCTAGTCGCCCTA 60.034 55.000 0.00 0.00 37.19 3.53
2206 2322 0.384669 CGAAACCCTAGTCGCCCTAG 59.615 60.000 2.87 2.87 42.51 3.02
2207 2323 0.104487 GAAACCCTAGTCGCCCTAGC 59.896 60.000 4.05 0.00 41.68 3.42
2208 2324 0.325390 AAACCCTAGTCGCCCTAGCT 60.325 55.000 0.00 0.00 41.68 3.32
2209 2325 1.043673 AACCCTAGTCGCCCTAGCTG 61.044 60.000 0.00 0.00 41.68 4.24
2210 2326 2.731374 CCTAGTCGCCCTAGCTGC 59.269 66.667 0.00 0.00 41.68 5.25
2211 2327 2.731374 CTAGTCGCCCTAGCTGCC 59.269 66.667 0.00 0.00 36.98 4.85
2212 2328 3.200887 CTAGTCGCCCTAGCTGCCG 62.201 68.421 0.00 0.00 36.98 5.69
2218 2334 4.232878 CCCTAGCTGCCGCCAGAG 62.233 72.222 0.00 0.00 41.77 3.35
2219 2335 4.232878 CCTAGCTGCCGCCAGAGG 62.233 72.222 0.00 0.00 41.77 3.69
2220 2336 3.465403 CTAGCTGCCGCCAGAGGT 61.465 66.667 0.00 0.00 41.77 3.85
2221 2337 2.043349 TAGCTGCCGCCAGAGGTA 60.043 61.111 0.00 0.00 41.77 3.08
2222 2338 2.356818 CTAGCTGCCGCCAGAGGTAC 62.357 65.000 0.00 0.00 41.77 3.34
2223 2339 4.840005 GCTGCCGCCAGAGGTACC 62.840 72.222 2.73 2.73 41.77 3.34
2224 2340 3.390521 CTGCCGCCAGAGGTACCA 61.391 66.667 15.94 0.00 41.77 3.25
2225 2341 3.376935 CTGCCGCCAGAGGTACCAG 62.377 68.421 15.94 3.21 41.77 4.00
2226 2342 4.162690 GCCGCCAGAGGTACCAGG 62.163 72.222 15.94 13.83 0.00 4.45
2227 2343 3.470888 CCGCCAGAGGTACCAGGG 61.471 72.222 15.94 13.11 0.00 4.45
2228 2344 2.683933 CGCCAGAGGTACCAGGGT 60.684 66.667 15.94 0.00 0.00 4.34
2229 2345 1.380785 CGCCAGAGGTACCAGGGTA 60.381 63.158 15.94 0.00 0.00 3.69
2230 2346 0.974010 CGCCAGAGGTACCAGGGTAA 60.974 60.000 15.94 0.00 31.86 2.85
2231 2347 0.540454 GCCAGAGGTACCAGGGTAAC 59.460 60.000 15.94 5.36 38.50 2.50
2232 2348 1.946984 CCAGAGGTACCAGGGTAACA 58.053 55.000 15.94 0.00 40.52 2.41
2233 2349 2.262637 CCAGAGGTACCAGGGTAACAA 58.737 52.381 15.94 0.00 40.52 2.83
2234 2350 2.640826 CCAGAGGTACCAGGGTAACAAA 59.359 50.000 15.94 0.00 40.52 2.83
2235 2351 3.307480 CCAGAGGTACCAGGGTAACAAAG 60.307 52.174 15.94 4.59 40.52 2.77
2236 2352 2.910977 AGAGGTACCAGGGTAACAAAGG 59.089 50.000 15.94 0.00 40.52 3.11
2237 2353 1.353358 AGGTACCAGGGTAACAAAGGC 59.647 52.381 15.94 0.00 40.52 4.35
2238 2354 1.353358 GGTACCAGGGTAACAAAGGCT 59.647 52.381 7.15 0.00 38.14 4.58
2239 2355 2.617276 GGTACCAGGGTAACAAAGGCTC 60.617 54.545 7.15 0.00 38.14 4.70
2240 2356 0.404426 ACCAGGGTAACAAAGGCTCC 59.596 55.000 0.00 0.00 39.74 4.70
2241 2357 0.404040 CCAGGGTAACAAAGGCTCCA 59.596 55.000 0.00 0.00 39.74 3.86
2242 2358 1.005924 CCAGGGTAACAAAGGCTCCAT 59.994 52.381 0.00 0.00 39.74 3.41
2243 2359 2.369394 CAGGGTAACAAAGGCTCCATC 58.631 52.381 0.00 0.00 39.74 3.51
2244 2360 1.285078 AGGGTAACAAAGGCTCCATCC 59.715 52.381 0.00 0.00 39.74 3.51
2245 2361 1.005450 GGGTAACAAAGGCTCCATCCA 59.995 52.381 0.00 0.00 39.74 3.41
2246 2362 2.358195 GGGTAACAAAGGCTCCATCCAT 60.358 50.000 0.00 0.00 39.74 3.41
2247 2363 2.689983 GGTAACAAAGGCTCCATCCATG 59.310 50.000 0.00 0.00 0.00 3.66
2248 2364 2.610438 AACAAAGGCTCCATCCATGT 57.390 45.000 0.00 0.00 32.21 3.21
2249 2365 2.610438 ACAAAGGCTCCATCCATGTT 57.390 45.000 0.00 0.00 0.00 2.71
2250 2366 2.893424 ACAAAGGCTCCATCCATGTTT 58.107 42.857 0.00 0.00 0.00 2.83
2251 2367 2.564062 ACAAAGGCTCCATCCATGTTTG 59.436 45.455 0.00 0.00 0.00 2.93
2252 2368 2.827322 CAAAGGCTCCATCCATGTTTGA 59.173 45.455 0.00 0.00 0.00 2.69
2253 2369 2.905415 AGGCTCCATCCATGTTTGAA 57.095 45.000 0.00 0.00 0.00 2.69
2254 2370 3.393426 AGGCTCCATCCATGTTTGAAT 57.607 42.857 0.00 0.00 0.00 2.57
2255 2371 3.028850 AGGCTCCATCCATGTTTGAATG 58.971 45.455 0.00 0.00 0.00 2.67
2256 2372 2.762327 GGCTCCATCCATGTTTGAATGT 59.238 45.455 0.00 0.00 0.00 2.71
2257 2373 3.953612 GGCTCCATCCATGTTTGAATGTA 59.046 43.478 0.00 0.00 0.00 2.29
2258 2374 4.586001 GGCTCCATCCATGTTTGAATGTAT 59.414 41.667 0.00 0.00 0.00 2.29
2259 2375 5.069516 GGCTCCATCCATGTTTGAATGTATT 59.930 40.000 0.00 0.00 0.00 1.89
2260 2376 6.407299 GGCTCCATCCATGTTTGAATGTATTT 60.407 38.462 0.00 0.00 0.00 1.40
2261 2377 7.043565 GCTCCATCCATGTTTGAATGTATTTT 58.956 34.615 0.00 0.00 0.00 1.82
2262 2378 7.550196 GCTCCATCCATGTTTGAATGTATTTTT 59.450 33.333 0.00 0.00 0.00 1.94
2263 2379 9.090692 CTCCATCCATGTTTGAATGTATTTTTC 57.909 33.333 0.00 0.00 0.00 2.29
2264 2380 8.591940 TCCATCCATGTTTGAATGTATTTTTCA 58.408 29.630 0.00 0.00 0.00 2.69
2265 2381 9.217278 CCATCCATGTTTGAATGTATTTTTCAA 57.783 29.630 0.00 0.00 40.37 2.69
2268 2384 9.993454 TCCATGTTTGAATGTATTTTTCAATCA 57.007 25.926 10.55 10.55 42.43 2.57
2316 2432 9.616156 TGTAACTAGGTTCTTTTTGTATGTTGA 57.384 29.630 0.00 0.00 0.00 3.18
2319 2435 8.514330 ACTAGGTTCTTTTTGTATGTTGAACA 57.486 30.769 0.00 0.00 36.50 3.18
2320 2436 9.131791 ACTAGGTTCTTTTTGTATGTTGAACAT 57.868 29.630 15.80 15.80 42.35 2.71
2321 2437 9.965824 CTAGGTTCTTTTTGTATGTTGAACATT 57.034 29.630 16.75 1.02 39.88 2.71
2322 2438 8.647143 AGGTTCTTTTTGTATGTTGAACATTG 57.353 30.769 16.75 0.00 39.88 2.82
2323 2439 7.710475 AGGTTCTTTTTGTATGTTGAACATTGG 59.290 33.333 16.75 0.41 39.88 3.16
2324 2440 7.042119 GGTTCTTTTTGTATGTTGAACATTGGG 60.042 37.037 16.75 1.37 39.88 4.12
2325 2441 5.988561 TCTTTTTGTATGTTGAACATTGGGC 59.011 36.000 16.75 5.67 39.88 5.36
2326 2442 3.951775 TTGTATGTTGAACATTGGGCC 57.048 42.857 16.75 0.00 39.88 5.80
2327 2443 2.881734 TGTATGTTGAACATTGGGCCA 58.118 42.857 16.75 0.00 39.88 5.36
2328 2444 2.560542 TGTATGTTGAACATTGGGCCAC 59.439 45.455 16.75 7.82 39.88 5.01
2329 2445 1.714541 ATGTTGAACATTGGGCCACA 58.285 45.000 5.23 0.00 34.67 4.17
2330 2446 0.749649 TGTTGAACATTGGGCCACAC 59.250 50.000 5.23 0.00 0.00 3.82
2331 2447 1.039856 GTTGAACATTGGGCCACACT 58.960 50.000 5.23 0.00 0.00 3.55
2332 2448 2.235016 GTTGAACATTGGGCCACACTA 58.765 47.619 5.23 0.00 0.00 2.74
2333 2449 2.825532 GTTGAACATTGGGCCACACTAT 59.174 45.455 5.23 0.00 0.00 2.12
2334 2450 4.013728 GTTGAACATTGGGCCACACTATA 58.986 43.478 5.23 0.00 0.00 1.31
2335 2451 4.518278 TGAACATTGGGCCACACTATAT 57.482 40.909 5.23 0.00 0.00 0.86
2336 2452 5.638530 TGAACATTGGGCCACACTATATA 57.361 39.130 5.23 0.00 0.00 0.86
2337 2453 6.199557 TGAACATTGGGCCACACTATATAT 57.800 37.500 5.23 0.00 0.00 0.86
2338 2454 7.323052 TGAACATTGGGCCACACTATATATA 57.677 36.000 5.23 0.00 0.00 0.86
2339 2455 7.394016 TGAACATTGGGCCACACTATATATAG 58.606 38.462 16.73 16.73 36.46 1.31
2340 2456 7.236640 TGAACATTGGGCCACACTATATATAGA 59.763 37.037 23.70 1.26 34.50 1.98
2341 2457 6.947464 ACATTGGGCCACACTATATATAGAC 58.053 40.000 23.70 9.03 34.50 2.59
2342 2458 6.730977 ACATTGGGCCACACTATATATAGACT 59.269 38.462 23.70 7.29 34.50 3.24
2343 2459 6.852420 TTGGGCCACACTATATATAGACTC 57.148 41.667 23.70 9.57 34.50 3.36
2344 2460 4.948004 TGGGCCACACTATATATAGACTCG 59.052 45.833 23.70 12.24 34.50 4.18
2345 2461 5.191426 GGGCCACACTATATATAGACTCGA 58.809 45.833 23.70 0.00 34.50 4.04
2346 2462 5.297278 GGGCCACACTATATATAGACTCGAG 59.703 48.000 23.70 11.84 34.50 4.04
2347 2463 5.881443 GGCCACACTATATATAGACTCGAGT 59.119 44.000 20.18 20.18 34.50 4.18
2348 2464 6.374894 GGCCACACTATATATAGACTCGAGTT 59.625 42.308 23.70 12.03 34.50 3.01
2349 2465 7.244898 GCCACACTATATATAGACTCGAGTTG 58.755 42.308 23.70 11.98 34.50 3.16
2350 2466 7.626664 GCCACACTATATATAGACTCGAGTTGG 60.627 44.444 23.70 18.11 34.50 3.77
2351 2467 7.244898 CACACTATATATAGACTCGAGTTGGC 58.755 42.308 23.70 7.11 34.50 4.52
2352 2468 6.940867 ACACTATATATAGACTCGAGTTGGCA 59.059 38.462 23.70 6.43 34.50 4.92
2353 2469 7.447545 ACACTATATATAGACTCGAGTTGGCAA 59.552 37.037 23.70 5.31 34.50 4.52
2354 2470 8.297426 CACTATATATAGACTCGAGTTGGCAAA 58.703 37.037 23.70 5.31 34.50 3.68
2355 2471 8.857098 ACTATATATAGACTCGAGTTGGCAAAA 58.143 33.333 23.70 3.76 34.50 2.44
2356 2472 9.692749 CTATATATAGACTCGAGTTGGCAAAAA 57.307 33.333 21.08 2.37 32.05 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 6.885918 TCAGATGTCATTTAGGCTCAAAATGA 59.114 34.615 17.40 17.40 46.08 2.57
53 54 2.556622 GGGGCAAAATCGTCTTTTCAGA 59.443 45.455 0.00 0.00 0.00 3.27
181 192 1.603293 CGTACACACGCAGTAGACAG 58.397 55.000 0.00 0.00 41.61 3.51
208 230 2.817834 AACAGCACACACACGCGT 60.818 55.556 5.58 5.58 0.00 6.01
209 231 2.351097 CAACAGCACACACACGCG 60.351 61.111 3.53 3.53 0.00 6.01
277 317 1.130411 CGCAGCACACACACATACG 59.870 57.895 0.00 0.00 0.00 3.06
365 425 1.298264 CATGCAACAACACGCACGT 60.298 52.632 0.00 0.00 41.79 4.49
381 442 2.894879 ACGCACACGCACACACAT 60.895 55.556 0.00 0.00 45.53 3.21
392 453 3.045277 GCACCAACACACACGCACA 62.045 57.895 0.00 0.00 0.00 4.57
475 547 2.158682 TCATGTGGTATGTATGTGGGGC 60.159 50.000 0.00 0.00 0.00 5.80
483 556 1.886422 TGCCCCTCATGTGGTATGTA 58.114 50.000 12.65 0.00 0.00 2.29
602 675 3.490439 TGCTTCCTCATTTGACACTGA 57.510 42.857 0.00 0.00 0.00 3.41
603 676 6.446781 AATATGCTTCCTCATTTGACACTG 57.553 37.500 0.00 0.00 0.00 3.66
604 677 7.472334 AAAATATGCTTCCTCATTTGACACT 57.528 32.000 0.00 0.00 0.00 3.55
605 678 9.294030 CTTAAAATATGCTTCCTCATTTGACAC 57.706 33.333 0.00 0.00 0.00 3.67
606 679 9.241919 TCTTAAAATATGCTTCCTCATTTGACA 57.758 29.630 0.00 0.00 0.00 3.58
613 686 9.547753 GACACTATCTTAAAATATGCTTCCTCA 57.452 33.333 0.00 0.00 0.00 3.86
614 687 9.547753 TGACACTATCTTAAAATATGCTTCCTC 57.452 33.333 0.00 0.00 0.00 3.71
615 688 9.905713 TTGACACTATCTTAAAATATGCTTCCT 57.094 29.630 0.00 0.00 0.00 3.36
631 704 9.922305 CGAGAAAATTCCTTATTTGACACTATC 57.078 33.333 0.00 0.00 36.57 2.08
632 705 8.398665 GCGAGAAAATTCCTTATTTGACACTAT 58.601 33.333 0.00 0.00 36.57 2.12
633 706 7.148306 GGCGAGAAAATTCCTTATTTGACACTA 60.148 37.037 0.00 0.00 36.57 2.74
634 707 6.349363 GGCGAGAAAATTCCTTATTTGACACT 60.349 38.462 0.00 0.00 36.57 3.55
635 708 5.800438 GGCGAGAAAATTCCTTATTTGACAC 59.200 40.000 0.00 0.00 36.57 3.67
636 709 5.475220 TGGCGAGAAAATTCCTTATTTGACA 59.525 36.000 0.00 0.00 36.57 3.58
637 710 5.800438 GTGGCGAGAAAATTCCTTATTTGAC 59.200 40.000 0.00 0.00 36.57 3.18
638 711 5.710099 AGTGGCGAGAAAATTCCTTATTTGA 59.290 36.000 0.00 0.00 36.57 2.69
639 712 5.954335 AGTGGCGAGAAAATTCCTTATTTG 58.046 37.500 0.00 0.00 36.57 2.32
640 713 6.590234 AAGTGGCGAGAAAATTCCTTATTT 57.410 33.333 0.00 0.00 38.08 1.40
641 714 6.590234 AAAGTGGCGAGAAAATTCCTTATT 57.410 33.333 0.00 0.00 0.00 1.40
642 715 7.881775 ATAAAGTGGCGAGAAAATTCCTTAT 57.118 32.000 0.00 0.00 0.00 1.73
643 716 7.696992 AATAAAGTGGCGAGAAAATTCCTTA 57.303 32.000 0.00 0.00 0.00 2.69
644 717 6.590234 AATAAAGTGGCGAGAAAATTCCTT 57.410 33.333 0.00 0.00 0.00 3.36
645 718 7.696992 TTAATAAAGTGGCGAGAAAATTCCT 57.303 32.000 0.00 0.00 0.00 3.36
646 719 8.926715 AATTAATAAAGTGGCGAGAAAATTCC 57.073 30.769 0.00 0.00 0.00 3.01
653 726 9.332502 TGCTTAATAATTAATAAAGTGGCGAGA 57.667 29.630 0.00 0.00 0.00 4.04
654 727 9.382244 GTGCTTAATAATTAATAAAGTGGCGAG 57.618 33.333 0.00 0.00 0.00 5.03
655 728 8.894731 TGTGCTTAATAATTAATAAAGTGGCGA 58.105 29.630 0.00 0.00 0.00 5.54
656 729 9.509855 TTGTGCTTAATAATTAATAAAGTGGCG 57.490 29.630 0.00 0.00 0.00 5.69
834 907 0.693049 GGTATGTGGCTAGGATGGGG 59.307 60.000 0.00 0.00 0.00 4.96
835 908 0.321671 CGGTATGTGGCTAGGATGGG 59.678 60.000 0.00 0.00 0.00 4.00
836 909 0.321671 CCGGTATGTGGCTAGGATGG 59.678 60.000 0.00 0.00 0.00 3.51
837 910 1.338107 TCCGGTATGTGGCTAGGATG 58.662 55.000 0.00 0.00 0.00 3.51
838 911 1.902508 CATCCGGTATGTGGCTAGGAT 59.097 52.381 0.00 0.00 38.87 3.24
839 912 1.338107 CATCCGGTATGTGGCTAGGA 58.662 55.000 0.00 0.00 0.00 2.94
840 913 0.320771 GCATCCGGTATGTGGCTAGG 60.321 60.000 0.00 0.00 37.93 3.02
841 914 0.320771 GGCATCCGGTATGTGGCTAG 60.321 60.000 0.00 0.00 37.93 3.42
842 915 1.752198 GGCATCCGGTATGTGGCTA 59.248 57.895 0.00 0.00 37.93 3.93
843 916 2.510906 GGCATCCGGTATGTGGCT 59.489 61.111 0.00 0.00 37.93 4.75
844 917 2.594592 GGGCATCCGGTATGTGGC 60.595 66.667 0.00 9.00 37.93 5.01
845 918 2.067932 ATGGGGCATCCGGTATGTGG 62.068 60.000 0.00 0.00 37.93 4.17
846 919 0.606401 GATGGGGCATCCGGTATGTG 60.606 60.000 0.00 0.00 37.93 3.21
847 920 1.761174 GATGGGGCATCCGGTATGT 59.239 57.895 0.00 0.00 37.93 2.29
848 921 4.722193 GATGGGGCATCCGGTATG 57.278 61.111 0.00 5.40 38.76 2.39
855 928 1.073897 GTGGCTAGGATGGGGCATC 59.926 63.158 0.00 0.00 40.00 3.91
856 929 1.070127 ATGTGGCTAGGATGGGGCAT 61.070 55.000 0.00 0.00 40.00 4.40
857 930 0.401250 TATGTGGCTAGGATGGGGCA 60.401 55.000 0.00 0.00 35.68 5.36
858 931 0.036875 GTATGTGGCTAGGATGGGGC 59.963 60.000 0.00 0.00 0.00 5.80
1017 1091 4.681978 GACGAGCGCAGGGTGGTT 62.682 66.667 11.47 0.00 32.53 3.67
1595 1686 3.720949 TCTTTTCTTCGAACTCCGTCA 57.279 42.857 0.00 0.00 39.75 4.35
1961 2077 4.578516 TCCAAATCTTAATGGCATGTACCG 59.421 41.667 0.00 0.00 36.62 4.02
1963 2079 8.165239 TGTATCCAAATCTTAATGGCATGTAC 57.835 34.615 0.00 0.00 36.62 2.90
1964 2080 8.938801 ATGTATCCAAATCTTAATGGCATGTA 57.061 30.769 0.00 0.00 36.62 2.29
1965 2081 7.506599 TGATGTATCCAAATCTTAATGGCATGT 59.493 33.333 0.00 0.00 36.62 3.21
1966 2082 7.888424 TGATGTATCCAAATCTTAATGGCATG 58.112 34.615 0.00 0.00 36.62 4.06
1967 2083 8.481492 TTGATGTATCCAAATCTTAATGGCAT 57.519 30.769 0.00 0.00 36.62 4.40
1968 2084 7.470424 GCTTGATGTATCCAAATCTTAATGGCA 60.470 37.037 0.00 0.00 36.62 4.92
1969 2085 6.865205 GCTTGATGTATCCAAATCTTAATGGC 59.135 38.462 0.00 0.00 36.62 4.40
1970 2086 7.944061 TGCTTGATGTATCCAAATCTTAATGG 58.056 34.615 0.00 0.00 38.09 3.16
1971 2087 9.459640 CTTGCTTGATGTATCCAAATCTTAATG 57.540 33.333 0.00 0.00 0.00 1.90
1972 2088 8.139989 GCTTGCTTGATGTATCCAAATCTTAAT 58.860 33.333 0.00 0.00 0.00 1.40
1973 2089 7.122501 TGCTTGCTTGATGTATCCAAATCTTAA 59.877 33.333 0.00 0.00 0.00 1.85
1974 2090 6.602803 TGCTTGCTTGATGTATCCAAATCTTA 59.397 34.615 0.00 0.00 0.00 2.10
1975 2091 5.419788 TGCTTGCTTGATGTATCCAAATCTT 59.580 36.000 0.00 0.00 0.00 2.40
1976 2092 4.951715 TGCTTGCTTGATGTATCCAAATCT 59.048 37.500 0.00 0.00 0.00 2.40
1977 2093 5.039333 GTGCTTGCTTGATGTATCCAAATC 58.961 41.667 0.00 0.00 0.00 2.17
1978 2094 4.708421 AGTGCTTGCTTGATGTATCCAAAT 59.292 37.500 0.00 0.00 0.00 2.32
1979 2095 4.081406 AGTGCTTGCTTGATGTATCCAAA 58.919 39.130 0.00 0.00 0.00 3.28
1980 2096 3.441222 CAGTGCTTGCTTGATGTATCCAA 59.559 43.478 0.00 0.00 0.00 3.53
1981 2097 3.011818 CAGTGCTTGCTTGATGTATCCA 58.988 45.455 0.00 0.00 0.00 3.41
1982 2098 3.273434 TCAGTGCTTGCTTGATGTATCC 58.727 45.455 0.00 0.00 0.00 2.59
1983 2099 4.154737 TGTTCAGTGCTTGCTTGATGTATC 59.845 41.667 0.00 0.00 0.00 2.24
1984 2100 4.074259 TGTTCAGTGCTTGCTTGATGTAT 58.926 39.130 0.00 0.00 0.00 2.29
1985 2101 3.250762 GTGTTCAGTGCTTGCTTGATGTA 59.749 43.478 0.00 0.00 0.00 2.29
1986 2102 2.033801 GTGTTCAGTGCTTGCTTGATGT 59.966 45.455 0.00 0.00 0.00 3.06
1987 2103 2.292569 AGTGTTCAGTGCTTGCTTGATG 59.707 45.455 0.00 0.00 0.00 3.07
1988 2104 2.292569 CAGTGTTCAGTGCTTGCTTGAT 59.707 45.455 0.00 0.00 0.00 2.57
1989 2105 1.672363 CAGTGTTCAGTGCTTGCTTGA 59.328 47.619 0.00 0.00 0.00 3.02
1990 2106 1.672363 TCAGTGTTCAGTGCTTGCTTG 59.328 47.619 3.07 0.00 0.00 4.01
1991 2107 2.042686 TCAGTGTTCAGTGCTTGCTT 57.957 45.000 3.07 0.00 0.00 3.91
1992 2108 1.672881 GTTCAGTGTTCAGTGCTTGCT 59.327 47.619 3.07 0.00 0.00 3.91
1993 2109 1.672881 AGTTCAGTGTTCAGTGCTTGC 59.327 47.619 3.07 0.00 0.00 4.01
1994 2110 3.374988 TGAAGTTCAGTGTTCAGTGCTTG 59.625 43.478 0.08 0.00 0.00 4.01
1995 2111 3.375299 GTGAAGTTCAGTGTTCAGTGCTT 59.625 43.478 5.62 2.47 33.37 3.91
1996 2112 2.939103 GTGAAGTTCAGTGTTCAGTGCT 59.061 45.455 5.62 0.00 33.37 4.40
1997 2113 2.939103 AGTGAAGTTCAGTGTTCAGTGC 59.061 45.455 12.50 0.00 35.46 4.40
1998 2114 6.662414 TTAAGTGAAGTTCAGTGTTCAGTG 57.338 37.500 13.95 1.62 36.63 3.66
1999 2115 7.012421 GGATTTAAGTGAAGTTCAGTGTTCAGT 59.988 37.037 13.95 0.13 37.84 3.41
2000 2116 7.355778 GGATTTAAGTGAAGTTCAGTGTTCAG 58.644 38.462 13.95 0.00 33.37 3.02
2001 2117 6.018262 CGGATTTAAGTGAAGTTCAGTGTTCA 60.018 38.462 13.95 0.01 28.97 3.18
2002 2118 6.202188 TCGGATTTAAGTGAAGTTCAGTGTTC 59.798 38.462 13.95 8.43 28.97 3.18
2003 2119 6.053005 TCGGATTTAAGTGAAGTTCAGTGTT 58.947 36.000 13.95 7.06 28.97 3.32
2004 2120 5.607477 TCGGATTTAAGTGAAGTTCAGTGT 58.393 37.500 13.95 7.18 28.97 3.55
2005 2121 6.727824 ATCGGATTTAAGTGAAGTTCAGTG 57.272 37.500 13.95 0.29 28.97 3.66
2006 2122 7.360101 CGAAATCGGATTTAAGTGAAGTTCAGT 60.360 37.037 15.50 6.60 35.37 3.41
2007 2123 6.955963 CGAAATCGGATTTAAGTGAAGTTCAG 59.044 38.462 15.50 0.00 35.37 3.02
2008 2124 6.425721 ACGAAATCGGATTTAAGTGAAGTTCA 59.574 34.615 15.50 0.08 44.95 3.18
2009 2125 6.828672 ACGAAATCGGATTTAAGTGAAGTTC 58.171 36.000 15.50 0.00 44.95 3.01
2010 2126 6.796705 ACGAAATCGGATTTAAGTGAAGTT 57.203 33.333 15.50 0.00 44.95 2.66
2011 2127 6.034256 CGTACGAAATCGGATTTAAGTGAAGT 59.966 38.462 23.11 14.43 44.95 3.01
2012 2128 6.252015 TCGTACGAAATCGGATTTAAGTGAAG 59.748 38.462 17.11 16.88 44.95 3.02
2013 2129 6.033831 GTCGTACGAAATCGGATTTAAGTGAA 59.966 38.462 21.39 10.14 44.95 3.18
2014 2130 5.512788 GTCGTACGAAATCGGATTTAAGTGA 59.487 40.000 21.39 15.07 44.95 3.41
2015 2131 5.276067 GGTCGTACGAAATCGGATTTAAGTG 60.276 44.000 21.39 14.24 44.95 3.16
2016 2132 4.800471 GGTCGTACGAAATCGGATTTAAGT 59.200 41.667 21.39 18.47 44.95 2.24
2017 2133 4.799949 TGGTCGTACGAAATCGGATTTAAG 59.200 41.667 21.39 14.33 44.95 1.85
2018 2134 4.562394 GTGGTCGTACGAAATCGGATTTAA 59.438 41.667 21.39 2.77 44.95 1.52
2019 2135 4.104776 GTGGTCGTACGAAATCGGATTTA 58.895 43.478 21.39 0.00 44.95 1.40
2020 2136 2.925563 GTGGTCGTACGAAATCGGATTT 59.074 45.455 21.39 15.45 44.95 2.17
2021 2137 2.094597 TGTGGTCGTACGAAATCGGATT 60.095 45.455 21.39 0.00 44.95 3.01
2022 2138 1.473677 TGTGGTCGTACGAAATCGGAT 59.526 47.619 21.39 0.00 44.95 4.18
2023 2139 0.880441 TGTGGTCGTACGAAATCGGA 59.120 50.000 21.39 0.00 44.95 4.55
2024 2140 1.850441 GATGTGGTCGTACGAAATCGG 59.150 52.381 21.39 0.00 44.95 4.18
2025 2141 2.278094 GTGATGTGGTCGTACGAAATCG 59.722 50.000 21.39 0.48 46.33 3.34
2026 2142 3.508762 AGTGATGTGGTCGTACGAAATC 58.491 45.455 21.39 19.03 0.00 2.17
2027 2143 3.587797 AGTGATGTGGTCGTACGAAAT 57.412 42.857 21.39 11.32 0.00 2.17
2028 2144 3.311106 GAAGTGATGTGGTCGTACGAAA 58.689 45.455 21.39 8.79 0.00 3.46
2029 2145 2.352030 GGAAGTGATGTGGTCGTACGAA 60.352 50.000 21.39 4.42 0.00 3.85
2030 2146 1.200716 GGAAGTGATGTGGTCGTACGA 59.799 52.381 15.28 15.28 0.00 3.43
2031 2147 1.201647 AGGAAGTGATGTGGTCGTACG 59.798 52.381 9.53 9.53 0.00 3.67
2032 2148 4.445452 TTAGGAAGTGATGTGGTCGTAC 57.555 45.455 0.00 0.00 0.00 3.67
2033 2149 4.619863 GCTTTAGGAAGTGATGTGGTCGTA 60.620 45.833 0.00 0.00 35.25 3.43
2034 2150 3.864921 GCTTTAGGAAGTGATGTGGTCGT 60.865 47.826 0.00 0.00 35.25 4.34
2035 2151 2.673368 GCTTTAGGAAGTGATGTGGTCG 59.327 50.000 0.00 0.00 35.25 4.79
2036 2152 3.010420 GGCTTTAGGAAGTGATGTGGTC 58.990 50.000 0.00 0.00 35.25 4.02
2037 2153 2.644798 AGGCTTTAGGAAGTGATGTGGT 59.355 45.455 0.00 0.00 35.25 4.16
2038 2154 3.356529 AGGCTTTAGGAAGTGATGTGG 57.643 47.619 0.00 0.00 35.25 4.17
2039 2155 4.832248 TGTAGGCTTTAGGAAGTGATGTG 58.168 43.478 0.00 0.00 35.25 3.21
2040 2156 5.700402 ATGTAGGCTTTAGGAAGTGATGT 57.300 39.130 0.00 0.00 35.25 3.06
2041 2157 6.480320 GTGTATGTAGGCTTTAGGAAGTGATG 59.520 42.308 0.00 0.00 35.25 3.07
2042 2158 6.408206 GGTGTATGTAGGCTTTAGGAAGTGAT 60.408 42.308 0.00 0.00 35.25 3.06
2043 2159 5.105064 GGTGTATGTAGGCTTTAGGAAGTGA 60.105 44.000 0.00 0.00 35.25 3.41
2044 2160 5.116882 GGTGTATGTAGGCTTTAGGAAGTG 58.883 45.833 0.00 0.00 35.25 3.16
2045 2161 4.781087 TGGTGTATGTAGGCTTTAGGAAGT 59.219 41.667 0.00 0.00 35.25 3.01
2046 2162 5.104900 AGTGGTGTATGTAGGCTTTAGGAAG 60.105 44.000 0.00 0.00 35.92 3.46
2047 2163 4.781087 AGTGGTGTATGTAGGCTTTAGGAA 59.219 41.667 0.00 0.00 0.00 3.36
2048 2164 4.359105 AGTGGTGTATGTAGGCTTTAGGA 58.641 43.478 0.00 0.00 0.00 2.94
2049 2165 4.755266 AGTGGTGTATGTAGGCTTTAGG 57.245 45.455 0.00 0.00 0.00 2.69
2050 2166 6.202954 GCAATAGTGGTGTATGTAGGCTTTAG 59.797 42.308 0.00 0.00 0.00 1.85
2051 2167 6.053005 GCAATAGTGGTGTATGTAGGCTTTA 58.947 40.000 0.00 0.00 0.00 1.85
2052 2168 4.881850 GCAATAGTGGTGTATGTAGGCTTT 59.118 41.667 0.00 0.00 0.00 3.51
2053 2169 4.080582 TGCAATAGTGGTGTATGTAGGCTT 60.081 41.667 0.00 0.00 0.00 4.35
2054 2170 3.454447 TGCAATAGTGGTGTATGTAGGCT 59.546 43.478 0.00 0.00 0.00 4.58
2055 2171 3.804036 TGCAATAGTGGTGTATGTAGGC 58.196 45.455 0.00 0.00 0.00 3.93
2056 2172 5.182487 TGTTGCAATAGTGGTGTATGTAGG 58.818 41.667 0.59 0.00 0.00 3.18
2057 2173 6.316140 ACATGTTGCAATAGTGGTGTATGTAG 59.684 38.462 0.59 0.00 0.00 2.74
2058 2174 6.176896 ACATGTTGCAATAGTGGTGTATGTA 58.823 36.000 0.59 0.00 0.00 2.29
2059 2175 5.009631 ACATGTTGCAATAGTGGTGTATGT 58.990 37.500 0.59 0.00 0.00 2.29
2060 2176 5.565592 ACATGTTGCAATAGTGGTGTATG 57.434 39.130 0.59 0.00 0.00 2.39
2061 2177 6.176896 TGTACATGTTGCAATAGTGGTGTAT 58.823 36.000 2.30 0.00 0.00 2.29
2062 2178 5.552178 TGTACATGTTGCAATAGTGGTGTA 58.448 37.500 2.30 2.77 0.00 2.90
2063 2179 4.393834 TGTACATGTTGCAATAGTGGTGT 58.606 39.130 2.30 3.82 0.00 4.16
2064 2180 5.153513 GTTGTACATGTTGCAATAGTGGTG 58.846 41.667 2.30 0.00 0.00 4.17
2065 2181 4.824537 TGTTGTACATGTTGCAATAGTGGT 59.175 37.500 2.30 2.83 0.00 4.16
2066 2182 5.369685 TGTTGTACATGTTGCAATAGTGG 57.630 39.130 2.30 0.00 0.00 4.00
2067 2183 7.619776 GCATTTGTTGTACATGTTGCAATAGTG 60.620 37.037 2.30 11.46 31.88 2.74
2068 2184 6.365789 GCATTTGTTGTACATGTTGCAATAGT 59.634 34.615 2.30 4.49 31.88 2.12
2069 2185 6.452741 CGCATTTGTTGTACATGTTGCAATAG 60.453 38.462 2.30 0.00 31.38 1.73
2070 2186 5.344396 CGCATTTGTTGTACATGTTGCAATA 59.656 36.000 2.30 0.00 31.38 1.90
2071 2187 4.150274 CGCATTTGTTGTACATGTTGCAAT 59.850 37.500 2.30 0.00 31.38 3.56
2072 2188 3.488678 CGCATTTGTTGTACATGTTGCAA 59.511 39.130 2.30 7.56 31.38 4.08
2073 2189 3.048501 CGCATTTGTTGTACATGTTGCA 58.951 40.909 2.30 0.57 31.38 4.08
2074 2190 2.159986 GCGCATTTGTTGTACATGTTGC 60.160 45.455 2.30 4.05 0.00 4.17
2075 2191 3.119956 CAGCGCATTTGTTGTACATGTTG 59.880 43.478 11.47 0.00 0.00 3.33
2076 2192 3.004210 TCAGCGCATTTGTTGTACATGTT 59.996 39.130 11.47 0.00 0.00 2.71
2077 2193 2.551887 TCAGCGCATTTGTTGTACATGT 59.448 40.909 11.47 2.69 0.00 3.21
2078 2194 3.120234 TCTCAGCGCATTTGTTGTACATG 60.120 43.478 11.47 0.00 0.00 3.21
2079 2195 3.073678 TCTCAGCGCATTTGTTGTACAT 58.926 40.909 11.47 0.00 0.00 2.29
2080 2196 2.480037 CTCTCAGCGCATTTGTTGTACA 59.520 45.455 11.47 0.00 0.00 2.90
2081 2197 2.480419 ACTCTCAGCGCATTTGTTGTAC 59.520 45.455 11.47 0.00 0.00 2.90
2082 2198 2.766313 ACTCTCAGCGCATTTGTTGTA 58.234 42.857 11.47 0.00 0.00 2.41
2083 2199 1.597742 ACTCTCAGCGCATTTGTTGT 58.402 45.000 11.47 0.00 0.00 3.32
2084 2200 2.738846 AGTACTCTCAGCGCATTTGTTG 59.261 45.455 11.47 0.00 0.00 3.33
2085 2201 2.996621 GAGTACTCTCAGCGCATTTGTT 59.003 45.455 15.91 0.00 40.18 2.83
2086 2202 2.611518 GAGTACTCTCAGCGCATTTGT 58.388 47.619 15.91 4.15 40.18 2.83
2087 2203 1.929836 GGAGTACTCTCAGCGCATTTG 59.070 52.381 21.88 0.00 42.05 2.32
2088 2204 1.827969 AGGAGTACTCTCAGCGCATTT 59.172 47.619 21.88 0.00 42.05 2.32
2089 2205 1.479709 AGGAGTACTCTCAGCGCATT 58.520 50.000 21.88 0.00 42.05 3.56
2090 2206 1.950909 GTAGGAGTACTCTCAGCGCAT 59.049 52.381 21.88 0.00 42.05 4.73
2091 2207 1.339727 TGTAGGAGTACTCTCAGCGCA 60.340 52.381 21.88 10.06 42.05 6.09
2092 2208 1.380524 TGTAGGAGTACTCTCAGCGC 58.619 55.000 21.88 0.00 42.05 5.92
2093 2209 4.436242 TTTTGTAGGAGTACTCTCAGCG 57.564 45.455 21.88 0.00 42.05 5.18
2114 2230 7.550551 TCGACTAAGATGAATGAGCTCATTTTT 59.449 33.333 35.91 27.09 45.72 1.94
2115 2231 7.044181 TCGACTAAGATGAATGAGCTCATTTT 58.956 34.615 35.91 28.11 45.72 1.82
2116 2232 6.577103 TCGACTAAGATGAATGAGCTCATTT 58.423 36.000 35.91 24.67 45.72 2.32
2118 2234 5.781210 TCGACTAAGATGAATGAGCTCAT 57.219 39.130 23.75 23.75 38.79 2.90
2119 2235 5.278709 GGATCGACTAAGATGAATGAGCTCA 60.279 44.000 20.79 20.79 0.00 4.26
2120 2236 5.160641 GGATCGACTAAGATGAATGAGCTC 58.839 45.833 6.82 6.82 0.00 4.09
2121 2237 4.320861 CGGATCGACTAAGATGAATGAGCT 60.321 45.833 0.00 0.00 0.00 4.09
2122 2238 3.917380 CGGATCGACTAAGATGAATGAGC 59.083 47.826 0.00 0.00 0.00 4.26
2123 2239 3.917380 GCGGATCGACTAAGATGAATGAG 59.083 47.826 0.00 0.00 0.00 2.90
2124 2240 3.305403 GGCGGATCGACTAAGATGAATGA 60.305 47.826 0.00 0.00 0.00 2.57
2125 2241 2.989840 GGCGGATCGACTAAGATGAATG 59.010 50.000 0.00 0.00 0.00 2.67
2126 2242 2.628178 TGGCGGATCGACTAAGATGAAT 59.372 45.455 0.00 0.00 35.04 2.57
2127 2243 2.028876 TGGCGGATCGACTAAGATGAA 58.971 47.619 0.00 0.00 35.04 2.57
2128 2244 1.337071 GTGGCGGATCGACTAAGATGA 59.663 52.381 0.00 0.00 35.04 2.92
2129 2245 1.772182 GTGGCGGATCGACTAAGATG 58.228 55.000 0.00 0.00 35.04 2.90
2130 2246 0.311165 CGTGGCGGATCGACTAAGAT 59.689 55.000 0.00 0.00 35.04 2.40
2131 2247 1.725665 CGTGGCGGATCGACTAAGA 59.274 57.895 0.00 0.00 35.04 2.10
2132 2248 1.944676 GCGTGGCGGATCGACTAAG 60.945 63.158 0.00 0.00 35.04 2.18
2133 2249 2.103538 GCGTGGCGGATCGACTAA 59.896 61.111 0.00 0.00 35.04 2.24
2134 2250 3.896133 GGCGTGGCGGATCGACTA 61.896 66.667 0.00 0.00 35.04 2.59
2139 2255 4.899239 CAGGAGGCGTGGCGGATC 62.899 72.222 0.00 0.00 0.00 3.36
2143 2259 4.680237 TTGACAGGAGGCGTGGCG 62.680 66.667 0.00 0.00 28.73 5.69
2144 2260 2.527951 ATCTTGACAGGAGGCGTGGC 62.528 60.000 0.00 0.00 0.00 5.01
2145 2261 0.460987 GATCTTGACAGGAGGCGTGG 60.461 60.000 0.00 0.00 0.00 4.94
2146 2262 0.247460 TGATCTTGACAGGAGGCGTG 59.753 55.000 0.00 0.00 0.00 5.34
2147 2263 0.976641 TTGATCTTGACAGGAGGCGT 59.023 50.000 0.00 0.00 0.00 5.68
2148 2264 1.363744 GTTGATCTTGACAGGAGGCG 58.636 55.000 0.00 0.00 0.00 5.52
2149 2265 1.066858 TCGTTGATCTTGACAGGAGGC 60.067 52.381 0.00 0.00 0.00 4.70
2150 2266 2.886081 CTCGTTGATCTTGACAGGAGG 58.114 52.381 0.00 0.00 0.00 4.30
2151 2267 2.266554 GCTCGTTGATCTTGACAGGAG 58.733 52.381 0.00 0.00 0.00 3.69
2152 2268 1.066858 GGCTCGTTGATCTTGACAGGA 60.067 52.381 0.00 0.00 0.00 3.86
2153 2269 1.363744 GGCTCGTTGATCTTGACAGG 58.636 55.000 0.00 0.00 0.00 4.00
2154 2270 1.363744 GGGCTCGTTGATCTTGACAG 58.636 55.000 0.00 0.00 0.00 3.51
2155 2271 0.036388 GGGGCTCGTTGATCTTGACA 60.036 55.000 0.00 0.00 0.00 3.58
2156 2272 1.084370 CGGGGCTCGTTGATCTTGAC 61.084 60.000 0.00 0.00 0.00 3.18
2157 2273 1.218047 CGGGGCTCGTTGATCTTGA 59.782 57.895 0.00 0.00 0.00 3.02
2158 2274 0.179073 ATCGGGGCTCGTTGATCTTG 60.179 55.000 6.68 0.00 40.32 3.02
2159 2275 0.179073 CATCGGGGCTCGTTGATCTT 60.179 55.000 12.37 0.00 40.04 2.40
2160 2276 1.043116 TCATCGGGGCTCGTTGATCT 61.043 55.000 16.08 0.00 41.10 2.75
2161 2277 0.598680 CTCATCGGGGCTCGTTGATC 60.599 60.000 19.80 0.00 43.77 2.92
2162 2278 1.330655 ACTCATCGGGGCTCGTTGAT 61.331 55.000 19.80 8.56 43.77 2.57
2163 2279 1.945354 GACTCATCGGGGCTCGTTGA 61.945 60.000 18.60 18.60 42.96 3.18
2164 2280 1.519455 GACTCATCGGGGCTCGTTG 60.519 63.158 11.53 11.53 39.26 4.10
2165 2281 2.722201 GGACTCATCGGGGCTCGTT 61.722 63.158 6.68 0.00 40.32 3.85
2166 2282 3.148279 GGACTCATCGGGGCTCGT 61.148 66.667 6.68 0.00 40.32 4.18
2167 2283 3.917760 GGGACTCATCGGGGCTCG 61.918 72.222 0.00 0.00 40.90 5.03
2168 2284 3.551407 GGGGACTCATCGGGGCTC 61.551 72.222 0.00 0.00 0.00 4.70
2169 2285 4.095400 AGGGGACTCATCGGGGCT 62.095 66.667 0.00 0.00 32.90 5.19
2180 2296 0.822811 GACTAGGGTTTCGAGGGGAC 59.177 60.000 0.00 0.00 0.00 4.46
2181 2297 0.682209 CGACTAGGGTTTCGAGGGGA 60.682 60.000 0.00 0.00 37.43 4.81
2182 2298 1.814527 CGACTAGGGTTTCGAGGGG 59.185 63.158 0.00 0.00 37.43 4.79
2183 2299 1.141234 GCGACTAGGGTTTCGAGGG 59.859 63.158 4.79 0.00 37.43 4.30
2184 2300 1.141234 GGCGACTAGGGTTTCGAGG 59.859 63.158 4.79 0.00 37.43 4.63
2185 2301 1.141234 GGGCGACTAGGGTTTCGAG 59.859 63.158 4.79 0.00 37.43 4.04
2186 2302 0.034186 TAGGGCGACTAGGGTTTCGA 60.034 55.000 4.79 0.00 37.43 3.71
2187 2303 0.384669 CTAGGGCGACTAGGGTTTCG 59.615 60.000 6.25 0.00 44.50 3.46
2204 2320 2.043349 TACCTCTGGCGGCAGCTA 60.043 61.111 32.43 16.68 44.37 3.32
2205 2321 3.775654 GTACCTCTGGCGGCAGCT 61.776 66.667 32.43 19.20 44.37 4.24
2206 2322 4.840005 GGTACCTCTGGCGGCAGC 62.840 72.222 32.43 18.36 44.18 5.25
2207 2323 3.376935 CTGGTACCTCTGGCGGCAG 62.377 68.421 31.58 31.58 0.00 4.85
2208 2324 3.390521 CTGGTACCTCTGGCGGCA 61.391 66.667 12.58 12.58 0.00 5.69
2209 2325 4.162690 CCTGGTACCTCTGGCGGC 62.163 72.222 14.36 0.00 0.00 6.53
2210 2326 2.866523 TACCCTGGTACCTCTGGCGG 62.867 65.000 14.36 5.78 0.00 6.13
2211 2327 0.974010 TTACCCTGGTACCTCTGGCG 60.974 60.000 14.36 9.11 0.00 5.69
2212 2328 0.540454 GTTACCCTGGTACCTCTGGC 59.460 60.000 14.36 0.00 0.00 4.85
2213 2329 1.946984 TGTTACCCTGGTACCTCTGG 58.053 55.000 14.36 12.87 0.00 3.86
2214 2330 3.307480 CCTTTGTTACCCTGGTACCTCTG 60.307 52.174 14.36 3.53 0.00 3.35
2215 2331 2.910977 CCTTTGTTACCCTGGTACCTCT 59.089 50.000 14.36 0.00 0.00 3.69
2216 2332 2.617276 GCCTTTGTTACCCTGGTACCTC 60.617 54.545 14.36 0.00 0.00 3.85
2217 2333 1.353358 GCCTTTGTTACCCTGGTACCT 59.647 52.381 14.36 0.00 0.00 3.08
2218 2334 1.353358 AGCCTTTGTTACCCTGGTACC 59.647 52.381 4.43 4.43 0.00 3.34
2219 2335 2.617276 GGAGCCTTTGTTACCCTGGTAC 60.617 54.545 0.00 0.00 0.00 3.34
2220 2336 1.631898 GGAGCCTTTGTTACCCTGGTA 59.368 52.381 0.00 0.00 0.00 3.25
2221 2337 0.404426 GGAGCCTTTGTTACCCTGGT 59.596 55.000 0.00 0.00 0.00 4.00
2222 2338 0.404040 TGGAGCCTTTGTTACCCTGG 59.596 55.000 0.00 0.00 0.00 4.45
2223 2339 2.369394 GATGGAGCCTTTGTTACCCTG 58.631 52.381 0.00 0.00 0.00 4.45
2224 2340 1.285078 GGATGGAGCCTTTGTTACCCT 59.715 52.381 0.00 0.00 0.00 4.34
2225 2341 1.005450 TGGATGGAGCCTTTGTTACCC 59.995 52.381 0.00 0.00 0.00 3.69
2226 2342 2.507407 TGGATGGAGCCTTTGTTACC 57.493 50.000 0.00 0.00 0.00 2.85
2227 2343 3.356290 ACATGGATGGAGCCTTTGTTAC 58.644 45.455 0.00 0.00 0.00 2.50
2228 2344 3.737559 ACATGGATGGAGCCTTTGTTA 57.262 42.857 0.00 0.00 0.00 2.41
2229 2345 2.610438 ACATGGATGGAGCCTTTGTT 57.390 45.000 0.00 0.00 0.00 2.83
2230 2346 2.564062 CAAACATGGATGGAGCCTTTGT 59.436 45.455 0.00 0.00 0.00 2.83
2231 2347 2.827322 TCAAACATGGATGGAGCCTTTG 59.173 45.455 0.00 0.00 0.00 2.77
2232 2348 3.173953 TCAAACATGGATGGAGCCTTT 57.826 42.857 0.00 0.00 0.00 3.11
2233 2349 2.905415 TCAAACATGGATGGAGCCTT 57.095 45.000 0.00 0.00 0.00 4.35
2234 2350 2.905415 TTCAAACATGGATGGAGCCT 57.095 45.000 0.00 0.00 0.00 4.58
2235 2351 2.762327 ACATTCAAACATGGATGGAGCC 59.238 45.455 0.00 0.00 0.00 4.70
2236 2352 5.779529 ATACATTCAAACATGGATGGAGC 57.220 39.130 0.00 0.00 0.00 4.70
2237 2353 9.090692 GAAAAATACATTCAAACATGGATGGAG 57.909 33.333 0.00 0.00 27.17 3.86
2238 2354 8.591940 TGAAAAATACATTCAAACATGGATGGA 58.408 29.630 0.00 0.00 34.04 3.41
2239 2355 8.774890 TGAAAAATACATTCAAACATGGATGG 57.225 30.769 0.00 0.00 34.04 3.51
2242 2358 9.993454 TGATTGAAAAATACATTCAAACATGGA 57.007 25.926 5.87 0.00 46.46 3.41
2290 2406 9.616156 TCAACATACAAAAAGAACCTAGTTACA 57.384 29.630 0.00 0.00 0.00 2.41
2293 2409 8.962679 TGTTCAACATACAAAAAGAACCTAGTT 58.037 29.630 0.00 0.00 35.68 2.24
2294 2410 8.514330 TGTTCAACATACAAAAAGAACCTAGT 57.486 30.769 0.00 0.00 35.68 2.57
2295 2411 9.965824 AATGTTCAACATACAAAAAGAACCTAG 57.034 29.630 2.67 0.00 37.97 3.02
2296 2412 9.743057 CAATGTTCAACATACAAAAAGAACCTA 57.257 29.630 2.67 0.00 37.97 3.08
2297 2413 7.710475 CCAATGTTCAACATACAAAAAGAACCT 59.290 33.333 2.67 0.00 37.97 3.50
2298 2414 7.042119 CCCAATGTTCAACATACAAAAAGAACC 60.042 37.037 2.67 0.00 37.97 3.62
2299 2415 7.518211 GCCCAATGTTCAACATACAAAAAGAAC 60.518 37.037 2.67 0.00 37.97 3.01
2300 2416 6.481644 GCCCAATGTTCAACATACAAAAAGAA 59.518 34.615 2.67 0.00 37.97 2.52
2301 2417 5.988561 GCCCAATGTTCAACATACAAAAAGA 59.011 36.000 2.67 0.00 37.97 2.52
2302 2418 5.179182 GGCCCAATGTTCAACATACAAAAAG 59.821 40.000 2.67 0.00 37.97 2.27
2303 2419 5.059833 GGCCCAATGTTCAACATACAAAAA 58.940 37.500 2.67 0.00 37.97 1.94
2304 2420 4.101585 TGGCCCAATGTTCAACATACAAAA 59.898 37.500 2.67 0.00 37.97 2.44
2305 2421 3.643320 TGGCCCAATGTTCAACATACAAA 59.357 39.130 2.67 0.00 37.97 2.83
2306 2422 3.006323 GTGGCCCAATGTTCAACATACAA 59.994 43.478 2.67 0.00 37.97 2.41
2307 2423 2.560542 GTGGCCCAATGTTCAACATACA 59.439 45.455 2.67 0.00 37.97 2.29
2308 2424 2.560542 TGTGGCCCAATGTTCAACATAC 59.439 45.455 2.67 0.00 37.97 2.39
2309 2425 2.560542 GTGTGGCCCAATGTTCAACATA 59.439 45.455 2.67 0.00 37.97 2.29
2310 2426 1.344114 GTGTGGCCCAATGTTCAACAT 59.656 47.619 0.00 0.00 41.31 2.71
2311 2427 0.749649 GTGTGGCCCAATGTTCAACA 59.250 50.000 0.00 0.00 0.00 3.33
2312 2428 1.039856 AGTGTGGCCCAATGTTCAAC 58.960 50.000 0.00 0.00 0.00 3.18
2313 2429 2.666272 TAGTGTGGCCCAATGTTCAA 57.334 45.000 0.00 0.00 0.00 2.69
2314 2430 2.897271 ATAGTGTGGCCCAATGTTCA 57.103 45.000 0.00 0.00 0.00 3.18
2315 2431 7.549488 GTCTATATATAGTGTGGCCCAATGTTC 59.451 40.741 17.44 0.00 0.00 3.18
2316 2432 7.237679 AGTCTATATATAGTGTGGCCCAATGTT 59.762 37.037 17.44 0.00 0.00 2.71
2317 2433 6.730977 AGTCTATATATAGTGTGGCCCAATGT 59.269 38.462 17.44 0.00 0.00 2.71
2318 2434 7.187824 AGTCTATATATAGTGTGGCCCAATG 57.812 40.000 17.44 0.00 0.00 2.82
2319 2435 6.096987 CGAGTCTATATATAGTGTGGCCCAAT 59.903 42.308 17.44 0.00 0.00 3.16
2320 2436 5.417894 CGAGTCTATATATAGTGTGGCCCAA 59.582 44.000 17.44 0.00 0.00 4.12
2321 2437 4.948004 CGAGTCTATATATAGTGTGGCCCA 59.052 45.833 17.44 0.00 0.00 5.36
2322 2438 5.191426 TCGAGTCTATATATAGTGTGGCCC 58.809 45.833 17.44 0.00 0.00 5.80
2323 2439 5.881443 ACTCGAGTCTATATATAGTGTGGCC 59.119 44.000 13.58 0.00 0.00 5.36
2324 2440 6.988622 ACTCGAGTCTATATATAGTGTGGC 57.011 41.667 13.58 6.37 0.00 5.01
2325 2441 7.626664 GCCAACTCGAGTCTATATATAGTGTGG 60.627 44.444 20.33 17.79 0.00 4.17
2326 2442 7.094762 TGCCAACTCGAGTCTATATATAGTGTG 60.095 40.741 20.33 8.26 0.00 3.82
2327 2443 6.940867 TGCCAACTCGAGTCTATATATAGTGT 59.059 38.462 20.33 7.73 0.00 3.55
2328 2444 7.379098 TGCCAACTCGAGTCTATATATAGTG 57.621 40.000 20.33 9.00 0.00 2.74
2329 2445 7.997773 TTGCCAACTCGAGTCTATATATAGT 57.002 36.000 20.33 0.00 0.00 2.12
2330 2446 9.692749 TTTTTGCCAACTCGAGTCTATATATAG 57.307 33.333 20.33 12.84 0.00 1.31


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.