Multiple sequence alignment - TraesCS7D01G553300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G553300 chr7D 100.000 6168 0 0 1 6168 636765504 636771671 0.000000e+00 11391.0
1 TraesCS7D01G553300 chr7D 84.279 617 61 20 988 1594 566310976 566311566 2.490000e-158 569.0
2 TraesCS7D01G553300 chr7A 91.200 2500 129 36 440 2904 729401734 729399291 0.000000e+00 3314.0
3 TraesCS7D01G553300 chr7A 91.800 1378 87 15 4525 5892 729398200 729396839 0.000000e+00 1895.0
4 TraesCS7D01G553300 chr7A 90.949 685 36 16 4925 5592 729356242 729355567 0.000000e+00 898.0
5 TraesCS7D01G553300 chr7A 90.657 685 38 16 4925 5592 729333322 729332647 0.000000e+00 887.0
6 TraesCS7D01G553300 chr7A 94.256 383 16 3 4158 4540 729399249 729398873 1.150000e-161 580.0
7 TraesCS7D01G553300 chr7A 80.680 735 120 16 4177 4895 729357022 729356294 9.040000e-153 551.0
8 TraesCS7D01G553300 chr7A 80.680 735 119 17 4177 4895 729334101 729333374 3.250000e-152 549.0
9 TraesCS7D01G553300 chr7A 89.418 189 7 8 207 387 729401999 729401816 6.220000e-55 226.0
10 TraesCS7D01G553300 chr7B 89.078 2582 157 52 263 2770 739446191 739443661 0.000000e+00 3090.0
11 TraesCS7D01G553300 chr7B 89.633 1717 130 21 4158 5846 739443519 739441823 0.000000e+00 2141.0
12 TraesCS7D01G553300 chr7B 93.171 659 35 5 4249 4905 739415965 739415315 0.000000e+00 959.0
13 TraesCS7D01G553300 chr7B 93.171 659 35 5 4249 4905 739419936 739419286 0.000000e+00 959.0
14 TraesCS7D01G553300 chr7B 88.369 662 38 17 4938 5584 739415304 739414667 0.000000e+00 760.0
15 TraesCS7D01G553300 chr7B 88.369 662 38 17 4938 5584 739419002 739418365 0.000000e+00 760.0
16 TraesCS7D01G553300 chr7B 92.192 333 13 4 5848 6168 739425697 739425366 5.630000e-125 459.0
17 TraesCS7D01G553300 chr7B 84.599 461 44 18 2906 3355 650350630 650350186 3.420000e-117 433.0
18 TraesCS7D01G553300 chr7B 78.958 480 70 24 2906 3355 650283122 650282644 1.300000e-76 298.0
19 TraesCS7D01G553300 chr7B 100.000 33 0 0 202 234 739454660 739454628 1.860000e-05 62.1
20 TraesCS7D01G553300 chr6D 93.810 1147 40 13 2906 4031 258349410 258350546 0.000000e+00 1696.0
21 TraesCS7D01G553300 chr6D 86.776 1157 104 25 2906 4028 423179109 423180250 0.000000e+00 1243.0
22 TraesCS7D01G553300 chr6D 90.738 637 29 8 2906 3521 134685601 134686228 0.000000e+00 822.0
23 TraesCS7D01G553300 chr6D 98.261 115 2 0 4034 4148 134686687 134686801 1.050000e-47 202.0
24 TraesCS7D01G553300 chr4D 92.021 1153 60 17 2906 4027 341409455 341408304 0.000000e+00 1592.0
25 TraesCS7D01G553300 chr4D 91.761 1153 65 22 2906 4029 82733997 82735148 0.000000e+00 1576.0
26 TraesCS7D01G553300 chr4D 98.246 114 2 0 4035 4148 341409342 341409455 3.770000e-47 200.0
27 TraesCS7D01G553300 chr4D 80.069 291 36 16 988 1267 374779361 374779640 4.880000e-46 196.0
28 TraesCS7D01G553300 chr4D 95.122 123 6 0 4034 4156 341408258 341408136 1.750000e-45 195.0
29 TraesCS7D01G553300 chr4D 91.852 135 10 1 1134 1267 374779688 374779822 2.940000e-43 187.0
30 TraesCS7D01G553300 chr6B 87.138 1415 122 24 1444 2825 431161782 431160395 0.000000e+00 1550.0
31 TraesCS7D01G553300 chr6B 86.926 1415 121 25 1444 2825 431205656 431204273 0.000000e+00 1530.0
32 TraesCS7D01G553300 chr2D 88.199 1144 95 17 2906 4031 308901895 308903016 0.000000e+00 1328.0
33 TraesCS7D01G553300 chr2D 89.522 544 47 8 3497 4031 2488984 2489526 0.000000e+00 680.0
34 TraesCS7D01G553300 chr2D 89.319 543 49 7 3497 4031 187968141 187967600 0.000000e+00 673.0
35 TraesCS7D01G553300 chr2D 88.398 543 54 7 3497 4031 460763764 460763223 0.000000e+00 645.0
36 TraesCS7D01G553300 chr2D 89.716 457 42 5 2903 3355 2488322 2488777 4.150000e-161 579.0
37 TraesCS7D01G553300 chr2D 96.774 124 4 0 4034 4157 332509185 332509308 2.250000e-49 207.0
38 TraesCS7D01G553300 chr2D 98.261 115 2 0 4034 4148 63545852 63545966 1.050000e-47 202.0
39 TraesCS7D01G553300 chr2D 77.352 287 52 10 991 1270 389696076 389695796 2.300000e-34 158.0
40 TraesCS7D01G553300 chrUn 92.209 937 50 16 2906 3820 335167005 335167940 0.000000e+00 1304.0
41 TraesCS7D01G553300 chrUn 98.246 114 2 0 4035 4148 335167118 335167005 3.770000e-47 200.0
42 TraesCS7D01G553300 chr6A 88.179 1049 96 14 3010 4031 566423835 566422788 0.000000e+00 1225.0
43 TraesCS7D01G553300 chr1D 88.745 542 52 7 3498 4031 234834367 234833827 0.000000e+00 654.0
44 TraesCS7D01G553300 chr1D 90.487 452 41 2 2905 3355 234835025 234834575 4.120000e-166 595.0
45 TraesCS7D01G553300 chr1D 83.516 91 14 1 40 129 118932998 118933088 3.960000e-12 84.2
46 TraesCS7D01G553300 chr5D 90.529 454 38 5 2906 3355 91635856 91635404 4.120000e-166 595.0
47 TraesCS7D01G553300 chr5D 97.222 36 1 0 24 59 96000656 96000621 1.860000e-05 62.1
48 TraesCS7D01G553300 chr2B 88.987 454 45 5 2906 3355 247939293 247938841 1.940000e-154 556.0
49 TraesCS7D01G553300 chr5B 86.432 199 12 9 1868 2052 483351844 483351647 2.910000e-48 204.0
50 TraesCS7D01G553300 chr5B 90.566 53 4 1 28 79 291385840 291385788 1.110000e-07 69.4
51 TraesCS7D01G553300 chr2A 98.261 115 2 0 4034 4148 38377024 38376910 1.050000e-47 202.0
52 TraesCS7D01G553300 chr4A 80.576 278 39 12 1001 1270 374662364 374662094 3.770000e-47 200.0
53 TraesCS7D01G553300 chr4A 90.647 139 12 1 1133 1270 374662050 374661912 3.800000e-42 183.0
54 TraesCS7D01G553300 chr4A 100.000 28 0 0 26 53 609580755 609580728 1.100000e-02 52.8
55 TraesCS7D01G553300 chr3A 96.667 120 4 0 4034 4153 208218358 208218239 3.770000e-47 200.0
56 TraesCS7D01G553300 chr3D 97.414 116 3 0 4034 4149 319867601 319867716 1.360000e-46 198.0
57 TraesCS7D01G553300 chr1B 95.556 45 1 1 32 75 310148692 310148736 3.080000e-08 71.3
58 TraesCS7D01G553300 chr5A 96.970 33 1 0 27 59 564171874 564171906 8.640000e-04 56.5
59 TraesCS7D01G553300 chr4B 96.970 33 1 0 28 60 127692104 127692072 8.640000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G553300 chr7D 636765504 636771671 6167 False 11391.00 11391 100.0000 1 6168 1 chr7D.!!$F2 6167
1 TraesCS7D01G553300 chr7D 566310976 566311566 590 False 569.00 569 84.2790 988 1594 1 chr7D.!!$F1 606
2 TraesCS7D01G553300 chr7A 729396839 729401999 5160 True 1503.75 3314 91.6685 207 5892 4 chr7A.!!$R3 5685
3 TraesCS7D01G553300 chr7A 729355567 729357022 1455 True 724.50 898 85.8145 4177 5592 2 chr7A.!!$R2 1415
4 TraesCS7D01G553300 chr7A 729332647 729334101 1454 True 718.00 887 85.6685 4177 5592 2 chr7A.!!$R1 1415
5 TraesCS7D01G553300 chr7B 739441823 739446191 4368 True 2615.50 3090 89.3555 263 5846 2 chr7B.!!$R6 5583
6 TraesCS7D01G553300 chr7B 739414667 739419936 5269 True 859.50 959 90.7700 4249 5584 4 chr7B.!!$R5 1335
7 TraesCS7D01G553300 chr6D 258349410 258350546 1136 False 1696.00 1696 93.8100 2906 4031 1 chr6D.!!$F1 1125
8 TraesCS7D01G553300 chr6D 423179109 423180250 1141 False 1243.00 1243 86.7760 2906 4028 1 chr6D.!!$F2 1122
9 TraesCS7D01G553300 chr6D 134685601 134686801 1200 False 512.00 822 94.4995 2906 4148 2 chr6D.!!$F3 1242
10 TraesCS7D01G553300 chr4D 82733997 82735148 1151 False 1576.00 1576 91.7610 2906 4029 1 chr4D.!!$F1 1123
11 TraesCS7D01G553300 chr4D 341408136 341409455 1319 True 893.50 1592 93.5715 2906 4156 2 chr4D.!!$R1 1250
12 TraesCS7D01G553300 chr6B 431160395 431161782 1387 True 1550.00 1550 87.1380 1444 2825 1 chr6B.!!$R1 1381
13 TraesCS7D01G553300 chr6B 431204273 431205656 1383 True 1530.00 1530 86.9260 1444 2825 1 chr6B.!!$R2 1381
14 TraesCS7D01G553300 chr2D 308901895 308903016 1121 False 1328.00 1328 88.1990 2906 4031 1 chr2D.!!$F2 1125
15 TraesCS7D01G553300 chr2D 187967600 187968141 541 True 673.00 673 89.3190 3497 4031 1 chr2D.!!$R1 534
16 TraesCS7D01G553300 chr2D 460763223 460763764 541 True 645.00 645 88.3980 3497 4031 1 chr2D.!!$R3 534
17 TraesCS7D01G553300 chr2D 2488322 2489526 1204 False 629.50 680 89.6190 2903 4031 2 chr2D.!!$F4 1128
18 TraesCS7D01G553300 chrUn 335167005 335167940 935 False 1304.00 1304 92.2090 2906 3820 1 chrUn.!!$F1 914
19 TraesCS7D01G553300 chr6A 566422788 566423835 1047 True 1225.00 1225 88.1790 3010 4031 1 chr6A.!!$R1 1021
20 TraesCS7D01G553300 chr1D 234833827 234835025 1198 True 624.50 654 89.6160 2905 4031 2 chr1D.!!$R1 1126

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
828 919 0.032130 GACAGAGCGTGTGTCCAAGA 59.968 55.0 0.00 0.00 40.56 3.02 F
829 920 0.032678 ACAGAGCGTGTGTCCAAGAG 59.967 55.0 0.00 0.00 38.28 2.85 F
2213 2366 0.034574 TCCTTTGTGCAGTGTGGTGT 60.035 50.0 0.00 0.00 0.00 4.16 F
3256 3487 1.524863 CCTCCGTCGTCCTCAACTGT 61.525 60.0 0.00 0.00 0.00 3.55 F
3504 3805 0.962356 CTGAAGCATCGGCCTTGGTT 60.962 55.0 16.91 16.91 42.56 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2213 2366 0.394488 CCAGCTCGTCTGTCCTCCTA 60.394 60.000 6.67 0.0 41.25 2.94 R
2427 2580 0.966920 ACCACCACTCTGTTCTACCG 59.033 55.000 0.00 0.0 0.00 4.02 R
3504 3805 1.674651 AGCTCGTGTGGTAGCTCGA 60.675 57.895 0.00 0.0 45.92 4.04 R
4595 5656 0.035881 CTCCCTCTTCTTGCACTGCA 59.964 55.000 0.00 0.0 36.47 4.41 R
5316 6716 0.322816 AGCCCTTCGTGTCATGCATT 60.323 50.000 0.00 0.0 0.00 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.996480 AGCAAGAAGGTTCTGTCAGTAC 58.004 45.455 0.00 0.00 37.65 2.73
22 23 3.388024 AGCAAGAAGGTTCTGTCAGTACA 59.612 43.478 11.25 0.00 37.65 2.90
37 38 7.490657 TGTCAGTACAGGAAAATATGGTACT 57.509 36.000 0.00 0.00 43.85 2.73
38 39 7.553334 TGTCAGTACAGGAAAATATGGTACTC 58.447 38.462 0.00 0.00 41.83 2.59
39 40 6.985059 GTCAGTACAGGAAAATATGGTACTCC 59.015 42.308 0.00 0.00 41.83 3.85
40 41 6.099269 TCAGTACAGGAAAATATGGTACTCCC 59.901 42.308 0.00 0.00 41.83 4.30
41 42 6.099845 CAGTACAGGAAAATATGGTACTCCCT 59.900 42.308 0.00 0.00 41.83 4.20
42 43 5.632034 ACAGGAAAATATGGTACTCCCTC 57.368 43.478 0.00 0.00 0.00 4.30
43 44 4.412528 ACAGGAAAATATGGTACTCCCTCC 59.587 45.833 0.00 0.00 0.00 4.30
44 45 3.646637 AGGAAAATATGGTACTCCCTCCG 59.353 47.826 0.00 0.00 0.00 4.63
45 46 3.644738 GGAAAATATGGTACTCCCTCCGA 59.355 47.826 0.00 0.00 0.00 4.55
46 47 4.286291 GGAAAATATGGTACTCCCTCCGAT 59.714 45.833 0.00 0.00 0.00 4.18
47 48 5.480205 GAAAATATGGTACTCCCTCCGATC 58.520 45.833 0.00 0.00 0.00 3.69
48 49 2.599408 TATGGTACTCCCTCCGATCC 57.401 55.000 0.00 0.00 0.00 3.36
49 50 0.561184 ATGGTACTCCCTCCGATCCA 59.439 55.000 0.00 0.00 0.00 3.41
50 51 0.561184 TGGTACTCCCTCCGATCCAT 59.439 55.000 0.00 0.00 0.00 3.41
51 52 1.784593 TGGTACTCCCTCCGATCCATA 59.215 52.381 0.00 0.00 0.00 2.74
52 53 2.382305 TGGTACTCCCTCCGATCCATAT 59.618 50.000 0.00 0.00 0.00 1.78
53 54 3.181410 TGGTACTCCCTCCGATCCATATT 60.181 47.826 0.00 0.00 0.00 1.28
54 55 4.044952 TGGTACTCCCTCCGATCCATATTA 59.955 45.833 0.00 0.00 0.00 0.98
55 56 4.401837 GGTACTCCCTCCGATCCATATTAC 59.598 50.000 0.00 0.00 0.00 1.89
56 57 4.405756 ACTCCCTCCGATCCATATTACT 57.594 45.455 0.00 0.00 0.00 2.24
57 58 4.753186 ACTCCCTCCGATCCATATTACTT 58.247 43.478 0.00 0.00 0.00 2.24
58 59 4.528596 ACTCCCTCCGATCCATATTACTTG 59.471 45.833 0.00 0.00 0.00 3.16
59 60 3.260884 TCCCTCCGATCCATATTACTTGC 59.739 47.826 0.00 0.00 0.00 4.01
60 61 3.007940 CCCTCCGATCCATATTACTTGCA 59.992 47.826 0.00 0.00 0.00 4.08
61 62 4.323792 CCCTCCGATCCATATTACTTGCAT 60.324 45.833 0.00 0.00 0.00 3.96
62 63 5.248640 CCTCCGATCCATATTACTTGCATT 58.751 41.667 0.00 0.00 0.00 3.56
63 64 5.352569 CCTCCGATCCATATTACTTGCATTC 59.647 44.000 0.00 0.00 0.00 2.67
64 65 5.863965 TCCGATCCATATTACTTGCATTCA 58.136 37.500 0.00 0.00 0.00 2.57
65 66 6.295249 TCCGATCCATATTACTTGCATTCAA 58.705 36.000 0.00 0.00 0.00 2.69
66 67 6.770303 TCCGATCCATATTACTTGCATTCAAA 59.230 34.615 0.00 0.00 0.00 2.69
67 68 6.857964 CCGATCCATATTACTTGCATTCAAAC 59.142 38.462 0.00 0.00 0.00 2.93
68 69 6.574832 CGATCCATATTACTTGCATTCAAACG 59.425 38.462 0.00 0.00 0.00 3.60
69 70 6.130298 TCCATATTACTTGCATTCAAACGG 57.870 37.500 0.00 0.00 0.00 4.44
70 71 5.883115 TCCATATTACTTGCATTCAAACGGA 59.117 36.000 0.00 0.00 0.00 4.69
71 72 6.545666 TCCATATTACTTGCATTCAAACGGAT 59.454 34.615 0.00 0.00 0.00 4.18
72 73 6.638063 CCATATTACTTGCATTCAAACGGATG 59.362 38.462 0.00 0.00 0.00 3.51
73 74 5.643379 ATTACTTGCATTCAAACGGATGT 57.357 34.783 0.00 0.00 0.00 3.06
74 75 6.751514 ATTACTTGCATTCAAACGGATGTA 57.248 33.333 0.00 0.00 0.00 2.29
75 76 6.751514 TTACTTGCATTCAAACGGATGTAT 57.248 33.333 0.00 0.00 0.00 2.29
76 77 5.643379 ACTTGCATTCAAACGGATGTATT 57.357 34.783 0.00 0.00 0.00 1.89
77 78 6.024552 ACTTGCATTCAAACGGATGTATTT 57.975 33.333 0.00 0.00 0.00 1.40
78 79 7.151999 ACTTGCATTCAAACGGATGTATTTA 57.848 32.000 0.00 0.00 0.00 1.40
79 80 7.598278 ACTTGCATTCAAACGGATGTATTTAA 58.402 30.769 0.00 0.00 0.00 1.52
80 81 8.250332 ACTTGCATTCAAACGGATGTATTTAAT 58.750 29.630 0.00 0.00 0.00 1.40
81 82 9.729023 CTTGCATTCAAACGGATGTATTTAATA 57.271 29.630 0.00 0.00 0.00 0.98
82 83 9.509855 TTGCATTCAAACGGATGTATTTAATAC 57.490 29.630 8.07 8.07 36.29 1.89
83 84 8.898761 TGCATTCAAACGGATGTATTTAATACT 58.101 29.630 15.05 2.51 36.70 2.12
84 85 9.169468 GCATTCAAACGGATGTATTTAATACTG 57.831 33.333 15.05 4.74 36.70 2.74
113 114 9.720874 ATATATCTAGATACCTCCATTTCAGCA 57.279 33.333 14.71 0.00 0.00 4.41
114 115 6.753913 ATCTAGATACCTCCATTTCAGCAA 57.246 37.500 2.53 0.00 0.00 3.91
115 116 6.753913 TCTAGATACCTCCATTTCAGCAAT 57.246 37.500 0.00 0.00 0.00 3.56
116 117 7.855784 TCTAGATACCTCCATTTCAGCAATA 57.144 36.000 0.00 0.00 0.00 1.90
117 118 8.262601 TCTAGATACCTCCATTTCAGCAATAA 57.737 34.615 0.00 0.00 0.00 1.40
118 119 8.370940 TCTAGATACCTCCATTTCAGCAATAAG 58.629 37.037 0.00 0.00 0.00 1.73
119 120 6.904626 AGATACCTCCATTTCAGCAATAAGT 58.095 36.000 0.00 0.00 0.00 2.24
120 121 8.034313 AGATACCTCCATTTCAGCAATAAGTA 57.966 34.615 0.00 0.00 0.00 2.24
121 122 8.494433 AGATACCTCCATTTCAGCAATAAGTAA 58.506 33.333 0.00 0.00 0.00 2.24
122 123 9.289782 GATACCTCCATTTCAGCAATAAGTAAT 57.710 33.333 0.00 0.00 0.00 1.89
125 126 9.646522 ACCTCCATTTCAGCAATAAGTAATATT 57.353 29.630 0.00 0.00 34.45 1.28
134 135 9.653287 TCAGCAATAAGTAATATTAATCGGAGG 57.347 33.333 0.00 0.00 32.84 4.30
135 136 8.883731 CAGCAATAAGTAATATTAATCGGAGGG 58.116 37.037 0.00 0.00 32.84 4.30
136 137 8.822805 AGCAATAAGTAATATTAATCGGAGGGA 58.177 33.333 0.00 0.00 32.84 4.20
137 138 9.099454 GCAATAAGTAATATTAATCGGAGGGAG 57.901 37.037 0.00 0.00 32.84 4.30
142 143 8.716674 AGTAATATTAATCGGAGGGAGTAACA 57.283 34.615 0.00 0.00 37.95 2.41
143 144 8.583296 AGTAATATTAATCGGAGGGAGTAACAC 58.417 37.037 0.00 0.00 37.95 3.32
144 145 6.989155 ATATTAATCGGAGGGAGTAACACA 57.011 37.500 0.00 0.00 37.95 3.72
145 146 5.687166 ATTAATCGGAGGGAGTAACACAA 57.313 39.130 0.00 0.00 37.95 3.33
146 147 5.486735 TTAATCGGAGGGAGTAACACAAA 57.513 39.130 0.00 0.00 30.79 2.83
147 148 2.825861 TCGGAGGGAGTAACACAAAC 57.174 50.000 0.00 0.00 0.00 2.93
148 149 1.345415 TCGGAGGGAGTAACACAAACC 59.655 52.381 0.00 0.00 0.00 3.27
149 150 1.346722 CGGAGGGAGTAACACAAACCT 59.653 52.381 0.00 0.00 0.00 3.50
150 151 2.779506 GGAGGGAGTAACACAAACCTG 58.220 52.381 0.00 0.00 0.00 4.00
151 152 2.370849 GGAGGGAGTAACACAAACCTGA 59.629 50.000 0.00 0.00 0.00 3.86
152 153 3.009143 GGAGGGAGTAACACAAACCTGAT 59.991 47.826 0.00 0.00 0.00 2.90
153 154 4.224370 GGAGGGAGTAACACAAACCTGATA 59.776 45.833 0.00 0.00 0.00 2.15
154 155 5.104485 GGAGGGAGTAACACAAACCTGATAT 60.104 44.000 0.00 0.00 0.00 1.63
155 156 5.990668 AGGGAGTAACACAAACCTGATATC 58.009 41.667 0.00 0.00 0.00 1.63
156 157 5.726793 AGGGAGTAACACAAACCTGATATCT 59.273 40.000 3.98 0.00 0.00 1.98
157 158 5.817816 GGGAGTAACACAAACCTGATATCTG 59.182 44.000 3.98 3.30 0.00 2.90
158 159 6.351881 GGGAGTAACACAAACCTGATATCTGA 60.352 42.308 10.93 0.00 0.00 3.27
159 160 7.103641 GGAGTAACACAAACCTGATATCTGAA 58.896 38.462 10.93 0.00 0.00 3.02
160 161 7.770897 GGAGTAACACAAACCTGATATCTGAAT 59.229 37.037 10.93 0.00 0.00 2.57
161 162 8.498054 AGTAACACAAACCTGATATCTGAATG 57.502 34.615 10.93 8.77 0.00 2.67
162 163 5.824904 ACACAAACCTGATATCTGAATGC 57.175 39.130 10.93 0.00 0.00 3.56
163 164 5.503927 ACACAAACCTGATATCTGAATGCT 58.496 37.500 10.93 0.00 0.00 3.79
164 165 6.653020 ACACAAACCTGATATCTGAATGCTA 58.347 36.000 10.93 0.00 0.00 3.49
165 166 6.540189 ACACAAACCTGATATCTGAATGCTAC 59.460 38.462 10.93 0.00 0.00 3.58
166 167 6.017605 CACAAACCTGATATCTGAATGCTACC 60.018 42.308 10.93 0.00 0.00 3.18
167 168 5.894298 AACCTGATATCTGAATGCTACCA 57.106 39.130 10.93 0.00 0.00 3.25
168 169 5.220710 ACCTGATATCTGAATGCTACCAC 57.779 43.478 10.93 0.00 0.00 4.16
169 170 4.655649 ACCTGATATCTGAATGCTACCACA 59.344 41.667 10.93 0.00 0.00 4.17
170 171 4.993584 CCTGATATCTGAATGCTACCACAC 59.006 45.833 10.93 0.00 0.00 3.82
171 172 5.453762 CCTGATATCTGAATGCTACCACACA 60.454 44.000 10.93 0.00 0.00 3.72
172 173 5.359756 TGATATCTGAATGCTACCACACAC 58.640 41.667 3.98 0.00 0.00 3.82
173 174 3.701205 ATCTGAATGCTACCACACACA 57.299 42.857 0.00 0.00 0.00 3.72
174 175 2.766313 TCTGAATGCTACCACACACAC 58.234 47.619 0.00 0.00 0.00 3.82
175 176 2.368548 TCTGAATGCTACCACACACACT 59.631 45.455 0.00 0.00 0.00 3.55
176 177 2.481568 CTGAATGCTACCACACACACTG 59.518 50.000 0.00 0.00 0.00 3.66
177 178 1.806542 GAATGCTACCACACACACTGG 59.193 52.381 0.00 0.00 34.62 4.00
178 179 0.036732 ATGCTACCACACACACTGGG 59.963 55.000 0.00 0.00 32.45 4.45
179 180 1.051556 TGCTACCACACACACTGGGA 61.052 55.000 0.00 0.00 32.45 4.37
180 181 0.602905 GCTACCACACACACTGGGAC 60.603 60.000 0.00 0.00 32.45 4.46
181 182 0.756294 CTACCACACACACTGGGACA 59.244 55.000 0.00 0.00 32.45 4.02
192 193 2.600164 TGGGACAGCAAGCCAACA 59.400 55.556 0.00 0.00 0.00 3.33
193 194 1.529010 TGGGACAGCAAGCCAACAG 60.529 57.895 0.00 0.00 0.00 3.16
194 195 1.228245 GGGACAGCAAGCCAACAGA 60.228 57.895 0.00 0.00 0.00 3.41
195 196 0.823356 GGGACAGCAAGCCAACAGAA 60.823 55.000 0.00 0.00 0.00 3.02
196 197 0.595095 GGACAGCAAGCCAACAGAAG 59.405 55.000 0.00 0.00 0.00 2.85
197 198 1.312815 GACAGCAAGCCAACAGAAGT 58.687 50.000 0.00 0.00 0.00 3.01
198 199 1.002033 GACAGCAAGCCAACAGAAGTG 60.002 52.381 0.00 0.00 0.00 3.16
199 200 0.313043 CAGCAAGCCAACAGAAGTGG 59.687 55.000 0.00 0.00 0.00 4.00
200 201 0.183492 AGCAAGCCAACAGAAGTGGA 59.817 50.000 0.00 0.00 0.00 4.02
201 202 0.595095 GCAAGCCAACAGAAGTGGAG 59.405 55.000 0.00 0.00 0.00 3.86
202 203 1.242076 CAAGCCAACAGAAGTGGAGG 58.758 55.000 0.00 0.00 0.00 4.30
203 204 0.538287 AAGCCAACAGAAGTGGAGGC 60.538 55.000 0.00 0.00 44.12 4.70
204 205 1.228245 GCCAACAGAAGTGGAGGCA 60.228 57.895 0.00 0.00 43.57 4.75
205 206 1.239968 GCCAACAGAAGTGGAGGCAG 61.240 60.000 0.00 0.00 43.57 4.85
251 260 3.849951 CACGTAGGAGCGCCCCAT 61.850 66.667 11.77 0.00 34.66 4.00
252 261 3.537874 ACGTAGGAGCGCCCCATC 61.538 66.667 11.77 1.10 34.66 3.51
253 262 4.647615 CGTAGGAGCGCCCCATCG 62.648 72.222 11.77 10.60 34.66 3.84
254 263 3.224324 GTAGGAGCGCCCCATCGA 61.224 66.667 11.77 0.00 34.66 3.59
255 264 2.443203 TAGGAGCGCCCCATCGAA 60.443 61.111 11.77 0.00 34.66 3.71
256 265 2.498941 TAGGAGCGCCCCATCGAAG 61.499 63.158 11.77 0.00 34.66 3.79
389 402 0.322636 TGTCTCCTCCACGTCTCTCC 60.323 60.000 0.00 0.00 0.00 3.71
394 407 1.609501 CTCCACGTCTCTCCCCCAA 60.610 63.158 0.00 0.00 0.00 4.12
395 408 1.152204 TCCACGTCTCTCCCCCAAA 60.152 57.895 0.00 0.00 0.00 3.28
396 409 1.192146 TCCACGTCTCTCCCCCAAAG 61.192 60.000 0.00 0.00 0.00 2.77
397 410 1.296715 CACGTCTCTCCCCCAAAGG 59.703 63.158 0.00 0.00 0.00 3.11
398 411 2.269241 CGTCTCTCCCCCAAAGGC 59.731 66.667 0.00 0.00 0.00 4.35
405 459 1.228862 TCCCCCAAAGGCAAAGAGC 60.229 57.895 0.00 0.00 44.65 4.09
497 579 1.961394 CCTTGGCAGCAGCATATTCAT 59.039 47.619 2.65 0.00 44.61 2.57
502 584 4.909001 TGGCAGCAGCATATTCATATACA 58.091 39.130 2.65 0.00 44.61 2.29
503 585 5.503002 TGGCAGCAGCATATTCATATACAT 58.497 37.500 2.65 0.00 44.61 2.29
597 683 2.397751 GCATATGCCGTGAGCTTGT 58.602 52.632 17.26 0.00 44.23 3.16
598 684 1.581934 GCATATGCCGTGAGCTTGTA 58.418 50.000 17.26 0.00 44.23 2.41
599 685 1.528586 GCATATGCCGTGAGCTTGTAG 59.471 52.381 17.26 0.00 44.23 2.74
600 686 1.528586 CATATGCCGTGAGCTTGTAGC 59.471 52.381 0.00 0.00 44.23 3.58
745 836 2.416547 GTGTGCATGCTTGTGTAGTAGG 59.583 50.000 20.33 0.00 0.00 3.18
747 838 2.932614 GTGCATGCTTGTGTAGTAGGAG 59.067 50.000 20.33 0.00 0.00 3.69
748 839 2.567169 TGCATGCTTGTGTAGTAGGAGT 59.433 45.455 20.33 0.00 0.00 3.85
749 840 3.767131 TGCATGCTTGTGTAGTAGGAGTA 59.233 43.478 20.33 0.00 0.00 2.59
755 846 7.798596 TGCTTGTGTAGTAGGAGTAGTATAC 57.201 40.000 0.00 0.00 43.47 1.47
813 904 4.087892 CCACTCCGGCCCAGACAG 62.088 72.222 0.00 0.00 0.00 3.51
822 913 2.737180 CCCAGACAGAGCGTGTGT 59.263 61.111 0.00 0.00 40.56 3.72
823 914 1.373497 CCCAGACAGAGCGTGTGTC 60.373 63.158 7.76 7.76 44.02 3.67
824 915 1.373497 CCAGACAGAGCGTGTGTCC 60.373 63.158 11.19 0.00 44.65 4.02
825 916 1.363807 CAGACAGAGCGTGTGTCCA 59.636 57.895 11.19 0.00 44.65 4.02
826 917 0.249447 CAGACAGAGCGTGTGTCCAA 60.249 55.000 11.19 0.00 44.65 3.53
827 918 0.032678 AGACAGAGCGTGTGTCCAAG 59.967 55.000 11.19 0.00 44.65 3.61
828 919 0.032130 GACAGAGCGTGTGTCCAAGA 59.968 55.000 0.00 0.00 40.56 3.02
829 920 0.032678 ACAGAGCGTGTGTCCAAGAG 59.967 55.000 0.00 0.00 38.28 2.85
830 921 1.005630 AGAGCGTGTGTCCAAGAGC 60.006 57.895 0.00 0.00 0.00 4.09
832 923 4.077188 GCGTGTGTCCAAGAGCGC 62.077 66.667 0.00 0.00 38.15 5.92
833 924 3.414700 CGTGTGTCCAAGAGCGCC 61.415 66.667 2.29 0.00 0.00 6.53
834 925 2.031163 GTGTGTCCAAGAGCGCCT 59.969 61.111 2.29 0.00 0.00 5.52
837 931 0.884704 TGTGTCCAAGAGCGCCTTTC 60.885 55.000 2.29 0.00 31.42 2.62
877 971 0.179020 TGGTGAATCCATCCATCCGC 60.179 55.000 0.00 0.00 41.93 5.54
879 973 0.890996 GTGAATCCATCCATCCGCCC 60.891 60.000 0.00 0.00 0.00 6.13
880 974 1.672356 GAATCCATCCATCCGCCCG 60.672 63.158 0.00 0.00 0.00 6.13
881 975 3.850098 AATCCATCCATCCGCCCGC 62.850 63.158 0.00 0.00 0.00 6.13
883 977 4.996434 CCATCCATCCGCCCGCTC 62.996 72.222 0.00 0.00 0.00 5.03
884 978 4.240103 CATCCATCCGCCCGCTCA 62.240 66.667 0.00 0.00 0.00 4.26
1111 1221 3.756727 GCCTGCTGCCCAAGAAGC 61.757 66.667 0.00 0.00 39.96 3.86
1148 1258 2.813042 GGTGCTCTGCTCGCTCAC 60.813 66.667 0.00 0.00 0.00 3.51
1278 1388 1.209383 CGTCTCGTCGGAGCAGAAA 59.791 57.895 0.00 0.00 40.26 2.52
1461 1578 3.087031 CAAGACCTTCTACCTCGGTACA 58.913 50.000 0.00 0.00 0.00 2.90
1494 1615 8.690203 TTCATGGATACTCTGTTTTTCTTGAA 57.310 30.769 0.00 0.00 37.61 2.69
1506 1627 2.307496 TTCTTGAACCATGGTGGCAT 57.693 45.000 20.60 1.23 42.67 4.40
1531 1652 4.326766 CGTGCCAAGCCGGTGTTG 62.327 66.667 1.90 7.55 36.97 3.33
1534 1655 4.645921 GCCAAGCCGGTGTTGTGC 62.646 66.667 15.10 13.77 36.97 4.57
1768 1889 7.995289 TGAAGCTAGTTTCATTTTCACTTCAA 58.005 30.769 17.05 0.00 38.34 2.69
1772 1893 6.978080 GCTAGTTTCATTTTCACTTCAAACCA 59.022 34.615 0.00 0.00 0.00 3.67
1813 1934 6.010675 CACATTTTGCATCAGTTAAATTGCG 58.989 36.000 0.00 0.00 37.92 4.85
1937 2069 6.089954 GGCAAATAGAAACATTGCTGAACTTC 59.910 38.462 9.28 0.00 46.54 3.01
2045 2197 5.055812 TCAAATTAGGCTTTTTGTTGGCTG 58.944 37.500 17.08 0.00 39.45 4.85
2093 2245 5.105392 ACATGAGAAAAGGTTGCAAGAACAA 60.105 36.000 0.00 0.00 0.00 2.83
2189 2341 6.975197 TCGATCACTTTCAGAATCTGATGTAC 59.025 38.462 14.31 9.60 40.39 2.90
2213 2366 0.034574 TCCTTTGTGCAGTGTGGTGT 60.035 50.000 0.00 0.00 0.00 4.16
2240 2393 4.436998 GACGAGCTGGTGGACGGG 62.437 72.222 5.94 0.00 0.00 5.28
2399 2552 2.515996 TACCAGCTTAGCCGGTGCAC 62.516 60.000 21.22 8.80 41.13 4.57
2427 2580 5.647658 TGTTCAGTCCACATTGTATGATTCC 59.352 40.000 0.00 0.00 0.00 3.01
2492 2649 2.023404 TGCCCCTAGACCTCACAATCTA 60.023 50.000 0.00 0.00 0.00 1.98
2617 2796 1.974028 TGTAGTGGGGGCTTATCCAA 58.026 50.000 0.00 0.00 34.47 3.53
2663 2842 6.668541 ATCGTCTGGTCAAAGATATGTTTG 57.331 37.500 17.08 17.08 38.55 2.93
2675 2854 7.669304 TCAAAGATATGTTTGATCAAAGTGGGA 59.331 33.333 21.05 5.97 40.68 4.37
2758 2937 6.659242 GGAACTTGGAAATGATGTAGAAGGAA 59.341 38.462 0.00 0.00 0.00 3.36
2791 2970 2.234168 GGGAGAGTCCAAGTAACTCCAC 59.766 54.545 0.00 0.00 46.00 4.02
2800 2979 4.841813 TCCAAGTAACTCCACACCTGAATA 59.158 41.667 0.00 0.00 0.00 1.75
2826 3005 6.515272 ACATCATGAAAATGTACTTGGTCC 57.485 37.500 0.00 0.00 35.62 4.46
2855 3034 2.979814 ACTGGGCTTTGTTGTTTTCC 57.020 45.000 0.00 0.00 0.00 3.13
2877 3056 5.074115 CCGCCTAATTTCCCATATAAACCA 58.926 41.667 0.00 0.00 0.00 3.67
3195 3426 4.946160 TCTTCTTCCTCCTCTCTCTCTT 57.054 45.455 0.00 0.00 0.00 2.85
3256 3487 1.524863 CCTCCGTCGTCCTCAACTGT 61.525 60.000 0.00 0.00 0.00 3.55
3487 3741 2.351097 CAACACACACGCACGCTG 60.351 61.111 0.00 0.00 0.00 5.18
3504 3805 0.962356 CTGAAGCATCGGCCTTGGTT 60.962 55.000 16.91 16.91 42.56 3.67
3517 3818 1.429463 CTTGGTTCGAGCTACCACAC 58.571 55.000 6.33 0.00 45.00 3.82
3896 4208 2.154462 CAAGGTGTTCGAGGAAATGCT 58.846 47.619 0.00 0.00 0.00 3.79
3902 4221 4.495422 GTGTTCGAGGAAATGCTAGAGAA 58.505 43.478 0.00 0.00 0.00 2.87
3911 4230 4.407296 GGAAATGCTAGAGAAAGGAGGAGA 59.593 45.833 0.00 0.00 0.00 3.71
4031 4350 4.796495 GGTGGGTCCCGCATGTCC 62.796 72.222 23.12 1.21 35.42 4.02
4032 4351 4.796495 GTGGGTCCCGCATGTCCC 62.796 72.222 17.13 0.16 40.26 4.46
4281 4646 3.782443 GGGATGCGGACGGACCTT 61.782 66.667 0.00 0.00 36.31 3.50
4470 4835 3.587061 TCACCAACATACTCAGGGATGTT 59.413 43.478 1.22 1.22 45.03 2.71
4485 4850 3.055094 GGGATGTTGGAGAAGAGTAAGCA 60.055 47.826 0.00 0.00 0.00 3.91
4527 5580 1.117994 TGCAGTGCAATGGTTTTCCA 58.882 45.000 17.26 0.75 43.96 3.53
4544 5605 8.465999 TGGTTTTCCATTGTACAATCATGATAC 58.534 33.333 18.25 13.90 46.22 2.24
4595 5656 9.844257 TGAATTTTCTGGTGTTTGGAATAATTT 57.156 25.926 0.00 0.00 0.00 1.82
4612 5677 3.025924 TTGCAGTGCAAGAAGAGGG 57.974 52.632 26.36 0.00 43.99 4.30
4627 5692 5.165652 AGAAGAGGGAGGATATATTTGCCA 58.834 41.667 10.10 0.00 0.00 4.92
5247 6628 1.005037 TGTCGCGACATCTGCCTTT 60.005 52.632 36.40 0.00 36.21 3.11
5254 6635 1.377536 GACATCTGCCTTTGAGCTCC 58.622 55.000 12.15 0.00 0.00 4.70
5316 6716 4.768448 ACATTCCTCTGCAATCAATGTTGA 59.232 37.500 7.00 0.00 42.14 3.18
5327 6727 6.089920 CAATCAATGTTGAATGCATGACAC 57.910 37.500 0.00 0.00 41.13 3.67
5367 6767 1.612726 GGAGAAGAACACTGCAGCCAT 60.613 52.381 15.27 0.00 0.00 4.40
5427 6827 2.223144 TGCTAGAACATGTGCGTTTGAC 59.777 45.455 0.00 0.00 0.00 3.18
5472 6872 2.224209 ACTCGTTGTCGGTCCTGAATTT 60.224 45.455 0.00 0.00 37.69 1.82
5572 6972 5.469084 ACGCTGTTTCTAAACTTTAGAAGGG 59.531 40.000 18.92 17.73 39.59 3.95
5594 6994 0.753479 TGCCGCTCAAAGGAAACCAA 60.753 50.000 0.00 0.00 0.00 3.67
5596 6996 1.402852 GCCGCTCAAAGGAAACCAATC 60.403 52.381 0.00 0.00 0.00 2.67
5614 8477 5.697633 ACCAATCATGCAAGACATTGAAAAC 59.302 36.000 6.81 0.00 38.83 2.43
5621 10417 7.434897 TCATGCAAGACATTGAAAACTTAACAC 59.565 33.333 0.00 0.00 38.83 3.32
5714 10510 4.353737 TCGATTTATGATTGCAGCTTTGC 58.646 39.130 0.00 0.00 0.00 3.68
5734 10530 0.990818 AGGAAGGGGAGAGGAATGGC 60.991 60.000 0.00 0.00 0.00 4.40
5922 10720 6.730960 AGCATTCATAATTTTTGTTGCAGG 57.269 33.333 14.46 0.00 31.39 4.85
5923 10721 5.644636 AGCATTCATAATTTTTGTTGCAGGG 59.355 36.000 14.46 0.00 31.39 4.45
5924 10722 5.642919 GCATTCATAATTTTTGTTGCAGGGA 59.357 36.000 10.25 0.00 0.00 4.20
5925 10723 6.149142 GCATTCATAATTTTTGTTGCAGGGAA 59.851 34.615 10.25 0.00 0.00 3.97
5926 10724 7.148205 GCATTCATAATTTTTGTTGCAGGGAAT 60.148 33.333 10.25 0.00 0.00 3.01
5927 10725 8.732531 CATTCATAATTTTTGTTGCAGGGAATT 58.267 29.630 0.00 0.00 0.00 2.17
5928 10726 9.956640 ATTCATAATTTTTGTTGCAGGGAATTA 57.043 25.926 0.00 0.00 0.00 1.40
5929 10727 9.956640 TTCATAATTTTTGTTGCAGGGAATTAT 57.043 25.926 0.00 0.00 32.74 1.28
5930 10728 9.956640 TCATAATTTTTGTTGCAGGGAATTATT 57.043 25.926 10.35 0.00 31.12 1.40
5943 10741 9.639563 TGCAGGGAATTATTATTATTTGAGACA 57.360 29.630 0.00 0.00 0.00 3.41
5956 10754 4.979943 TTTGAGACAATGTTGTGCTGAA 57.020 36.364 2.65 0.00 42.43 3.02
5957 10755 5.518848 TTTGAGACAATGTTGTGCTGAAT 57.481 34.783 2.65 0.00 42.43 2.57
5959 10757 6.822667 TTGAGACAATGTTGTGCTGAATAT 57.177 33.333 2.65 0.00 42.43 1.28
5985 10783 4.526970 TGATGATGTTTCTTAGGGAAGGC 58.473 43.478 0.00 0.00 35.16 4.35
5986 10784 3.366052 TGATGTTTCTTAGGGAAGGCC 57.634 47.619 0.00 0.00 35.16 5.19
6000 10798 2.644676 GAAGGCCCTATTTGACACTCC 58.355 52.381 0.00 0.00 0.00 3.85
6001 10799 0.541863 AGGCCCTATTTGACACTCCG 59.458 55.000 0.00 0.00 0.00 4.63
6002 10800 1.095807 GGCCCTATTTGACACTCCGC 61.096 60.000 0.00 0.00 0.00 5.54
6003 10801 1.095807 GCCCTATTTGACACTCCGCC 61.096 60.000 0.00 0.00 0.00 6.13
6004 10802 0.251916 CCCTATTTGACACTCCGCCA 59.748 55.000 0.00 0.00 0.00 5.69
6005 10803 1.339631 CCCTATTTGACACTCCGCCAA 60.340 52.381 0.00 0.00 0.00 4.52
6006 10804 2.643551 CCTATTTGACACTCCGCCAAT 58.356 47.619 0.00 0.00 0.00 3.16
6007 10805 2.614057 CCTATTTGACACTCCGCCAATC 59.386 50.000 0.00 0.00 0.00 2.67
6008 10806 2.198827 ATTTGACACTCCGCCAATCA 57.801 45.000 0.00 0.00 0.00 2.57
6009 10807 1.522668 TTTGACACTCCGCCAATCAG 58.477 50.000 0.00 0.00 0.00 2.90
6010 10808 0.955428 TTGACACTCCGCCAATCAGC 60.955 55.000 0.00 0.00 0.00 4.26
6011 10809 1.375908 GACACTCCGCCAATCAGCA 60.376 57.895 0.00 0.00 0.00 4.41
6012 10810 1.639298 GACACTCCGCCAATCAGCAC 61.639 60.000 0.00 0.00 0.00 4.40
6013 10811 1.672030 CACTCCGCCAATCAGCACA 60.672 57.895 0.00 0.00 0.00 4.57
6014 10812 1.073025 ACTCCGCCAATCAGCACAA 59.927 52.632 0.00 0.00 0.00 3.33
6015 10813 0.957395 ACTCCGCCAATCAGCACAAG 60.957 55.000 0.00 0.00 0.00 3.16
6016 10814 0.957395 CTCCGCCAATCAGCACAAGT 60.957 55.000 0.00 0.00 0.00 3.16
6017 10815 0.537143 TCCGCCAATCAGCACAAGTT 60.537 50.000 0.00 0.00 0.00 2.66
6018 10816 0.314935 CCGCCAATCAGCACAAGTTT 59.685 50.000 0.00 0.00 0.00 2.66
6019 10817 1.666888 CCGCCAATCAGCACAAGTTTC 60.667 52.381 0.00 0.00 0.00 2.78
6020 10818 1.689959 GCCAATCAGCACAAGTTTCG 58.310 50.000 0.00 0.00 0.00 3.46
6021 10819 1.689959 CCAATCAGCACAAGTTTCGC 58.310 50.000 0.00 0.00 0.00 4.70
6022 10820 1.267806 CCAATCAGCACAAGTTTCGCT 59.732 47.619 0.00 0.00 36.10 4.93
6023 10821 2.578495 CAATCAGCACAAGTTTCGCTC 58.422 47.619 0.00 0.00 32.48 5.03
6024 10822 0.792640 ATCAGCACAAGTTTCGCTCG 59.207 50.000 0.00 0.00 32.48 5.03
6025 10823 1.205064 CAGCACAAGTTTCGCTCGG 59.795 57.895 0.00 0.00 32.48 4.63
6026 10824 1.961277 AGCACAAGTTTCGCTCGGG 60.961 57.895 0.00 0.00 0.00 5.14
6027 10825 2.251642 GCACAAGTTTCGCTCGGGT 61.252 57.895 0.00 0.00 0.00 5.28
6028 10826 0.947180 GCACAAGTTTCGCTCGGGTA 60.947 55.000 0.00 0.00 0.00 3.69
6029 10827 1.068474 CACAAGTTTCGCTCGGGTAG 58.932 55.000 0.00 0.00 0.00 3.18
6030 10828 0.037605 ACAAGTTTCGCTCGGGTAGG 60.038 55.000 0.00 0.00 0.00 3.18
6031 10829 1.079336 AAGTTTCGCTCGGGTAGGC 60.079 57.895 0.00 0.00 0.00 3.93
6032 10830 2.510918 GTTTCGCTCGGGTAGGCC 60.511 66.667 0.00 0.00 0.00 5.19
6033 10831 4.137872 TTTCGCTCGGGTAGGCCG 62.138 66.667 0.00 0.00 34.97 6.13
6043 10841 4.256180 GTAGGCCGGCCCATGGAG 62.256 72.222 41.72 4.39 36.58 3.86
6048 10846 4.738998 CCGGCCCATGGAGCAACA 62.739 66.667 15.22 0.00 0.00 3.33
6049 10847 3.443045 CGGCCCATGGAGCAACAC 61.443 66.667 15.22 1.49 0.00 3.32
6050 10848 2.283101 GGCCCATGGAGCAACACA 60.283 61.111 15.22 0.00 0.00 3.72
6051 10849 1.683365 GGCCCATGGAGCAACACAT 60.683 57.895 15.22 0.00 0.00 3.21
6052 10850 0.395586 GGCCCATGGAGCAACACATA 60.396 55.000 15.22 0.00 0.00 2.29
6053 10851 1.027357 GCCCATGGAGCAACACATAG 58.973 55.000 15.22 0.00 0.00 2.23
6054 10852 1.683011 GCCCATGGAGCAACACATAGT 60.683 52.381 15.22 0.00 0.00 2.12
6055 10853 2.292267 CCCATGGAGCAACACATAGTC 58.708 52.381 15.22 0.00 0.00 2.59
6056 10854 1.935873 CCATGGAGCAACACATAGTCG 59.064 52.381 5.56 0.00 0.00 4.18
6057 10855 1.328680 CATGGAGCAACACATAGTCGC 59.671 52.381 0.00 0.00 0.00 5.19
6058 10856 0.735978 TGGAGCAACACATAGTCGCG 60.736 55.000 0.00 0.00 0.00 5.87
6059 10857 0.457853 GGAGCAACACATAGTCGCGA 60.458 55.000 3.71 3.71 0.00 5.87
6060 10858 0.917259 GAGCAACACATAGTCGCGAG 59.083 55.000 10.24 0.00 0.00 5.03
6061 10859 1.078759 AGCAACACATAGTCGCGAGC 61.079 55.000 10.24 5.99 0.00 5.03
6062 10860 1.625870 CAACACATAGTCGCGAGCG 59.374 57.895 10.24 11.64 41.35 5.03
6063 10861 0.796870 CAACACATAGTCGCGAGCGA 60.797 55.000 16.64 16.64 46.87 4.93
6071 10869 3.943034 TCGCGAGCGAGCTCTAGC 61.943 66.667 20.97 16.59 44.01 3.42
6103 10901 8.499403 TTTTTATTTTCCTCTGTTTTTGTGGG 57.501 30.769 0.00 0.00 0.00 4.61
6104 10902 4.687901 ATTTTCCTCTGTTTTTGTGGGG 57.312 40.909 0.00 0.00 0.00 4.96
6105 10903 2.838637 TTCCTCTGTTTTTGTGGGGT 57.161 45.000 0.00 0.00 0.00 4.95
6106 10904 2.838637 TCCTCTGTTTTTGTGGGGTT 57.161 45.000 0.00 0.00 0.00 4.11
6107 10905 3.108847 TCCTCTGTTTTTGTGGGGTTT 57.891 42.857 0.00 0.00 0.00 3.27
6108 10906 3.445987 TCCTCTGTTTTTGTGGGGTTTT 58.554 40.909 0.00 0.00 0.00 2.43
6109 10907 4.611367 TCCTCTGTTTTTGTGGGGTTTTA 58.389 39.130 0.00 0.00 0.00 1.52
6110 10908 5.024118 TCCTCTGTTTTTGTGGGGTTTTAA 58.976 37.500 0.00 0.00 0.00 1.52
6111 10909 5.663556 TCCTCTGTTTTTGTGGGGTTTTAAT 59.336 36.000 0.00 0.00 0.00 1.40
6112 10910 6.157123 TCCTCTGTTTTTGTGGGGTTTTAATT 59.843 34.615 0.00 0.00 0.00 1.40
6113 10911 6.826231 CCTCTGTTTTTGTGGGGTTTTAATTT 59.174 34.615 0.00 0.00 0.00 1.82
6114 10912 7.338196 CCTCTGTTTTTGTGGGGTTTTAATTTT 59.662 33.333 0.00 0.00 0.00 1.82
6115 10913 8.270080 TCTGTTTTTGTGGGGTTTTAATTTTC 57.730 30.769 0.00 0.00 0.00 2.29
6116 10914 7.883311 TCTGTTTTTGTGGGGTTTTAATTTTCA 59.117 29.630 0.00 0.00 0.00 2.69
6117 10915 8.581253 TGTTTTTGTGGGGTTTTAATTTTCAT 57.419 26.923 0.00 0.00 0.00 2.57
6118 10916 9.025041 TGTTTTTGTGGGGTTTTAATTTTCATT 57.975 25.926 0.00 0.00 0.00 2.57
6119 10917 9.862371 GTTTTTGTGGGGTTTTAATTTTCATTT 57.138 25.926 0.00 0.00 0.00 2.32
6122 10920 9.467796 TTTGTGGGGTTTTAATTTTCATTTTCT 57.532 25.926 0.00 0.00 0.00 2.52
6124 10922 9.771534 TGTGGGGTTTTAATTTTCATTTTCTAG 57.228 29.630 0.00 0.00 0.00 2.43
6125 10923 9.990360 GTGGGGTTTTAATTTTCATTTTCTAGA 57.010 29.630 0.00 0.00 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.388024 TGTACTGACAGAACCTTCTTGCT 59.612 43.478 10.08 0.00 34.74 3.91
1 2 3.728845 TGTACTGACAGAACCTTCTTGC 58.271 45.455 10.08 0.00 34.74 4.01
13 14 7.364408 GGAGTACCATATTTTCCTGTACTGACA 60.364 40.741 5.44 0.00 41.46 3.58
14 15 6.985059 GGAGTACCATATTTTCCTGTACTGAC 59.015 42.308 5.44 0.00 41.46 3.51
15 16 6.099269 GGGAGTACCATATTTTCCTGTACTGA 59.901 42.308 5.44 0.00 41.46 3.41
16 17 6.099845 AGGGAGTACCATATTTTCCTGTACTG 59.900 42.308 5.44 0.00 41.46 2.74
17 18 6.210522 AGGGAGTACCATATTTTCCTGTACT 58.789 40.000 0.00 0.00 43.42 2.73
18 19 6.464039 GGAGGGAGTACCATATTTTCCTGTAC 60.464 46.154 0.00 0.00 43.89 2.90
19 20 5.605488 GGAGGGAGTACCATATTTTCCTGTA 59.395 44.000 0.00 0.00 43.89 2.74
20 21 4.412528 GGAGGGAGTACCATATTTTCCTGT 59.587 45.833 0.00 0.00 43.89 4.00
21 22 4.503296 CGGAGGGAGTACCATATTTTCCTG 60.503 50.000 0.00 0.00 43.89 3.86
22 23 3.646637 CGGAGGGAGTACCATATTTTCCT 59.353 47.826 0.00 0.00 43.89 3.36
23 24 3.644738 TCGGAGGGAGTACCATATTTTCC 59.355 47.826 0.00 0.00 43.89 3.13
24 25 4.950205 TCGGAGGGAGTACCATATTTTC 57.050 45.455 0.00 0.00 43.89 2.29
25 26 4.286291 GGATCGGAGGGAGTACCATATTTT 59.714 45.833 0.00 0.00 43.89 1.82
26 27 3.838903 GGATCGGAGGGAGTACCATATTT 59.161 47.826 0.00 0.00 43.89 1.40
27 28 3.181410 TGGATCGGAGGGAGTACCATATT 60.181 47.826 0.00 0.00 43.89 1.28
28 29 2.382305 TGGATCGGAGGGAGTACCATAT 59.618 50.000 0.00 0.00 43.89 1.78
29 30 1.784593 TGGATCGGAGGGAGTACCATA 59.215 52.381 0.00 0.00 43.89 2.74
30 31 0.561184 TGGATCGGAGGGAGTACCAT 59.439 55.000 0.00 0.00 43.89 3.55
31 32 0.561184 ATGGATCGGAGGGAGTACCA 59.439 55.000 0.00 0.00 43.89 3.25
32 33 2.599408 TATGGATCGGAGGGAGTACC 57.401 55.000 0.00 0.00 40.67 3.34
33 34 5.262804 AGTAATATGGATCGGAGGGAGTAC 58.737 45.833 0.00 0.00 0.00 2.73
34 35 5.531753 AGTAATATGGATCGGAGGGAGTA 57.468 43.478 0.00 0.00 0.00 2.59
35 36 4.405756 AGTAATATGGATCGGAGGGAGT 57.594 45.455 0.00 0.00 0.00 3.85
36 37 4.621747 GCAAGTAATATGGATCGGAGGGAG 60.622 50.000 0.00 0.00 0.00 4.30
37 38 3.260884 GCAAGTAATATGGATCGGAGGGA 59.739 47.826 0.00 0.00 0.00 4.20
38 39 3.007940 TGCAAGTAATATGGATCGGAGGG 59.992 47.826 0.00 0.00 0.00 4.30
39 40 4.271696 TGCAAGTAATATGGATCGGAGG 57.728 45.455 0.00 0.00 0.00 4.30
40 41 5.934043 TGAATGCAAGTAATATGGATCGGAG 59.066 40.000 0.00 0.00 0.00 4.63
41 42 5.863965 TGAATGCAAGTAATATGGATCGGA 58.136 37.500 0.00 0.00 0.00 4.55
42 43 6.558771 TTGAATGCAAGTAATATGGATCGG 57.441 37.500 0.00 0.00 0.00 4.18
43 44 6.574832 CGTTTGAATGCAAGTAATATGGATCG 59.425 38.462 0.00 0.00 35.04 3.69
44 45 6.857964 CCGTTTGAATGCAAGTAATATGGATC 59.142 38.462 0.00 0.00 35.04 3.36
45 46 6.545666 TCCGTTTGAATGCAAGTAATATGGAT 59.454 34.615 0.00 0.00 35.04 3.41
46 47 5.883115 TCCGTTTGAATGCAAGTAATATGGA 59.117 36.000 0.00 0.00 35.04 3.41
47 48 6.130298 TCCGTTTGAATGCAAGTAATATGG 57.870 37.500 0.00 0.00 35.04 2.74
48 49 7.195646 ACATCCGTTTGAATGCAAGTAATATG 58.804 34.615 0.00 0.00 35.04 1.78
49 50 7.333528 ACATCCGTTTGAATGCAAGTAATAT 57.666 32.000 0.00 0.00 35.04 1.28
50 51 6.751514 ACATCCGTTTGAATGCAAGTAATA 57.248 33.333 0.00 0.00 35.04 0.98
51 52 5.643379 ACATCCGTTTGAATGCAAGTAAT 57.357 34.783 0.00 0.00 35.04 1.89
52 53 6.751514 ATACATCCGTTTGAATGCAAGTAA 57.248 33.333 0.00 0.00 35.04 2.24
53 54 6.751514 AATACATCCGTTTGAATGCAAGTA 57.248 33.333 0.00 0.00 35.04 2.24
54 55 5.643379 AATACATCCGTTTGAATGCAAGT 57.357 34.783 0.00 0.00 35.04 3.16
55 56 8.633075 ATTAAATACATCCGTTTGAATGCAAG 57.367 30.769 0.00 0.00 35.04 4.01
56 57 9.509855 GTATTAAATACATCCGTTTGAATGCAA 57.490 29.630 0.00 0.00 35.81 4.08
57 58 8.898761 AGTATTAAATACATCCGTTTGAATGCA 58.101 29.630 0.00 0.00 38.21 3.96
58 59 9.169468 CAGTATTAAATACATCCGTTTGAATGC 57.831 33.333 0.00 0.00 38.21 3.56
87 88 9.720874 TGCTGAAATGGAGGTATCTAGATATAT 57.279 33.333 15.43 7.45 0.00 0.86
88 89 9.547279 TTGCTGAAATGGAGGTATCTAGATATA 57.453 33.333 15.43 0.00 0.00 0.86
89 90 8.441311 TTGCTGAAATGGAGGTATCTAGATAT 57.559 34.615 15.43 0.55 0.00 1.63
90 91 7.855784 TTGCTGAAATGGAGGTATCTAGATA 57.144 36.000 8.44 8.44 0.00 1.98
91 92 6.753913 TTGCTGAAATGGAGGTATCTAGAT 57.246 37.500 10.73 10.73 0.00 1.98
92 93 6.753913 ATTGCTGAAATGGAGGTATCTAGA 57.246 37.500 0.00 0.00 0.00 2.43
93 94 8.153550 ACTTATTGCTGAAATGGAGGTATCTAG 58.846 37.037 0.00 0.00 0.00 2.43
94 95 8.034313 ACTTATTGCTGAAATGGAGGTATCTA 57.966 34.615 0.00 0.00 0.00 1.98
95 96 6.904626 ACTTATTGCTGAAATGGAGGTATCT 58.095 36.000 0.00 0.00 0.00 1.98
96 97 8.677148 TTACTTATTGCTGAAATGGAGGTATC 57.323 34.615 0.00 0.00 0.00 2.24
99 100 9.646522 AATATTACTTATTGCTGAAATGGAGGT 57.353 29.630 0.00 0.00 0.00 3.85
108 109 9.653287 CCTCCGATTAATATTACTTATTGCTGA 57.347 33.333 0.00 0.00 32.66 4.26
109 110 8.883731 CCCTCCGATTAATATTACTTATTGCTG 58.116 37.037 0.00 0.00 32.66 4.41
110 111 8.822805 TCCCTCCGATTAATATTACTTATTGCT 58.177 33.333 0.00 0.00 32.66 3.91
111 112 9.099454 CTCCCTCCGATTAATATTACTTATTGC 57.901 37.037 0.00 0.00 32.66 3.56
116 117 9.151177 TGTTACTCCCTCCGATTAATATTACTT 57.849 33.333 0.00 0.00 0.00 2.24
117 118 8.583296 GTGTTACTCCCTCCGATTAATATTACT 58.417 37.037 0.00 0.00 0.00 2.24
118 119 8.362639 TGTGTTACTCCCTCCGATTAATATTAC 58.637 37.037 0.00 0.00 0.00 1.89
119 120 8.481492 TGTGTTACTCCCTCCGATTAATATTA 57.519 34.615 0.00 0.00 0.00 0.98
120 121 7.369551 TGTGTTACTCCCTCCGATTAATATT 57.630 36.000 0.00 0.00 0.00 1.28
121 122 6.989155 TGTGTTACTCCCTCCGATTAATAT 57.011 37.500 0.00 0.00 0.00 1.28
122 123 6.795144 TTGTGTTACTCCCTCCGATTAATA 57.205 37.500 0.00 0.00 0.00 0.98
123 124 5.687166 TTGTGTTACTCCCTCCGATTAAT 57.313 39.130 0.00 0.00 0.00 1.40
124 125 5.240121 GTTTGTGTTACTCCCTCCGATTAA 58.760 41.667 0.00 0.00 0.00 1.40
125 126 4.322953 GGTTTGTGTTACTCCCTCCGATTA 60.323 45.833 0.00 0.00 0.00 1.75
126 127 3.558533 GGTTTGTGTTACTCCCTCCGATT 60.559 47.826 0.00 0.00 0.00 3.34
127 128 2.027469 GGTTTGTGTTACTCCCTCCGAT 60.027 50.000 0.00 0.00 0.00 4.18
128 129 1.345415 GGTTTGTGTTACTCCCTCCGA 59.655 52.381 0.00 0.00 0.00 4.55
129 130 1.346722 AGGTTTGTGTTACTCCCTCCG 59.653 52.381 0.00 0.00 0.00 4.63
130 131 2.370849 TCAGGTTTGTGTTACTCCCTCC 59.629 50.000 0.00 0.00 0.00 4.30
131 132 3.764237 TCAGGTTTGTGTTACTCCCTC 57.236 47.619 0.00 0.00 0.00 4.30
132 133 5.726793 AGATATCAGGTTTGTGTTACTCCCT 59.273 40.000 5.32 0.00 0.00 4.20
133 134 5.817816 CAGATATCAGGTTTGTGTTACTCCC 59.182 44.000 5.32 0.00 0.00 4.30
134 135 6.640518 TCAGATATCAGGTTTGTGTTACTCC 58.359 40.000 5.32 0.00 0.00 3.85
135 136 8.607459 CATTCAGATATCAGGTTTGTGTTACTC 58.393 37.037 5.32 0.00 0.00 2.59
136 137 7.066284 GCATTCAGATATCAGGTTTGTGTTACT 59.934 37.037 5.32 0.00 0.00 2.24
137 138 7.066284 AGCATTCAGATATCAGGTTTGTGTTAC 59.934 37.037 5.32 0.00 0.00 2.50
138 139 7.112122 AGCATTCAGATATCAGGTTTGTGTTA 58.888 34.615 5.32 0.00 0.00 2.41
139 140 5.948162 AGCATTCAGATATCAGGTTTGTGTT 59.052 36.000 5.32 0.00 0.00 3.32
140 141 5.503927 AGCATTCAGATATCAGGTTTGTGT 58.496 37.500 5.32 0.00 0.00 3.72
141 142 6.017605 GGTAGCATTCAGATATCAGGTTTGTG 60.018 42.308 5.32 0.00 0.00 3.33
142 143 6.058183 GGTAGCATTCAGATATCAGGTTTGT 58.942 40.000 5.32 0.00 0.00 2.83
143 144 6.017605 GTGGTAGCATTCAGATATCAGGTTTG 60.018 42.308 5.32 0.00 28.08 2.93
144 145 6.058183 GTGGTAGCATTCAGATATCAGGTTT 58.942 40.000 5.32 0.00 28.08 3.27
145 146 5.130975 TGTGGTAGCATTCAGATATCAGGTT 59.869 40.000 5.32 0.00 28.08 3.50
146 147 4.655649 TGTGGTAGCATTCAGATATCAGGT 59.344 41.667 5.32 0.00 28.08 4.00
147 148 4.993584 GTGTGGTAGCATTCAGATATCAGG 59.006 45.833 5.32 0.00 28.08 3.86
148 149 5.464722 GTGTGTGGTAGCATTCAGATATCAG 59.535 44.000 5.32 0.00 28.08 2.90
149 150 5.104982 TGTGTGTGGTAGCATTCAGATATCA 60.105 40.000 5.32 0.00 0.00 2.15
150 151 5.235186 GTGTGTGTGGTAGCATTCAGATATC 59.765 44.000 0.00 0.00 0.00 1.63
151 152 5.104776 AGTGTGTGTGGTAGCATTCAGATAT 60.105 40.000 0.00 0.00 0.00 1.63
152 153 4.222810 AGTGTGTGTGGTAGCATTCAGATA 59.777 41.667 0.00 0.00 0.00 1.98
153 154 3.008375 AGTGTGTGTGGTAGCATTCAGAT 59.992 43.478 0.00 0.00 0.00 2.90
154 155 2.368548 AGTGTGTGTGGTAGCATTCAGA 59.631 45.455 0.00 0.00 0.00 3.27
155 156 2.481568 CAGTGTGTGTGGTAGCATTCAG 59.518 50.000 0.00 0.00 0.00 3.02
156 157 2.493035 CAGTGTGTGTGGTAGCATTCA 58.507 47.619 0.00 0.00 0.00 2.57
157 158 1.806542 CCAGTGTGTGTGGTAGCATTC 59.193 52.381 0.00 0.00 0.00 2.67
158 159 1.545428 CCCAGTGTGTGTGGTAGCATT 60.545 52.381 0.00 0.00 32.62 3.56
159 160 0.036732 CCCAGTGTGTGTGGTAGCAT 59.963 55.000 0.00 0.00 32.62 3.79
160 161 1.051556 TCCCAGTGTGTGTGGTAGCA 61.052 55.000 0.00 0.00 32.62 3.49
161 162 0.602905 GTCCCAGTGTGTGTGGTAGC 60.603 60.000 0.00 0.00 32.62 3.58
162 163 0.756294 TGTCCCAGTGTGTGTGGTAG 59.244 55.000 0.00 0.00 32.62 3.18
163 164 0.756294 CTGTCCCAGTGTGTGTGGTA 59.244 55.000 0.00 0.00 32.62 3.25
164 165 1.526887 CTGTCCCAGTGTGTGTGGT 59.473 57.895 0.00 0.00 32.62 4.16
165 166 1.893808 GCTGTCCCAGTGTGTGTGG 60.894 63.158 0.00 0.00 33.43 4.17
166 167 0.747644 TTGCTGTCCCAGTGTGTGTG 60.748 55.000 0.00 0.00 33.43 3.82
167 168 0.464373 CTTGCTGTCCCAGTGTGTGT 60.464 55.000 0.00 0.00 33.43 3.72
168 169 1.789078 GCTTGCTGTCCCAGTGTGTG 61.789 60.000 0.00 0.00 33.43 3.82
169 170 1.526917 GCTTGCTGTCCCAGTGTGT 60.527 57.895 0.00 0.00 33.43 3.72
170 171 2.263741 GGCTTGCTGTCCCAGTGTG 61.264 63.158 0.00 0.00 33.43 3.82
171 172 2.113986 GGCTTGCTGTCCCAGTGT 59.886 61.111 0.00 0.00 33.43 3.55
172 173 1.529010 TTGGCTTGCTGTCCCAGTG 60.529 57.895 0.00 0.00 33.43 3.66
173 174 1.529244 GTTGGCTTGCTGTCCCAGT 60.529 57.895 0.00 0.00 33.43 4.00
174 175 1.521450 CTGTTGGCTTGCTGTCCCAG 61.521 60.000 0.00 0.00 34.12 4.45
175 176 1.529010 CTGTTGGCTTGCTGTCCCA 60.529 57.895 0.00 0.00 0.00 4.37
176 177 0.823356 TTCTGTTGGCTTGCTGTCCC 60.823 55.000 0.00 0.00 0.00 4.46
177 178 0.595095 CTTCTGTTGGCTTGCTGTCC 59.405 55.000 0.00 0.00 0.00 4.02
178 179 1.002033 CACTTCTGTTGGCTTGCTGTC 60.002 52.381 0.00 0.00 0.00 3.51
179 180 1.027357 CACTTCTGTTGGCTTGCTGT 58.973 50.000 0.00 0.00 0.00 4.40
180 181 0.313043 CCACTTCTGTTGGCTTGCTG 59.687 55.000 0.00 0.00 0.00 4.41
181 182 0.183492 TCCACTTCTGTTGGCTTGCT 59.817 50.000 0.00 0.00 0.00 3.91
182 183 0.595095 CTCCACTTCTGTTGGCTTGC 59.405 55.000 0.00 0.00 0.00 4.01
183 184 1.242076 CCTCCACTTCTGTTGGCTTG 58.758 55.000 0.00 0.00 0.00 4.01
184 185 0.538287 GCCTCCACTTCTGTTGGCTT 60.538 55.000 0.00 0.00 37.58 4.35
185 186 1.073897 GCCTCCACTTCTGTTGGCT 59.926 57.895 0.00 0.00 37.58 4.75
186 187 1.228245 TGCCTCCACTTCTGTTGGC 60.228 57.895 0.00 0.00 40.62 4.52
187 188 0.607489 CCTGCCTCCACTTCTGTTGG 60.607 60.000 0.00 0.00 0.00 3.77
188 189 0.607489 CCCTGCCTCCACTTCTGTTG 60.607 60.000 0.00 0.00 0.00 3.33
189 190 0.768221 TCCCTGCCTCCACTTCTGTT 60.768 55.000 0.00 0.00 0.00 3.16
190 191 0.768221 TTCCCTGCCTCCACTTCTGT 60.768 55.000 0.00 0.00 0.00 3.41
191 192 0.622665 ATTCCCTGCCTCCACTTCTG 59.377 55.000 0.00 0.00 0.00 3.02
192 193 0.622665 CATTCCCTGCCTCCACTTCT 59.377 55.000 0.00 0.00 0.00 2.85
193 194 1.034292 GCATTCCCTGCCTCCACTTC 61.034 60.000 0.00 0.00 45.66 3.01
194 195 1.000396 GCATTCCCTGCCTCCACTT 60.000 57.895 0.00 0.00 45.66 3.16
195 196 2.679716 GCATTCCCTGCCTCCACT 59.320 61.111 0.00 0.00 45.66 4.00
249 258 1.552348 GAATCCGGCTCGCTTCGATG 61.552 60.000 0.00 0.00 34.61 3.84
250 259 1.300233 GAATCCGGCTCGCTTCGAT 60.300 57.895 0.00 0.00 34.61 3.59
251 260 2.104331 GAATCCGGCTCGCTTCGA 59.896 61.111 0.00 0.00 0.00 3.71
252 261 3.323136 CGAATCCGGCTCGCTTCG 61.323 66.667 12.03 9.79 35.54 3.79
253 262 2.202756 ACGAATCCGGCTCGCTTC 60.203 61.111 21.35 7.75 39.97 3.86
254 263 2.202756 GACGAATCCGGCTCGCTT 60.203 61.111 21.35 7.05 41.56 4.68
255 264 4.208686 GGACGAATCCGGCTCGCT 62.209 66.667 21.35 11.43 44.92 4.93
331 340 2.308866 GGGATAGGGTTATCACATGGGG 59.691 54.545 0.00 0.00 39.16 4.96
389 402 0.319405 CTTGCTCTTTGCCTTTGGGG 59.681 55.000 0.00 0.00 42.00 4.96
394 407 1.612463 CTCTTGCTTGCTCTTTGCCTT 59.388 47.619 0.00 0.00 42.00 4.35
395 408 1.245732 CTCTTGCTTGCTCTTTGCCT 58.754 50.000 0.00 0.00 42.00 4.75
396 409 0.243095 CCTCTTGCTTGCTCTTTGCC 59.757 55.000 0.00 0.00 42.00 4.52
397 410 1.068679 GTCCTCTTGCTTGCTCTTTGC 60.069 52.381 0.00 0.00 43.25 3.68
398 411 2.031333 GTGTCCTCTTGCTTGCTCTTTG 60.031 50.000 0.00 0.00 0.00 2.77
405 459 1.517242 GTCCAGTGTCCTCTTGCTTG 58.483 55.000 0.00 0.00 0.00 4.01
497 579 2.287849 GCTGAGAGTGAGCGCATGTATA 60.288 50.000 11.47 0.00 0.00 1.47
597 683 2.509569 CAAGCTCGATCCCTCTAGCTA 58.490 52.381 2.55 0.00 46.60 3.32
599 685 0.319469 GCAAGCTCGATCCCTCTAGC 60.319 60.000 0.00 0.00 39.79 3.42
600 686 1.000385 CTGCAAGCTCGATCCCTCTAG 60.000 57.143 0.00 0.00 0.00 2.43
625 711 1.278985 CACCTCTTATCAGCACCACCA 59.721 52.381 0.00 0.00 0.00 4.17
626 712 1.555075 TCACCTCTTATCAGCACCACC 59.445 52.381 0.00 0.00 0.00 4.61
627 713 2.234908 ACTCACCTCTTATCAGCACCAC 59.765 50.000 0.00 0.00 0.00 4.16
628 714 2.234661 CACTCACCTCTTATCAGCACCA 59.765 50.000 0.00 0.00 0.00 4.17
629 715 2.419297 CCACTCACCTCTTATCAGCACC 60.419 54.545 0.00 0.00 0.00 5.01
745 836 1.000496 GCACCCCTGCGTATACTACTC 60.000 57.143 0.56 0.00 32.44 2.59
747 838 0.033090 GGCACCCCTGCGTATACTAC 59.967 60.000 0.56 0.00 45.31 2.73
748 839 2.433217 GGCACCCCTGCGTATACTA 58.567 57.895 0.56 0.00 45.31 1.82
749 840 3.227250 GGCACCCCTGCGTATACT 58.773 61.111 0.56 0.00 45.31 2.12
813 904 2.375766 CGCTCTTGGACACACGCTC 61.376 63.158 0.00 0.00 0.00 5.03
822 913 2.351276 GGGAAAGGCGCTCTTGGA 59.649 61.111 7.64 0.00 35.55 3.53
823 914 2.751837 GGGGAAAGGCGCTCTTGG 60.752 66.667 7.64 0.00 35.55 3.61
824 915 2.751837 GGGGGAAAGGCGCTCTTG 60.752 66.667 7.64 0.00 35.55 3.02
871 965 2.969238 GTGATGAGCGGGCGGATG 60.969 66.667 0.00 0.00 0.00 3.51
872 966 3.469970 TGTGATGAGCGGGCGGAT 61.470 61.111 0.00 0.00 0.00 4.18
873 967 4.451150 GTGTGATGAGCGGGCGGA 62.451 66.667 0.00 0.00 0.00 5.54
879 973 3.842126 CGCACCGTGTGATGAGCG 61.842 66.667 6.18 0.00 35.23 5.03
880 974 2.738521 ACGCACCGTGTGATGAGC 60.739 61.111 18.82 0.00 39.18 4.26
982 1079 4.492160 CTGCTGCATGGGCGCAAG 62.492 66.667 10.83 4.18 44.47 4.01
989 1090 2.441348 TGGCCATCTGCTGCATGG 60.441 61.111 16.16 16.16 43.47 3.66
1278 1388 1.102809 TCACCACCACGTCGTACACT 61.103 55.000 0.00 0.00 0.00 3.55
1531 1652 1.134461 AGTGAGCTCCATGATCAGCAC 60.134 52.381 12.15 0.00 42.19 4.40
1534 1655 1.408340 ACGAGTGAGCTCCATGATCAG 59.592 52.381 12.15 0.00 42.19 2.90
1745 1866 7.706607 GGTTTGAAGTGAAAATGAAACTAGCTT 59.293 33.333 0.00 0.00 0.00 3.74
1768 1889 1.188863 GCATGCCCTTTCTGATGGTT 58.811 50.000 6.36 0.00 0.00 3.67
1813 1934 4.728534 TGCAAGTTGCCGTTAAATATGTC 58.271 39.130 24.59 0.00 44.23 3.06
1825 1951 6.783892 TTCAAAATATTCTTGCAAGTTGCC 57.216 33.333 25.19 7.79 44.23 4.52
1842 1968 5.452636 CCGATTTTCTTGGGGAGTTTCAAAA 60.453 40.000 0.00 0.00 0.00 2.44
2045 2197 6.705863 ACTTTGATCCTATTGAAGCCATTC 57.294 37.500 0.00 0.00 35.87 2.67
2189 2341 0.956633 ACACTGCACAAAGGATGCTG 59.043 50.000 0.00 2.76 43.77 4.41
2196 2348 1.603802 CCTACACCACACTGCACAAAG 59.396 52.381 0.00 0.00 0.00 2.77
2197 2349 1.210722 TCCTACACCACACTGCACAAA 59.789 47.619 0.00 0.00 0.00 2.83
2213 2366 0.394488 CCAGCTCGTCTGTCCTCCTA 60.394 60.000 6.67 0.00 41.25 2.94
2243 2396 2.093983 GTGATGTGCGACGCGTTC 59.906 61.111 15.53 9.54 0.00 3.95
2399 2552 6.912082 TCATACAATGTGGACTGAACAATTG 58.088 36.000 3.24 3.24 0.00 2.32
2427 2580 0.966920 ACCACCACTCTGTTCTACCG 59.033 55.000 0.00 0.00 0.00 4.02
2492 2649 3.817647 GACTTTCTGGTCATCTTGCACTT 59.182 43.478 0.00 0.00 36.35 3.16
2617 2796 4.726583 TCCCACTATAGCGTCTAGTCAAT 58.273 43.478 0.00 0.00 0.00 2.57
2663 2842 7.998964 TCTCCCTATAATTTTCCCACTTTGATC 59.001 37.037 0.00 0.00 0.00 2.92
2758 2937 5.261040 TGGACTCTCCCTGATTTCATTTT 57.739 39.130 0.00 0.00 35.03 1.82
2800 2979 8.686334 GGACCAAGTACATTTTCATGATGTATT 58.314 33.333 10.11 4.51 40.81 1.89
2848 3027 2.877866 TGGGAAATTAGGCGGAAAACA 58.122 42.857 0.00 0.00 0.00 2.83
2855 3034 5.334569 CGTGGTTTATATGGGAAATTAGGCG 60.335 44.000 0.00 0.00 0.00 5.52
2928 3108 0.620990 TGGGACGGCAACCCCTAATA 60.621 55.000 12.44 0.00 46.21 0.98
3008 3188 8.726068 ACCATTTTTCAAAAGTGGTAGTTTTTG 58.274 29.630 24.55 0.66 42.66 2.44
3195 3426 3.454082 AGGTGTTTGAGGAAATGCCAAAA 59.546 39.130 0.00 0.00 40.02 2.44
3469 3723 2.817834 AGCGTGCGTGTGTGTTGT 60.818 55.556 0.00 0.00 0.00 3.32
3487 3741 1.803289 GAACCAAGGCCGATGCTTC 59.197 57.895 0.00 0.30 37.74 3.86
3504 3805 1.674651 AGCTCGTGTGGTAGCTCGA 60.675 57.895 0.00 0.00 45.92 4.04
3896 4208 7.242359 TCTTCTTCTTTCTCCTCCTTTCTCTA 58.758 38.462 0.00 0.00 0.00 2.43
3902 4221 5.151454 TCACTCTTCTTCTTTCTCCTCCTT 58.849 41.667 0.00 0.00 0.00 3.36
3911 4230 4.965814 TGTCAGCATCACTCTTCTTCTTT 58.034 39.130 0.00 0.00 0.00 2.52
3942 4261 7.148771 CGTTACATTGACCGTTATTACAAGTGA 60.149 37.037 0.00 0.00 0.00 3.41
4031 4350 5.738118 TTTGTGACTAAAAACTACCACGG 57.262 39.130 0.00 0.00 0.00 4.94
4032 4351 9.377383 CTAATTTTGTGACTAAAAACTACCACG 57.623 33.333 0.00 0.00 33.67 4.94
4148 4506 6.096695 CGACCAAGACCTTTTTGAAAAAGAA 58.903 36.000 26.93 0.00 0.00 2.52
4150 4508 5.407502 ACGACCAAGACCTTTTTGAAAAAG 58.592 37.500 20.45 20.45 0.00 2.27
4156 4514 4.632538 AAGAACGACCAAGACCTTTTTG 57.367 40.909 0.00 0.00 0.00 2.44
4281 4646 3.830755 AGTTCTTGTACCTCGCCTTCTTA 59.169 43.478 0.00 0.00 0.00 2.10
4383 4748 2.435059 GCTGTCGCCTTGGACTCC 60.435 66.667 0.00 0.00 37.81 3.85
4434 4799 2.811317 GTGAGCTGGTTCGCGAGG 60.811 66.667 9.59 2.45 34.40 4.63
4508 4873 1.117994 TGGAAAACCATTGCACTGCA 58.882 45.000 0.00 0.00 36.47 4.41
4509 4874 2.460757 ATGGAAAACCATTGCACTGC 57.539 45.000 0.00 0.00 0.00 4.40
4544 5605 7.490725 CAGGATAGTGCTATCTGAAAATATCCG 59.509 40.741 16.07 5.95 41.40 4.18
4554 5615 7.172875 CCAGAAAATTCAGGATAGTGCTATCTG 59.827 40.741 16.07 12.67 41.20 2.90
4595 5656 0.035881 CTCCCTCTTCTTGCACTGCA 59.964 55.000 0.00 0.00 36.47 4.41
4596 5657 0.676151 CCTCCCTCTTCTTGCACTGC 60.676 60.000 0.00 0.00 0.00 4.40
4612 5677 5.297547 TCGTCTTGTGGCAAATATATCCTC 58.702 41.667 0.00 0.00 0.00 3.71
4941 6293 4.821532 ATCTTCCATTTGAGCCCCTAAT 57.178 40.909 0.00 0.00 0.00 1.73
5247 6628 1.342076 ACTAACCGGATGAGGAGCTCA 60.342 52.381 17.19 0.00 44.99 4.26
5254 6635 4.341235 TGACTATCCAACTAACCGGATGAG 59.659 45.833 9.46 4.23 42.14 2.90
5316 6716 0.322816 AGCCCTTCGTGTCATGCATT 60.323 50.000 0.00 0.00 0.00 3.56
5327 6727 2.543067 CTTCCTTCCCCAGCCCTTCG 62.543 65.000 0.00 0.00 0.00 3.79
5367 6767 1.032794 CATTCGGTCTCCATCGAGGA 58.967 55.000 0.00 0.67 46.75 3.71
5472 6872 6.134535 ACAGAATAACATACCTGTTTCCCA 57.865 37.500 0.00 0.00 43.05 4.37
5527 6927 8.015087 CAGCGTCATATTTTCTCAGTTTTGTAA 58.985 33.333 0.00 0.00 0.00 2.41
5529 6929 6.017109 ACAGCGTCATATTTTCTCAGTTTTGT 60.017 34.615 0.00 0.00 0.00 2.83
5572 6972 0.733909 GTTTCCTTTGAGCGGCATGC 60.734 55.000 9.90 9.90 46.98 4.06
5594 6994 8.143193 TGTTAAGTTTTCAATGTCTTGCATGAT 58.857 29.630 5.49 0.00 37.96 2.45
5596 6996 7.436080 AGTGTTAAGTTTTCAATGTCTTGCATG 59.564 33.333 0.00 0.00 37.96 4.06
5614 8477 8.948631 ACAATACATAGATGACCAGTGTTAAG 57.051 34.615 0.00 0.00 0.00 1.85
5621 10417 6.539826 TGCAAGAACAATACATAGATGACCAG 59.460 38.462 0.00 0.00 0.00 4.00
5683 10479 7.044052 GCTGCAATCATAAATCGAAAACCTAAC 60.044 37.037 0.00 0.00 0.00 2.34
5714 10510 0.842635 CCATTCCTCTCCCCTTCCTG 59.157 60.000 0.00 0.00 0.00 3.86
5773 10570 1.266867 ATGAAATTGCCACAGCCCCC 61.267 55.000 0.00 0.00 38.69 5.40
5774 10571 0.108041 CATGAAATTGCCACAGCCCC 60.108 55.000 0.00 0.00 38.69 5.80
5778 10575 1.134907 GCCTCCATGAAATTGCCACAG 60.135 52.381 0.00 0.00 0.00 3.66
5896 10694 9.531942 CCTGCAACAAAAATTATGAATGCTATA 57.468 29.630 18.05 6.63 36.15 1.31
5897 10695 7.496591 CCCTGCAACAAAAATTATGAATGCTAT 59.503 33.333 18.05 0.00 36.15 2.97
5898 10696 6.817641 CCCTGCAACAAAAATTATGAATGCTA 59.182 34.615 18.05 10.12 36.15 3.49
5899 10697 5.644636 CCCTGCAACAAAAATTATGAATGCT 59.355 36.000 18.05 0.00 36.15 3.79
5900 10698 5.642919 TCCCTGCAACAAAAATTATGAATGC 59.357 36.000 14.06 14.06 35.91 3.56
5901 10699 7.670009 TTCCCTGCAACAAAAATTATGAATG 57.330 32.000 0.00 0.00 0.00 2.67
5902 10700 8.866970 AATTCCCTGCAACAAAAATTATGAAT 57.133 26.923 0.00 0.00 0.00 2.57
5903 10701 9.956640 ATAATTCCCTGCAACAAAAATTATGAA 57.043 25.926 9.55 0.00 31.52 2.57
5904 10702 9.956640 AATAATTCCCTGCAACAAAAATTATGA 57.043 25.926 10.47 0.00 32.50 2.15
5917 10715 9.639563 TGTCTCAAATAATAATAATTCCCTGCA 57.360 29.630 0.00 0.00 0.00 4.41
5928 10726 9.577110 CAGCACAACATTGTCTCAAATAATAAT 57.423 29.630 0.00 0.00 39.91 1.28
5929 10727 8.791675 TCAGCACAACATTGTCTCAAATAATAA 58.208 29.630 0.00 0.00 39.91 1.40
5930 10728 8.334263 TCAGCACAACATTGTCTCAAATAATA 57.666 30.769 0.00 0.00 39.91 0.98
5931 10729 7.218228 TCAGCACAACATTGTCTCAAATAAT 57.782 32.000 0.00 0.00 39.91 1.28
5932 10730 6.631971 TCAGCACAACATTGTCTCAAATAA 57.368 33.333 0.00 0.00 39.91 1.40
5933 10731 6.631971 TTCAGCACAACATTGTCTCAAATA 57.368 33.333 0.00 0.00 39.91 1.40
5934 10732 5.518848 TTCAGCACAACATTGTCTCAAAT 57.481 34.783 0.00 0.00 39.91 2.32
5935 10733 4.979943 TTCAGCACAACATTGTCTCAAA 57.020 36.364 0.00 0.00 39.91 2.69
5936 10734 6.822667 ATATTCAGCACAACATTGTCTCAA 57.177 33.333 0.00 0.00 39.91 3.02
5937 10735 9.783081 ATATATATTCAGCACAACATTGTCTCA 57.217 29.630 0.00 0.00 39.91 3.27
5939 10737 9.783081 TCATATATATTCAGCACAACATTGTCT 57.217 29.630 0.00 0.00 39.91 3.41
5945 10743 9.729281 ACATCATCATATATATTCAGCACAACA 57.271 29.630 0.00 0.00 0.00 3.33
5959 10757 8.103305 GCCTTCCCTAAGAAACATCATCATATA 58.897 37.037 0.00 0.00 34.37 0.86
5966 10764 3.366052 GGCCTTCCCTAAGAAACATCA 57.634 47.619 0.00 0.00 34.37 3.07
5979 10777 2.644676 GAGTGTCAAATAGGGCCTTCC 58.355 52.381 13.45 0.00 0.00 3.46
5980 10778 2.644676 GGAGTGTCAAATAGGGCCTTC 58.355 52.381 13.45 0.00 0.00 3.46
5981 10779 1.065418 CGGAGTGTCAAATAGGGCCTT 60.065 52.381 13.45 0.00 0.00 4.35
5982 10780 0.541863 CGGAGTGTCAAATAGGGCCT 59.458 55.000 12.58 12.58 0.00 5.19
5983 10781 1.095807 GCGGAGTGTCAAATAGGGCC 61.096 60.000 0.00 0.00 0.00 5.80
5985 10783 0.251916 TGGCGGAGTGTCAAATAGGG 59.748 55.000 0.00 0.00 0.00 3.53
5986 10784 2.107950 TTGGCGGAGTGTCAAATAGG 57.892 50.000 0.00 0.00 0.00 2.57
5987 10785 3.270027 TGATTGGCGGAGTGTCAAATAG 58.730 45.455 0.00 0.00 0.00 1.73
5988 10786 3.270027 CTGATTGGCGGAGTGTCAAATA 58.730 45.455 0.00 0.00 0.00 1.40
5990 10788 1.522668 CTGATTGGCGGAGTGTCAAA 58.477 50.000 0.00 0.00 0.00 2.69
5991 10789 0.955428 GCTGATTGGCGGAGTGTCAA 60.955 55.000 0.00 0.00 0.00 3.18
5993 10791 1.375908 TGCTGATTGGCGGAGTGTC 60.376 57.895 0.00 0.00 34.52 3.67
5994 10792 1.672356 GTGCTGATTGGCGGAGTGT 60.672 57.895 0.00 0.00 34.52 3.55
5996 10794 0.957395 CTTGTGCTGATTGGCGGAGT 60.957 55.000 0.00 0.00 34.52 3.85
6000 10798 1.689959 GAAACTTGTGCTGATTGGCG 58.310 50.000 0.00 0.00 34.52 5.69
6001 10799 1.689959 CGAAACTTGTGCTGATTGGC 58.310 50.000 0.00 0.00 0.00 4.52
6002 10800 1.267806 AGCGAAACTTGTGCTGATTGG 59.732 47.619 0.00 0.00 37.62 3.16
6003 10801 2.578495 GAGCGAAACTTGTGCTGATTG 58.422 47.619 0.00 0.00 39.49 2.67
6004 10802 1.195448 CGAGCGAAACTTGTGCTGATT 59.805 47.619 0.00 0.00 39.49 2.57
6005 10803 0.792640 CGAGCGAAACTTGTGCTGAT 59.207 50.000 0.00 0.00 39.49 2.90
6006 10804 1.221466 CCGAGCGAAACTTGTGCTGA 61.221 55.000 0.00 0.00 39.49 4.26
6007 10805 1.205064 CCGAGCGAAACTTGTGCTG 59.795 57.895 0.00 0.00 39.49 4.41
6008 10806 1.961277 CCCGAGCGAAACTTGTGCT 60.961 57.895 0.00 0.00 42.73 4.40
6009 10807 0.947180 TACCCGAGCGAAACTTGTGC 60.947 55.000 0.00 0.00 0.00 4.57
6010 10808 1.068474 CTACCCGAGCGAAACTTGTG 58.932 55.000 0.00 0.00 0.00 3.33
6011 10809 0.037605 CCTACCCGAGCGAAACTTGT 60.038 55.000 0.00 0.00 0.00 3.16
6012 10810 1.359459 GCCTACCCGAGCGAAACTTG 61.359 60.000 0.00 0.00 0.00 3.16
6013 10811 1.079336 GCCTACCCGAGCGAAACTT 60.079 57.895 0.00 0.00 0.00 2.66
6014 10812 2.577593 GCCTACCCGAGCGAAACT 59.422 61.111 0.00 0.00 0.00 2.66
6015 10813 2.510918 GGCCTACCCGAGCGAAAC 60.511 66.667 0.00 0.00 0.00 2.78
6026 10824 4.256180 CTCCATGGGCCGGCCTAC 62.256 72.222 42.70 28.63 36.10 3.18
6031 10829 4.738998 TGTTGCTCCATGGGCCGG 62.739 66.667 13.02 0.00 0.00 6.13
6032 10830 3.443045 GTGTTGCTCCATGGGCCG 61.443 66.667 13.02 1.91 0.00 6.13
6033 10831 0.395586 TATGTGTTGCTCCATGGGCC 60.396 55.000 13.02 0.00 0.00 5.80
6034 10832 1.027357 CTATGTGTTGCTCCATGGGC 58.973 55.000 13.02 14.76 0.00 5.36
6035 10833 2.292267 GACTATGTGTTGCTCCATGGG 58.708 52.381 13.02 3.69 0.00 4.00
6036 10834 1.935873 CGACTATGTGTTGCTCCATGG 59.064 52.381 4.97 4.97 0.00 3.66
6044 10842 0.796870 TCGCTCGCGACTATGTGTTG 60.797 55.000 3.71 0.00 44.01 3.33
6045 10843 0.523546 CTCGCTCGCGACTATGTGTT 60.524 55.000 3.71 0.00 44.01 3.32
6046 10844 1.062685 CTCGCTCGCGACTATGTGT 59.937 57.895 3.71 0.00 44.01 3.72
6047 10845 2.289375 GCTCGCTCGCGACTATGTG 61.289 63.158 3.71 1.79 44.01 3.21
6048 10846 2.024871 GCTCGCTCGCGACTATGT 59.975 61.111 3.71 0.00 44.01 2.29
6049 10847 1.724234 GAGCTCGCTCGCGACTATG 60.724 63.158 3.71 0.00 44.01 2.23
6050 10848 0.600518 TAGAGCTCGCTCGCGACTAT 60.601 55.000 3.71 11.82 46.90 2.12
6051 10849 1.216298 CTAGAGCTCGCTCGCGACTA 61.216 60.000 3.71 9.47 46.90 2.59
6052 10850 2.511829 TAGAGCTCGCTCGCGACT 60.512 61.111 3.71 12.15 46.90 4.18
6053 10851 2.052590 CTAGAGCTCGCTCGCGAC 60.053 66.667 3.71 7.70 46.90 5.19
6054 10852 3.943034 GCTAGAGCTCGCTCGCGA 61.943 66.667 9.26 9.26 46.90 5.87
6078 10876 7.554476 CCCCACAAAAACAGAGGAAAATAAAAA 59.446 33.333 0.00 0.00 0.00 1.94
6079 10877 7.051000 CCCCACAAAAACAGAGGAAAATAAAA 58.949 34.615 0.00 0.00 0.00 1.52
6080 10878 6.157123 ACCCCACAAAAACAGAGGAAAATAAA 59.843 34.615 0.00 0.00 0.00 1.40
6081 10879 5.663556 ACCCCACAAAAACAGAGGAAAATAA 59.336 36.000 0.00 0.00 0.00 1.40
6082 10880 5.212745 ACCCCACAAAAACAGAGGAAAATA 58.787 37.500 0.00 0.00 0.00 1.40
6083 10881 4.037222 ACCCCACAAAAACAGAGGAAAAT 58.963 39.130 0.00 0.00 0.00 1.82
6084 10882 3.445987 ACCCCACAAAAACAGAGGAAAA 58.554 40.909 0.00 0.00 0.00 2.29
6085 10883 3.108847 ACCCCACAAAAACAGAGGAAA 57.891 42.857 0.00 0.00 0.00 3.13
6086 10884 2.838637 ACCCCACAAAAACAGAGGAA 57.161 45.000 0.00 0.00 0.00 3.36
6087 10885 2.838637 AACCCCACAAAAACAGAGGA 57.161 45.000 0.00 0.00 0.00 3.71
6088 10886 3.904800 AAAACCCCACAAAAACAGAGG 57.095 42.857 0.00 0.00 0.00 3.69
6089 10887 7.857734 AAATTAAAACCCCACAAAAACAGAG 57.142 32.000 0.00 0.00 0.00 3.35
6090 10888 7.883311 TGAAAATTAAAACCCCACAAAAACAGA 59.117 29.630 0.00 0.00 0.00 3.41
6091 10889 8.045176 TGAAAATTAAAACCCCACAAAAACAG 57.955 30.769 0.00 0.00 0.00 3.16
6092 10890 7.996098 TGAAAATTAAAACCCCACAAAAACA 57.004 28.000 0.00 0.00 0.00 2.83
6093 10891 9.862371 AAATGAAAATTAAAACCCCACAAAAAC 57.138 25.926 0.00 0.00 0.00 2.43
6096 10894 9.467796 AGAAAATGAAAATTAAAACCCCACAAA 57.532 25.926 0.00 0.00 0.00 2.83
6098 10896 9.771534 CTAGAAAATGAAAATTAAAACCCCACA 57.228 29.630 0.00 0.00 0.00 4.17
6099 10897 9.990360 TCTAGAAAATGAAAATTAAAACCCCAC 57.010 29.630 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.