Multiple sequence alignment - TraesCS7D01G543400
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS7D01G543400
chr7D
100.000
3586
0
0
1
3586
631922471
631918886
0.000000e+00
6623
1
TraesCS7D01G543400
chr7D
82.890
2291
313
42
678
2907
631935917
631933645
0.000000e+00
1986
2
TraesCS7D01G543400
chr7D
81.527
1061
159
28
699
1748
631959879
631958845
0.000000e+00
839
3
TraesCS7D01G543400
chr7D
80.913
1095
168
21
692
1756
631968856
631967773
0.000000e+00
826
4
TraesCS7D01G543400
chr7D
78.193
1151
212
26
1794
2930
631958828
631957703
0.000000e+00
699
5
TraesCS7D01G543400
chr7D
81.446
830
137
7
1794
2611
631967764
631966940
0.000000e+00
664
6
TraesCS7D01G543400
chr7D
83.758
628
93
7
1132
1756
631964734
631964113
1.430000e-163
586
7
TraesCS7D01G543400
chr7D
82.158
241
34
8
6
240
631938082
631937845
7.850000e-47
198
8
TraesCS7D01G543400
chr7D
82.895
152
18
4
2962
3109
631966660
631966513
2.910000e-26
130
9
TraesCS7D01G543400
chr7A
90.167
2451
179
12
525
2941
736496453
736498875
0.000000e+00
3134
10
TraesCS7D01G543400
chr7A
82.530
2324
315
53
674
2930
736465476
736467775
0.000000e+00
1958
11
TraesCS7D01G543400
chr7A
85.785
605
80
5
950
1552
736445287
736445887
1.400000e-178
636
12
TraesCS7D01G543400
chr7A
86.782
522
38
4
1
520
736495883
736496375
1.450000e-153
553
13
TraesCS7D01G543400
chr7A
83.045
289
34
6
669
948
736444976
736445258
7.690000e-62
248
14
TraesCS7D01G543400
chr7A
82.645
242
30
10
6
240
736464727
736464963
1.690000e-48
204
15
TraesCS7D01G543400
chr7A
87.692
130
13
2
1
129
736451944
736452071
8.020000e-32
148
16
TraesCS7D01G543400
chr7B
82.490
2313
323
49
679
2928
743458293
743456000
0.000000e+00
1953
17
TraesCS7D01G543400
chr7B
90.772
1322
83
9
527
1811
743448414
743447095
0.000000e+00
1729
18
TraesCS7D01G543400
chr7B
90.468
1133
95
4
1811
2941
743433015
743431894
0.000000e+00
1482
19
TraesCS7D01G543400
chr7B
79.939
1316
208
38
1565
2847
743494049
743492757
0.000000e+00
917
20
TraesCS7D01G543400
chr7B
86.800
500
60
5
1054
1552
743494641
743494147
1.450000e-153
553
21
TraesCS7D01G543400
chr7B
85.905
525
52
12
4
524
743448986
743448480
1.130000e-149
540
22
TraesCS7D01G543400
chr7B
83.750
240
33
6
6
240
743459054
743458816
4.660000e-54
222
23
TraesCS7D01G543400
chr7B
87.640
178
13
6
2960
3133
743431832
743431660
7.850000e-47
198
24
TraesCS7D01G543400
chrUn
99.538
433
2
0
3154
3586
26100097
26099665
0.000000e+00
789
25
TraesCS7D01G543400
chrUn
99.538
433
2
0
3154
3586
210959670
210959238
0.000000e+00
789
26
TraesCS7D01G543400
chrUn
99.538
433
2
0
3154
3586
281413445
281413013
0.000000e+00
789
27
TraesCS7D01G543400
chrUn
99.538
433
2
0
3154
3586
382632791
382633223
0.000000e+00
789
28
TraesCS7D01G543400
chrUn
99.085
437
3
1
3150
3586
92608838
92609273
0.000000e+00
784
29
TraesCS7D01G543400
chr3D
99.538
433
2
0
3154
3586
592846388
592845956
0.000000e+00
789
30
TraesCS7D01G543400
chr3D
79.929
563
89
18
984
1533
39120678
39120127
3.360000e-105
392
31
TraesCS7D01G543400
chr2D
99.538
433
2
0
3154
3586
37514853
37514421
0.000000e+00
789
32
TraesCS7D01G543400
chr1D
99.309
434
3
0
3153
3586
6749936
6750369
0.000000e+00
785
33
TraesCS7D01G543400
chr1D
99.307
433
3
0
3154
3586
472808288
472807856
0.000000e+00
784
34
TraesCS7D01G543400
chr3B
74.571
350
71
14
2011
2351
61915716
61915376
1.740000e-28
137
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS7D01G543400
chr7D
631918886
631922471
3585
True
6623.0
6623
100.0000
1
3586
1
chr7D.!!$R1
3585
1
TraesCS7D01G543400
chr7D
631933645
631938082
4437
True
1092.0
1986
82.5240
6
2907
2
chr7D.!!$R2
2901
2
TraesCS7D01G543400
chr7D
631957703
631959879
2176
True
769.0
839
79.8600
699
2930
2
chr7D.!!$R3
2231
3
TraesCS7D01G543400
chr7D
631964113
631968856
4743
True
551.5
826
82.2530
692
3109
4
chr7D.!!$R4
2417
4
TraesCS7D01G543400
chr7A
736495883
736498875
2992
False
1843.5
3134
88.4745
1
2941
2
chr7A.!!$F4
2940
5
TraesCS7D01G543400
chr7A
736464727
736467775
3048
False
1081.0
1958
82.5875
6
2930
2
chr7A.!!$F3
2924
6
TraesCS7D01G543400
chr7A
736444976
736445887
911
False
442.0
636
84.4150
669
1552
2
chr7A.!!$F2
883
7
TraesCS7D01G543400
chr7B
743447095
743448986
1891
True
1134.5
1729
88.3385
4
1811
2
chr7B.!!$R2
1807
8
TraesCS7D01G543400
chr7B
743456000
743459054
3054
True
1087.5
1953
83.1200
6
2928
2
chr7B.!!$R3
2922
9
TraesCS7D01G543400
chr7B
743431660
743433015
1355
True
840.0
1482
89.0540
1811
3133
2
chr7B.!!$R1
1322
10
TraesCS7D01G543400
chr7B
743492757
743494641
1884
True
735.0
917
83.3695
1054
2847
2
chr7B.!!$R4
1793
11
TraesCS7D01G543400
chr3D
39120127
39120678
551
True
392.0
392
79.9290
984
1533
1
chr3D.!!$R1
549
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
274
1766
0.030908
CCGTAGCTAGAGCCTTTCCG
59.969
60.0
0.0
0.0
43.38
4.30
F
635
2206
0.035056
GACACAAGCAGGGGTAGCAT
60.035
55.0
0.0
0.0
0.00
3.79
F
637
2208
0.035152
CACAAGCAGGGGTAGCATGA
60.035
55.0
0.0
0.0
34.97
3.07
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
2144
3900
0.035725
CCTGCTGATGTTCTGCTCCA
60.036
55.000
7.70
0.00
41.21
3.86
R
2542
4310
0.946221
CACTGACGAGGTCTTGCCAC
60.946
60.000
0.00
0.00
40.61
5.01
R
2635
4405
6.531240
CCCATGGATTATAAATTTATGCACGC
59.469
38.462
15.22
5.67
0.00
5.34
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
135
140
5.181433
CCAGGTTTCTAGAAAAGGCAAGTAC
59.819
44.000
19.30
4.68
31.33
2.73
185
191
2.248248
CACCAGTACAAGACTCCCTGA
58.752
52.381
0.00
0.00
35.64
3.86
232
239
6.537355
GGATGATTATCTCCAGACAAATCCA
58.463
40.000
0.00
0.00
32.79
3.41
234
241
6.566079
TGATTATCTCCAGACAAATCCAGT
57.434
37.500
9.46
0.00
32.79
4.00
243
1735
5.104569
TCCAGACAAATCCAGTGTATGCATA
60.105
40.000
1.16
1.16
36.98
3.14
274
1766
0.030908
CCGTAGCTAGAGCCTTTCCG
59.969
60.000
0.00
0.00
43.38
4.30
303
1795
4.320870
CGGTGGTAACTGATACAAAAGGT
58.679
43.478
0.00
0.00
36.14
3.50
315
1807
7.504238
ACTGATACAAAAGGTCATGGTTTTACA
59.496
33.333
0.00
0.00
0.00
2.41
344
1836
2.705658
AGATAAAGATCGGTCATGGCCA
59.294
45.455
18.31
8.56
37.15
5.36
349
1841
4.758251
TCGGTCATGGCCACGCAG
62.758
66.667
18.31
1.74
0.00
5.18
431
1923
7.031372
CACCACAACATTGAGAATTATCCTTG
58.969
38.462
0.00
0.00
0.00
3.61
467
1959
7.660030
AGCAATTAATGGTAAACTATGGCTT
57.340
32.000
0.00
0.00
38.18
4.35
505
1998
6.371278
TCTAGGGGTCATAGACTTACGAAAT
58.629
40.000
0.00
0.00
32.47
2.17
584
2153
2.512485
TTGTTTGCCTTGCATCACAG
57.488
45.000
0.00
0.00
38.76
3.66
621
2192
4.787260
ACAAAAGCATGCATATGACACA
57.213
36.364
21.98
0.00
36.36
3.72
635
2206
0.035056
GACACAAGCAGGGGTAGCAT
60.035
55.000
0.00
0.00
0.00
3.79
636
2207
0.322816
ACACAAGCAGGGGTAGCATG
60.323
55.000
0.00
0.00
36.81
4.06
637
2208
0.035152
CACAAGCAGGGGTAGCATGA
60.035
55.000
0.00
0.00
34.97
3.07
638
2209
0.698238
ACAAGCAGGGGTAGCATGAA
59.302
50.000
0.00
0.00
34.97
2.57
639
2210
1.340405
ACAAGCAGGGGTAGCATGAAG
60.340
52.381
0.00
0.00
34.97
3.02
640
2211
1.065199
CAAGCAGGGGTAGCATGAAGA
60.065
52.381
0.00
0.00
32.86
2.87
641
2212
0.835941
AGCAGGGGTAGCATGAAGAG
59.164
55.000
0.00
0.00
0.00
2.85
642
2213
0.817229
GCAGGGGTAGCATGAAGAGC
60.817
60.000
0.00
0.00
0.00
4.09
643
2214
0.543277
CAGGGGTAGCATGAAGAGCA
59.457
55.000
0.00
0.00
0.00
4.26
644
2215
0.543749
AGGGGTAGCATGAAGAGCAC
59.456
55.000
0.00
0.00
0.00
4.40
645
2216
0.253044
GGGGTAGCATGAAGAGCACA
59.747
55.000
0.00
0.00
0.00
4.57
646
2217
1.133976
GGGGTAGCATGAAGAGCACAT
60.134
52.381
0.00
0.00
0.00
3.21
647
2218
2.104792
GGGGTAGCATGAAGAGCACATA
59.895
50.000
0.00
0.00
0.00
2.29
648
2219
3.244700
GGGGTAGCATGAAGAGCACATAT
60.245
47.826
0.00
0.00
0.00
1.78
649
2220
3.750130
GGGTAGCATGAAGAGCACATATG
59.250
47.826
0.00
0.00
0.00
1.78
668
2239
9.715123
CACATATGCATACGTTAAAAAGAATGA
57.285
29.630
8.99
0.00
0.00
2.57
669
2240
9.935682
ACATATGCATACGTTAAAAAGAATGAG
57.064
29.630
8.99
0.00
0.00
2.90
672
2243
8.895932
ATGCATACGTTAAAAAGAATGAGAAC
57.104
30.769
0.00
0.00
0.00
3.01
675
2246
9.176181
GCATACGTTAAAAAGAATGAGAACAAA
57.824
29.630
0.00
0.00
0.00
2.83
680
2251
8.865001
CGTTAAAAAGAATGAGAACAAAACCAA
58.135
29.630
0.00
0.00
0.00
3.67
716
2323
2.676748
TGTCATGGCTTGGAAAGGTTT
58.323
42.857
0.00
0.00
46.35
3.27
948
2569
8.613923
TGGATATCCATAGCTCATTAAATTCCA
58.386
33.333
20.98
0.00
42.01
3.53
991
2640
5.103771
ACCCTAGAATCCATTGCAGAGAAAT
60.104
40.000
0.00
0.00
0.00
2.17
1046
2701
3.931747
AACAGAAGTTGGAGCTACCGCT
61.932
50.000
0.00
0.00
42.67
5.52
1096
2751
5.798125
GGAGATCATCAACTCCTATGTGA
57.202
43.478
0.00
0.00
46.28
3.58
1125
2780
0.815095
TGCTCGATGAAGCCTTCGTA
59.185
50.000
0.00
0.00
41.77
3.43
1308
2964
0.109723
CCACCGGAAAGGACAAGGAA
59.890
55.000
9.46
0.00
45.00
3.36
1311
2967
2.890945
CACCGGAAAGGACAAGGAAATT
59.109
45.455
9.46
0.00
45.00
1.82
1482
3142
4.619227
ACCGTCACCGCCACCAAG
62.619
66.667
0.00
0.00
0.00
3.61
1552
3300
9.330063
CATGAATTCTTAACATCCAGTAGCTAA
57.670
33.333
7.05
0.00
0.00
3.09
1553
3301
8.948631
TGAATTCTTAACATCCAGTAGCTAAG
57.051
34.615
7.05
0.00
0.00
2.18
1608
3357
6.621514
AGAATCCCCACCTGAATATTACTCTT
59.378
38.462
0.00
0.00
0.00
2.85
1613
3362
7.404980
TCCCCACCTGAATATTACTCTTAAGTT
59.595
37.037
1.63
0.00
36.92
2.66
1685
3434
1.146041
GCGGCCATGACATAGTGGA
59.854
57.895
2.24
0.00
37.72
4.02
1791
3541
0.468226
ACCGCCATGGAATGTCGTAT
59.532
50.000
18.40
0.00
45.38
3.06
1792
3542
1.134220
ACCGCCATGGAATGTCGTATT
60.134
47.619
18.40
0.00
45.38
1.89
1802
3554
6.176975
TGGAATGTCGTATTGTTTCATGAC
57.823
37.500
0.00
0.00
0.00
3.06
1841
3593
1.375326
GGAAAGGTTGACCGAGGCT
59.625
57.895
0.00
0.00
42.08
4.58
1854
3607
2.835764
ACCGAGGCTAAATGTTGGAGTA
59.164
45.455
0.00
0.00
0.00
2.59
1872
3625
0.854218
TAGAGGCCTAGGGGAGTCAG
59.146
60.000
4.42
0.00
33.58
3.51
1873
3626
2.041405
AGGCCTAGGGGAGTCAGC
60.041
66.667
1.29
0.00
33.58
4.26
1905
3658
2.431954
CCAGAGATTGGCACTTGGAT
57.568
50.000
0.00
0.00
40.87
3.41
1923
3677
1.907255
GATAGGGCCGCCTAAATACCT
59.093
52.381
9.86
0.00
0.00
3.08
1926
3680
2.129363
AGGGCCGCCTAAATACCTAAA
58.871
47.619
9.86
0.00
0.00
1.85
2001
3757
0.950836
CGACAAAAGCATCACACCCA
59.049
50.000
0.00
0.00
0.00
4.51
2144
3900
2.519771
ATGTCATGCCAATGTCCACT
57.480
45.000
0.00
0.00
35.15
4.00
2166
3922
2.413142
GCAGAACATCAGCAGGGGC
61.413
63.158
0.00
0.00
41.61
5.80
2186
3942
5.396884
GGGGCTCACTGACTTAGATACATTT
60.397
44.000
0.00
0.00
0.00
2.32
2294
4050
0.250640
GGGCTGGCTCATCGATGATT
60.251
55.000
27.43
0.00
36.02
2.57
2381
4140
1.836158
CCCAACACCACCATTGCCA
60.836
57.895
0.00
0.00
0.00
4.92
2402
4170
4.218200
CCATTCTACCAACAACATCAGCAA
59.782
41.667
0.00
0.00
0.00
3.91
2422
4190
6.431852
CAGCAAATGATGATGTATATGGGTGA
59.568
38.462
0.00
0.00
40.58
4.02
2430
4198
7.455638
TGATGATGTATATGGGTGAAGATCAGA
59.544
37.037
0.00
0.00
0.00
3.27
2462
4230
2.757077
GCTAAGCCTGGGTGTGGT
59.243
61.111
0.00
0.00
0.00
4.16
2471
4239
1.826340
CTGGGTGTGGTCCATCGTCA
61.826
60.000
0.00
0.00
33.29
4.35
2522
4290
0.250727
TGAGCAACAACTACCAGGGC
60.251
55.000
0.00
0.00
0.00
5.19
2585
4353
5.619132
ACATGAGTATGGATGACATGTGA
57.381
39.130
1.15
0.00
45.95
3.58
2648
4418
3.049206
GTGTGTGTGCGTGCATAAATTT
58.951
40.909
0.00
0.00
0.00
1.82
2658
4428
7.594386
TGTGCGTGCATAAATTTATAATCCATG
59.406
33.333
10.34
11.01
0.00
3.66
2659
4429
7.062138
GTGCGTGCATAAATTTATAATCCATGG
59.938
37.037
4.97
4.97
0.00
3.66
2726
4497
6.905076
CCGTATTTAATTTCTCATTGTGACCG
59.095
38.462
0.00
0.00
0.00
4.79
2746
4528
2.354259
GCTAGAGAGTTTGCATGCAGT
58.646
47.619
21.50
9.78
0.00
4.40
2858
4648
4.877282
TGTGTTTTAAAATACTGGCAGGC
58.123
39.130
23.09
1.26
32.11
4.85
2860
4650
3.057174
TGTTTTAAAATACTGGCAGGCGG
60.057
43.478
20.34
0.00
0.00
6.13
2864
4654
0.037590
AAATACTGGCAGGCGGACAA
59.962
50.000
20.34
0.00
30.64
3.18
2941
4749
3.181482
CCATTATATGTTTGGGCGTGCAA
60.181
43.478
0.00
0.00
0.00
4.08
2942
4750
3.495670
TTATATGTTTGGGCGTGCAAC
57.504
42.857
0.00
0.00
0.00
4.17
2943
4751
0.530288
ATATGTTTGGGCGTGCAACC
59.470
50.000
0.00
0.00
0.00
3.77
3048
4911
9.811995
ATTTTACTTCTAAAAGTTTGGGTCAAC
57.188
29.630
0.00
0.00
43.28
3.18
3068
4934
0.527565
ATTTGTGGCGATGTCCAAGC
59.472
50.000
0.00
0.00
37.96
4.01
3076
4942
2.507102
ATGTCCAAGCGAGCGACG
60.507
61.111
0.00
0.00
45.66
5.12
3111
4977
0.675633
GTTTGAGGCATGCAACAGGT
59.324
50.000
21.36
0.00
0.00
4.00
3136
6475
0.255033
GGGCCCGGTCTACTTGAAAT
59.745
55.000
5.69
0.00
0.00
2.17
3137
6476
1.340697
GGGCCCGGTCTACTTGAAATT
60.341
52.381
5.69
0.00
0.00
1.82
3138
6477
1.743394
GGCCCGGTCTACTTGAAATTG
59.257
52.381
0.00
0.00
0.00
2.32
3139
6478
2.433436
GCCCGGTCTACTTGAAATTGT
58.567
47.619
0.00
0.00
0.00
2.71
3140
6479
3.602483
GCCCGGTCTACTTGAAATTGTA
58.398
45.455
0.00
0.00
0.00
2.41
3142
6481
3.621715
CCCGGTCTACTTGAAATTGTAGC
59.378
47.826
0.00
0.00
36.88
3.58
3144
6483
4.330074
CCGGTCTACTTGAAATTGTAGCTG
59.670
45.833
0.00
0.00
36.88
4.24
3145
6484
4.330074
CGGTCTACTTGAAATTGTAGCTGG
59.670
45.833
0.00
0.00
36.88
4.85
3146
6485
4.095036
GGTCTACTTGAAATTGTAGCTGGC
59.905
45.833
0.00
0.00
36.88
4.85
3147
6486
4.695455
GTCTACTTGAAATTGTAGCTGGCA
59.305
41.667
0.00
0.00
36.88
4.92
3149
6488
4.708726
ACTTGAAATTGTAGCTGGCATC
57.291
40.909
0.00
0.00
0.00
3.91
3151
6490
4.397417
ACTTGAAATTGTAGCTGGCATCTC
59.603
41.667
0.00
0.00
0.00
2.75
3152
6491
3.954200
TGAAATTGTAGCTGGCATCTCA
58.046
40.909
0.00
0.00
0.00
3.27
3153
6492
3.691118
TGAAATTGTAGCTGGCATCTCAC
59.309
43.478
0.00
0.00
0.00
3.51
3154
6493
3.354948
AATTGTAGCTGGCATCTCACA
57.645
42.857
0.00
0.00
0.00
3.58
3155
6494
2.099141
TTGTAGCTGGCATCTCACAC
57.901
50.000
0.00
0.00
0.00
3.82
3156
6495
1.269958
TGTAGCTGGCATCTCACACT
58.730
50.000
0.00
0.00
0.00
3.55
3157
6496
2.456577
TGTAGCTGGCATCTCACACTA
58.543
47.619
0.00
0.00
0.00
2.74
3160
6499
2.739943
AGCTGGCATCTCACACTAGTA
58.260
47.619
0.00
0.00
0.00
1.82
3161
6500
2.692557
AGCTGGCATCTCACACTAGTAG
59.307
50.000
0.00
0.00
0.00
2.57
3162
6501
2.690497
GCTGGCATCTCACACTAGTAGA
59.310
50.000
3.59
0.00
0.00
2.59
3163
6502
3.131223
GCTGGCATCTCACACTAGTAGAA
59.869
47.826
3.59
0.00
0.00
2.10
3164
6503
4.382040
GCTGGCATCTCACACTAGTAGAAA
60.382
45.833
3.59
0.00
0.00
2.52
3165
6504
5.724328
CTGGCATCTCACACTAGTAGAAAA
58.276
41.667
3.59
0.00
0.00
2.29
3166
6505
5.479306
TGGCATCTCACACTAGTAGAAAAC
58.521
41.667
3.59
0.00
0.00
2.43
3167
6506
4.563184
GGCATCTCACACTAGTAGAAAACG
59.437
45.833
3.59
0.00
0.00
3.60
3168
6507
4.563184
GCATCTCACACTAGTAGAAAACGG
59.437
45.833
3.59
0.00
0.00
4.44
3169
6508
4.778534
TCTCACACTAGTAGAAAACGGG
57.221
45.455
3.59
0.00
0.00
5.28
3170
6509
3.508793
TCTCACACTAGTAGAAAACGGGG
59.491
47.826
3.59
0.00
0.00
5.73
3171
6510
2.028748
TCACACTAGTAGAAAACGGGGC
60.029
50.000
3.59
0.00
0.00
5.80
3174
6513
3.181452
ACACTAGTAGAAAACGGGGCAAA
60.181
43.478
3.59
0.00
0.00
3.68
3175
6514
3.435671
CACTAGTAGAAAACGGGGCAAAG
59.564
47.826
3.59
0.00
0.00
2.77
3176
6515
1.905637
AGTAGAAAACGGGGCAAAGG
58.094
50.000
0.00
0.00
0.00
3.11
3177
6516
1.144298
AGTAGAAAACGGGGCAAAGGT
59.856
47.619
0.00
0.00
0.00
3.50
3178
6517
1.538512
GTAGAAAACGGGGCAAAGGTC
59.461
52.381
0.00
0.00
0.00
3.85
3179
6518
0.106419
AGAAAACGGGGCAAAGGTCA
60.106
50.000
0.00
0.00
0.00
4.02
3180
6519
0.031585
GAAAACGGGGCAAAGGTCAC
59.968
55.000
0.00
0.00
0.00
3.67
3181
6520
0.684805
AAAACGGGGCAAAGGTCACA
60.685
50.000
0.00
0.00
0.00
3.58
3182
6521
1.106944
AAACGGGGCAAAGGTCACAG
61.107
55.000
0.00
0.00
0.00
3.66
3183
6522
2.672996
CGGGGCAAAGGTCACAGG
60.673
66.667
0.00
0.00
0.00
4.00
3184
6523
2.283173
GGGGCAAAGGTCACAGGG
60.283
66.667
0.00
0.00
0.00
4.45
3186
6525
2.203480
GGCAAAGGTCACAGGGCA
60.203
61.111
0.00
0.00
0.00
5.36
3198
6561
3.568007
GTCACAGGGCAGTTTTCACATTA
59.432
43.478
0.00
0.00
0.00
1.90
3199
6562
3.820467
TCACAGGGCAGTTTTCACATTAG
59.180
43.478
0.00
0.00
0.00
1.73
3201
6564
2.094545
CAGGGCAGTTTTCACATTAGCC
60.095
50.000
0.00
0.00
39.86
3.93
3203
6566
1.204704
GGCAGTTTTCACATTAGCCCC
59.795
52.381
0.00
0.00
34.71
5.80
3204
6567
1.135402
GCAGTTTTCACATTAGCCCCG
60.135
52.381
0.00
0.00
0.00
5.73
3205
6568
1.472480
CAGTTTTCACATTAGCCCCGG
59.528
52.381
0.00
0.00
0.00
5.73
3206
6569
1.074889
AGTTTTCACATTAGCCCCGGT
59.925
47.619
0.00
0.00
0.00
5.28
3208
6571
1.828979
TTTCACATTAGCCCCGGTTC
58.171
50.000
0.00
0.00
0.00
3.62
3209
6572
0.693622
TTCACATTAGCCCCGGTTCA
59.306
50.000
0.00
0.00
0.00
3.18
3210
6573
0.251916
TCACATTAGCCCCGGTTCAG
59.748
55.000
0.00
0.00
0.00
3.02
3211
6574
0.035439
CACATTAGCCCCGGTTCAGT
60.035
55.000
0.00
0.00
0.00
3.41
3212
6575
0.252197
ACATTAGCCCCGGTTCAGTC
59.748
55.000
0.00
0.00
0.00
3.51
3213
6576
0.251916
CATTAGCCCCGGTTCAGTCA
59.748
55.000
0.00
0.00
0.00
3.41
3214
6577
0.252197
ATTAGCCCCGGTTCAGTCAC
59.748
55.000
0.00
0.00
0.00
3.67
3215
6578
2.162338
TTAGCCCCGGTTCAGTCACG
62.162
60.000
0.00
0.00
0.00
4.35
3216
6579
3.998672
GCCCCGGTTCAGTCACGA
61.999
66.667
0.00
0.00
0.00
4.35
3217
6580
2.738480
CCCCGGTTCAGTCACGAA
59.262
61.111
0.00
0.00
0.00
3.85
3222
6585
3.946907
GTTCAGTCACGAACCGGG
58.053
61.111
6.32
0.00
39.52
5.73
3223
6586
1.364901
GTTCAGTCACGAACCGGGA
59.635
57.895
6.32
0.00
39.52
5.14
3228
6591
2.605295
TCACGAACCGGGACCCAT
60.605
61.111
12.15
0.00
32.99
4.00
3230
6593
1.143183
CACGAACCGGGACCCATAG
59.857
63.158
12.15
0.47
28.17
2.23
3242
6605
4.800554
CCATAGGGGCATTCGTCC
57.199
61.111
0.00
0.00
35.48
4.79
3248
6611
2.822701
GGGCATTCGTCCCGGTTC
60.823
66.667
0.00
0.00
33.43
3.62
3249
6612
3.192922
GGCATTCGTCCCGGTTCG
61.193
66.667
0.00
4.79
0.00
3.95
3251
6614
2.736682
GCATTCGTCCCGGTTCGTG
61.737
63.158
13.60
8.10
0.00
4.35
3252
6615
1.080366
CATTCGTCCCGGTTCGTGA
60.080
57.895
13.60
6.24
0.00
4.35
3253
6616
1.076533
CATTCGTCCCGGTTCGTGAG
61.077
60.000
13.60
3.53
0.00
3.51
3254
6617
2.830704
ATTCGTCCCGGTTCGTGAGC
62.831
60.000
13.60
0.00
0.00
4.26
3258
6621
4.760047
CCCGGTTCGTGAGCCCAG
62.760
72.222
0.00
0.00
0.00
4.45
3259
6622
4.760047
CCGGTTCGTGAGCCCAGG
62.760
72.222
0.00
0.00
0.00
4.45
3260
6623
4.760047
CGGTTCGTGAGCCCAGGG
62.760
72.222
0.00
0.00
0.00
4.45
3261
6624
4.410400
GGTTCGTGAGCCCAGGGG
62.410
72.222
7.91
3.48
38.57
4.79
3292
6655
4.402528
TCGTGGGCATTGGTCCCG
62.403
66.667
0.00
0.00
46.92
5.14
3294
6657
4.360405
GTGGGCATTGGTCCCGGT
62.360
66.667
0.00
0.00
46.92
5.28
3295
6658
3.585428
TGGGCATTGGTCCCGGTT
61.585
61.111
0.00
0.00
46.92
4.44
3297
6660
3.131478
GGCATTGGTCCCGGTTCG
61.131
66.667
0.00
0.00
0.00
3.95
3298
6661
2.359478
GCATTGGTCCCGGTTCGT
60.359
61.111
0.00
0.00
0.00
3.85
3300
6663
0.463116
GCATTGGTCCCGGTTCGTAT
60.463
55.000
0.00
0.00
0.00
3.06
3301
6664
1.295792
CATTGGTCCCGGTTCGTATG
58.704
55.000
0.00
0.00
0.00
2.39
3302
6665
0.179468
ATTGGTCCCGGTTCGTATGG
59.821
55.000
0.00
0.00
0.00
2.74
3303
6666
0.903924
TTGGTCCCGGTTCGTATGGA
60.904
55.000
0.00
0.00
0.00
3.41
3304
6667
0.903924
TGGTCCCGGTTCGTATGGAA
60.904
55.000
0.00
0.00
0.00
3.53
3315
6678
2.993937
TCGTATGGAACCATTTGTCCC
58.006
47.619
11.68
0.00
37.82
4.46
3316
6679
1.668751
CGTATGGAACCATTTGTCCCG
59.331
52.381
11.68
2.53
37.82
5.14
3317
6680
2.021457
GTATGGAACCATTTGTCCCGG
58.979
52.381
11.68
0.00
37.82
5.73
3318
6681
0.407918
ATGGAACCATTTGTCCCGGT
59.592
50.000
0.00
0.00
31.82
5.28
3319
6682
0.186386
TGGAACCATTTGTCCCGGTT
59.814
50.000
0.00
0.00
45.64
4.44
3321
6684
0.519961
GAACCATTTGTCCCGGTTCG
59.480
55.000
0.00
0.00
46.63
3.95
3322
6685
0.108963
AACCATTTGTCCCGGTTCGA
59.891
50.000
0.00
0.00
38.69
3.71
3323
6686
0.321298
ACCATTTGTCCCGGTTCGAG
60.321
55.000
0.00
0.00
0.00
4.04
3324
6687
1.644786
CCATTTGTCCCGGTTCGAGC
61.645
60.000
0.00
0.00
0.00
5.03
3325
6688
1.376812
ATTTGTCCCGGTTCGAGCC
60.377
57.895
8.48
8.48
0.00
4.70
3326
6689
2.119484
ATTTGTCCCGGTTCGAGCCA
62.119
55.000
19.03
0.00
0.00
4.75
3327
6690
2.999739
TTTGTCCCGGTTCGAGCCAC
63.000
60.000
19.03
9.54
0.00
5.01
3338
6701
3.692406
GAGCCACGAACCGGGACT
61.692
66.667
6.32
0.00
28.17
3.85
3339
6702
2.283388
AGCCACGAACCGGGACTA
60.283
61.111
6.32
0.00
28.17
2.59
3340
6703
1.880819
GAGCCACGAACCGGGACTAA
61.881
60.000
6.32
0.00
28.17
2.24
3341
6704
1.219935
GCCACGAACCGGGACTAAT
59.780
57.895
6.32
0.00
28.17
1.73
3343
6706
0.461339
CCACGAACCGGGACTAATGG
60.461
60.000
6.32
1.45
28.17
3.16
3345
6708
0.533951
ACGAACCGGGACTAATGGTC
59.466
55.000
6.32
0.00
43.79
4.02
3353
6716
3.969995
GACTAATGGTCCTCGCTCC
57.030
57.895
0.00
0.00
38.93
4.70
3357
6720
1.686325
TAATGGTCCTCGCTCCTGGC
61.686
60.000
0.00
0.00
37.64
4.85
3364
6727
4.329545
TCGCTCCTGGCCCACAAC
62.330
66.667
0.00
0.00
37.74
3.32
3366
6729
4.284550
GCTCCTGGCCCACAACCA
62.285
66.667
0.00
0.00
35.40
3.67
3367
6730
2.765969
CTCCTGGCCCACAACCAT
59.234
61.111
0.00
0.00
36.36
3.55
3368
6731
1.077265
CTCCTGGCCCACAACCATT
59.923
57.895
0.00
0.00
36.36
3.16
3369
6732
0.542702
CTCCTGGCCCACAACCATTT
60.543
55.000
0.00
0.00
36.36
2.32
3370
6733
0.831288
TCCTGGCCCACAACCATTTG
60.831
55.000
0.00
0.00
36.36
2.32
3372
6735
0.318120
CTGGCCCACAACCATTTGTC
59.682
55.000
0.00
0.00
44.57
3.18
3373
6736
1.118356
TGGCCCACAACCATTTGTCC
61.118
55.000
0.00
0.00
44.57
4.02
3375
6738
1.963679
CCCACAACCATTTGTCCCG
59.036
57.895
0.00
0.00
44.57
5.14
3376
6739
1.531739
CCCACAACCATTTGTCCCGG
61.532
60.000
0.00
0.00
44.57
5.73
3377
6740
0.825840
CCACAACCATTTGTCCCGGT
60.826
55.000
0.00
0.00
44.57
5.28
3378
6741
1.036707
CACAACCATTTGTCCCGGTT
58.963
50.000
0.00
0.00
44.57
4.44
3379
6742
1.000717
CACAACCATTTGTCCCGGTTC
60.001
52.381
0.00
0.00
44.57
3.62
3383
6746
0.887933
CCATTTGTCCCGGTTCTTGG
59.112
55.000
0.00
0.00
0.00
3.61
3385
6748
0.178975
ATTTGTCCCGGTTCTTGGCA
60.179
50.000
0.00
0.00
0.00
4.92
3386
6749
0.178975
TTTGTCCCGGTTCTTGGCAT
60.179
50.000
0.00
0.00
0.00
4.40
3387
6750
0.893270
TTGTCCCGGTTCTTGGCATG
60.893
55.000
0.00
0.00
0.00
4.06
3389
6752
0.608035
GTCCCGGTTCTTGGCATGAA
60.608
55.000
11.38
11.38
0.00
2.57
3390
6753
0.608035
TCCCGGTTCTTGGCATGAAC
60.608
55.000
28.54
28.54
42.00
3.18
3394
6757
1.883021
GTTCTTGGCATGAACCGGG
59.117
57.895
27.05
0.00
38.19
5.73
3395
6758
0.608035
GTTCTTGGCATGAACCGGGA
60.608
55.000
27.05
1.22
38.19
5.14
3396
6759
0.608035
TTCTTGGCATGAACCGGGAC
60.608
55.000
6.32
0.00
0.00
4.46
3397
6760
1.303236
CTTGGCATGAACCGGGACA
60.303
57.895
6.32
5.75
0.00
4.02
3398
6761
1.303236
TTGGCATGAACCGGGACAG
60.303
57.895
6.32
1.30
0.00
3.51
3399
6762
1.773856
TTGGCATGAACCGGGACAGA
61.774
55.000
6.32
0.00
0.00
3.41
3400
6763
1.002624
GGCATGAACCGGGACAGAA
60.003
57.895
6.32
0.00
0.00
3.02
3401
6764
1.026718
GGCATGAACCGGGACAGAAG
61.027
60.000
6.32
1.42
0.00
2.85
3402
6765
1.026718
GCATGAACCGGGACAGAAGG
61.027
60.000
6.32
0.00
0.00
3.46
3403
6766
1.026718
CATGAACCGGGACAGAAGGC
61.027
60.000
6.32
0.00
0.00
4.35
3404
6767
2.046217
GAACCGGGACAGAAGGCC
60.046
66.667
6.32
0.00
0.00
5.19
3405
6768
3.623703
GAACCGGGACAGAAGGCCC
62.624
68.421
6.32
0.00
41.11
5.80
3411
6774
1.303282
GGACAGAAGGCCCGGATTT
59.697
57.895
0.73
0.00
0.00
2.17
3413
6776
1.475213
GGACAGAAGGCCCGGATTTAG
60.475
57.143
0.73
0.00
0.00
1.85
3414
6777
1.209747
GACAGAAGGCCCGGATTTAGT
59.790
52.381
0.73
0.00
0.00
2.24
3416
6779
2.169978
ACAGAAGGCCCGGATTTAGTAC
59.830
50.000
0.73
0.00
0.00
2.73
3417
6780
1.767088
AGAAGGCCCGGATTTAGTACC
59.233
52.381
0.73
0.00
0.00
3.34
3426
6789
2.542595
CGGATTTAGTACCGGTTCATGC
59.457
50.000
15.04
1.59
44.59
4.06
3427
6790
2.876550
GGATTTAGTACCGGTTCATGCC
59.123
50.000
15.04
2.33
0.00
4.40
3428
6791
3.537580
GATTTAGTACCGGTTCATGCCA
58.462
45.455
15.04
0.00
0.00
4.92
3429
6792
2.389962
TTAGTACCGGTTCATGCCAC
57.610
50.000
15.04
1.99
0.00
5.01
3432
6795
0.671163
GTACCGGTTCATGCCACGAA
60.671
55.000
15.04
0.00
0.00
3.85
3436
6799
2.867472
GTTCATGCCACGAACCGG
59.133
61.111
0.00
0.00
37.40
5.28
3437
6800
2.359354
TTCATGCCACGAACCGGG
60.359
61.111
6.32
0.00
0.00
5.73
3439
6802
3.124921
CATGCCACGAACCGGGAC
61.125
66.667
6.32
0.00
28.17
4.46
3440
6803
4.404098
ATGCCACGAACCGGGACC
62.404
66.667
6.32
0.00
28.17
4.46
3443
6806
2.349755
CCACGAACCGGGACCAAT
59.650
61.111
6.32
0.00
28.17
3.16
3445
6808
1.004320
CACGAACCGGGACCAATGA
60.004
57.895
6.32
0.00
28.17
2.57
3446
6809
1.019278
CACGAACCGGGACCAATGAG
61.019
60.000
6.32
0.00
28.17
2.90
3468
6869
3.244112
GGTGCCTATATATACCCCATCGC
60.244
52.174
0.00
0.00
0.00
4.58
3469
6870
2.969950
TGCCTATATATACCCCATCGCC
59.030
50.000
0.00
0.00
0.00
5.54
3471
6872
3.244112
GCCTATATATACCCCATCGCCAC
60.244
52.174
0.00
0.00
0.00
5.01
3472
6873
3.005472
CCTATATATACCCCATCGCCACG
59.995
52.174
0.00
0.00
0.00
4.94
3473
6874
1.187974
TATATACCCCATCGCCACGG
58.812
55.000
0.00
0.00
0.00
4.94
3474
6875
2.180159
ATATACCCCATCGCCACGGC
62.180
60.000
0.00
0.00
37.85
5.68
3485
6886
4.007644
CCACGGCAGAGCACTCCA
62.008
66.667
0.00
0.00
0.00
3.86
3486
6887
2.740055
CACGGCAGAGCACTCCAC
60.740
66.667
0.00
0.00
0.00
4.02
3487
6888
3.233980
ACGGCAGAGCACTCCACA
61.234
61.111
0.00
0.00
0.00
4.17
3488
6889
2.433838
CGGCAGAGCACTCCACAG
60.434
66.667
0.00
0.00
0.00
3.66
3506
6907
3.892918
CAGTGCTCTGTTTTTCTCTGG
57.107
47.619
7.63
0.00
36.97
3.86
3507
6908
2.031333
CAGTGCTCTGTTTTTCTCTGGC
60.031
50.000
7.63
0.00
36.97
4.85
3508
6909
1.268079
GTGCTCTGTTTTTCTCTGGCC
59.732
52.381
0.00
0.00
0.00
5.36
3510
6911
1.160137
CTCTGTTTTTCTCTGGCCGG
58.840
55.000
4.71
4.71
0.00
6.13
3512
6913
2.187599
CTGTTTTTCTCTGGCCGGCG
62.188
60.000
22.54
7.85
0.00
6.46
3513
6914
1.964373
GTTTTTCTCTGGCCGGCGA
60.964
57.895
22.54
17.25
0.00
5.54
3514
6915
1.671054
TTTTTCTCTGGCCGGCGAG
60.671
57.895
30.61
30.61
0.00
5.03
3527
6928
4.035102
GCGAGGGGAGGGCTTTGT
62.035
66.667
0.00
0.00
0.00
2.83
3528
6929
2.045926
CGAGGGGAGGGCTTTGTG
60.046
66.667
0.00
0.00
0.00
3.33
3530
6931
2.452491
AGGGGAGGGCTTTGTGGT
60.452
61.111
0.00
0.00
0.00
4.16
3531
6932
2.283173
GGGGAGGGCTTTGTGGTG
60.283
66.667
0.00
0.00
0.00
4.17
3534
6935
1.973812
GGAGGGCTTTGTGGTGCTC
60.974
63.158
0.00
0.00
0.00
4.26
3535
6936
1.073897
GAGGGCTTTGTGGTGCTCT
59.926
57.895
0.00
0.00
43.51
4.09
3536
6937
0.324943
GAGGGCTTTGTGGTGCTCTA
59.675
55.000
0.00
0.00
40.52
2.43
3537
6938
0.326264
AGGGCTTTGTGGTGCTCTAG
59.674
55.000
0.00
0.00
38.38
2.43
3539
6940
0.322008
GGCTTTGTGGTGCTCTAGCT
60.322
55.000
3.26
0.00
42.66
3.32
3547
7104
0.686112
GGTGCTCTAGCTCACCTCCT
60.686
60.000
19.69
0.00
46.90
3.69
3548
7105
1.410365
GGTGCTCTAGCTCACCTCCTA
60.410
57.143
19.69
0.00
46.90
2.94
3549
7106
2.593026
GTGCTCTAGCTCACCTCCTAT
58.407
52.381
3.26
0.00
42.66
2.57
3552
7109
2.591923
CTCTAGCTCACCTCCTATGCA
58.408
52.381
0.00
0.00
0.00
3.96
3555
7112
1.504912
AGCTCACCTCCTATGCACAT
58.495
50.000
0.00
0.00
0.00
3.21
3556
7113
1.140452
AGCTCACCTCCTATGCACATG
59.860
52.381
0.00
0.00
0.00
3.21
3574
7131
3.127548
ACATGAGGTGTTCGATGAAATGC
59.872
43.478
0.00
0.00
38.01
3.56
3575
7132
2.083774
TGAGGTGTTCGATGAAATGCC
58.916
47.619
0.00
0.00
0.00
4.40
3576
7133
1.401905
GAGGTGTTCGATGAAATGCCC
59.598
52.381
0.00
0.00
0.00
5.36
3577
7134
0.098728
GGTGTTCGATGAAATGCCCG
59.901
55.000
0.00
0.00
0.00
6.13
3578
7135
1.083489
GTGTTCGATGAAATGCCCGA
58.917
50.000
0.00
0.00
0.00
5.14
3579
7136
1.062587
GTGTTCGATGAAATGCCCGAG
59.937
52.381
0.00
0.00
32.41
4.63
3580
7137
0.028110
GTTCGATGAAATGCCCGAGC
59.972
55.000
0.00
0.00
40.48
5.03
3581
7138
1.095228
TTCGATGAAATGCCCGAGCC
61.095
55.000
0.00
0.00
38.69
4.70
3582
7139
1.819208
CGATGAAATGCCCGAGCCA
60.819
57.895
0.00
0.00
38.69
4.75
3583
7140
1.729881
GATGAAATGCCCGAGCCAC
59.270
57.895
0.00
0.00
38.69
5.01
3585
7142
1.315257
ATGAAATGCCCGAGCCACAC
61.315
55.000
0.00
0.00
38.69
3.82
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
179
185
6.916360
ATGTTTTTATCTGCTTTTCAGGGA
57.084
33.333
0.00
0.00
43.06
4.20
203
210
6.918067
TGTCTGGAGATAATCATCCGTTAT
57.082
37.500
0.00
0.00
38.52
1.89
232
239
4.823989
GCTGAATTCCCTTATGCATACACT
59.176
41.667
5.74
0.00
0.00
3.55
234
241
4.144297
GGCTGAATTCCCTTATGCATACA
58.856
43.478
5.74
0.00
0.00
2.29
243
1735
3.478540
GCTACGGCTGAATTCCCTT
57.521
52.632
0.00
0.00
35.22
3.95
269
1761
3.702048
CCACCGGGAGAGCGGAAA
61.702
66.667
6.32
0.00
35.59
3.13
274
1766
1.218316
CAGTTACCACCGGGAGAGC
59.782
63.158
6.32
0.00
38.05
4.09
303
1795
2.552599
TCCGCTGTGTAAAACCATGA
57.447
45.000
0.00
0.00
0.00
3.07
315
1807
2.431057
ACCGATCTTTATCTTCCGCTGT
59.569
45.455
0.00
0.00
0.00
4.40
467
1959
4.108570
ACCCCTAGATTGATTGTACACCA
58.891
43.478
0.00
0.00
0.00
4.17
520
2015
5.423290
AGCTGGATGTGCATATATAGCTACA
59.577
40.000
23.50
1.17
38.38
2.74
521
2016
5.752472
CAGCTGGATGTGCATATATAGCTAC
59.248
44.000
23.98
1.65
38.11
3.58
522
2017
5.163374
CCAGCTGGATGTGCATATATAGCTA
60.163
44.000
29.88
0.00
38.11
3.32
584
2153
3.518634
TTTGTTTCTGGTGTTTGGCTC
57.481
42.857
0.00
0.00
0.00
4.70
621
2192
1.211457
CTCTTCATGCTACCCCTGCTT
59.789
52.381
0.00
0.00
0.00
3.91
642
2213
9.715123
TCATTCTTTTTAACGTATGCATATGTG
57.285
29.630
27.92
16.23
33.07
3.21
643
2214
9.935682
CTCATTCTTTTTAACGTATGCATATGT
57.064
29.630
23.14
23.14
34.12
2.29
646
2217
9.982291
GTTCTCATTCTTTTTAACGTATGCATA
57.018
29.630
1.16
1.16
0.00
3.14
647
2218
8.511321
TGTTCTCATTCTTTTTAACGTATGCAT
58.489
29.630
3.79
3.79
0.00
3.96
648
2219
7.866729
TGTTCTCATTCTTTTTAACGTATGCA
58.133
30.769
0.00
0.00
0.00
3.96
649
2220
8.722342
TTGTTCTCATTCTTTTTAACGTATGC
57.278
30.769
0.00
0.00
0.00
3.14
652
2223
9.505995
GGTTTTGTTCTCATTCTTTTTAACGTA
57.494
29.630
0.00
0.00
0.00
3.57
653
2224
8.030106
TGGTTTTGTTCTCATTCTTTTTAACGT
58.970
29.630
0.00
0.00
0.00
3.99
654
2225
8.401046
TGGTTTTGTTCTCATTCTTTTTAACG
57.599
30.769
0.00
0.00
0.00
3.18
656
2227
9.936759
ACTTGGTTTTGTTCTCATTCTTTTTAA
57.063
25.926
0.00
0.00
0.00
1.52
659
2230
9.533253
CATACTTGGTTTTGTTCTCATTCTTTT
57.467
29.630
0.00
0.00
0.00
2.27
660
2231
7.653311
GCATACTTGGTTTTGTTCTCATTCTTT
59.347
33.333
0.00
0.00
0.00
2.52
661
2232
7.147976
GCATACTTGGTTTTGTTCTCATTCTT
58.852
34.615
0.00
0.00
0.00
2.52
662
2233
6.265196
TGCATACTTGGTTTTGTTCTCATTCT
59.735
34.615
0.00
0.00
0.00
2.40
663
2234
6.446318
TGCATACTTGGTTTTGTTCTCATTC
58.554
36.000
0.00
0.00
0.00
2.67
664
2235
6.403866
TGCATACTTGGTTTTGTTCTCATT
57.596
33.333
0.00
0.00
0.00
2.57
665
2236
6.403866
TTGCATACTTGGTTTTGTTCTCAT
57.596
33.333
0.00
0.00
0.00
2.90
666
2237
5.843673
TTGCATACTTGGTTTTGTTCTCA
57.156
34.783
0.00
0.00
0.00
3.27
667
2238
6.583806
CAGATTGCATACTTGGTTTTGTTCTC
59.416
38.462
0.00
0.00
0.00
2.87
668
2239
6.449698
CAGATTGCATACTTGGTTTTGTTCT
58.550
36.000
0.00
0.00
0.00
3.01
669
2240
5.634859
CCAGATTGCATACTTGGTTTTGTTC
59.365
40.000
0.00
0.00
0.00
3.18
670
2241
5.540911
CCAGATTGCATACTTGGTTTTGTT
58.459
37.500
0.00
0.00
0.00
2.83
671
2242
4.561326
GCCAGATTGCATACTTGGTTTTGT
60.561
41.667
8.31
0.00
0.00
2.83
672
2243
3.928375
GCCAGATTGCATACTTGGTTTTG
59.072
43.478
8.31
0.00
0.00
2.44
675
2246
2.806434
TGCCAGATTGCATACTTGGTT
58.194
42.857
8.31
0.00
36.04
3.67
716
2323
4.021368
GGTGACAAGTAGCTAGGTTTCTCA
60.021
45.833
0.00
0.00
0.00
3.27
762
2369
4.519540
ACAACTATGCATTGTTTGTCCC
57.480
40.909
21.50
0.00
36.93
4.46
948
2569
2.590821
GTGATGGCAATATTGGAGGCT
58.409
47.619
17.02
0.00
0.00
4.58
991
2640
0.178906
TGGTCTGTCATGGTGGAGGA
60.179
55.000
0.00
0.00
0.00
3.71
1096
2751
0.982852
TCATCGAGCACCTTGGGGAT
60.983
55.000
0.00
0.00
36.25
3.85
1125
2780
1.449601
ATCTTCAATCGCCGCGGTT
60.450
52.632
28.70
9.67
0.00
4.44
1271
2927
1.095807
GGCCTTCCAATAGCCGACAC
61.096
60.000
0.00
0.00
36.84
3.67
1308
2964
0.178975
TGAGTGGCGGGTGGAAAATT
60.179
50.000
0.00
0.00
0.00
1.82
1311
2967
2.112297
GTGAGTGGCGGGTGGAAA
59.888
61.111
0.00
0.00
0.00
3.13
1323
2979
2.895680
ATGCCGATGAGCGTGAGT
59.104
55.556
0.00
0.00
38.67
3.41
1379
3039
1.296715
CAGTTGGTCTTCTCCCCCG
59.703
63.158
0.00
0.00
0.00
5.73
1432
3092
0.741221
GACGGGTTGGATGTCAGCTC
60.741
60.000
0.00
0.00
32.91
4.09
1482
3142
3.412237
TTATATACCTTGGAAGCCGCC
57.588
47.619
0.00
0.00
0.00
6.13
1582
3331
6.621514
AGAGTAATATTCAGGTGGGGATTCTT
59.378
38.462
0.00
0.00
0.00
2.52
1701
3450
9.838339
CTCTCTTTTACCCATACATTCAAGTAT
57.162
33.333
0.00
0.00
35.14
2.12
1757
3507
1.135721
GGCGGTATTTACTCACCTCGT
59.864
52.381
0.00
0.00
32.29
4.18
1841
3593
4.654262
CCTAGGCCTCTACTCCAACATTTA
59.346
45.833
9.68
0.00
0.00
1.40
1854
3607
1.623625
CTGACTCCCCTAGGCCTCT
59.376
63.158
9.68
0.00
28.59
3.69
1905
3658
2.700353
TAGGTATTTAGGCGGCCCTA
57.300
50.000
17.02
5.25
42.87
3.53
1923
3677
7.777440
TGTTCAGCACACATATCCCATAATTTA
59.223
33.333
0.00
0.00
0.00
1.40
1926
3680
5.693961
TGTTCAGCACACATATCCCATAAT
58.306
37.500
0.00
0.00
0.00
1.28
1938
3692
1.069432
CACTGCTCATGTTCAGCACAC
60.069
52.381
14.00
0.00
42.09
3.82
2001
3757
3.246301
ACTATGATCAGTAGCATGCCCT
58.754
45.455
15.66
7.97
32.88
5.19
2045
3801
3.270877
CCACTGTTCCTACAAGCATACC
58.729
50.000
0.00
0.00
32.92
2.73
2144
3900
0.035725
CCTGCTGATGTTCTGCTCCA
60.036
55.000
7.70
0.00
41.21
3.86
2166
3922
7.069331
AGGAGGAAATGTATCTAAGTCAGTGAG
59.931
40.741
0.00
0.00
0.00
3.51
2169
3925
7.129425
AGAGGAGGAAATGTATCTAAGTCAGT
58.871
38.462
0.00
0.00
0.00
3.41
2171
3927
7.126061
TGAGAGGAGGAAATGTATCTAAGTCA
58.874
38.462
0.00
0.00
0.00
3.41
2186
3942
3.205282
TGTCATAGTCCATGAGAGGAGGA
59.795
47.826
0.00
0.00
44.42
3.71
2344
4100
2.614987
GGGTCTGATATCATCTGCTGGC
60.615
54.545
5.72
0.00
0.00
4.85
2381
4140
6.209192
TCATTTGCTGATGTTGTTGGTAGAAT
59.791
34.615
0.00
0.00
0.00
2.40
2402
4170
8.608598
TGATCTTCACCCATATACATCATCATT
58.391
33.333
0.00
0.00
0.00
2.57
2422
4190
3.369892
CCCGACCATGAAACTCTGATCTT
60.370
47.826
0.00
0.00
0.00
2.40
2430
4198
0.988832
TTAGCCCCGACCATGAAACT
59.011
50.000
0.00
0.00
0.00
2.66
2471
4239
1.340405
GCATCCTCCTGTGACACCATT
60.340
52.381
2.45
0.00
0.00
3.16
2542
4310
0.946221
CACTGACGAGGTCTTGCCAC
60.946
60.000
0.00
0.00
40.61
5.01
2585
4353
9.775854
CTTGGATTATCTGATCATCAGTACTTT
57.224
33.333
14.56
0.00
44.58
2.66
2613
4381
6.981559
ACGCACACACACACATATATATGTTA
59.018
34.615
23.03
0.00
43.99
2.41
2634
4404
7.089538
CCATGGATTATAAATTTATGCACGCA
58.910
34.615
18.98
0.00
0.00
5.24
2635
4405
6.531240
CCCATGGATTATAAATTTATGCACGC
59.469
38.462
15.22
5.67
0.00
5.34
2648
4418
2.600790
ACGACCGTCCCATGGATTATA
58.399
47.619
15.22
0.00
32.73
0.98
2658
4428
2.415090
CCATATATCGAACGACCGTCCC
60.415
54.545
0.00
0.00
0.00
4.46
2659
4429
2.860062
CCATATATCGAACGACCGTCC
58.140
52.381
0.00
0.00
0.00
4.79
2726
4497
2.351111
GACTGCATGCAAACTCTCTAGC
59.649
50.000
22.88
0.00
0.00
3.42
2746
4528
2.182827
ACTAGCACAAGAGAGGCATGA
58.817
47.619
0.00
0.00
0.00
3.07
2858
4648
4.621034
GGTTTAAAAGATGCATGTTGTCCG
59.379
41.667
10.21
0.00
0.00
4.79
2860
4650
8.028938
ACATAGGTTTAAAAGATGCATGTTGTC
58.971
33.333
10.21
0.00
0.00
3.18
2911
4701
6.348498
GCCCAAACATATAATGGAAAAGCTT
58.652
36.000
0.00
0.00
36.27
3.74
2913
4704
4.744631
CGCCCAAACATATAATGGAAAAGC
59.255
41.667
2.91
0.00
36.27
3.51
2914
4705
5.748152
CACGCCCAAACATATAATGGAAAAG
59.252
40.000
2.91
0.00
36.27
2.27
2941
4749
0.253160
TGGCAATCCCTCTAGGTGGT
60.253
55.000
0.00
0.00
36.75
4.16
2942
4750
1.143813
ATGGCAATCCCTCTAGGTGG
58.856
55.000
0.00
0.00
36.75
4.61
2943
4751
2.705658
TGTATGGCAATCCCTCTAGGTG
59.294
50.000
0.00
0.00
36.75
4.00
3028
4891
7.763985
ACAAATGTTGACCCAAACTTTTAGAAG
59.236
33.333
0.00
0.00
36.07
2.85
3030
4893
7.038659
CACAAATGTTGACCCAAACTTTTAGA
58.961
34.615
0.00
0.00
36.07
2.10
3032
4895
6.109359
CCACAAATGTTGACCCAAACTTTTA
58.891
36.000
0.00
0.00
36.07
1.52
3036
4899
2.158971
GCCACAAATGTTGACCCAAACT
60.159
45.455
0.00
0.00
0.00
2.66
3043
4906
2.584791
GACATCGCCACAAATGTTGAC
58.415
47.619
0.00
0.00
36.28
3.18
3044
4907
1.539388
GGACATCGCCACAAATGTTGA
59.461
47.619
0.00
0.00
36.28
3.18
3045
4908
1.269174
TGGACATCGCCACAAATGTTG
59.731
47.619
0.00
0.00
36.28
3.33
3048
4911
1.733389
GCTTGGACATCGCCACAAATG
60.733
52.381
0.00
0.00
37.75
2.32
3076
4942
3.664107
TCAAACTGATGGTGTAGAGCAC
58.336
45.455
0.00
0.00
46.97
4.40
3111
4977
2.039787
TAGACCGGGCCCATGTCA
59.960
61.111
32.28
20.31
0.00
3.58
3136
6475
1.625315
AGTGTGAGATGCCAGCTACAA
59.375
47.619
0.00
0.00
0.00
2.41
3137
6476
1.269958
AGTGTGAGATGCCAGCTACA
58.730
50.000
0.00
0.00
0.00
2.74
3138
6477
2.428890
ACTAGTGTGAGATGCCAGCTAC
59.571
50.000
0.00
0.00
0.00
3.58
3139
6478
2.739943
ACTAGTGTGAGATGCCAGCTA
58.260
47.619
0.00
0.00
0.00
3.32
3140
6479
1.566211
ACTAGTGTGAGATGCCAGCT
58.434
50.000
0.00
0.00
0.00
4.24
3142
6481
4.991153
TTCTACTAGTGTGAGATGCCAG
57.009
45.455
5.39
0.00
0.00
4.85
3144
6483
4.563184
CGTTTTCTACTAGTGTGAGATGCC
59.437
45.833
5.39
0.00
0.00
4.40
3145
6484
4.563184
CCGTTTTCTACTAGTGTGAGATGC
59.437
45.833
5.39
0.00
0.00
3.91
3146
6485
5.103000
CCCGTTTTCTACTAGTGTGAGATG
58.897
45.833
5.39
2.95
0.00
2.90
3147
6486
4.159879
CCCCGTTTTCTACTAGTGTGAGAT
59.840
45.833
5.39
0.00
0.00
2.75
3149
6488
3.846360
CCCCGTTTTCTACTAGTGTGAG
58.154
50.000
5.39
0.00
0.00
3.51
3151
6490
2.289195
TGCCCCGTTTTCTACTAGTGTG
60.289
50.000
5.39
0.00
0.00
3.82
3152
6491
1.972795
TGCCCCGTTTTCTACTAGTGT
59.027
47.619
5.39
0.00
0.00
3.55
3153
6492
2.754946
TGCCCCGTTTTCTACTAGTG
57.245
50.000
5.39
0.00
0.00
2.74
3154
6493
3.558533
CCTTTGCCCCGTTTTCTACTAGT
60.559
47.826
0.00
0.00
0.00
2.57
3155
6494
3.007635
CCTTTGCCCCGTTTTCTACTAG
58.992
50.000
0.00
0.00
0.00
2.57
3156
6495
2.372837
ACCTTTGCCCCGTTTTCTACTA
59.627
45.455
0.00
0.00
0.00
1.82
3157
6496
1.144298
ACCTTTGCCCCGTTTTCTACT
59.856
47.619
0.00
0.00
0.00
2.57
3160
6499
0.106419
TGACCTTTGCCCCGTTTTCT
60.106
50.000
0.00
0.00
0.00
2.52
3161
6500
0.031585
GTGACCTTTGCCCCGTTTTC
59.968
55.000
0.00
0.00
0.00
2.29
3162
6501
0.684805
TGTGACCTTTGCCCCGTTTT
60.685
50.000
0.00
0.00
0.00
2.43
3163
6502
1.076632
TGTGACCTTTGCCCCGTTT
60.077
52.632
0.00
0.00
0.00
3.60
3164
6503
1.528309
CTGTGACCTTTGCCCCGTT
60.528
57.895
0.00
0.00
0.00
4.44
3165
6504
2.113139
CTGTGACCTTTGCCCCGT
59.887
61.111
0.00
0.00
0.00
5.28
3166
6505
2.672996
CCTGTGACCTTTGCCCCG
60.673
66.667
0.00
0.00
0.00
5.73
3167
6506
2.283173
CCCTGTGACCTTTGCCCC
60.283
66.667
0.00
0.00
0.00
5.80
3168
6507
2.991540
GCCCTGTGACCTTTGCCC
60.992
66.667
0.00
0.00
0.00
5.36
3169
6508
2.203480
TGCCCTGTGACCTTTGCC
60.203
61.111
0.00
0.00
0.00
4.52
3170
6509
1.109323
AACTGCCCTGTGACCTTTGC
61.109
55.000
0.00
0.00
0.00
3.68
3171
6510
1.402787
AAACTGCCCTGTGACCTTTG
58.597
50.000
0.00
0.00
0.00
2.77
3174
6513
0.550914
TGAAAACTGCCCTGTGACCT
59.449
50.000
0.00
0.00
0.00
3.85
3175
6514
0.668535
GTGAAAACTGCCCTGTGACC
59.331
55.000
0.00
0.00
0.00
4.02
3176
6515
1.388547
TGTGAAAACTGCCCTGTGAC
58.611
50.000
0.00
0.00
0.00
3.67
3177
6516
2.363306
ATGTGAAAACTGCCCTGTGA
57.637
45.000
0.00
0.00
0.00
3.58
3178
6517
3.612479
GCTAATGTGAAAACTGCCCTGTG
60.612
47.826
0.00
0.00
0.00
3.66
3179
6518
2.558359
GCTAATGTGAAAACTGCCCTGT
59.442
45.455
0.00
0.00
0.00
4.00
3180
6519
2.094545
GGCTAATGTGAAAACTGCCCTG
60.095
50.000
0.00
0.00
33.45
4.45
3181
6520
2.171003
GGCTAATGTGAAAACTGCCCT
58.829
47.619
0.00
0.00
33.45
5.19
3182
6521
2.654749
GGCTAATGTGAAAACTGCCC
57.345
50.000
0.00
0.00
33.45
5.36
3183
6522
1.204704
GGGGCTAATGTGAAAACTGCC
59.795
52.381
0.00
0.00
38.28
4.85
3184
6523
1.135402
CGGGGCTAATGTGAAAACTGC
60.135
52.381
0.00
0.00
0.00
4.40
3186
6525
1.074889
ACCGGGGCTAATGTGAAAACT
59.925
47.619
6.32
0.00
0.00
2.66
3198
6561
4.003788
CGTGACTGAACCGGGGCT
62.004
66.667
6.32
0.00
0.00
5.19
3199
6562
3.524648
TTCGTGACTGAACCGGGGC
62.525
63.158
6.32
0.00
0.00
5.80
3201
6564
3.946907
GTTCGTGACTGAACCGGG
58.053
61.111
6.32
0.00
41.88
5.73
3205
6568
0.942884
GTCCCGGTTCGTGACTGAAC
60.943
60.000
0.00
10.38
45.91
3.18
3206
6569
1.364901
GTCCCGGTTCGTGACTGAA
59.635
57.895
0.00
0.00
36.72
3.02
3208
6571
2.048503
GGTCCCGGTTCGTGACTG
60.049
66.667
0.00
0.00
34.89
3.51
3209
6572
3.308705
GGGTCCCGGTTCGTGACT
61.309
66.667
0.00
0.00
34.89
3.41
3210
6573
1.606885
TATGGGTCCCGGTTCGTGAC
61.607
60.000
2.65
0.00
33.83
3.67
3211
6574
1.305129
TATGGGTCCCGGTTCGTGA
60.305
57.895
2.65
0.00
0.00
4.35
3212
6575
1.143183
CTATGGGTCCCGGTTCGTG
59.857
63.158
2.65
0.00
0.00
4.35
3213
6576
2.062177
CCTATGGGTCCCGGTTCGT
61.062
63.158
2.65
0.00
0.00
3.85
3214
6577
2.803817
CCCTATGGGTCCCGGTTCG
61.804
68.421
2.65
0.00
38.25
3.95
3215
6578
3.237414
CCCTATGGGTCCCGGTTC
58.763
66.667
2.65
0.00
38.25
3.62
3225
6588
1.073199
GGGACGAATGCCCCTATGG
59.927
63.158
0.00
0.00
39.81
2.74
3226
6589
4.800554
GGGACGAATGCCCCTATG
57.199
61.111
0.00
0.00
39.81
2.23
3239
6602
4.754667
GGGCTCACGAACCGGGAC
62.755
72.222
6.32
0.00
32.99
4.46
3242
6605
4.760047
CCTGGGCTCACGAACCGG
62.760
72.222
0.00
0.00
0.00
5.28
3244
6607
4.410400
CCCCTGGGCTCACGAACC
62.410
72.222
7.39
0.00
0.00
3.62
3245
6608
4.410400
CCCCCTGGGCTCACGAAC
62.410
72.222
7.39
0.00
35.35
3.95
3273
6636
2.438434
GGACCAATGCCCACGAGG
60.438
66.667
0.00
0.00
39.47
4.63
3274
6637
2.438434
GGGACCAATGCCCACGAG
60.438
66.667
0.00
0.00
45.31
4.18
3275
6638
4.402528
CGGGACCAATGCCCACGA
62.403
66.667
0.00
0.00
46.36
4.35
3277
6640
3.879180
AACCGGGACCAATGCCCAC
62.879
63.158
6.32
0.00
46.36
4.61
3278
6641
3.577334
GAACCGGGACCAATGCCCA
62.577
63.158
6.32
0.00
46.36
5.36
3279
6642
2.754254
GAACCGGGACCAATGCCC
60.754
66.667
6.32
0.00
42.41
5.36
3280
6643
2.524951
TACGAACCGGGACCAATGCC
62.525
60.000
6.32
0.00
0.00
4.40
3281
6644
0.463116
ATACGAACCGGGACCAATGC
60.463
55.000
6.32
0.00
0.00
3.56
3282
6645
1.295792
CATACGAACCGGGACCAATG
58.704
55.000
6.32
0.00
0.00
2.82
3283
6646
0.179468
CCATACGAACCGGGACCAAT
59.821
55.000
6.32
0.00
0.00
3.16
3284
6647
0.903924
TCCATACGAACCGGGACCAA
60.904
55.000
6.32
0.00
0.00
3.67
3285
6648
0.903924
TTCCATACGAACCGGGACCA
60.904
55.000
6.32
0.00
0.00
4.02
3286
6649
0.460811
GTTCCATACGAACCGGGACC
60.461
60.000
6.32
0.00
44.46
4.46
3287
6650
3.055144
GTTCCATACGAACCGGGAC
57.945
57.895
6.32
0.00
44.46
4.46
3293
6656
3.128068
GGGACAAATGGTTCCATACGAAC
59.872
47.826
4.67
0.00
45.54
3.95
3294
6657
3.349022
GGGACAAATGGTTCCATACGAA
58.651
45.455
4.67
0.00
45.54
3.85
3295
6658
2.678479
CGGGACAAATGGTTCCATACGA
60.678
50.000
4.67
0.00
46.73
3.43
3297
6660
2.021457
CCGGGACAAATGGTTCCATAC
58.979
52.381
4.67
0.00
46.73
2.39
3298
6661
1.636519
ACCGGGACAAATGGTTCCATA
59.363
47.619
6.32
0.00
46.73
2.74
3300
6663
0.186386
AACCGGGACAAATGGTTCCA
59.814
50.000
6.32
0.00
46.73
3.53
3301
6664
3.045518
AACCGGGACAAATGGTTCC
57.954
52.632
6.32
0.00
42.11
3.62
3304
6667
0.321298
CTCGAACCGGGACAAATGGT
60.321
55.000
6.32
0.00
37.68
3.55
3305
6668
1.644786
GCTCGAACCGGGACAAATGG
61.645
60.000
6.32
0.00
0.00
3.16
3306
6669
1.644786
GGCTCGAACCGGGACAAATG
61.645
60.000
6.32
0.00
34.24
2.32
3307
6670
1.376812
GGCTCGAACCGGGACAAAT
60.377
57.895
6.32
0.00
34.24
2.32
3308
6671
2.031465
GGCTCGAACCGGGACAAA
59.969
61.111
6.32
0.00
34.24
2.83
3309
6672
3.235481
TGGCTCGAACCGGGACAA
61.235
61.111
6.32
0.00
44.95
3.18
3310
6673
3.998672
GTGGCTCGAACCGGGACA
61.999
66.667
6.32
0.00
46.14
4.02
3321
6684
1.880819
TTAGTCCCGGTTCGTGGCTC
61.881
60.000
0.00
0.00
0.00
4.70
3322
6685
1.262640
ATTAGTCCCGGTTCGTGGCT
61.263
55.000
0.00
0.00
0.00
4.75
3323
6686
1.087771
CATTAGTCCCGGTTCGTGGC
61.088
60.000
0.00
0.00
0.00
5.01
3324
6687
0.461339
CCATTAGTCCCGGTTCGTGG
60.461
60.000
0.00
0.00
0.00
4.94
3325
6688
0.248289
ACCATTAGTCCCGGTTCGTG
59.752
55.000
0.00
0.00
0.00
4.35
3326
6689
0.533951
GACCATTAGTCCCGGTTCGT
59.466
55.000
0.00
0.00
39.84
3.85
3327
6690
3.357504
GACCATTAGTCCCGGTTCG
57.642
57.895
0.00
0.00
39.84
3.95
3335
6698
1.067821
CAGGAGCGAGGACCATTAGTC
59.932
57.143
0.00
0.00
45.51
2.59
3338
6701
1.686325
GCCAGGAGCGAGGACCATTA
61.686
60.000
0.00
0.00
0.00
1.90
3339
6702
3.036429
GCCAGGAGCGAGGACCATT
62.036
63.158
0.00
0.00
0.00
3.16
3340
6703
3.474570
GCCAGGAGCGAGGACCAT
61.475
66.667
0.00
0.00
0.00
3.55
3346
6709
4.020617
TTGTGGGCCAGGAGCGAG
62.021
66.667
6.40
0.00
45.17
5.03
3347
6710
4.329545
GTTGTGGGCCAGGAGCGA
62.330
66.667
6.40
0.00
45.17
4.93
3349
6712
3.590466
ATGGTTGTGGGCCAGGAGC
62.590
63.158
6.40
9.05
39.65
4.70
3350
6713
0.542702
AAATGGTTGTGGGCCAGGAG
60.543
55.000
6.40
0.00
39.65
3.69
3351
6714
0.831288
CAAATGGTTGTGGGCCAGGA
60.831
55.000
6.40
0.00
39.65
3.86
3352
6715
1.120795
ACAAATGGTTGTGGGCCAGG
61.121
55.000
6.40
0.00
46.40
4.45
3353
6716
2.439837
ACAAATGGTTGTGGGCCAG
58.560
52.632
6.40
0.00
46.40
4.85
3364
6727
0.887933
CCAAGAACCGGGACAAATGG
59.112
55.000
6.32
2.36
0.00
3.16
3365
6728
0.243636
GCCAAGAACCGGGACAAATG
59.756
55.000
6.32
0.00
0.00
2.32
3366
6729
0.178975
TGCCAAGAACCGGGACAAAT
60.179
50.000
6.32
0.00
0.00
2.32
3367
6730
0.178975
ATGCCAAGAACCGGGACAAA
60.179
50.000
6.32
0.00
0.00
2.83
3368
6731
0.893270
CATGCCAAGAACCGGGACAA
60.893
55.000
6.32
0.00
0.00
3.18
3369
6732
1.303236
CATGCCAAGAACCGGGACA
60.303
57.895
6.32
0.00
0.00
4.02
3370
6733
0.608035
TTCATGCCAAGAACCGGGAC
60.608
55.000
6.32
0.00
0.00
4.46
3371
6734
0.608035
GTTCATGCCAAGAACCGGGA
60.608
55.000
6.32
0.00
39.48
5.14
3372
6735
1.883021
GTTCATGCCAAGAACCGGG
59.117
57.895
6.32
0.00
39.48
5.73
3376
6739
0.608035
TCCCGGTTCATGCCAAGAAC
60.608
55.000
4.27
4.27
43.49
3.01
3377
6740
0.608035
GTCCCGGTTCATGCCAAGAA
60.608
55.000
0.00
0.00
0.00
2.52
3378
6741
1.002624
GTCCCGGTTCATGCCAAGA
60.003
57.895
0.00
0.00
0.00
3.02
3379
6742
1.303236
TGTCCCGGTTCATGCCAAG
60.303
57.895
0.00
0.00
0.00
3.61
3383
6746
1.026718
CCTTCTGTCCCGGTTCATGC
61.027
60.000
0.00
0.00
0.00
4.06
3385
6748
1.299976
GCCTTCTGTCCCGGTTCAT
59.700
57.895
0.00
0.00
0.00
2.57
3386
6749
2.747686
GCCTTCTGTCCCGGTTCA
59.252
61.111
0.00
0.00
0.00
3.18
3387
6750
2.046217
GGCCTTCTGTCCCGGTTC
60.046
66.667
0.00
0.00
0.00
3.62
3392
6755
2.211468
AAATCCGGGCCTTCTGTCCC
62.211
60.000
0.84
0.00
39.17
4.46
3394
6757
1.209747
ACTAAATCCGGGCCTTCTGTC
59.790
52.381
0.84
0.00
0.00
3.51
3395
6758
1.286248
ACTAAATCCGGGCCTTCTGT
58.714
50.000
0.84
0.00
0.00
3.41
3396
6759
2.484947
GGTACTAAATCCGGGCCTTCTG
60.485
54.545
0.84
0.00
0.00
3.02
3397
6760
1.767088
GGTACTAAATCCGGGCCTTCT
59.233
52.381
0.84
0.00
0.00
2.85
3398
6761
1.539712
CGGTACTAAATCCGGGCCTTC
60.540
57.143
0.84
0.00
42.61
3.46
3399
6762
0.466963
CGGTACTAAATCCGGGCCTT
59.533
55.000
0.84
0.00
42.61
4.35
3400
6763
2.130512
CGGTACTAAATCCGGGCCT
58.869
57.895
0.84
0.00
42.61
5.19
3401
6764
4.764896
CGGTACTAAATCCGGGCC
57.235
61.111
0.00
0.00
42.61
5.80
3405
6768
2.542595
GCATGAACCGGTACTAAATCCG
59.457
50.000
8.00
0.00
45.42
4.18
3406
6769
2.876550
GGCATGAACCGGTACTAAATCC
59.123
50.000
8.00
0.00
0.00
3.01
3407
6770
3.311596
GTGGCATGAACCGGTACTAAATC
59.688
47.826
8.00
0.00
0.00
2.17
3411
6774
0.173935
CGTGGCATGAACCGGTACTA
59.826
55.000
8.00
0.00
0.00
1.82
3413
6776
0.671163
TTCGTGGCATGAACCGGTAC
60.671
55.000
17.86
0.00
0.00
3.34
3414
6777
0.671163
GTTCGTGGCATGAACCGGTA
60.671
55.000
32.65
6.85
37.98
4.02
3416
6779
2.867472
GTTCGTGGCATGAACCGG
59.133
61.111
32.65
0.00
37.98
5.28
3419
6782
2.686816
CCCGGTTCGTGGCATGAAC
61.687
63.158
34.08
34.08
42.00
3.18
3420
6783
2.359354
CCCGGTTCGTGGCATGAA
60.359
61.111
17.86
17.86
0.00
2.57
3421
6784
3.315140
TCCCGGTTCGTGGCATGA
61.315
61.111
5.03
5.03
0.00
3.07
3422
6785
3.124921
GTCCCGGTTCGTGGCATG
61.125
66.667
0.00
0.00
0.00
4.06
3423
6786
4.404098
GGTCCCGGTTCGTGGCAT
62.404
66.667
0.00
0.00
0.00
4.40
3425
6788
3.912745
ATTGGTCCCGGTTCGTGGC
62.913
63.158
0.00
0.00
0.00
5.01
3426
6789
2.038269
CATTGGTCCCGGTTCGTGG
61.038
63.158
0.00
0.00
0.00
4.94
3427
6790
1.004320
TCATTGGTCCCGGTTCGTG
60.004
57.895
0.00
0.00
0.00
4.35
3428
6791
1.295423
CTCATTGGTCCCGGTTCGT
59.705
57.895
0.00
0.00
0.00
3.85
3429
6792
1.449601
CCTCATTGGTCCCGGTTCG
60.450
63.158
0.00
0.00
0.00
3.95
3439
6802
5.163195
GGGGTATATATAGGCACCTCATTGG
60.163
48.000
0.00
0.00
42.93
3.16
3440
6803
5.428457
TGGGGTATATATAGGCACCTCATTG
59.572
44.000
8.69
0.00
36.61
2.82
3441
6804
5.609782
TGGGGTATATATAGGCACCTCATT
58.390
41.667
8.69
0.00
36.61
2.57
3443
6806
4.703101
TGGGGTATATATAGGCACCTCA
57.297
45.455
8.69
8.69
39.24
3.86
3445
6808
4.223953
CGATGGGGTATATATAGGCACCT
58.776
47.826
8.52
0.00
0.00
4.00
3446
6809
3.244112
GCGATGGGGTATATATAGGCACC
60.244
52.174
0.00
0.00
0.00
5.01
3449
6812
2.969950
TGGCGATGGGGTATATATAGGC
59.030
50.000
0.00
0.00
0.00
3.93
3450
6813
3.005472
CGTGGCGATGGGGTATATATAGG
59.995
52.174
0.00
0.00
0.00
2.57
3451
6814
3.005472
CCGTGGCGATGGGGTATATATAG
59.995
52.174
0.00
0.00
0.00
1.31
3453
6816
1.760613
CCGTGGCGATGGGGTATATAT
59.239
52.381
0.00
0.00
0.00
0.86
3454
6817
1.187974
CCGTGGCGATGGGGTATATA
58.812
55.000
0.00
0.00
0.00
0.86
3455
6818
1.980052
CCGTGGCGATGGGGTATAT
59.020
57.895
0.00
0.00
0.00
0.86
3456
6819
2.874664
GCCGTGGCGATGGGGTATA
61.875
63.158
9.23
0.00
0.00
1.47
3457
6820
4.250305
GCCGTGGCGATGGGGTAT
62.250
66.667
9.23
0.00
0.00
2.73
3468
6869
4.007644
TGGAGTGCTCTGCCGTGG
62.008
66.667
4.77
0.00
0.00
4.94
3469
6870
2.740055
GTGGAGTGCTCTGCCGTG
60.740
66.667
4.77
0.00
0.00
4.94
3471
6872
2.433838
CTGTGGAGTGCTCTGCCG
60.434
66.667
4.77
0.00
0.00
5.69
3472
6873
1.670406
CACTGTGGAGTGCTCTGCC
60.670
63.158
4.77
1.67
43.24
4.85
3473
6874
3.963222
CACTGTGGAGTGCTCTGC
58.037
61.111
0.00
0.00
43.24
4.26
3487
6888
2.225467
GCCAGAGAAAAACAGAGCACT
58.775
47.619
0.00
0.00
0.00
4.40
3488
6889
1.268079
GGCCAGAGAAAAACAGAGCAC
59.732
52.381
0.00
0.00
0.00
4.40
3491
6892
1.160137
CCGGCCAGAGAAAAACAGAG
58.840
55.000
2.24
0.00
0.00
3.35
3492
6893
0.889186
GCCGGCCAGAGAAAAACAGA
60.889
55.000
18.11
0.00
0.00
3.41
3493
6894
1.581447
GCCGGCCAGAGAAAAACAG
59.419
57.895
18.11
0.00
0.00
3.16
3494
6895
2.258013
CGCCGGCCAGAGAAAAACA
61.258
57.895
23.46
0.00
0.00
2.83
3495
6896
1.912371
CTCGCCGGCCAGAGAAAAAC
61.912
60.000
23.46
0.00
36.65
2.43
3496
6897
1.671054
CTCGCCGGCCAGAGAAAAA
60.671
57.895
23.46
0.00
36.65
1.94
3497
6898
2.047274
CTCGCCGGCCAGAGAAAA
60.047
61.111
23.46
0.00
36.65
2.29
3498
6899
4.082523
CCTCGCCGGCCAGAGAAA
62.083
66.667
27.10
3.14
36.65
2.52
3510
6911
4.035102
ACAAAGCCCTCCCCTCGC
62.035
66.667
0.00
0.00
0.00
5.03
3512
6913
2.356667
CCACAAAGCCCTCCCCTC
59.643
66.667
0.00
0.00
0.00
4.30
3513
6914
2.452491
ACCACAAAGCCCTCCCCT
60.452
61.111
0.00
0.00
0.00
4.79
3514
6915
2.283173
CACCACAAAGCCCTCCCC
60.283
66.667
0.00
0.00
0.00
4.81
3516
6917
1.973812
GAGCACCACAAAGCCCTCC
60.974
63.158
0.00
0.00
0.00
4.30
3517
6918
0.324943
TAGAGCACCACAAAGCCCTC
59.675
55.000
0.00
0.00
0.00
4.30
3519
6920
1.308783
GCTAGAGCACCACAAAGCCC
61.309
60.000
0.00
0.00
41.59
5.19
3522
6923
2.072298
GTGAGCTAGAGCACCACAAAG
58.928
52.381
16.95
0.00
45.16
2.77
3523
6924
2.169832
GTGAGCTAGAGCACCACAAA
57.830
50.000
16.95
0.00
45.16
2.83
3524
6925
3.914984
GTGAGCTAGAGCACCACAA
57.085
52.632
16.95
0.00
45.16
3.33
3530
6931
2.591923
CATAGGAGGTGAGCTAGAGCA
58.408
52.381
4.01
0.00
45.16
4.26
3531
6932
1.272212
GCATAGGAGGTGAGCTAGAGC
59.728
57.143
0.00
0.00
42.49
4.09
3534
6935
2.034878
TGTGCATAGGAGGTGAGCTAG
58.965
52.381
0.00
0.00
0.00
3.42
3535
6936
2.159179
TGTGCATAGGAGGTGAGCTA
57.841
50.000
0.00
0.00
0.00
3.32
3536
6937
1.140452
CATGTGCATAGGAGGTGAGCT
59.860
52.381
0.00
0.00
0.00
4.09
3537
6938
1.139654
TCATGTGCATAGGAGGTGAGC
59.860
52.381
0.00
0.00
0.00
4.26
3539
6940
1.764723
CCTCATGTGCATAGGAGGTGA
59.235
52.381
29.58
9.38
41.58
4.02
3552
7109
3.127548
GCATTTCATCGAACACCTCATGT
59.872
43.478
0.00
0.00
46.42
3.21
3555
7112
2.083774
GGCATTTCATCGAACACCTCA
58.916
47.619
0.00
0.00
0.00
3.86
3556
7113
1.401905
GGGCATTTCATCGAACACCTC
59.598
52.381
0.00
0.00
0.00
3.85
3561
7118
0.028110
GCTCGGGCATTTCATCGAAC
59.972
55.000
0.00
0.00
38.54
3.95
3563
7120
1.523711
GGCTCGGGCATTTCATCGA
60.524
57.895
10.74
0.00
40.87
3.59
3564
7121
1.819208
TGGCTCGGGCATTTCATCG
60.819
57.895
10.74
0.00
40.87
3.84
3565
7122
1.031571
TGTGGCTCGGGCATTTCATC
61.032
55.000
10.74
0.00
40.92
2.92
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.