Multiple sequence alignment - TraesCS7D01G543300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G543300 chr7D 100.000 5753 0 0 1 5753 631857152 631851400 0.000000e+00 10624.0
1 TraesCS7D01G543300 chr7D 83.463 387 45 12 5383 5753 519683944 519684327 5.520000e-90 342.0
2 TraesCS7D01G543300 chr7D 84.615 351 41 8 4438 4776 519683031 519683380 2.570000e-88 337.0
3 TraesCS7D01G543300 chr7B 91.868 2939 137 32 965 3852 743418079 743415192 0.000000e+00 4010.0
4 TraesCS7D01G543300 chr7B 90.701 785 53 9 4002 4775 743415171 743414396 0.000000e+00 1027.0
5 TraesCS7D01G543300 chr7B 86.548 840 48 27 4898 5717 743414233 743413439 0.000000e+00 865.0
6 TraesCS7D01G543300 chr7B 84.097 371 43 10 5398 5753 641154920 641154551 1.530000e-90 344.0
7 TraesCS7D01G543300 chr7B 82.692 364 35 5 4440 4776 641155858 641155496 1.210000e-76 298.0
8 TraesCS7D01G543300 chr7B 100.000 55 0 0 4743 4797 743414399 743414345 1.020000e-17 102.0
9 TraesCS7D01G543300 chr7A 93.865 2559 95 15 1332 3858 736517362 736519890 0.000000e+00 3799.0
10 TraesCS7D01G543300 chr7A 79.983 1144 149 51 4658 5753 736520692 736521803 0.000000e+00 771.0
11 TraesCS7D01G543300 chr7A 92.336 535 24 6 4019 4543 736520085 736520612 0.000000e+00 745.0
12 TraesCS7D01G543300 chr7A 85.196 358 19 13 689 1037 736516514 736516846 2.570000e-88 337.0
13 TraesCS7D01G543300 chr7A 87.975 158 6 5 213 357 736516251 736516408 2.130000e-39 174.0
14 TraesCS7D01G543300 chr7A 83.453 139 11 10 1023 1161 736516897 736517023 1.010000e-22 119.0
15 TraesCS7D01G543300 chr3B 82.152 1524 159 56 3314 4797 763516622 763515172 0.000000e+00 1203.0
16 TraesCS7D01G543300 chr3B 81.400 1086 150 29 1732 2802 763519542 763518494 0.000000e+00 839.0
17 TraesCS7D01G543300 chr3B 86.873 518 64 4 2805 3321 763517321 763516807 1.390000e-160 577.0
18 TraesCS7D01G543300 chr3B 84.097 371 43 9 5398 5753 17494504 17494873 1.530000e-90 344.0
19 TraesCS7D01G543300 chr3B 83.702 362 35 5 4438 4776 17493610 17493970 2.590000e-83 320.0
20 TraesCS7D01G543300 chrUn 82.143 1288 145 42 3384 4650 305950660 305951883 0.000000e+00 1026.0
21 TraesCS7D01G543300 chrUn 86.014 143 9 5 4661 4803 467146160 467146291 6.010000e-30 143.0
22 TraesCS7D01G543300 chr2D 85.886 333 40 6 5285 5612 37137898 37138228 1.190000e-91 348.0
23 TraesCS7D01G543300 chr2D 84.097 371 43 10 5398 5753 598967644 598968013 1.530000e-90 344.0
24 TraesCS7D01G543300 chr4A 90.114 263 24 2 5277 5539 13253879 13254139 1.990000e-89 340.0
25 TraesCS7D01G543300 chr6A 83.871 372 42 12 5398 5753 445282640 445283009 7.140000e-89 339.0
26 TraesCS7D01G543300 chr6A 83.106 367 27 12 4438 4776 445281686 445282045 9.370000e-78 302.0
27 TraesCS7D01G543300 chr6B 84.729 203 25 5 5538 5735 70462970 70463171 1.260000e-46 198.0
28 TraesCS7D01G543300 chr4B 84.236 203 26 5 5538 5735 380102219 380102018 5.880000e-45 193.0
29 TraesCS7D01G543300 chr1D 90.741 54 1 2 243 292 452622795 452622848 1.030000e-07 69.4
30 TraesCS7D01G543300 chr1D 100.000 35 0 0 241 275 19254254 19254220 1.340000e-06 65.8
31 TraesCS7D01G543300 chr1B 93.478 46 1 1 243 288 408619212 408619255 3.720000e-07 67.6
32 TraesCS7D01G543300 chr1B 91.111 45 3 1 241 285 646055239 646055196 6.230000e-05 60.2
33 TraesCS7D01G543300 chr3D 100.000 35 0 0 241 275 574112891 574112925 1.340000e-06 65.8
34 TraesCS7D01G543300 chr3D 94.872 39 1 1 242 280 589151738 589151775 6.230000e-05 60.2
35 TraesCS7D01G543300 chr4D 100.000 34 0 0 242 275 44050440 44050473 4.810000e-06 63.9
36 TraesCS7D01G543300 chr3A 97.297 37 1 0 239 275 587969409 587969373 4.810000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G543300 chr7D 631851400 631857152 5752 True 10624.000000 10624 100.000000 1 5753 1 chr7D.!!$R1 5752
1 TraesCS7D01G543300 chr7D 519683031 519684327 1296 False 339.500000 342 84.039000 4438 5753 2 chr7D.!!$F1 1315
2 TraesCS7D01G543300 chr7B 743413439 743418079 4640 True 1501.000000 4010 92.279250 965 5717 4 chr7B.!!$R2 4752
3 TraesCS7D01G543300 chr7B 641154551 641155858 1307 True 321.000000 344 83.394500 4440 5753 2 chr7B.!!$R1 1313
4 TraesCS7D01G543300 chr7A 736516251 736521803 5552 False 990.833333 3799 87.134667 213 5753 6 chr7A.!!$F1 5540
5 TraesCS7D01G543300 chr3B 763515172 763519542 4370 True 873.000000 1203 83.475000 1732 4797 3 chr3B.!!$R1 3065
6 TraesCS7D01G543300 chr3B 17493610 17494873 1263 False 332.000000 344 83.899500 4438 5753 2 chr3B.!!$F1 1315
7 TraesCS7D01G543300 chrUn 305950660 305951883 1223 False 1026.000000 1026 82.143000 3384 4650 1 chrUn.!!$F1 1266
8 TraesCS7D01G543300 chr6A 445281686 445283009 1323 False 320.500000 339 83.488500 4438 5753 2 chr6A.!!$F1 1315

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
660 674 0.029035 CATGCGGCTGCTGAATCTTC 59.971 55.000 20.27 0.0 43.34 2.87 F
846 861 0.037697 AGCACGTATGAAGCCGACAA 60.038 50.000 0.00 0.0 0.00 3.18 F
1040 1064 0.109597 CAGCAAACAACCAGATCGCC 60.110 55.000 0.00 0.0 0.00 5.54 F
1941 2223 0.246360 TCATTGACGACGATGCCAGT 59.754 50.000 9.88 0.0 37.70 4.00 F
3186 4644 0.249031 GGACCAAATATGCAAGGCGC 60.249 55.000 0.00 0.0 42.89 6.53 F
4064 5847 1.635487 TGTGCCAGGCCTAAGAATCTT 59.365 47.619 3.98 0.0 0.00 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2578 2865 0.985549 CGAAGCTCGTACTTGCTGAC 59.014 55.000 9.66 7.09 39.71 3.51 R
2611 2898 2.064762 CTTCTCGAACAACCTCTGCAG 58.935 52.381 7.63 7.63 0.00 4.41 R
2968 4425 1.248785 ACATACTCACGACACGGGCT 61.249 55.000 0.00 0.00 0.00 5.19 R
3481 5146 0.244721 GCCCTGCTTGAAATGTCCAC 59.755 55.000 0.00 0.00 0.00 4.02 R
4340 6149 0.618458 TAGTTGAGTGTCCCCATGGC 59.382 55.000 6.09 0.00 0.00 4.40 R
5245 7298 0.103208 CCCAGCGCTACCAAGTAGAG 59.897 60.000 10.99 3.70 38.29 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 2.080654 TTTTTCTGAACAGGGGTGGG 57.919 50.000 1.93 0.00 0.00 4.61
61 62 1.227249 TTTTCTGAACAGGGGTGGGA 58.773 50.000 1.93 0.00 0.00 4.37
62 63 1.227249 TTTCTGAACAGGGGTGGGAA 58.773 50.000 1.93 0.00 0.00 3.97
63 64 1.227249 TTCTGAACAGGGGTGGGAAA 58.773 50.000 1.93 0.00 0.00 3.13
64 65 1.455822 TCTGAACAGGGGTGGGAAAT 58.544 50.000 1.93 0.00 0.00 2.17
65 66 1.786441 TCTGAACAGGGGTGGGAAATT 59.214 47.619 1.93 0.00 0.00 1.82
66 67 2.178984 TCTGAACAGGGGTGGGAAATTT 59.821 45.455 1.93 0.00 0.00 1.82
67 68 3.399644 TCTGAACAGGGGTGGGAAATTTA 59.600 43.478 1.93 0.00 0.00 1.40
68 69 4.140900 TCTGAACAGGGGTGGGAAATTTAA 60.141 41.667 1.93 0.00 0.00 1.52
69 70 4.557705 TGAACAGGGGTGGGAAATTTAAA 58.442 39.130 0.00 0.00 0.00 1.52
70 71 4.969359 TGAACAGGGGTGGGAAATTTAAAA 59.031 37.500 0.00 0.00 0.00 1.52
71 72 5.428783 TGAACAGGGGTGGGAAATTTAAAAA 59.571 36.000 0.00 0.00 0.00 1.94
91 92 3.625649 AAAACAAAATGGTGTGGCAGT 57.374 38.095 0.00 0.00 0.00 4.40
92 93 4.744795 AAAACAAAATGGTGTGGCAGTA 57.255 36.364 0.00 0.00 0.00 2.74
93 94 4.744795 AAACAAAATGGTGTGGCAGTAA 57.255 36.364 0.00 0.00 0.00 2.24
94 95 4.744795 AACAAAATGGTGTGGCAGTAAA 57.255 36.364 0.00 0.00 0.00 2.01
95 96 4.953940 ACAAAATGGTGTGGCAGTAAAT 57.046 36.364 0.00 0.00 0.00 1.40
96 97 4.881920 ACAAAATGGTGTGGCAGTAAATC 58.118 39.130 0.00 0.00 0.00 2.17
97 98 4.588528 ACAAAATGGTGTGGCAGTAAATCT 59.411 37.500 0.00 0.00 0.00 2.40
98 99 5.163513 CAAAATGGTGTGGCAGTAAATCTC 58.836 41.667 0.00 0.00 0.00 2.75
99 100 3.719268 ATGGTGTGGCAGTAAATCTCA 57.281 42.857 0.00 0.00 0.00 3.27
100 101 2.778299 TGGTGTGGCAGTAAATCTCAC 58.222 47.619 0.00 0.00 0.00 3.51
101 102 2.105649 TGGTGTGGCAGTAAATCTCACA 59.894 45.455 0.00 0.00 36.20 3.58
102 103 3.146066 GGTGTGGCAGTAAATCTCACAA 58.854 45.455 0.00 0.00 39.58 3.33
103 104 3.568007 GGTGTGGCAGTAAATCTCACAAA 59.432 43.478 0.00 0.00 39.58 2.83
104 105 4.537015 GTGTGGCAGTAAATCTCACAAAC 58.463 43.478 0.00 0.00 39.58 2.93
105 106 4.036262 GTGTGGCAGTAAATCTCACAAACA 59.964 41.667 0.00 0.00 39.58 2.83
106 107 4.642437 TGTGGCAGTAAATCTCACAAACAA 59.358 37.500 0.00 0.00 35.72 2.83
107 108 5.126222 TGTGGCAGTAAATCTCACAAACAAA 59.874 36.000 0.00 0.00 35.72 2.83
108 109 6.039616 GTGGCAGTAAATCTCACAAACAAAA 58.960 36.000 0.00 0.00 0.00 2.44
109 110 6.533367 GTGGCAGTAAATCTCACAAACAAAAA 59.467 34.615 0.00 0.00 0.00 1.94
139 140 9.665719 ATGAAATAAAGAAACAACACAAAGGTT 57.334 25.926 0.00 0.00 0.00 3.50
140 141 9.495572 TGAAATAAAGAAACAACACAAAGGTTT 57.504 25.926 0.00 0.00 37.44 3.27
141 142 9.967245 GAAATAAAGAAACAACACAAAGGTTTC 57.033 29.630 8.08 8.08 46.60 2.78
151 152 8.487313 ACAACACAAAGGTTTCTAAAAATTCC 57.513 30.769 0.00 0.00 0.00 3.01
152 153 8.097662 ACAACACAAAGGTTTCTAAAAATTCCA 58.902 29.630 0.00 0.00 0.00 3.53
153 154 8.940952 CAACACAAAGGTTTCTAAAAATTCCAA 58.059 29.630 0.00 0.00 0.00 3.53
154 155 9.508642 AACACAAAGGTTTCTAAAAATTCCAAA 57.491 25.926 0.00 0.00 0.00 3.28
155 156 9.161629 ACACAAAGGTTTCTAAAAATTCCAAAG 57.838 29.630 0.00 0.00 0.00 2.77
156 157 9.377312 CACAAAGGTTTCTAAAAATTCCAAAGA 57.623 29.630 0.00 0.00 0.00 2.52
157 158 9.599866 ACAAAGGTTTCTAAAAATTCCAAAGAG 57.400 29.630 0.00 0.00 0.00 2.85
158 159 9.045223 CAAAGGTTTCTAAAAATTCCAAAGAGG 57.955 33.333 0.00 0.00 39.47 3.69
159 160 7.914427 AGGTTTCTAAAAATTCCAAAGAGGT 57.086 32.000 0.00 0.00 39.02 3.85
160 161 7.952671 AGGTTTCTAAAAATTCCAAAGAGGTC 58.047 34.615 0.00 0.00 39.02 3.85
161 162 7.015292 AGGTTTCTAAAAATTCCAAAGAGGTCC 59.985 37.037 0.00 0.00 39.02 4.46
162 163 6.569179 TTCTAAAAATTCCAAAGAGGTCCG 57.431 37.500 0.00 0.00 39.02 4.79
163 164 3.660501 AAAAATTCCAAAGAGGTCCGC 57.339 42.857 0.00 0.00 39.02 5.54
164 165 2.286365 AAATTCCAAAGAGGTCCGCA 57.714 45.000 0.00 0.00 39.02 5.69
165 166 2.286365 AATTCCAAAGAGGTCCGCAA 57.714 45.000 0.00 0.00 39.02 4.85
166 167 2.514458 ATTCCAAAGAGGTCCGCAAT 57.486 45.000 0.00 0.00 39.02 3.56
167 168 2.286365 TTCCAAAGAGGTCCGCAATT 57.714 45.000 0.00 0.00 39.02 2.32
168 169 1.533625 TCCAAAGAGGTCCGCAATTG 58.466 50.000 0.00 0.00 39.02 2.32
169 170 1.073125 TCCAAAGAGGTCCGCAATTGA 59.927 47.619 10.34 0.00 39.02 2.57
170 171 1.470098 CCAAAGAGGTCCGCAATTGAG 59.530 52.381 10.34 5.80 0.00 3.02
171 172 2.426522 CAAAGAGGTCCGCAATTGAGA 58.573 47.619 10.34 1.70 0.00 3.27
172 173 2.813754 CAAAGAGGTCCGCAATTGAGAA 59.186 45.455 10.34 0.00 0.00 2.87
173 174 2.859165 AGAGGTCCGCAATTGAGAAA 57.141 45.000 10.34 0.00 0.00 2.52
174 175 3.140325 AGAGGTCCGCAATTGAGAAAA 57.860 42.857 10.34 0.00 0.00 2.29
175 176 3.486383 AGAGGTCCGCAATTGAGAAAAA 58.514 40.909 10.34 0.00 0.00 1.94
176 177 4.082125 AGAGGTCCGCAATTGAGAAAAAT 58.918 39.130 10.34 0.00 0.00 1.82
177 178 5.253330 AGAGGTCCGCAATTGAGAAAAATA 58.747 37.500 10.34 0.00 0.00 1.40
178 179 5.710099 AGAGGTCCGCAATTGAGAAAAATAA 59.290 36.000 10.34 0.00 0.00 1.40
179 180 6.208599 AGAGGTCCGCAATTGAGAAAAATAAA 59.791 34.615 10.34 0.00 0.00 1.40
180 181 6.754193 AGGTCCGCAATTGAGAAAAATAAAA 58.246 32.000 10.34 0.00 0.00 1.52
181 182 6.868339 AGGTCCGCAATTGAGAAAAATAAAAG 59.132 34.615 10.34 0.00 0.00 2.27
182 183 6.401047 GGTCCGCAATTGAGAAAAATAAAAGC 60.401 38.462 10.34 0.00 0.00 3.51
183 184 6.145371 GTCCGCAATTGAGAAAAATAAAAGCA 59.855 34.615 10.34 0.00 0.00 3.91
184 185 6.703607 TCCGCAATTGAGAAAAATAAAAGCAA 59.296 30.769 10.34 0.00 0.00 3.91
185 186 7.387397 TCCGCAATTGAGAAAAATAAAAGCAAT 59.613 29.630 10.34 0.00 0.00 3.56
186 187 8.016801 CCGCAATTGAGAAAAATAAAAGCAATT 58.983 29.630 10.34 0.00 35.56 2.32
192 193 9.705290 TTGAGAAAAATAAAAGCAATTAGGTCC 57.295 29.630 0.00 0.00 0.00 4.46
193 194 8.865090 TGAGAAAAATAAAAGCAATTAGGTCCA 58.135 29.630 0.00 0.00 0.00 4.02
194 195 9.705290 GAGAAAAATAAAAGCAATTAGGTCCAA 57.295 29.630 0.00 0.00 0.00 3.53
197 198 8.615878 AAAATAAAAGCAATTAGGTCCAAACC 57.384 30.769 0.00 0.00 46.87 3.27
205 206 2.654877 GGTCCAAACCGCTCTCGA 59.345 61.111 0.00 0.00 35.36 4.04
206 207 1.446272 GGTCCAAACCGCTCTCGAG 60.446 63.158 5.93 5.93 35.36 4.04
207 208 1.289380 GTCCAAACCGCTCTCGAGT 59.711 57.895 13.13 0.00 38.10 4.18
208 209 0.524862 GTCCAAACCGCTCTCGAGTA 59.475 55.000 13.13 0.00 38.10 2.59
209 210 0.809385 TCCAAACCGCTCTCGAGTAG 59.191 55.000 13.13 9.69 38.10 2.57
210 211 0.809385 CCAAACCGCTCTCGAGTAGA 59.191 55.000 13.13 0.00 38.10 2.59
211 212 1.201647 CCAAACCGCTCTCGAGTAGAA 59.798 52.381 13.13 0.00 38.10 2.10
217 218 3.056749 ACCGCTCTCGAGTAGAACAAATT 60.057 43.478 13.13 0.00 38.10 1.82
252 253 0.752376 GGTCCAGACTACTCCCTCCG 60.752 65.000 0.00 0.00 0.00 4.63
282 292 2.000429 TAAGAGCGTTTTAGGACGGC 58.000 50.000 0.00 0.00 42.98 5.68
290 304 0.532115 TTTTAGGACGGCGGGAGTAC 59.468 55.000 13.24 0.00 0.00 2.73
293 307 0.749454 TAGGACGGCGGGAGTACTTC 60.749 60.000 13.24 0.00 34.13 3.01
341 355 2.431260 CCGCAACAAGCCATGTGC 60.431 61.111 0.00 0.00 42.99 4.57
357 371 3.343941 TGTGCTCCACCCTATAACAAC 57.656 47.619 0.00 0.00 32.73 3.32
359 373 3.265737 TGTGCTCCACCCTATAACAACAT 59.734 43.478 0.00 0.00 32.73 2.71
360 374 4.263727 TGTGCTCCACCCTATAACAACATT 60.264 41.667 0.00 0.00 32.73 2.71
362 376 6.062095 GTGCTCCACCCTATAACAACATTAT 58.938 40.000 0.00 0.00 0.00 1.28
363 377 6.017109 GTGCTCCACCCTATAACAACATTATG 60.017 42.308 0.00 0.00 0.00 1.90
364 378 5.473504 GCTCCACCCTATAACAACATTATGG 59.526 44.000 0.00 0.00 0.00 2.74
365 379 5.381757 TCCACCCTATAACAACATTATGGC 58.618 41.667 0.00 0.00 0.00 4.40
366 380 4.522789 CCACCCTATAACAACATTATGGCC 59.477 45.833 0.00 0.00 0.00 5.36
369 383 5.103258 ACCCTATAACAACATTATGGCCCTT 60.103 40.000 0.00 0.00 0.00 3.95
372 386 3.979101 AACAACATTATGGCCCTTTGG 57.021 42.857 0.00 0.00 0.00 3.28
385 399 2.301346 CCCTTTGGCACTGATATGACC 58.699 52.381 0.00 0.00 0.00 4.02
386 400 1.942657 CCTTTGGCACTGATATGACCG 59.057 52.381 0.00 0.00 0.00 4.79
387 401 1.942657 CTTTGGCACTGATATGACCGG 59.057 52.381 0.00 0.00 0.00 5.28
388 402 1.199615 TTGGCACTGATATGACCGGA 58.800 50.000 9.46 0.00 0.00 5.14
389 403 1.199615 TGGCACTGATATGACCGGAA 58.800 50.000 9.46 0.00 0.00 4.30
390 404 1.138859 TGGCACTGATATGACCGGAAG 59.861 52.381 9.46 0.00 0.00 3.46
405 419 2.442413 CGGAAGGAATAAACTTGGCCA 58.558 47.619 0.00 0.00 0.00 5.36
406 420 2.163613 CGGAAGGAATAAACTTGGCCAC 59.836 50.000 3.88 0.00 0.00 5.01
407 421 2.496070 GGAAGGAATAAACTTGGCCACC 59.504 50.000 3.88 0.00 0.00 4.61
408 422 3.431415 GAAGGAATAAACTTGGCCACCT 58.569 45.455 3.88 2.39 0.00 4.00
411 425 4.231273 AGGAATAAACTTGGCCACCTTTT 58.769 39.130 3.88 7.84 0.00 2.27
415 429 2.159179 AACTTGGCCACCTTTTGACT 57.841 45.000 3.88 0.00 0.00 3.41
416 430 3.306472 AACTTGGCCACCTTTTGACTA 57.694 42.857 3.88 0.00 0.00 2.59
418 432 2.441750 ACTTGGCCACCTTTTGACTAGA 59.558 45.455 3.88 0.00 0.00 2.43
420 434 3.140325 TGGCCACCTTTTGACTAGAAG 57.860 47.619 0.00 0.00 0.00 2.85
421 435 2.224769 TGGCCACCTTTTGACTAGAAGG 60.225 50.000 0.00 1.06 46.27 3.46
422 436 2.039879 GGCCACCTTTTGACTAGAAGGA 59.960 50.000 13.45 0.00 44.15 3.36
423 437 3.497942 GGCCACCTTTTGACTAGAAGGAA 60.498 47.826 13.45 0.00 44.15 3.36
424 438 4.336280 GCCACCTTTTGACTAGAAGGAAT 58.664 43.478 13.45 0.00 44.15 3.01
425 439 4.156739 GCCACCTTTTGACTAGAAGGAATG 59.843 45.833 13.45 4.02 44.15 2.67
426 440 5.560724 CCACCTTTTGACTAGAAGGAATGA 58.439 41.667 13.45 0.00 44.15 2.57
427 441 5.412904 CCACCTTTTGACTAGAAGGAATGAC 59.587 44.000 13.45 0.00 44.15 3.06
428 442 5.120830 CACCTTTTGACTAGAAGGAATGACG 59.879 44.000 13.45 0.00 44.15 4.35
429 443 4.631813 CCTTTTGACTAGAAGGAATGACGG 59.368 45.833 0.00 0.00 44.15 4.79
431 445 2.457598 TGACTAGAAGGAATGACGGCT 58.542 47.619 0.00 0.00 0.00 5.52
432 446 2.427453 TGACTAGAAGGAATGACGGCTC 59.573 50.000 0.00 0.00 0.00 4.70
433 447 2.427453 GACTAGAAGGAATGACGGCTCA 59.573 50.000 0.00 0.00 0.00 4.26
434 448 3.034635 ACTAGAAGGAATGACGGCTCAT 58.965 45.455 0.00 0.00 38.94 2.90
435 449 2.611225 AGAAGGAATGACGGCTCATC 57.389 50.000 0.00 0.00 35.96 2.92
436 450 1.202463 AGAAGGAATGACGGCTCATCG 60.202 52.381 0.00 0.00 35.96 3.84
437 451 0.179073 AAGGAATGACGGCTCATCGG 60.179 55.000 0.00 0.00 35.96 4.18
439 453 0.598680 GGAATGACGGCTCATCGGAG 60.599 60.000 0.00 0.00 44.33 4.63
442 456 0.387202 ATGACGGCTCATCGGAGAAG 59.613 55.000 0.00 0.00 44.26 2.85
443 457 1.066587 GACGGCTCATCGGAGAAGG 59.933 63.158 0.00 0.00 44.26 3.46
444 458 2.279784 CGGCTCATCGGAGAAGGC 60.280 66.667 6.06 6.06 44.26 4.35
445 459 2.110006 GGCTCATCGGAGAAGGCC 59.890 66.667 0.00 0.00 44.26 5.19
454 468 2.283824 GGAGAAGGCCGACAACCTA 58.716 57.895 0.00 0.00 36.14 3.08
456 470 1.202545 GGAGAAGGCCGACAACCTATC 60.203 57.143 0.00 0.00 36.14 2.08
457 471 1.480954 GAGAAGGCCGACAACCTATCA 59.519 52.381 0.00 0.00 36.14 2.15
458 472 1.482593 AGAAGGCCGACAACCTATCAG 59.517 52.381 0.00 0.00 36.14 2.90
459 473 1.207329 GAAGGCCGACAACCTATCAGT 59.793 52.381 0.00 0.00 36.14 3.41
461 475 1.755380 AGGCCGACAACCTATCAGTAC 59.245 52.381 0.00 0.00 35.10 2.73
462 476 1.202498 GGCCGACAACCTATCAGTACC 60.202 57.143 0.00 0.00 0.00 3.34
463 477 1.535437 GCCGACAACCTATCAGTACCG 60.535 57.143 0.00 0.00 0.00 4.02
464 478 1.747355 CCGACAACCTATCAGTACCGT 59.253 52.381 0.00 0.00 0.00 4.83
465 479 2.945008 CCGACAACCTATCAGTACCGTA 59.055 50.000 0.00 0.00 0.00 4.02
466 480 3.003068 CCGACAACCTATCAGTACCGTAG 59.997 52.174 0.00 0.00 0.00 3.51
467 481 3.547613 CGACAACCTATCAGTACCGTAGC 60.548 52.174 0.00 0.00 0.00 3.58
468 482 2.692041 ACAACCTATCAGTACCGTAGCC 59.308 50.000 0.00 0.00 0.00 3.93
469 483 1.992538 ACCTATCAGTACCGTAGCCC 58.007 55.000 0.00 0.00 0.00 5.19
470 484 1.498145 ACCTATCAGTACCGTAGCCCT 59.502 52.381 0.00 0.00 0.00 5.19
471 485 2.091444 ACCTATCAGTACCGTAGCCCTT 60.091 50.000 0.00 0.00 0.00 3.95
472 486 2.557490 CCTATCAGTACCGTAGCCCTTC 59.443 54.545 0.00 0.00 0.00 3.46
473 487 1.411041 ATCAGTACCGTAGCCCTTCC 58.589 55.000 0.00 0.00 0.00 3.46
474 488 0.040058 TCAGTACCGTAGCCCTTCCA 59.960 55.000 0.00 0.00 0.00 3.53
475 489 0.899720 CAGTACCGTAGCCCTTCCAA 59.100 55.000 0.00 0.00 0.00 3.53
476 490 1.276989 CAGTACCGTAGCCCTTCCAAA 59.723 52.381 0.00 0.00 0.00 3.28
477 491 2.093128 CAGTACCGTAGCCCTTCCAAAT 60.093 50.000 0.00 0.00 0.00 2.32
478 492 3.133362 CAGTACCGTAGCCCTTCCAAATA 59.867 47.826 0.00 0.00 0.00 1.40
479 493 2.704464 ACCGTAGCCCTTCCAAATAC 57.296 50.000 0.00 0.00 0.00 1.89
480 494 1.211212 ACCGTAGCCCTTCCAAATACC 59.789 52.381 0.00 0.00 0.00 2.73
481 495 1.476291 CCGTAGCCCTTCCAAATACCC 60.476 57.143 0.00 0.00 0.00 3.69
482 496 1.476291 CGTAGCCCTTCCAAATACCCC 60.476 57.143 0.00 0.00 0.00 4.95
483 497 1.567175 GTAGCCCTTCCAAATACCCCA 59.433 52.381 0.00 0.00 0.00 4.96
484 498 0.335019 AGCCCTTCCAAATACCCCAC 59.665 55.000 0.00 0.00 0.00 4.61
485 499 0.686441 GCCCTTCCAAATACCCCACC 60.686 60.000 0.00 0.00 0.00 4.61
486 500 0.395173 CCCTTCCAAATACCCCACCG 60.395 60.000 0.00 0.00 0.00 4.94
487 501 0.621609 CCTTCCAAATACCCCACCGA 59.378 55.000 0.00 0.00 0.00 4.69
488 502 1.214424 CCTTCCAAATACCCCACCGAT 59.786 52.381 0.00 0.00 0.00 4.18
489 503 2.297701 CTTCCAAATACCCCACCGATG 58.702 52.381 0.00 0.00 0.00 3.84
490 504 1.585895 TCCAAATACCCCACCGATGA 58.414 50.000 0.00 0.00 0.00 2.92
491 505 1.916874 TCCAAATACCCCACCGATGAA 59.083 47.619 0.00 0.00 0.00 2.57
492 506 2.092646 TCCAAATACCCCACCGATGAAG 60.093 50.000 0.00 0.00 0.00 3.02
493 507 1.676006 CAAATACCCCACCGATGAAGC 59.324 52.381 0.00 0.00 0.00 3.86
494 508 1.213296 AATACCCCACCGATGAAGCT 58.787 50.000 0.00 0.00 0.00 3.74
495 509 1.213296 ATACCCCACCGATGAAGCTT 58.787 50.000 0.00 0.00 0.00 3.74
496 510 1.868713 TACCCCACCGATGAAGCTTA 58.131 50.000 0.00 0.00 0.00 3.09
497 511 0.541863 ACCCCACCGATGAAGCTTAG 59.458 55.000 0.00 0.00 0.00 2.18
498 512 0.179045 CCCCACCGATGAAGCTTAGG 60.179 60.000 0.00 3.47 0.00 2.69
499 513 0.830648 CCCACCGATGAAGCTTAGGA 59.169 55.000 14.27 0.00 0.00 2.94
500 514 1.473434 CCCACCGATGAAGCTTAGGAC 60.473 57.143 14.27 0.00 0.00 3.85
501 515 1.473434 CCACCGATGAAGCTTAGGACC 60.473 57.143 14.27 0.00 0.00 4.46
502 516 0.831307 ACCGATGAAGCTTAGGACCC 59.169 55.000 14.27 0.00 0.00 4.46
503 517 1.123928 CCGATGAAGCTTAGGACCCT 58.876 55.000 0.00 0.00 0.00 4.34
504 518 1.069358 CCGATGAAGCTTAGGACCCTC 59.931 57.143 0.00 0.00 0.00 4.30
505 519 1.269309 CGATGAAGCTTAGGACCCTCG 60.269 57.143 0.00 0.00 0.00 4.63
506 520 0.466124 ATGAAGCTTAGGACCCTCGC 59.534 55.000 0.00 0.00 0.00 5.03
507 521 0.614979 TGAAGCTTAGGACCCTCGCT 60.615 55.000 0.00 6.88 35.44 4.93
508 522 0.179097 GAAGCTTAGGACCCTCGCTG 60.179 60.000 0.00 0.00 34.62 5.18
509 523 2.202946 GCTTAGGACCCTCGCTGC 60.203 66.667 0.00 0.00 0.00 5.25
510 524 3.019003 GCTTAGGACCCTCGCTGCA 62.019 63.158 0.00 0.00 0.00 4.41
511 525 1.826024 CTTAGGACCCTCGCTGCAT 59.174 57.895 0.00 0.00 0.00 3.96
512 526 0.249657 CTTAGGACCCTCGCTGCATC 60.250 60.000 0.00 0.00 0.00 3.91
513 527 0.975556 TTAGGACCCTCGCTGCATCA 60.976 55.000 0.00 0.00 0.00 3.07
514 528 0.760567 TAGGACCCTCGCTGCATCAT 60.761 55.000 0.00 0.00 0.00 2.45
515 529 1.596477 GGACCCTCGCTGCATCATC 60.596 63.158 0.00 0.00 0.00 2.92
516 530 1.445095 GACCCTCGCTGCATCATCT 59.555 57.895 0.00 0.00 0.00 2.90
517 531 0.599728 GACCCTCGCTGCATCATCTC 60.600 60.000 0.00 0.00 0.00 2.75
518 532 1.301558 CCCTCGCTGCATCATCTCC 60.302 63.158 0.00 0.00 0.00 3.71
519 533 1.747145 CCTCGCTGCATCATCTCCT 59.253 57.895 0.00 0.00 0.00 3.69
520 534 0.964700 CCTCGCTGCATCATCTCCTA 59.035 55.000 0.00 0.00 0.00 2.94
521 535 1.067706 CCTCGCTGCATCATCTCCTAG 60.068 57.143 0.00 0.00 0.00 3.02
522 536 1.612950 CTCGCTGCATCATCTCCTAGT 59.387 52.381 0.00 0.00 0.00 2.57
523 537 2.034878 TCGCTGCATCATCTCCTAGTT 58.965 47.619 0.00 0.00 0.00 2.24
524 538 2.432146 TCGCTGCATCATCTCCTAGTTT 59.568 45.455 0.00 0.00 0.00 2.66
525 539 3.118629 TCGCTGCATCATCTCCTAGTTTT 60.119 43.478 0.00 0.00 0.00 2.43
526 540 3.002042 CGCTGCATCATCTCCTAGTTTTG 59.998 47.826 0.00 0.00 0.00 2.44
527 541 3.314635 GCTGCATCATCTCCTAGTTTTGG 59.685 47.826 0.00 0.00 0.00 3.28
528 542 3.282021 TGCATCATCTCCTAGTTTTGGC 58.718 45.455 0.00 0.00 0.00 4.52
529 543 3.054139 TGCATCATCTCCTAGTTTTGGCT 60.054 43.478 0.00 0.00 0.00 4.75
530 544 3.314635 GCATCATCTCCTAGTTTTGGCTG 59.685 47.826 0.00 0.00 0.00 4.85
531 545 3.634397 TCATCTCCTAGTTTTGGCTGG 57.366 47.619 0.00 0.00 0.00 4.85
532 546 2.019984 CATCTCCTAGTTTTGGCTGGC 58.980 52.381 0.00 0.00 0.00 4.85
533 547 1.064003 TCTCCTAGTTTTGGCTGGCA 58.936 50.000 0.00 0.00 0.00 4.92
534 548 1.635487 TCTCCTAGTTTTGGCTGGCAT 59.365 47.619 4.22 0.00 0.00 4.40
535 549 2.843730 TCTCCTAGTTTTGGCTGGCATA 59.156 45.455 4.22 0.00 0.00 3.14
536 550 3.265737 TCTCCTAGTTTTGGCTGGCATAA 59.734 43.478 4.22 3.59 0.00 1.90
537 551 3.352648 TCCTAGTTTTGGCTGGCATAAC 58.647 45.455 23.28 23.28 0.00 1.89
538 552 3.088532 CCTAGTTTTGGCTGGCATAACA 58.911 45.455 28.94 18.22 0.00 2.41
539 553 3.119495 CCTAGTTTTGGCTGGCATAACAC 60.119 47.826 28.94 14.36 0.00 3.32
540 554 2.315176 AGTTTTGGCTGGCATAACACA 58.685 42.857 28.94 3.91 0.00 3.72
541 555 2.899256 AGTTTTGGCTGGCATAACACAT 59.101 40.909 28.94 13.49 0.00 3.21
542 556 2.995258 GTTTTGGCTGGCATAACACATG 59.005 45.455 24.90 0.00 0.00 3.21
543 557 1.921982 TTGGCTGGCATAACACATGT 58.078 45.000 4.22 0.00 0.00 3.21
544 558 2.797177 TGGCTGGCATAACACATGTA 57.203 45.000 0.00 0.00 0.00 2.29
545 559 3.295585 TGGCTGGCATAACACATGTAT 57.704 42.857 0.00 0.00 0.00 2.29
546 560 4.429854 TGGCTGGCATAACACATGTATA 57.570 40.909 0.00 0.00 0.00 1.47
547 561 4.133820 TGGCTGGCATAACACATGTATAC 58.866 43.478 0.00 0.00 0.00 1.47
548 562 3.502211 GGCTGGCATAACACATGTATACC 59.498 47.826 0.00 0.00 0.00 2.73
549 563 3.186409 GCTGGCATAACACATGTATACCG 59.814 47.826 0.00 0.00 0.00 4.02
550 564 3.135225 TGGCATAACACATGTATACCGC 58.865 45.455 0.00 0.00 0.00 5.68
551 565 3.135225 GGCATAACACATGTATACCGCA 58.865 45.455 0.00 0.00 0.00 5.69
552 566 3.186409 GGCATAACACATGTATACCGCAG 59.814 47.826 0.00 0.00 0.00 5.18
553 567 3.363970 GCATAACACATGTATACCGCAGC 60.364 47.826 0.00 0.00 0.00 5.25
554 568 2.394930 AACACATGTATACCGCAGCA 57.605 45.000 0.00 0.00 0.00 4.41
555 569 2.394930 ACACATGTATACCGCAGCAA 57.605 45.000 0.00 0.00 0.00 3.91
556 570 2.705730 ACACATGTATACCGCAGCAAA 58.294 42.857 0.00 0.00 0.00 3.68
557 571 3.078097 ACACATGTATACCGCAGCAAAA 58.922 40.909 0.00 0.00 0.00 2.44
558 572 3.126858 ACACATGTATACCGCAGCAAAAG 59.873 43.478 0.00 0.00 0.00 2.27
559 573 3.373748 CACATGTATACCGCAGCAAAAGA 59.626 43.478 0.00 0.00 0.00 2.52
560 574 3.374058 ACATGTATACCGCAGCAAAAGAC 59.626 43.478 0.00 0.00 0.00 3.01
561 575 1.996898 TGTATACCGCAGCAAAAGACG 59.003 47.619 0.00 0.00 0.00 4.18
562 576 2.264813 GTATACCGCAGCAAAAGACGA 58.735 47.619 0.00 0.00 0.00 4.20
563 577 1.359848 ATACCGCAGCAAAAGACGAG 58.640 50.000 0.00 0.00 0.00 4.18
564 578 0.669318 TACCGCAGCAAAAGACGAGG 60.669 55.000 0.00 0.00 0.00 4.63
565 579 1.667830 CCGCAGCAAAAGACGAGGA 60.668 57.895 0.00 0.00 0.00 3.71
566 580 1.021390 CCGCAGCAAAAGACGAGGAT 61.021 55.000 0.00 0.00 0.00 3.24
567 581 0.371645 CGCAGCAAAAGACGAGGATC 59.628 55.000 0.00 0.00 0.00 3.36
568 582 1.442769 GCAGCAAAAGACGAGGATCA 58.557 50.000 0.00 0.00 33.17 2.92
569 583 1.129437 GCAGCAAAAGACGAGGATCAC 59.871 52.381 0.00 0.00 33.17 3.06
570 584 2.693069 CAGCAAAAGACGAGGATCACT 58.307 47.619 0.00 0.00 33.17 3.41
571 585 3.070018 CAGCAAAAGACGAGGATCACTT 58.930 45.455 0.00 0.00 33.93 3.16
572 586 3.499918 CAGCAAAAGACGAGGATCACTTT 59.500 43.478 0.00 0.00 40.95 2.66
573 587 4.023707 CAGCAAAAGACGAGGATCACTTTT 60.024 41.667 0.00 0.00 45.25 2.27
574 588 4.580580 AGCAAAAGACGAGGATCACTTTTT 59.419 37.500 0.00 0.00 43.46 1.94
590 604 2.692709 TTTTTGGGATCAGGGAGCAA 57.307 45.000 0.00 0.00 0.00 3.91
591 605 1.923356 TTTTGGGATCAGGGAGCAAC 58.077 50.000 0.00 0.00 0.00 4.17
592 606 1.075601 TTTGGGATCAGGGAGCAACT 58.924 50.000 0.00 0.00 0.00 3.16
593 607 0.620556 TTGGGATCAGGGAGCAACTC 59.379 55.000 0.00 0.00 0.00 3.01
602 616 3.060866 GAGCAACTCCACCCTCGT 58.939 61.111 0.00 0.00 0.00 4.18
603 617 1.079750 GAGCAACTCCACCCTCGTC 60.080 63.158 0.00 0.00 0.00 4.20
604 618 2.432628 GCAACTCCACCCTCGTCG 60.433 66.667 0.00 0.00 0.00 5.12
605 619 2.261671 CAACTCCACCCTCGTCGG 59.738 66.667 0.00 0.00 0.00 4.79
606 620 2.116772 AACTCCACCCTCGTCGGA 59.883 61.111 0.00 0.00 33.16 4.55
607 621 1.532316 AACTCCACCCTCGTCGGAA 60.532 57.895 0.00 0.00 33.16 4.30
608 622 1.533469 AACTCCACCCTCGTCGGAAG 61.533 60.000 0.00 0.00 33.16 3.46
609 623 3.358076 CTCCACCCTCGTCGGAAGC 62.358 68.421 0.00 0.00 33.16 3.86
610 624 3.382832 CCACCCTCGTCGGAAGCT 61.383 66.667 0.00 0.00 33.16 3.74
611 625 2.050350 CCACCCTCGTCGGAAGCTA 61.050 63.158 0.00 0.00 33.16 3.32
612 626 1.433879 CACCCTCGTCGGAAGCTAG 59.566 63.158 0.00 0.00 33.16 3.42
613 627 1.753463 ACCCTCGTCGGAAGCTAGG 60.753 63.158 0.00 0.00 33.16 3.02
614 628 1.453379 CCCTCGTCGGAAGCTAGGA 60.453 63.158 0.00 0.00 33.16 2.94
615 629 0.824182 CCCTCGTCGGAAGCTAGGAT 60.824 60.000 0.00 0.00 33.16 3.24
616 630 0.594110 CCTCGTCGGAAGCTAGGATC 59.406 60.000 0.00 0.00 33.16 3.36
617 631 0.594110 CTCGTCGGAAGCTAGGATCC 59.406 60.000 2.48 2.48 0.00 3.36
618 632 0.106868 TCGTCGGAAGCTAGGATCCA 60.107 55.000 15.82 0.00 35.34 3.41
619 633 0.312416 CGTCGGAAGCTAGGATCCAG 59.688 60.000 15.82 10.48 35.34 3.86
620 634 0.032815 GTCGGAAGCTAGGATCCAGC 59.967 60.000 21.70 21.70 39.41 4.85
621 635 0.397114 TCGGAAGCTAGGATCCAGCA 60.397 55.000 27.31 11.75 41.66 4.41
622 636 0.465705 CGGAAGCTAGGATCCAGCAA 59.534 55.000 27.31 7.27 41.66 3.91
623 637 1.539929 CGGAAGCTAGGATCCAGCAAG 60.540 57.143 27.31 15.52 41.66 4.01
624 638 1.202746 GGAAGCTAGGATCCAGCAAGG 60.203 57.143 27.31 9.17 41.66 3.61
625 639 0.182299 AAGCTAGGATCCAGCAAGGC 59.818 55.000 27.31 16.31 41.66 4.35
626 640 0.984961 AGCTAGGATCCAGCAAGGCA 60.985 55.000 27.31 0.77 41.66 4.75
627 641 0.107017 GCTAGGATCCAGCAAGGCAA 60.107 55.000 23.33 0.00 38.93 4.52
628 642 1.683011 GCTAGGATCCAGCAAGGCAAA 60.683 52.381 23.33 0.00 38.93 3.68
629 643 2.295885 CTAGGATCCAGCAAGGCAAAG 58.704 52.381 15.82 0.00 37.29 2.77
630 644 0.969409 AGGATCCAGCAAGGCAAAGC 60.969 55.000 15.82 0.00 37.29 3.51
631 645 1.252904 GGATCCAGCAAGGCAAAGCA 61.253 55.000 6.95 0.00 37.29 3.91
632 646 0.604578 GATCCAGCAAGGCAAAGCAA 59.395 50.000 0.00 0.00 37.29 3.91
633 647 0.319405 ATCCAGCAAGGCAAAGCAAC 59.681 50.000 0.00 0.00 37.29 4.17
634 648 1.662446 CCAGCAAGGCAAAGCAACG 60.662 57.895 0.00 0.00 0.00 4.10
635 649 1.066257 CAGCAAGGCAAAGCAACGT 59.934 52.632 0.00 0.00 0.00 3.99
636 650 0.528249 CAGCAAGGCAAAGCAACGTT 60.528 50.000 0.00 0.00 0.00 3.99
637 651 1.028905 AGCAAGGCAAAGCAACGTTA 58.971 45.000 0.00 0.00 0.00 3.18
638 652 1.407258 AGCAAGGCAAAGCAACGTTAA 59.593 42.857 0.00 0.00 0.00 2.01
639 653 2.159170 AGCAAGGCAAAGCAACGTTAAA 60.159 40.909 0.00 0.00 0.00 1.52
640 654 2.605366 GCAAGGCAAAGCAACGTTAAAA 59.395 40.909 0.00 0.00 0.00 1.52
641 655 3.543265 GCAAGGCAAAGCAACGTTAAAAC 60.543 43.478 0.00 0.00 0.00 2.43
642 656 3.512033 AGGCAAAGCAACGTTAAAACA 57.488 38.095 0.00 0.00 0.00 2.83
643 657 4.053469 AGGCAAAGCAACGTTAAAACAT 57.947 36.364 0.00 0.00 0.00 2.71
644 658 3.801594 AGGCAAAGCAACGTTAAAACATG 59.198 39.130 0.00 0.00 0.00 3.21
645 659 3.531015 GCAAAGCAACGTTAAAACATGC 58.469 40.909 0.00 0.00 39.98 4.06
646 660 3.771247 CAAAGCAACGTTAAAACATGCG 58.229 40.909 0.00 0.00 42.67 4.73
647 661 2.044888 AGCAACGTTAAAACATGCGG 57.955 45.000 0.00 0.00 42.67 5.69
648 662 0.433115 GCAACGTTAAAACATGCGGC 59.567 50.000 0.00 0.00 33.61 6.53
649 663 1.928595 GCAACGTTAAAACATGCGGCT 60.929 47.619 0.00 0.00 33.61 5.52
650 664 1.713404 CAACGTTAAAACATGCGGCTG 59.287 47.619 0.00 0.00 0.00 4.85
651 665 0.386731 ACGTTAAAACATGCGGCTGC 60.387 50.000 11.65 11.65 43.20 5.25
652 666 0.109781 CGTTAAAACATGCGGCTGCT 60.110 50.000 20.27 0.83 43.34 4.24
653 667 1.339711 GTTAAAACATGCGGCTGCTG 58.660 50.000 20.27 16.21 43.34 4.41
654 668 1.068610 GTTAAAACATGCGGCTGCTGA 60.069 47.619 20.27 0.00 43.34 4.26
655 669 1.242989 TAAAACATGCGGCTGCTGAA 58.757 45.000 20.27 0.67 43.34 3.02
656 670 0.604578 AAAACATGCGGCTGCTGAAT 59.395 45.000 20.27 3.87 43.34 2.57
657 671 0.171903 AAACATGCGGCTGCTGAATC 59.828 50.000 20.27 0.00 43.34 2.52
658 672 0.679002 AACATGCGGCTGCTGAATCT 60.679 50.000 20.27 0.00 43.34 2.40
659 673 0.679002 ACATGCGGCTGCTGAATCTT 60.679 50.000 20.27 0.00 43.34 2.40
660 674 0.029035 CATGCGGCTGCTGAATCTTC 59.971 55.000 20.27 0.00 43.34 2.87
661 675 1.099879 ATGCGGCTGCTGAATCTTCC 61.100 55.000 20.27 0.00 43.34 3.46
662 676 2.476320 GCGGCTGCTGAATCTTCCC 61.476 63.158 13.72 0.00 38.39 3.97
663 677 1.078214 CGGCTGCTGAATCTTCCCA 60.078 57.895 1.17 0.00 0.00 4.37
664 678 1.372087 CGGCTGCTGAATCTTCCCAC 61.372 60.000 1.17 0.00 0.00 4.61
665 679 0.322816 GGCTGCTGAATCTTCCCACA 60.323 55.000 0.00 0.00 0.00 4.17
666 680 0.807496 GCTGCTGAATCTTCCCACAC 59.193 55.000 0.00 0.00 0.00 3.82
667 681 1.081892 CTGCTGAATCTTCCCACACG 58.918 55.000 0.00 0.00 0.00 4.49
668 682 0.955428 TGCTGAATCTTCCCACACGC 60.955 55.000 0.00 0.00 0.00 5.34
669 683 1.648467 GCTGAATCTTCCCACACGCC 61.648 60.000 0.00 0.00 0.00 5.68
670 684 1.002624 TGAATCTTCCCACACGCCC 60.003 57.895 0.00 0.00 0.00 6.13
671 685 1.749258 GAATCTTCCCACACGCCCC 60.749 63.158 0.00 0.00 0.00 5.80
672 686 3.282374 AATCTTCCCACACGCCCCC 62.282 63.158 0.00 0.00 0.00 5.40
673 687 4.974438 TCTTCCCACACGCCCCCT 62.974 66.667 0.00 0.00 0.00 4.79
674 688 4.410400 CTTCCCACACGCCCCCTC 62.410 72.222 0.00 0.00 0.00 4.30
684 698 4.129148 GCCCCCTCCACCACCATC 62.129 72.222 0.00 0.00 0.00 3.51
685 699 3.797353 CCCCCTCCACCACCATCG 61.797 72.222 0.00 0.00 0.00 3.84
686 700 3.009115 CCCCTCCACCACCATCGT 61.009 66.667 0.00 0.00 0.00 3.73
687 701 2.268920 CCCTCCACCACCATCGTG 59.731 66.667 0.00 0.00 39.91 4.35
715 729 4.314440 ACGTGCGCCATCACCACT 62.314 61.111 4.18 0.00 33.57 4.00
717 731 2.669569 GTGCGCCATCACCACTGT 60.670 61.111 4.18 0.00 0.00 3.55
772 787 0.764752 CCCCCTCCCCATGTCTCTAC 60.765 65.000 0.00 0.00 0.00 2.59
792 807 3.925630 ATGGCTGAGCACCCAACGG 62.926 63.158 6.82 0.00 34.25 4.44
796 811 2.359850 TGAGCACCCAACGGCATC 60.360 61.111 0.00 0.00 0.00 3.91
817 832 2.415168 CTCGCCACACAACGTCATAAAT 59.585 45.455 0.00 0.00 0.00 1.40
837 852 1.621317 TCCAAAGACCAGCACGTATGA 59.379 47.619 1.66 0.00 0.00 2.15
838 853 2.037902 TCCAAAGACCAGCACGTATGAA 59.962 45.455 1.66 0.00 0.00 2.57
839 854 2.416547 CCAAAGACCAGCACGTATGAAG 59.583 50.000 1.66 0.00 0.00 3.02
840 855 1.726853 AAGACCAGCACGTATGAAGC 58.273 50.000 1.66 0.00 0.00 3.86
841 856 0.108138 AGACCAGCACGTATGAAGCC 60.108 55.000 1.66 0.00 0.00 4.35
842 857 1.421410 GACCAGCACGTATGAAGCCG 61.421 60.000 1.66 0.00 0.00 5.52
843 858 1.153647 CCAGCACGTATGAAGCCGA 60.154 57.895 1.66 0.00 0.00 5.54
844 859 1.421410 CCAGCACGTATGAAGCCGAC 61.421 60.000 1.66 0.00 0.00 4.79
845 860 0.735978 CAGCACGTATGAAGCCGACA 60.736 55.000 0.00 0.00 0.00 4.35
846 861 0.037697 AGCACGTATGAAGCCGACAA 60.038 50.000 0.00 0.00 0.00 3.18
847 862 1.006832 GCACGTATGAAGCCGACAAT 58.993 50.000 0.00 0.00 0.00 2.71
848 863 1.004927 GCACGTATGAAGCCGACAATC 60.005 52.381 0.00 0.00 0.00 2.67
849 864 2.267426 CACGTATGAAGCCGACAATCA 58.733 47.619 0.00 0.00 0.00 2.57
850 865 2.670905 CACGTATGAAGCCGACAATCAA 59.329 45.455 0.00 0.00 0.00 2.57
851 866 2.671396 ACGTATGAAGCCGACAATCAAC 59.329 45.455 0.00 0.00 0.00 3.18
852 867 2.670905 CGTATGAAGCCGACAATCAACA 59.329 45.455 0.00 0.00 0.00 3.33
853 868 3.483574 CGTATGAAGCCGACAATCAACAC 60.484 47.826 0.00 0.00 0.00 3.32
854 869 2.254546 TGAAGCCGACAATCAACACT 57.745 45.000 0.00 0.00 0.00 3.55
869 884 4.993028 TCAACACTAAGGCCCAAACTAAT 58.007 39.130 0.00 0.00 0.00 1.73
878 893 3.158676 GGCCCAAACTAATTGTACCACA 58.841 45.455 0.00 0.00 37.32 4.17
880 895 3.824443 GCCCAAACTAATTGTACCACACT 59.176 43.478 0.00 0.00 37.32 3.55
883 898 6.569035 GCCCAAACTAATTGTACCACACTTAC 60.569 42.308 0.00 0.00 37.32 2.34
900 915 5.643777 ACACTTACTATGTGCAAGAACATCC 59.356 40.000 0.00 0.00 41.09 3.51
904 919 1.742761 ATGTGCAAGAACATCCCGAG 58.257 50.000 0.00 0.00 35.92 4.63
915 930 4.798682 TCCCGAGCTCCCCTTCCC 62.799 72.222 8.47 0.00 0.00 3.97
925 940 3.157949 CCCTTCCCTCCTCGCTCC 61.158 72.222 0.00 0.00 0.00 4.70
960 975 2.291043 GGAGGAGGGGCAAAGACGA 61.291 63.158 0.00 0.00 0.00 4.20
969 984 2.125512 CAAAGACGAGCCGGGGAG 60.126 66.667 2.18 0.00 0.00 4.30
1040 1064 0.109597 CAGCAAACAACCAGATCGCC 60.110 55.000 0.00 0.00 0.00 5.54
1041 1065 0.537143 AGCAAACAACCAGATCGCCA 60.537 50.000 0.00 0.00 0.00 5.69
1042 1066 0.109597 GCAAACAACCAGATCGCCAG 60.110 55.000 0.00 0.00 0.00 4.85
1056 1144 1.516423 GCCAGGTACGTCTTCCTCC 59.484 63.158 0.00 0.00 30.91 4.30
1099 1187 1.302511 ATTCACACAGACCGCACCC 60.303 57.895 0.00 0.00 0.00 4.61
1209 1299 4.489771 CCTCCACCGCATCACCCC 62.490 72.222 0.00 0.00 0.00 4.95
1212 1302 4.489771 CCACCGCATCACCCCCTC 62.490 72.222 0.00 0.00 0.00 4.30
1241 1343 4.463879 CCCAGCACCAGCCTCGAG 62.464 72.222 5.13 5.13 43.56 4.04
1255 1357 4.767255 CGAGCCCAGCCACTCACC 62.767 72.222 0.00 0.00 32.98 4.02
1256 1358 4.767255 GAGCCCAGCCACTCACCG 62.767 72.222 0.00 0.00 32.98 4.94
1280 1382 2.357361 CCTCCCCGCCAAAACCTAAATA 60.357 50.000 0.00 0.00 0.00 1.40
1291 1393 3.655615 AACCTAAATACCCAATCGCCA 57.344 42.857 0.00 0.00 0.00 5.69
1294 1396 2.227194 CTAAATACCCAATCGCCACCC 58.773 52.381 0.00 0.00 0.00 4.61
1826 2090 2.982130 CAGGTTCCAGGTCTCCGG 59.018 66.667 0.00 0.00 0.00 5.14
1860 2124 3.936203 AACCACCCGCTCTTCGCA 61.936 61.111 0.00 0.00 39.08 5.10
1939 2221 1.802069 TTTCATTGACGACGATGCCA 58.198 45.000 9.88 0.00 37.70 4.92
1940 2222 1.358877 TTCATTGACGACGATGCCAG 58.641 50.000 9.88 0.00 37.70 4.85
1941 2223 0.246360 TCATTGACGACGATGCCAGT 59.754 50.000 9.88 0.00 37.70 4.00
1942 2224 0.371301 CATTGACGACGATGCCAGTG 59.629 55.000 0.00 0.00 32.13 3.66
1943 2225 1.361668 ATTGACGACGATGCCAGTGC 61.362 55.000 0.00 0.00 38.26 4.40
1944 2226 3.188786 GACGACGATGCCAGTGCC 61.189 66.667 0.00 0.00 36.33 5.01
2115 2397 1.079127 CGAGGACAAGGTGGCGAAT 60.079 57.895 0.00 0.00 0.00 3.34
2142 2424 1.375523 GGTCGACGCCAAGATGGTT 60.376 57.895 9.92 0.00 40.46 3.67
2271 2553 4.373116 GTCGTCTTCGGGCTGGCA 62.373 66.667 2.88 0.00 37.69 4.92
2578 2865 2.256591 GCTGCGTGGGATGCTATGG 61.257 63.158 0.00 0.00 0.00 2.74
2629 2916 0.319900 GCTGCAGAGGTTGTTCGAGA 60.320 55.000 20.43 0.00 0.00 4.04
2725 3012 2.802667 CTGAATTCCGAGGTGCGCG 61.803 63.158 0.00 0.00 39.11 6.86
2830 4287 2.872858 GAGATGGAATACGGTTCAAGGC 59.127 50.000 5.38 0.00 0.00 4.35
2862 4319 0.332972 ACCTCAAAATCAGAGCCCCC 59.667 55.000 0.00 0.00 0.00 5.40
2883 4340 0.976641 TTCTGACACAGGCTTCCGAT 59.023 50.000 0.00 0.00 31.51 4.18
2958 4415 1.519455 AGCTTACATCGTGAGCCGC 60.519 57.895 7.22 0.00 44.55 6.53
2968 4425 2.047370 TGAGCCGCGATGAAAGCA 60.047 55.556 8.23 0.00 34.19 3.91
3055 4513 1.273267 ACCCTATGGAGCAGACTGTCA 60.273 52.381 10.88 1.34 34.81 3.58
3080 4538 0.599204 TCGTGCGGGAAGTTTGAGAC 60.599 55.000 0.00 0.00 0.00 3.36
3123 4581 5.927689 CCATGCTCTCAAGATTCTAGATGTC 59.072 44.000 0.00 0.00 0.00 3.06
3186 4644 0.249031 GGACCAAATATGCAAGGCGC 60.249 55.000 0.00 0.00 42.89 6.53
3198 4656 3.883744 AAGGCGCTTGACCTCACCG 62.884 63.158 7.64 0.00 36.14 4.94
3262 4735 2.596904 TTCTAATCGCTACCAGCACC 57.403 50.000 0.00 0.00 42.58 5.01
3405 5070 1.717937 CATTAGCAGCGCACCTGTC 59.282 57.895 11.47 0.00 43.71 3.51
3481 5146 4.873817 TGGCACTGAATCAGAAAATGTTG 58.126 39.130 18.20 3.87 35.18 3.33
3489 5154 7.149973 CTGAATCAGAAAATGTTGTGGACATT 58.850 34.615 3.77 0.00 45.73 2.71
3674 5339 6.374333 TCTGGAAATGCTATGTTTCAGGTAAC 59.626 38.462 0.00 0.00 37.32 2.50
3698 5363 6.151817 ACCTTGCTATTTTCTTCATTGAGGTC 59.848 38.462 0.00 0.00 0.00 3.85
3780 5456 2.494870 GCCTAATTGGGATCCATCATGC 59.505 50.000 15.23 3.17 36.00 4.06
3908 5688 5.125097 CCATGCATCTTATAATTCCTCCTGC 59.875 44.000 0.00 0.00 0.00 4.85
3909 5689 5.573380 TGCATCTTATAATTCCTCCTGCT 57.427 39.130 0.00 0.00 0.00 4.24
3910 5690 5.945310 TGCATCTTATAATTCCTCCTGCTT 58.055 37.500 0.00 0.00 0.00 3.91
3911 5691 6.367983 TGCATCTTATAATTCCTCCTGCTTT 58.632 36.000 0.00 0.00 0.00 3.51
4007 5790 8.277713 ACGTGAGTGTAAAATTTATGTGTACAC 58.722 33.333 19.36 19.36 46.97 2.90
4047 5830 9.743057 TTAAGTGTTTGATGAAAATTAGGTGTG 57.257 29.630 0.00 0.00 0.00 3.82
4064 5847 1.635487 TGTGCCAGGCCTAAGAATCTT 59.365 47.619 3.98 0.00 0.00 2.40
4264 6065 8.288689 TGAAGTGCCTCCCTAAAATAATTTAC 57.711 34.615 0.00 0.00 0.00 2.01
4336 6145 4.673968 AGGGGACTGACTTTTTAAATCCC 58.326 43.478 11.00 11.00 43.15 3.85
4337 6146 4.107311 AGGGGACTGACTTTTTAAATCCCA 59.893 41.667 18.22 2.75 45.28 4.37
4338 6147 5.023452 GGGGACTGACTTTTTAAATCCCAT 58.977 41.667 18.22 0.00 45.28 4.00
4339 6148 5.105351 GGGGACTGACTTTTTAAATCCCATG 60.105 44.000 18.22 0.00 45.28 3.66
4340 6149 5.105351 GGGACTGACTTTTTAAATCCCATGG 60.105 44.000 13.61 4.14 43.33 3.66
4341 6150 5.405935 ACTGACTTTTTAAATCCCATGGC 57.594 39.130 6.09 0.00 0.00 4.40
4430 6239 3.181476 ACCACTTTGGATTGAACACTTGC 60.181 43.478 0.00 0.00 40.96 4.01
4470 6279 8.385111 GCCAGTGTAATGATCATTGAAATTTTG 58.615 33.333 27.59 16.15 32.50 2.44
4496 6305 1.066071 GCAGTTACCTTCTCAGGACCC 60.066 57.143 0.00 0.00 44.19 4.46
4803 6765 5.182570 TCTTTGGAGCACAATCAAATGAGAG 59.817 40.000 0.00 0.00 39.21 3.20
4807 6769 3.428532 AGCACAATCAAATGAGAGGCTT 58.571 40.909 0.00 0.00 0.00 4.35
4808 6770 3.442977 AGCACAATCAAATGAGAGGCTTC 59.557 43.478 0.00 0.00 0.00 3.86
4809 6771 3.442977 GCACAATCAAATGAGAGGCTTCT 59.557 43.478 0.00 0.00 36.01 2.85
4814 6777 7.066645 CACAATCAAATGAGAGGCTTCTTATGA 59.933 37.037 3.77 5.32 30.73 2.15
4815 6778 7.778853 ACAATCAAATGAGAGGCTTCTTATGAT 59.221 33.333 3.77 7.19 30.73 2.45
4817 6780 6.656902 TCAAATGAGAGGCTTCTTATGATGT 58.343 36.000 3.77 0.00 30.73 3.06
4818 6781 6.765036 TCAAATGAGAGGCTTCTTATGATGTC 59.235 38.462 3.77 0.00 30.73 3.06
4821 6784 4.141846 TGAGAGGCTTCTTATGATGTCCAC 60.142 45.833 0.00 0.00 32.53 4.02
4822 6785 3.126831 GAGGCTTCTTATGATGTCCACG 58.873 50.000 0.00 0.00 0.00 4.94
4826 6789 3.126858 GCTTCTTATGATGTCCACGCAAA 59.873 43.478 0.00 0.00 0.00 3.68
4827 6790 4.379394 GCTTCTTATGATGTCCACGCAAAA 60.379 41.667 0.00 0.00 0.00 2.44
4865 6846 5.948742 TGATGTCCACAACTGTATATGGA 57.051 39.130 4.07 4.07 38.94 3.41
4891 6872 0.820891 AAGCTGCACAGGTGGACTTG 60.821 55.000 2.65 0.00 39.39 3.16
4895 6876 0.107831 TGCACAGGTGGACTTGTACC 59.892 55.000 1.10 0.00 34.23 3.34
4896 6877 0.107831 GCACAGGTGGACTTGTACCA 59.892 55.000 1.10 0.00 39.46 3.25
4963 6945 3.260884 TCTCTTGTTACTAGCAACCTGGG 59.739 47.826 3.36 0.00 0.00 4.45
4984 7009 6.326375 TGGGCGCTTTGTATTTATTTTAGTG 58.674 36.000 7.64 0.00 0.00 2.74
4985 7010 5.231357 GGGCGCTTTGTATTTATTTTAGTGC 59.769 40.000 7.64 0.00 37.04 4.40
5115 7143 4.122776 ACTGATATGATCTGTTTCACCGC 58.877 43.478 0.00 0.00 38.11 5.68
5116 7144 3.466836 TGATATGATCTGTTTCACCGCC 58.533 45.455 0.00 0.00 0.00 6.13
5119 7147 0.684535 TGATCTGTTTCACCGCCTCA 59.315 50.000 0.00 0.00 0.00 3.86
5121 7149 1.464997 GATCTGTTTCACCGCCTCAAC 59.535 52.381 0.00 0.00 0.00 3.18
5235 7288 3.760580 AGCATATAAGACAGGGTGCTC 57.239 47.619 0.00 0.00 38.43 4.26
5246 7299 1.435256 AGGGTGCTCCTGTTTGTACT 58.565 50.000 4.53 0.00 46.07 2.73
5247 7300 1.348036 AGGGTGCTCCTGTTTGTACTC 59.652 52.381 4.53 0.00 46.07 2.59
5248 7301 1.348036 GGGTGCTCCTGTTTGTACTCT 59.652 52.381 4.53 0.00 0.00 3.24
5266 7319 0.179108 CTACTTGGTAGCGCTGGGAC 60.179 60.000 22.90 10.65 29.12 4.46
5381 7442 1.974236 AGTGAGAACCTGGGAAGAGTG 59.026 52.381 0.00 0.00 0.00 3.51
5383 7444 2.104963 GTGAGAACCTGGGAAGAGTGTT 59.895 50.000 0.00 0.00 0.00 3.32
5586 7654 5.415221 TGCTTTTGAAATCTTTTGTCCGTT 58.585 33.333 0.00 0.00 0.00 4.44
5626 7694 9.219603 TGAAATCTCTTTACTGGATGTTTGTAG 57.780 33.333 0.00 0.00 0.00 2.74
5643 7711 6.378564 TGTTTGTAGAATTGGTCACAGGAAAA 59.621 34.615 0.00 0.00 0.00 2.29
5645 7713 8.573035 GTTTGTAGAATTGGTCACAGGAAAATA 58.427 33.333 0.00 0.00 0.00 1.40
5653 7721 3.251004 GGTCACAGGAAAATATGATCGCC 59.749 47.826 0.00 0.00 0.00 5.54
5661 7729 4.520492 GGAAAATATGATCGCCTGGACATT 59.480 41.667 0.00 0.00 0.00 2.71
5683 7751 3.076621 AGAAGCAATTCGTGATGCAGAA 58.923 40.909 10.63 0.00 44.95 3.02
5684 7752 3.503363 AGAAGCAATTCGTGATGCAGAAA 59.497 39.130 10.63 0.00 44.95 2.52
5685 7753 4.157289 AGAAGCAATTCGTGATGCAGAAAT 59.843 37.500 10.63 0.00 44.95 2.17
5695 7768 5.525012 TCGTGATGCAGAAATTAGAGGATTG 59.475 40.000 0.00 0.00 0.00 2.67
5700 7773 3.243334 GCAGAAATTAGAGGATTGCAGCC 60.243 47.826 0.00 0.00 0.00 4.85
5719 7800 0.813610 CGGCTGCGATGGTGGATAAA 60.814 55.000 0.00 0.00 0.00 1.40
5720 7801 0.947244 GGCTGCGATGGTGGATAAAG 59.053 55.000 0.00 0.00 0.00 1.85
5738 7819 7.094205 TGGATAAAGTTTTCTGAATGGAAGAGC 60.094 37.037 0.00 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 1.571457 TCCCACCCCTGTTCAGAAAAA 59.429 47.619 1.00 0.00 0.00 1.94
42 43 1.227249 TCCCACCCCTGTTCAGAAAA 58.773 50.000 1.00 0.00 0.00 2.29
43 44 1.227249 TTCCCACCCCTGTTCAGAAA 58.773 50.000 1.00 0.00 0.00 2.52
44 45 1.227249 TTTCCCACCCCTGTTCAGAA 58.773 50.000 1.00 0.00 0.00 3.02
45 46 1.455822 ATTTCCCACCCCTGTTCAGA 58.544 50.000 1.00 0.00 0.00 3.27
46 47 2.309136 AATTTCCCACCCCTGTTCAG 57.691 50.000 0.00 0.00 0.00 3.02
47 48 2.785357 AAATTTCCCACCCCTGTTCA 57.215 45.000 0.00 0.00 0.00 3.18
48 49 5.554437 TTTTAAATTTCCCACCCCTGTTC 57.446 39.130 0.00 0.00 0.00 3.18
49 50 5.977821 TTTTTAAATTTCCCACCCCTGTT 57.022 34.783 0.00 0.00 0.00 3.16
70 71 3.949132 ACTGCCACACCATTTTGTTTTT 58.051 36.364 0.00 0.00 0.00 1.94
71 72 3.625649 ACTGCCACACCATTTTGTTTT 57.374 38.095 0.00 0.00 0.00 2.43
72 73 4.744795 TTACTGCCACACCATTTTGTTT 57.255 36.364 0.00 0.00 0.00 2.83
73 74 4.744795 TTTACTGCCACACCATTTTGTT 57.255 36.364 0.00 0.00 0.00 2.83
74 75 4.588528 AGATTTACTGCCACACCATTTTGT 59.411 37.500 0.00 0.00 0.00 2.83
75 76 5.138125 AGATTTACTGCCACACCATTTTG 57.862 39.130 0.00 0.00 0.00 2.44
76 77 4.832266 TGAGATTTACTGCCACACCATTTT 59.168 37.500 0.00 0.00 0.00 1.82
77 78 4.218417 GTGAGATTTACTGCCACACCATTT 59.782 41.667 0.00 0.00 0.00 2.32
78 79 3.758554 GTGAGATTTACTGCCACACCATT 59.241 43.478 0.00 0.00 0.00 3.16
79 80 3.244875 TGTGAGATTTACTGCCACACCAT 60.245 43.478 0.00 0.00 31.44 3.55
80 81 2.105649 TGTGAGATTTACTGCCACACCA 59.894 45.455 0.00 0.00 31.44 4.17
81 82 2.778299 TGTGAGATTTACTGCCACACC 58.222 47.619 0.00 0.00 31.44 4.16
82 83 4.036262 TGTTTGTGAGATTTACTGCCACAC 59.964 41.667 0.00 0.00 34.56 3.82
83 84 4.203226 TGTTTGTGAGATTTACTGCCACA 58.797 39.130 0.00 0.00 33.52 4.17
84 85 4.829064 TGTTTGTGAGATTTACTGCCAC 57.171 40.909 0.00 0.00 0.00 5.01
85 86 5.843673 TTTGTTTGTGAGATTTACTGCCA 57.156 34.783 0.00 0.00 0.00 4.92
113 114 9.665719 AACCTTTGTGTTGTTTCTTTATTTCAT 57.334 25.926 0.00 0.00 0.00 2.57
114 115 9.495572 AAACCTTTGTGTTGTTTCTTTATTTCA 57.504 25.926 0.00 0.00 0.00 2.69
115 116 9.967245 GAAACCTTTGTGTTGTTTCTTTATTTC 57.033 29.630 7.01 0.00 42.73 2.17
125 126 8.941977 GGAATTTTTAGAAACCTTTGTGTTGTT 58.058 29.630 0.00 0.00 0.00 2.83
126 127 8.097662 TGGAATTTTTAGAAACCTTTGTGTTGT 58.902 29.630 0.00 0.00 0.00 3.32
127 128 8.485976 TGGAATTTTTAGAAACCTTTGTGTTG 57.514 30.769 0.00 0.00 0.00 3.33
128 129 9.508642 TTTGGAATTTTTAGAAACCTTTGTGTT 57.491 25.926 0.00 0.00 0.00 3.32
129 130 9.161629 CTTTGGAATTTTTAGAAACCTTTGTGT 57.838 29.630 0.00 0.00 0.00 3.72
130 131 9.377312 TCTTTGGAATTTTTAGAAACCTTTGTG 57.623 29.630 0.00 0.00 0.00 3.33
131 132 9.599866 CTCTTTGGAATTTTTAGAAACCTTTGT 57.400 29.630 0.00 0.00 0.00 2.83
132 133 9.045223 CCTCTTTGGAATTTTTAGAAACCTTTG 57.955 33.333 0.00 0.00 38.35 2.77
133 134 8.768397 ACCTCTTTGGAATTTTTAGAAACCTTT 58.232 29.630 0.00 0.00 39.71 3.11
134 135 8.319057 ACCTCTTTGGAATTTTTAGAAACCTT 57.681 30.769 0.00 0.00 39.71 3.50
135 136 7.015292 GGACCTCTTTGGAATTTTTAGAAACCT 59.985 37.037 0.00 0.00 39.71 3.50
136 137 7.152645 GGACCTCTTTGGAATTTTTAGAAACC 58.847 38.462 0.00 0.00 39.71 3.27
137 138 6.861572 CGGACCTCTTTGGAATTTTTAGAAAC 59.138 38.462 0.00 0.00 39.71 2.78
138 139 6.516028 GCGGACCTCTTTGGAATTTTTAGAAA 60.516 38.462 0.00 0.00 39.71 2.52
139 140 5.048294 GCGGACCTCTTTGGAATTTTTAGAA 60.048 40.000 0.00 0.00 39.71 2.10
140 141 4.457949 GCGGACCTCTTTGGAATTTTTAGA 59.542 41.667 0.00 0.00 39.71 2.10
141 142 4.217550 TGCGGACCTCTTTGGAATTTTTAG 59.782 41.667 0.00 0.00 39.71 1.85
142 143 4.145807 TGCGGACCTCTTTGGAATTTTTA 58.854 39.130 0.00 0.00 39.71 1.52
143 144 2.962421 TGCGGACCTCTTTGGAATTTTT 59.038 40.909 0.00 0.00 39.71 1.94
144 145 2.593026 TGCGGACCTCTTTGGAATTTT 58.407 42.857 0.00 0.00 39.71 1.82
145 146 2.286365 TGCGGACCTCTTTGGAATTT 57.714 45.000 0.00 0.00 39.71 1.82
146 147 2.286365 TTGCGGACCTCTTTGGAATT 57.714 45.000 0.00 0.00 39.71 2.17
147 148 2.493278 CAATTGCGGACCTCTTTGGAAT 59.507 45.455 0.00 0.00 39.71 3.01
148 149 1.885887 CAATTGCGGACCTCTTTGGAA 59.114 47.619 0.00 0.00 39.71 3.53
149 150 1.073125 TCAATTGCGGACCTCTTTGGA 59.927 47.619 0.00 0.00 39.71 3.53
150 151 1.470098 CTCAATTGCGGACCTCTTTGG 59.530 52.381 0.00 0.00 42.93 3.28
151 152 2.426522 TCTCAATTGCGGACCTCTTTG 58.573 47.619 0.00 0.00 0.00 2.77
152 153 2.859165 TCTCAATTGCGGACCTCTTT 57.141 45.000 0.00 0.00 0.00 2.52
153 154 2.859165 TTCTCAATTGCGGACCTCTT 57.141 45.000 0.00 0.00 0.00 2.85
154 155 2.859165 TTTCTCAATTGCGGACCTCT 57.141 45.000 0.00 0.00 0.00 3.69
155 156 3.915437 TTTTTCTCAATTGCGGACCTC 57.085 42.857 0.00 0.00 0.00 3.85
156 157 5.975693 TTATTTTTCTCAATTGCGGACCT 57.024 34.783 0.00 0.00 0.00 3.85
157 158 6.401047 GCTTTTATTTTTCTCAATTGCGGACC 60.401 38.462 0.00 0.00 0.00 4.46
158 159 6.145371 TGCTTTTATTTTTCTCAATTGCGGAC 59.855 34.615 0.00 0.00 0.00 4.79
159 160 6.219473 TGCTTTTATTTTTCTCAATTGCGGA 58.781 32.000 0.00 0.00 0.00 5.54
160 161 6.464895 TGCTTTTATTTTTCTCAATTGCGG 57.535 33.333 0.00 0.00 0.00 5.69
161 162 8.938047 AATTGCTTTTATTTTTCTCAATTGCG 57.062 26.923 0.00 0.00 33.19 4.85
166 167 9.705290 GGACCTAATTGCTTTTATTTTTCTCAA 57.295 29.630 0.00 0.00 0.00 3.02
167 168 8.865090 TGGACCTAATTGCTTTTATTTTTCTCA 58.135 29.630 0.00 0.00 0.00 3.27
168 169 9.705290 TTGGACCTAATTGCTTTTATTTTTCTC 57.295 29.630 0.00 0.00 0.00 2.87
171 172 9.062524 GGTTTGGACCTAATTGCTTTTATTTTT 57.937 29.630 0.00 0.00 42.99 1.94
172 173 7.386573 CGGTTTGGACCTAATTGCTTTTATTTT 59.613 33.333 0.00 0.00 44.20 1.82
173 174 6.871492 CGGTTTGGACCTAATTGCTTTTATTT 59.129 34.615 0.00 0.00 44.20 1.40
174 175 6.394809 CGGTTTGGACCTAATTGCTTTTATT 58.605 36.000 0.00 0.00 44.20 1.40
175 176 5.623596 GCGGTTTGGACCTAATTGCTTTTAT 60.624 40.000 7.50 0.00 44.20 1.40
176 177 4.321378 GCGGTTTGGACCTAATTGCTTTTA 60.321 41.667 7.50 0.00 44.20 1.52
177 178 3.554129 GCGGTTTGGACCTAATTGCTTTT 60.554 43.478 7.50 0.00 44.20 2.27
178 179 2.029380 GCGGTTTGGACCTAATTGCTTT 60.029 45.455 7.50 0.00 44.20 3.51
179 180 1.544246 GCGGTTTGGACCTAATTGCTT 59.456 47.619 7.50 0.00 44.20 3.91
180 181 1.173913 GCGGTTTGGACCTAATTGCT 58.826 50.000 7.50 0.00 44.20 3.91
181 182 1.132453 GAGCGGTTTGGACCTAATTGC 59.868 52.381 6.89 6.89 44.20 3.56
182 183 2.678336 GAGAGCGGTTTGGACCTAATTG 59.322 50.000 0.00 0.00 44.20 2.32
183 184 2.677037 CGAGAGCGGTTTGGACCTAATT 60.677 50.000 0.00 0.00 44.20 1.40
184 185 1.134788 CGAGAGCGGTTTGGACCTAAT 60.135 52.381 0.00 0.00 44.20 1.73
185 186 0.245539 CGAGAGCGGTTTGGACCTAA 59.754 55.000 0.00 0.00 44.20 2.69
186 187 0.609957 TCGAGAGCGGTTTGGACCTA 60.610 55.000 0.00 0.00 44.20 3.08
187 188 1.878656 CTCGAGAGCGGTTTGGACCT 61.879 60.000 6.58 0.00 44.20 3.85
188 189 1.446272 CTCGAGAGCGGTTTGGACC 60.446 63.158 6.58 0.00 42.87 4.46
189 190 0.524862 TACTCGAGAGCGGTTTGGAC 59.475 55.000 21.68 0.00 38.28 4.02
190 191 0.809385 CTACTCGAGAGCGGTTTGGA 59.191 55.000 21.68 0.00 38.28 3.53
191 192 0.809385 TCTACTCGAGAGCGGTTTGG 59.191 55.000 21.68 0.00 38.28 3.28
192 193 2.251893 GTTCTACTCGAGAGCGGTTTG 58.748 52.381 21.68 0.00 34.93 2.93
193 194 1.884579 TGTTCTACTCGAGAGCGGTTT 59.115 47.619 21.68 0.00 38.20 3.27
194 195 1.531423 TGTTCTACTCGAGAGCGGTT 58.469 50.000 21.68 0.00 38.20 4.44
195 196 1.531423 TTGTTCTACTCGAGAGCGGT 58.469 50.000 21.68 0.00 38.20 5.68
196 197 2.631418 TTTGTTCTACTCGAGAGCGG 57.369 50.000 21.68 5.93 38.20 5.52
197 198 5.107453 ACAAAATTTGTTCTACTCGAGAGCG 60.107 40.000 21.68 6.73 42.22 5.03
198 199 6.073765 TGACAAAATTTGTTCTACTCGAGAGC 60.074 38.462 21.68 0.00 45.52 4.09
199 200 7.408132 TGACAAAATTTGTTCTACTCGAGAG 57.592 36.000 21.68 12.21 45.52 3.20
200 201 6.073765 GCTGACAAAATTTGTTCTACTCGAGA 60.074 38.462 21.68 1.61 45.52 4.04
201 202 6.074005 GCTGACAAAATTTGTTCTACTCGAG 58.926 40.000 13.00 11.84 45.52 4.04
202 203 5.333035 CGCTGACAAAATTTGTTCTACTCGA 60.333 40.000 13.00 0.00 45.52 4.04
203 204 4.840772 CGCTGACAAAATTTGTTCTACTCG 59.159 41.667 13.00 7.44 45.52 4.18
204 205 4.613031 GCGCTGACAAAATTTGTTCTACTC 59.387 41.667 13.00 0.00 45.52 2.59
205 206 4.537015 GCGCTGACAAAATTTGTTCTACT 58.463 39.130 13.00 0.00 45.52 2.57
206 207 3.668656 GGCGCTGACAAAATTTGTTCTAC 59.331 43.478 13.00 0.77 45.52 2.59
207 208 3.305064 GGGCGCTGACAAAATTTGTTCTA 60.305 43.478 13.00 2.55 45.52 2.10
208 209 2.545742 GGGCGCTGACAAAATTTGTTCT 60.546 45.455 13.00 0.00 45.52 3.01
209 210 1.792367 GGGCGCTGACAAAATTTGTTC 59.208 47.619 13.00 7.02 45.52 3.18
210 211 1.412343 AGGGCGCTGACAAAATTTGTT 59.588 42.857 13.00 0.00 45.52 2.83
217 218 2.597217 CCCAAGGGCGCTGACAAA 60.597 61.111 7.64 0.00 0.00 2.83
239 240 2.955342 ATAGGACGGAGGGAGTAGTC 57.045 55.000 0.00 0.00 0.00 2.59
282 292 1.063174 CGGTCTTACGAAGTACTCCCG 59.937 57.143 13.85 13.85 45.76 5.14
290 304 3.509388 ACCAAGCGGTCTTACGAAG 57.491 52.632 0.00 0.00 44.71 3.79
341 355 5.473504 GCCATAATGTTGTTATAGGGTGGAG 59.526 44.000 0.00 0.00 0.00 3.86
365 379 2.301346 GGTCATATCAGTGCCAAAGGG 58.699 52.381 0.00 0.00 37.18 3.95
366 380 1.942657 CGGTCATATCAGTGCCAAAGG 59.057 52.381 0.00 0.00 0.00 3.11
369 383 1.199615 TCCGGTCATATCAGTGCCAA 58.800 50.000 0.00 0.00 0.00 4.52
372 386 1.412710 TCCTTCCGGTCATATCAGTGC 59.587 52.381 0.00 0.00 0.00 4.40
373 387 3.819564 TTCCTTCCGGTCATATCAGTG 57.180 47.619 0.00 0.00 0.00 3.66
374 388 6.099845 AGTTTATTCCTTCCGGTCATATCAGT 59.900 38.462 0.00 0.00 0.00 3.41
375 389 6.525629 AGTTTATTCCTTCCGGTCATATCAG 58.474 40.000 0.00 0.00 0.00 2.90
376 390 6.494666 AGTTTATTCCTTCCGGTCATATCA 57.505 37.500 0.00 0.00 0.00 2.15
380 394 4.270008 CCAAGTTTATTCCTTCCGGTCAT 58.730 43.478 0.00 0.00 0.00 3.06
381 395 3.681593 CCAAGTTTATTCCTTCCGGTCA 58.318 45.455 0.00 0.00 0.00 4.02
382 396 2.422479 GCCAAGTTTATTCCTTCCGGTC 59.578 50.000 0.00 0.00 0.00 4.79
383 397 2.443416 GCCAAGTTTATTCCTTCCGGT 58.557 47.619 0.00 0.00 0.00 5.28
384 398 1.749063 GGCCAAGTTTATTCCTTCCGG 59.251 52.381 0.00 0.00 0.00 5.14
385 399 2.163613 GTGGCCAAGTTTATTCCTTCCG 59.836 50.000 7.24 0.00 0.00 4.30
386 400 2.496070 GGTGGCCAAGTTTATTCCTTCC 59.504 50.000 7.24 0.00 0.00 3.46
387 401 3.431415 AGGTGGCCAAGTTTATTCCTTC 58.569 45.455 7.24 0.00 0.00 3.46
388 402 3.542969 AGGTGGCCAAGTTTATTCCTT 57.457 42.857 7.24 0.00 0.00 3.36
389 403 3.542969 AAGGTGGCCAAGTTTATTCCT 57.457 42.857 7.24 3.71 0.00 3.36
390 404 4.039852 TCAAAAGGTGGCCAAGTTTATTCC 59.960 41.667 7.24 0.65 0.00 3.01
392 406 4.653801 AGTCAAAAGGTGGCCAAGTTTATT 59.346 37.500 7.24 0.00 29.16 1.40
394 408 3.637769 AGTCAAAAGGTGGCCAAGTTTA 58.362 40.909 7.24 0.00 29.16 2.01
395 409 2.466846 AGTCAAAAGGTGGCCAAGTTT 58.533 42.857 7.24 7.48 29.16 2.66
396 410 2.159179 AGTCAAAAGGTGGCCAAGTT 57.841 45.000 7.24 0.00 29.16 2.66
397 411 2.441750 TCTAGTCAAAAGGTGGCCAAGT 59.558 45.455 7.24 0.00 29.16 3.16
398 412 3.140325 TCTAGTCAAAAGGTGGCCAAG 57.860 47.619 7.24 0.00 29.16 3.61
399 413 3.486383 CTTCTAGTCAAAAGGTGGCCAA 58.514 45.455 7.24 0.00 29.16 4.52
401 415 2.039879 TCCTTCTAGTCAAAAGGTGGCC 59.960 50.000 0.00 0.00 42.28 5.36
402 416 3.418684 TCCTTCTAGTCAAAAGGTGGC 57.581 47.619 7.60 0.00 42.28 5.01
403 417 5.412904 GTCATTCCTTCTAGTCAAAAGGTGG 59.587 44.000 7.60 1.01 42.28 4.61
404 418 5.120830 CGTCATTCCTTCTAGTCAAAAGGTG 59.879 44.000 7.60 1.55 42.28 4.00
405 419 5.238583 CGTCATTCCTTCTAGTCAAAAGGT 58.761 41.667 7.60 0.00 42.28 3.50
406 420 4.631813 CCGTCATTCCTTCTAGTCAAAAGG 59.368 45.833 2.19 2.19 42.89 3.11
407 421 4.093556 GCCGTCATTCCTTCTAGTCAAAAG 59.906 45.833 0.00 0.00 0.00 2.27
408 422 4.000988 GCCGTCATTCCTTCTAGTCAAAA 58.999 43.478 0.00 0.00 0.00 2.44
411 425 2.427453 GAGCCGTCATTCCTTCTAGTCA 59.573 50.000 0.00 0.00 0.00 3.41
415 429 2.034685 CGATGAGCCGTCATTCCTTCTA 59.965 50.000 0.00 0.00 43.92 2.10
416 430 1.202463 CGATGAGCCGTCATTCCTTCT 60.202 52.381 0.00 0.00 43.92 2.85
418 432 0.179073 CCGATGAGCCGTCATTCCTT 60.179 55.000 0.00 0.00 43.92 3.36
420 434 0.598680 CTCCGATGAGCCGTCATTCC 60.599 60.000 0.00 0.00 43.92 3.01
421 435 0.385751 TCTCCGATGAGCCGTCATTC 59.614 55.000 0.00 0.00 43.92 2.67
422 436 0.824109 TTCTCCGATGAGCCGTCATT 59.176 50.000 0.00 0.00 43.92 2.57
423 437 0.387202 CTTCTCCGATGAGCCGTCAT 59.613 55.000 0.00 0.00 46.75 3.06
424 438 1.667154 CCTTCTCCGATGAGCCGTCA 61.667 60.000 0.00 0.00 38.58 4.35
425 439 1.066587 CCTTCTCCGATGAGCCGTC 59.933 63.158 0.00 0.00 38.58 4.79
426 440 3.082579 GCCTTCTCCGATGAGCCGT 62.083 63.158 0.00 0.00 38.58 5.68
427 441 2.279784 GCCTTCTCCGATGAGCCG 60.280 66.667 0.00 0.00 38.58 5.52
428 442 2.110006 GGCCTTCTCCGATGAGCC 59.890 66.667 0.00 0.00 38.58 4.70
436 450 0.831307 ATAGGTTGTCGGCCTTCTCC 59.169 55.000 0.00 0.00 37.54 3.71
437 451 1.480954 TGATAGGTTGTCGGCCTTCTC 59.519 52.381 0.00 0.00 37.54 2.87
439 453 1.207329 ACTGATAGGTTGTCGGCCTTC 59.793 52.381 0.00 0.00 37.54 3.46
442 456 1.202498 GGTACTGATAGGTTGTCGGCC 60.202 57.143 0.00 0.00 0.00 6.13
443 457 1.535437 CGGTACTGATAGGTTGTCGGC 60.535 57.143 0.00 0.00 0.00 5.54
444 458 1.747355 ACGGTACTGATAGGTTGTCGG 59.253 52.381 9.17 0.00 0.00 4.79
445 459 3.547613 GCTACGGTACTGATAGGTTGTCG 60.548 52.174 9.17 0.00 0.00 4.35
446 460 3.243334 GGCTACGGTACTGATAGGTTGTC 60.243 52.174 9.17 0.00 0.00 3.18
447 461 2.692041 GGCTACGGTACTGATAGGTTGT 59.308 50.000 9.17 0.00 0.00 3.32
448 462 2.035576 GGGCTACGGTACTGATAGGTTG 59.964 54.545 9.17 0.00 0.00 3.77
449 463 2.091444 AGGGCTACGGTACTGATAGGTT 60.091 50.000 9.17 0.00 0.00 3.50
450 464 1.498145 AGGGCTACGGTACTGATAGGT 59.502 52.381 9.17 0.00 0.00 3.08
454 468 1.342674 TGGAAGGGCTACGGTACTGAT 60.343 52.381 9.17 0.00 0.00 2.90
456 470 0.899720 TTGGAAGGGCTACGGTACTG 59.100 55.000 0.00 0.00 0.00 2.74
457 471 1.648116 TTTGGAAGGGCTACGGTACT 58.352 50.000 0.00 0.00 0.00 2.73
458 472 2.704464 ATTTGGAAGGGCTACGGTAC 57.296 50.000 0.00 0.00 0.00 3.34
459 473 2.435437 GGTATTTGGAAGGGCTACGGTA 59.565 50.000 0.00 0.00 0.00 4.02
461 475 1.476291 GGGTATTTGGAAGGGCTACGG 60.476 57.143 0.00 0.00 0.00 4.02
462 476 1.476291 GGGGTATTTGGAAGGGCTACG 60.476 57.143 0.00 0.00 0.00 3.51
463 477 1.567175 TGGGGTATTTGGAAGGGCTAC 59.433 52.381 0.00 0.00 0.00 3.58
464 478 1.567175 GTGGGGTATTTGGAAGGGCTA 59.433 52.381 0.00 0.00 0.00 3.93
465 479 0.335019 GTGGGGTATTTGGAAGGGCT 59.665 55.000 0.00 0.00 0.00 5.19
466 480 0.686441 GGTGGGGTATTTGGAAGGGC 60.686 60.000 0.00 0.00 0.00 5.19
467 481 0.395173 CGGTGGGGTATTTGGAAGGG 60.395 60.000 0.00 0.00 0.00 3.95
468 482 0.621609 TCGGTGGGGTATTTGGAAGG 59.378 55.000 0.00 0.00 0.00 3.46
469 483 2.092646 TCATCGGTGGGGTATTTGGAAG 60.093 50.000 0.00 0.00 0.00 3.46
470 484 1.916874 TCATCGGTGGGGTATTTGGAA 59.083 47.619 0.00 0.00 0.00 3.53
471 485 1.585895 TCATCGGTGGGGTATTTGGA 58.414 50.000 0.00 0.00 0.00 3.53
472 486 2.297701 CTTCATCGGTGGGGTATTTGG 58.702 52.381 0.00 0.00 0.00 3.28
473 487 1.676006 GCTTCATCGGTGGGGTATTTG 59.324 52.381 0.00 0.00 0.00 2.32
474 488 1.564348 AGCTTCATCGGTGGGGTATTT 59.436 47.619 0.00 0.00 0.00 1.40
475 489 1.213296 AGCTTCATCGGTGGGGTATT 58.787 50.000 0.00 0.00 0.00 1.89
476 490 1.213296 AAGCTTCATCGGTGGGGTAT 58.787 50.000 0.00 0.00 0.00 2.73
477 491 1.760613 CTAAGCTTCATCGGTGGGGTA 59.239 52.381 0.00 0.00 0.00 3.69
478 492 0.541863 CTAAGCTTCATCGGTGGGGT 59.458 55.000 0.00 0.00 0.00 4.95
479 493 0.179045 CCTAAGCTTCATCGGTGGGG 60.179 60.000 0.00 0.00 0.00 4.96
480 494 0.830648 TCCTAAGCTTCATCGGTGGG 59.169 55.000 0.00 0.00 0.00 4.61
481 495 1.473434 GGTCCTAAGCTTCATCGGTGG 60.473 57.143 0.00 0.00 0.00 4.61
482 496 1.473434 GGGTCCTAAGCTTCATCGGTG 60.473 57.143 0.00 0.00 0.00 4.94
483 497 0.831307 GGGTCCTAAGCTTCATCGGT 59.169 55.000 0.00 0.00 0.00 4.69
484 498 1.069358 GAGGGTCCTAAGCTTCATCGG 59.931 57.143 0.00 0.00 0.00 4.18
485 499 1.269309 CGAGGGTCCTAAGCTTCATCG 60.269 57.143 0.00 3.19 0.00 3.84
486 500 1.539280 GCGAGGGTCCTAAGCTTCATC 60.539 57.143 0.00 0.00 0.00 2.92
487 501 0.466124 GCGAGGGTCCTAAGCTTCAT 59.534 55.000 0.00 0.00 0.00 2.57
488 502 0.614979 AGCGAGGGTCCTAAGCTTCA 60.615 55.000 0.00 0.00 36.99 3.02
489 503 0.179097 CAGCGAGGGTCCTAAGCTTC 60.179 60.000 0.00 0.00 37.80 3.86
490 504 1.901085 CAGCGAGGGTCCTAAGCTT 59.099 57.895 14.15 3.48 37.80 3.74
491 505 2.726351 GCAGCGAGGGTCCTAAGCT 61.726 63.158 11.89 11.89 39.52 3.74
492 506 2.202946 GCAGCGAGGGTCCTAAGC 60.203 66.667 8.34 8.34 0.00 3.09
493 507 0.249657 GATGCAGCGAGGGTCCTAAG 60.250 60.000 0.00 0.00 0.00 2.18
494 508 0.975556 TGATGCAGCGAGGGTCCTAA 60.976 55.000 0.00 0.00 0.00 2.69
495 509 0.760567 ATGATGCAGCGAGGGTCCTA 60.761 55.000 0.00 0.00 0.00 2.94
496 510 2.037620 GATGATGCAGCGAGGGTCCT 62.038 60.000 0.00 0.00 0.00 3.85
497 511 1.596477 GATGATGCAGCGAGGGTCC 60.596 63.158 0.00 0.00 0.00 4.46
498 512 0.599728 GAGATGATGCAGCGAGGGTC 60.600 60.000 0.00 0.00 0.00 4.46
499 513 1.445095 GAGATGATGCAGCGAGGGT 59.555 57.895 0.00 0.00 0.00 4.34
500 514 1.301558 GGAGATGATGCAGCGAGGG 60.302 63.158 0.00 0.00 0.00 4.30
501 515 0.964700 TAGGAGATGATGCAGCGAGG 59.035 55.000 0.00 0.00 0.00 4.63
502 516 1.612950 ACTAGGAGATGATGCAGCGAG 59.387 52.381 0.00 0.00 0.00 5.03
503 517 1.697284 ACTAGGAGATGATGCAGCGA 58.303 50.000 0.00 0.00 0.00 4.93
504 518 2.522836 AACTAGGAGATGATGCAGCG 57.477 50.000 0.00 0.00 0.00 5.18
505 519 3.314635 CCAAAACTAGGAGATGATGCAGC 59.685 47.826 0.00 0.00 0.00 5.25
506 520 3.314635 GCCAAAACTAGGAGATGATGCAG 59.685 47.826 0.00 0.00 0.00 4.41
507 521 3.054139 AGCCAAAACTAGGAGATGATGCA 60.054 43.478 0.00 0.00 0.00 3.96
508 522 3.314635 CAGCCAAAACTAGGAGATGATGC 59.685 47.826 0.00 0.00 0.00 3.91
509 523 3.881688 CCAGCCAAAACTAGGAGATGATG 59.118 47.826 0.00 0.00 0.00 3.07
510 524 3.686691 GCCAGCCAAAACTAGGAGATGAT 60.687 47.826 0.00 0.00 0.00 2.45
511 525 2.356125 GCCAGCCAAAACTAGGAGATGA 60.356 50.000 0.00 0.00 0.00 2.92
512 526 2.019984 GCCAGCCAAAACTAGGAGATG 58.980 52.381 0.00 0.00 0.00 2.90
513 527 1.635487 TGCCAGCCAAAACTAGGAGAT 59.365 47.619 0.00 0.00 0.00 2.75
514 528 1.064003 TGCCAGCCAAAACTAGGAGA 58.936 50.000 0.00 0.00 0.00 3.71
515 529 2.134789 ATGCCAGCCAAAACTAGGAG 57.865 50.000 0.00 0.00 0.00 3.69
516 530 3.245087 TGTTATGCCAGCCAAAACTAGGA 60.245 43.478 0.00 0.00 0.00 2.94
517 531 3.088532 TGTTATGCCAGCCAAAACTAGG 58.911 45.455 0.00 0.00 0.00 3.02
518 532 3.505680 TGTGTTATGCCAGCCAAAACTAG 59.494 43.478 0.00 0.00 0.00 2.57
519 533 3.491342 TGTGTTATGCCAGCCAAAACTA 58.509 40.909 0.00 0.00 0.00 2.24
520 534 2.315176 TGTGTTATGCCAGCCAAAACT 58.685 42.857 0.00 0.00 0.00 2.66
521 535 2.810439 TGTGTTATGCCAGCCAAAAC 57.190 45.000 0.00 0.00 0.00 2.43
522 536 2.632028 ACATGTGTTATGCCAGCCAAAA 59.368 40.909 0.00 0.00 0.00 2.44
523 537 2.246469 ACATGTGTTATGCCAGCCAAA 58.754 42.857 0.00 0.00 0.00 3.28
524 538 1.921982 ACATGTGTTATGCCAGCCAA 58.078 45.000 0.00 0.00 0.00 4.52
525 539 2.797177 TACATGTGTTATGCCAGCCA 57.203 45.000 9.11 0.00 0.00 4.75
526 540 3.502211 GGTATACATGTGTTATGCCAGCC 59.498 47.826 9.11 0.00 0.00 4.85
527 541 3.186409 CGGTATACATGTGTTATGCCAGC 59.814 47.826 9.11 0.00 0.00 4.85
528 542 3.186409 GCGGTATACATGTGTTATGCCAG 59.814 47.826 9.11 5.38 0.00 4.85
529 543 3.135225 GCGGTATACATGTGTTATGCCA 58.865 45.455 9.11 0.00 0.00 4.92
530 544 3.135225 TGCGGTATACATGTGTTATGCC 58.865 45.455 9.11 6.38 0.00 4.40
531 545 3.363970 GCTGCGGTATACATGTGTTATGC 60.364 47.826 9.11 7.87 0.00 3.14
532 546 3.807071 TGCTGCGGTATACATGTGTTATG 59.193 43.478 9.11 0.00 0.00 1.90
533 547 4.066646 TGCTGCGGTATACATGTGTTAT 57.933 40.909 9.11 0.00 0.00 1.89
534 548 3.528597 TGCTGCGGTATACATGTGTTA 57.471 42.857 9.11 0.00 0.00 2.41
535 549 2.394930 TGCTGCGGTATACATGTGTT 57.605 45.000 9.11 0.00 0.00 3.32
536 550 2.394930 TTGCTGCGGTATACATGTGT 57.605 45.000 9.11 4.04 0.00 3.72
537 551 3.373748 TCTTTTGCTGCGGTATACATGTG 59.626 43.478 9.11 0.00 0.00 3.21
538 552 3.374058 GTCTTTTGCTGCGGTATACATGT 59.626 43.478 2.69 2.69 0.00 3.21
539 553 3.544048 CGTCTTTTGCTGCGGTATACATG 60.544 47.826 5.01 0.00 0.00 3.21
540 554 2.607635 CGTCTTTTGCTGCGGTATACAT 59.392 45.455 5.01 0.00 0.00 2.29
541 555 1.996898 CGTCTTTTGCTGCGGTATACA 59.003 47.619 5.01 0.00 0.00 2.29
542 556 2.264813 TCGTCTTTTGCTGCGGTATAC 58.735 47.619 0.00 0.00 0.00 1.47
543 557 2.536365 CTCGTCTTTTGCTGCGGTATA 58.464 47.619 0.00 0.00 0.00 1.47
544 558 1.359848 CTCGTCTTTTGCTGCGGTAT 58.640 50.000 0.00 0.00 0.00 2.73
545 559 0.669318 CCTCGTCTTTTGCTGCGGTA 60.669 55.000 0.00 0.00 0.00 4.02
546 560 1.961277 CCTCGTCTTTTGCTGCGGT 60.961 57.895 0.00 0.00 0.00 5.68
547 561 1.021390 ATCCTCGTCTTTTGCTGCGG 61.021 55.000 0.00 0.00 0.00 5.69
548 562 0.371645 GATCCTCGTCTTTTGCTGCG 59.628 55.000 0.00 0.00 0.00 5.18
549 563 1.129437 GTGATCCTCGTCTTTTGCTGC 59.871 52.381 0.00 0.00 0.00 5.25
550 564 2.693069 AGTGATCCTCGTCTTTTGCTG 58.307 47.619 0.00 0.00 0.00 4.41
551 565 3.409026 AAGTGATCCTCGTCTTTTGCT 57.591 42.857 0.00 0.00 0.00 3.91
552 566 4.489679 AAAAGTGATCCTCGTCTTTTGC 57.510 40.909 0.00 0.00 38.25 3.68
571 585 2.158325 AGTTGCTCCCTGATCCCAAAAA 60.158 45.455 0.00 0.00 0.00 1.94
572 586 1.428912 AGTTGCTCCCTGATCCCAAAA 59.571 47.619 0.00 0.00 0.00 2.44
573 587 1.004745 GAGTTGCTCCCTGATCCCAAA 59.995 52.381 0.00 0.00 0.00 3.28
574 588 0.620556 GAGTTGCTCCCTGATCCCAA 59.379 55.000 0.00 0.00 0.00 4.12
575 589 1.274703 GGAGTTGCTCCCTGATCCCA 61.275 60.000 3.89 0.00 44.36 4.37
576 590 1.529309 GGAGTTGCTCCCTGATCCC 59.471 63.158 3.89 0.00 44.36 3.85
585 599 1.079750 GACGAGGGTGGAGTTGCTC 60.080 63.158 0.00 0.00 0.00 4.26
586 600 2.932234 CGACGAGGGTGGAGTTGCT 61.932 63.158 0.00 0.00 0.00 3.91
587 601 2.432628 CGACGAGGGTGGAGTTGC 60.433 66.667 0.00 0.00 0.00 4.17
588 602 1.812686 TTCCGACGAGGGTGGAGTTG 61.813 60.000 0.00 0.00 41.52 3.16
589 603 1.532316 TTCCGACGAGGGTGGAGTT 60.532 57.895 0.00 0.00 41.52 3.01
590 604 1.977544 CTTCCGACGAGGGTGGAGT 60.978 63.158 0.00 0.00 41.52 3.85
591 605 2.885861 CTTCCGACGAGGGTGGAG 59.114 66.667 0.00 0.00 41.52 3.86
592 606 2.488771 TAGCTTCCGACGAGGGTGGA 62.489 60.000 0.00 0.00 41.52 4.02
593 607 2.005960 CTAGCTTCCGACGAGGGTGG 62.006 65.000 0.00 0.00 41.52 4.61
594 608 1.433879 CTAGCTTCCGACGAGGGTG 59.566 63.158 0.00 0.00 41.52 4.61
595 609 1.753463 CCTAGCTTCCGACGAGGGT 60.753 63.158 0.00 0.00 41.52 4.34
596 610 0.824182 ATCCTAGCTTCCGACGAGGG 60.824 60.000 0.00 0.00 41.52 4.30
597 611 0.594110 GATCCTAGCTTCCGACGAGG 59.406 60.000 0.00 0.00 42.97 4.63
598 612 0.594110 GGATCCTAGCTTCCGACGAG 59.406 60.000 3.84 0.00 0.00 4.18
599 613 0.106868 TGGATCCTAGCTTCCGACGA 60.107 55.000 14.23 0.00 34.58 4.20
600 614 0.312416 CTGGATCCTAGCTTCCGACG 59.688 60.000 14.23 0.00 34.58 5.12
601 615 0.032815 GCTGGATCCTAGCTTCCGAC 59.967 60.000 21.85 0.00 38.14 4.79
602 616 0.397114 TGCTGGATCCTAGCTTCCGA 60.397 55.000 26.29 11.29 41.66 4.55
603 617 0.465705 TTGCTGGATCCTAGCTTCCG 59.534 55.000 26.29 4.81 41.66 4.30
604 618 1.202746 CCTTGCTGGATCCTAGCTTCC 60.203 57.143 26.29 0.00 41.66 3.46
605 619 1.813477 GCCTTGCTGGATCCTAGCTTC 60.813 57.143 26.29 14.54 41.66 3.86
606 620 0.182299 GCCTTGCTGGATCCTAGCTT 59.818 55.000 26.29 0.00 41.66 3.74
607 621 0.984961 TGCCTTGCTGGATCCTAGCT 60.985 55.000 26.29 0.00 41.66 3.32
608 622 0.107017 TTGCCTTGCTGGATCCTAGC 60.107 55.000 22.16 22.16 41.49 3.42
609 623 2.295885 CTTTGCCTTGCTGGATCCTAG 58.704 52.381 14.23 9.87 38.35 3.02
610 624 1.683011 GCTTTGCCTTGCTGGATCCTA 60.683 52.381 14.23 0.00 38.35 2.94
611 625 0.969409 GCTTTGCCTTGCTGGATCCT 60.969 55.000 14.23 0.00 38.35 3.24
612 626 1.252904 TGCTTTGCCTTGCTGGATCC 61.253 55.000 4.20 4.20 38.35 3.36
613 627 0.604578 TTGCTTTGCCTTGCTGGATC 59.395 50.000 0.49 0.00 38.35 3.36
614 628 0.319405 GTTGCTTTGCCTTGCTGGAT 59.681 50.000 0.49 0.00 38.35 3.41
615 629 1.741525 GTTGCTTTGCCTTGCTGGA 59.258 52.632 0.49 0.00 38.35 3.86
616 630 1.662446 CGTTGCTTTGCCTTGCTGG 60.662 57.895 0.00 0.00 39.35 4.85
617 631 0.528249 AACGTTGCTTTGCCTTGCTG 60.528 50.000 0.00 0.00 0.00 4.41
618 632 1.028905 TAACGTTGCTTTGCCTTGCT 58.971 45.000 11.99 0.00 0.00 3.91
619 633 1.846541 TTAACGTTGCTTTGCCTTGC 58.153 45.000 11.99 0.00 0.00 4.01
620 634 3.614616 TGTTTTAACGTTGCTTTGCCTTG 59.385 39.130 11.99 0.00 0.00 3.61
621 635 3.851098 TGTTTTAACGTTGCTTTGCCTT 58.149 36.364 11.99 0.00 0.00 4.35
622 636 3.512033 TGTTTTAACGTTGCTTTGCCT 57.488 38.095 11.99 0.00 0.00 4.75
623 637 3.603629 GCATGTTTTAACGTTGCTTTGCC 60.604 43.478 11.99 0.00 37.55 4.52
624 638 3.531015 GCATGTTTTAACGTTGCTTTGC 58.469 40.909 11.99 8.79 37.55 3.68
625 639 3.361531 CCGCATGTTTTAACGTTGCTTTG 60.362 43.478 11.99 2.50 38.05 2.77
626 640 2.792116 CCGCATGTTTTAACGTTGCTTT 59.208 40.909 11.99 0.00 38.05 3.51
627 641 2.389998 CCGCATGTTTTAACGTTGCTT 58.610 42.857 11.99 0.00 38.05 3.91
628 642 1.928595 GCCGCATGTTTTAACGTTGCT 60.929 47.619 11.99 0.00 38.05 3.91
629 643 0.433115 GCCGCATGTTTTAACGTTGC 59.567 50.000 11.99 3.25 37.33 4.17
630 644 1.713404 CAGCCGCATGTTTTAACGTTG 59.287 47.619 11.99 0.00 0.00 4.10
631 645 1.928595 GCAGCCGCATGTTTTAACGTT 60.929 47.619 5.88 5.88 38.36 3.99
632 646 0.386731 GCAGCCGCATGTTTTAACGT 60.387 50.000 0.00 0.00 38.36 3.99
633 647 0.109781 AGCAGCCGCATGTTTTAACG 60.110 50.000 0.00 0.00 42.27 3.18
634 648 1.068610 TCAGCAGCCGCATGTTTTAAC 60.069 47.619 0.00 0.00 42.27 2.01
635 649 1.242989 TCAGCAGCCGCATGTTTTAA 58.757 45.000 0.00 0.00 42.27 1.52
636 650 1.242989 TTCAGCAGCCGCATGTTTTA 58.757 45.000 0.00 0.00 42.27 1.52
637 651 0.604578 ATTCAGCAGCCGCATGTTTT 59.395 45.000 0.00 0.00 42.27 2.43
638 652 0.171903 GATTCAGCAGCCGCATGTTT 59.828 50.000 0.00 0.00 42.27 2.83
639 653 0.679002 AGATTCAGCAGCCGCATGTT 60.679 50.000 0.00 0.00 42.27 2.71
640 654 0.679002 AAGATTCAGCAGCCGCATGT 60.679 50.000 0.00 0.00 42.27 3.21
641 655 0.029035 GAAGATTCAGCAGCCGCATG 59.971 55.000 0.00 0.00 42.27 4.06
642 656 1.099879 GGAAGATTCAGCAGCCGCAT 61.100 55.000 0.00 0.00 42.27 4.73
643 657 1.746615 GGAAGATTCAGCAGCCGCA 60.747 57.895 0.00 0.00 42.27 5.69
644 658 2.476320 GGGAAGATTCAGCAGCCGC 61.476 63.158 0.00 0.00 38.99 6.53
645 659 1.078214 TGGGAAGATTCAGCAGCCG 60.078 57.895 0.00 0.00 0.00 5.52
646 660 0.322816 TGTGGGAAGATTCAGCAGCC 60.323 55.000 0.00 0.00 0.00 4.85
647 661 0.807496 GTGTGGGAAGATTCAGCAGC 59.193 55.000 0.00 0.00 0.00 5.25
648 662 1.081892 CGTGTGGGAAGATTCAGCAG 58.918 55.000 0.00 0.00 0.00 4.24
649 663 0.955428 GCGTGTGGGAAGATTCAGCA 60.955 55.000 0.00 0.00 0.00 4.41
650 664 1.648467 GGCGTGTGGGAAGATTCAGC 61.648 60.000 0.00 0.00 0.00 4.26
651 665 1.026718 GGGCGTGTGGGAAGATTCAG 61.027 60.000 0.00 0.00 0.00 3.02
652 666 1.002624 GGGCGTGTGGGAAGATTCA 60.003 57.895 0.00 0.00 0.00 2.57
653 667 1.749258 GGGGCGTGTGGGAAGATTC 60.749 63.158 0.00 0.00 0.00 2.52
654 668 2.355115 GGGGCGTGTGGGAAGATT 59.645 61.111 0.00 0.00 0.00 2.40
655 669 3.728373 GGGGGCGTGTGGGAAGAT 61.728 66.667 0.00 0.00 0.00 2.40
656 670 4.974438 AGGGGGCGTGTGGGAAGA 62.974 66.667 0.00 0.00 0.00 2.87
657 671 4.410400 GAGGGGGCGTGTGGGAAG 62.410 72.222 0.00 0.00 0.00 3.46
667 681 4.129148 GATGGTGGTGGAGGGGGC 62.129 72.222 0.00 0.00 0.00 5.80
668 682 3.797353 CGATGGTGGTGGAGGGGG 61.797 72.222 0.00 0.00 0.00 5.40
669 683 3.009115 ACGATGGTGGTGGAGGGG 61.009 66.667 0.00 0.00 0.00 4.79
670 684 2.268920 CACGATGGTGGTGGAGGG 59.731 66.667 0.00 0.00 40.58 4.30
671 685 1.079127 GTCACGATGGTGGTGGAGG 60.079 63.158 8.09 0.00 44.50 4.30
672 686 1.135139 CTAGTCACGATGGTGGTGGAG 59.865 57.143 8.09 0.00 44.50 3.86
673 687 1.182667 CTAGTCACGATGGTGGTGGA 58.817 55.000 8.09 0.00 44.50 4.02
674 688 0.460284 GCTAGTCACGATGGTGGTGG 60.460 60.000 8.09 0.00 44.50 4.61
675 689 0.246360 TGCTAGTCACGATGGTGGTG 59.754 55.000 8.09 0.00 44.50 4.17
676 690 1.137086 GATGCTAGTCACGATGGTGGT 59.863 52.381 8.09 0.00 44.50 4.16
677 691 1.858091 GATGCTAGTCACGATGGTGG 58.142 55.000 8.09 0.00 44.50 4.61
678 692 1.065551 TCGATGCTAGTCACGATGGTG 59.934 52.381 0.67 0.67 45.78 4.17
679 693 1.065701 GTCGATGCTAGTCACGATGGT 59.934 52.381 9.52 0.00 37.14 3.55
680 694 1.759994 GTCGATGCTAGTCACGATGG 58.240 55.000 9.52 0.00 37.14 3.51
681 695 1.268083 ACGTCGATGCTAGTCACGATG 60.268 52.381 17.87 17.87 44.04 3.84
682 696 1.015109 ACGTCGATGCTAGTCACGAT 58.985 50.000 4.06 0.00 37.14 3.73
683 697 0.096454 CACGTCGATGCTAGTCACGA 59.904 55.000 4.06 7.41 34.55 4.35
684 698 1.464429 GCACGTCGATGCTAGTCACG 61.464 60.000 4.06 0.00 42.62 4.35
685 699 1.464429 CGCACGTCGATGCTAGTCAC 61.464 60.000 4.06 0.00 43.80 3.67
686 700 1.226295 CGCACGTCGATGCTAGTCA 60.226 57.895 4.06 0.00 43.80 3.41
687 701 2.568912 GCGCACGTCGATGCTAGTC 61.569 63.158 0.30 0.00 43.80 2.59
715 729 3.803715 GCTAGTTCCAGAACAAGCTCACA 60.804 47.826 12.76 0.00 43.47 3.58
717 731 2.634940 AGCTAGTTCCAGAACAAGCTCA 59.365 45.455 12.76 0.00 43.47 4.26
792 807 2.227968 GACGTTGTGTGGCGAGATGC 62.228 60.000 0.00 0.00 45.38 3.91
796 811 1.424403 TTATGACGTTGTGTGGCGAG 58.576 50.000 0.00 0.00 0.00 5.03
817 832 1.621317 TCATACGTGCTGGTCTTTGGA 59.379 47.619 0.00 0.00 0.00 3.53
837 852 3.074412 CCTTAGTGTTGATTGTCGGCTT 58.926 45.455 0.00 0.00 0.00 4.35
838 853 2.699954 CCTTAGTGTTGATTGTCGGCT 58.300 47.619 0.00 0.00 0.00 5.52
839 854 1.130561 GCCTTAGTGTTGATTGTCGGC 59.869 52.381 0.00 0.00 0.00 5.54
840 855 1.737793 GGCCTTAGTGTTGATTGTCGG 59.262 52.381 0.00 0.00 0.00 4.79
841 856 1.737793 GGGCCTTAGTGTTGATTGTCG 59.262 52.381 0.84 0.00 0.00 4.35
842 857 2.790433 TGGGCCTTAGTGTTGATTGTC 58.210 47.619 4.53 0.00 0.00 3.18
843 858 2.969821 TGGGCCTTAGTGTTGATTGT 57.030 45.000 4.53 0.00 0.00 2.71
844 859 3.573967 AGTTTGGGCCTTAGTGTTGATTG 59.426 43.478 4.53 0.00 0.00 2.67
845 860 3.844640 AGTTTGGGCCTTAGTGTTGATT 58.155 40.909 4.53 0.00 0.00 2.57
846 861 3.525800 AGTTTGGGCCTTAGTGTTGAT 57.474 42.857 4.53 0.00 0.00 2.57
847 862 4.440826 TTAGTTTGGGCCTTAGTGTTGA 57.559 40.909 4.53 0.00 0.00 3.18
848 863 5.010617 ACAATTAGTTTGGGCCTTAGTGTTG 59.989 40.000 4.53 4.90 39.80 3.33
849 864 5.144832 ACAATTAGTTTGGGCCTTAGTGTT 58.855 37.500 4.53 0.00 39.80 3.32
850 865 4.736473 ACAATTAGTTTGGGCCTTAGTGT 58.264 39.130 4.53 0.00 39.80 3.55
851 866 5.124936 GGTACAATTAGTTTGGGCCTTAGTG 59.875 44.000 4.53 0.00 39.80 2.74
852 867 5.222171 TGGTACAATTAGTTTGGGCCTTAGT 60.222 40.000 4.53 0.00 39.80 2.24
853 868 5.124936 GTGGTACAATTAGTTTGGGCCTTAG 59.875 44.000 4.53 0.00 44.16 2.18
854 869 5.011586 GTGGTACAATTAGTTTGGGCCTTA 58.988 41.667 4.53 0.00 44.16 2.69
869 884 5.216614 TGCACATAGTAAGTGTGGTACAA 57.783 39.130 7.32 0.00 45.39 2.41
878 893 5.186198 GGGATGTTCTTGCACATAGTAAGT 58.814 41.667 0.00 0.00 40.40 2.24
880 895 4.081365 TCGGGATGTTCTTGCACATAGTAA 60.081 41.667 0.00 0.00 37.52 2.24
883 898 2.868583 CTCGGGATGTTCTTGCACATAG 59.131 50.000 0.00 0.00 37.52 2.23
900 915 3.157949 GAGGGAAGGGGAGCTCGG 61.158 72.222 7.83 0.00 0.00 4.63
904 919 3.157949 CGAGGAGGGAAGGGGAGC 61.158 72.222 0.00 0.00 0.00 4.70
939 954 4.803908 CTTTGCCCCTCCTCCGGC 62.804 72.222 0.00 0.00 45.92 6.13
940 955 3.009115 TCTTTGCCCCTCCTCCGG 61.009 66.667 0.00 0.00 0.00 5.14
941 956 2.269241 GTCTTTGCCCCTCCTCCG 59.731 66.667 0.00 0.00 0.00 4.63
942 957 2.245438 CTCGTCTTTGCCCCTCCTCC 62.245 65.000 0.00 0.00 0.00 4.30
943 958 1.219393 CTCGTCTTTGCCCCTCCTC 59.781 63.158 0.00 0.00 0.00 3.71
944 959 2.960688 GCTCGTCTTTGCCCCTCCT 61.961 63.158 0.00 0.00 0.00 3.69
952 967 2.125512 CTCCCCGGCTCGTCTTTG 60.126 66.667 0.00 0.00 0.00 2.77
960 975 2.042435 CTCTCCTTCTCCCCGGCT 60.042 66.667 0.00 0.00 0.00 5.52
969 984 1.074850 CCCCTCCCCTCTCTCCTTC 60.075 68.421 0.00 0.00 0.00 3.46
1040 1064 1.807886 CGGGAGGAAGACGTACCTG 59.192 63.158 12.13 0.73 36.57 4.00
1041 1065 4.333417 CGGGAGGAAGACGTACCT 57.667 61.111 7.93 7.93 39.41 3.08
1056 1144 1.134491 AGAGAAAATACGCCTTCCCGG 60.134 52.381 0.00 0.00 0.00 5.73
1191 1281 3.399181 GGGTGATGCGGTGGAGGA 61.399 66.667 0.00 0.00 0.00 3.71
1235 1337 4.154347 GAGTGGCTGGGCTCGAGG 62.154 72.222 15.58 0.00 0.00 4.63
1237 1339 3.695606 GTGAGTGGCTGGGCTCGA 61.696 66.667 0.00 0.00 34.67 4.04
1316 1418 4.939368 TTGGTTCCGGTGGTGGCG 62.939 66.667 0.00 0.00 0.00 5.69
1317 1419 1.906333 ATTTGGTTCCGGTGGTGGC 60.906 57.895 0.00 0.00 0.00 5.01
1318 1420 1.963679 CATTTGGTTCCGGTGGTGG 59.036 57.895 0.00 0.00 0.00 4.61
1319 1421 1.288752 GCATTTGGTTCCGGTGGTG 59.711 57.895 0.00 0.00 0.00 4.17
1320 1422 1.906333 GGCATTTGGTTCCGGTGGT 60.906 57.895 0.00 0.00 0.00 4.16
1321 1423 1.595093 GAGGCATTTGGTTCCGGTGG 61.595 60.000 0.00 0.00 0.00 4.61
1322 1424 1.883021 GAGGCATTTGGTTCCGGTG 59.117 57.895 0.00 0.00 0.00 4.94
1323 1425 1.674322 CGAGGCATTTGGTTCCGGT 60.674 57.895 0.00 0.00 0.00 5.28
1324 1426 2.406616 CCGAGGCATTTGGTTCCGG 61.407 63.158 0.00 0.00 0.00 5.14
1325 1427 3.051392 GCCGAGGCATTTGGTTCCG 62.051 63.158 9.58 0.00 41.49 4.30
1326 1428 2.710902 GGCCGAGGCATTTGGTTCC 61.711 63.158 16.65 0.00 44.11 3.62
1327 1429 2.885113 GGCCGAGGCATTTGGTTC 59.115 61.111 16.65 0.00 44.11 3.62
1328 1430 3.061848 CGGCCGAGGCATTTGGTT 61.062 61.111 24.07 0.00 44.11 3.67
1914 2196 1.067425 TCGTCGTCAATGAAATCCGGT 60.067 47.619 0.00 0.00 0.00 5.28
2115 2397 2.649034 GCGTCGACCCAGAAGACA 59.351 61.111 10.58 0.00 34.80 3.41
2271 2553 1.738350 CAGGTCTCGTCGTACATGAGT 59.262 52.381 0.00 0.00 39.04 3.41
2565 2852 3.012560 GCTGACCATAGCATCCCAC 57.987 57.895 0.00 0.00 43.17 4.61
2578 2865 0.985549 CGAAGCTCGTACTTGCTGAC 59.014 55.000 9.66 7.09 39.71 3.51
2611 2898 2.064762 CTTCTCGAACAACCTCTGCAG 58.935 52.381 7.63 7.63 0.00 4.41
2629 2916 2.863809 CCTAGCCCACTTGTGTTTCTT 58.136 47.619 0.00 0.00 0.00 2.52
2830 4287 3.565764 TTTGAGGTAGGGCATCATCAG 57.434 47.619 0.00 0.00 37.76 2.90
2862 4319 1.284982 CGGAAGCCTGTGTCAGAACG 61.285 60.000 0.00 0.00 32.44 3.95
2883 4340 4.401202 TGAAAGATCACGCTGGTATAGACA 59.599 41.667 0.00 0.00 0.00 3.41
2958 4415 1.970917 GACACGGGCTGCTTTCATCG 61.971 60.000 0.00 0.00 0.00 3.84
2968 4425 1.248785 ACATACTCACGACACGGGCT 61.249 55.000 0.00 0.00 0.00 5.19
3055 4513 2.434884 CTTCCCGCACGAGCATGT 60.435 61.111 5.50 0.00 42.27 3.21
3080 4538 2.594303 TGCACAGGAAGCCAACCG 60.594 61.111 0.00 0.00 0.00 4.44
3156 4614 2.418368 ATTTGGTCCAGCGCTTCATA 57.582 45.000 7.50 0.00 0.00 2.15
3198 4656 2.361737 GCTTGCCCCAGAACCTCC 60.362 66.667 0.00 0.00 0.00 4.30
3207 4677 4.056125 GCTTGAACGGCTTGCCCC 62.056 66.667 6.02 0.00 0.00 5.80
3262 4735 2.643551 CCTAACATACTTGGGGCACAG 58.356 52.381 0.00 0.00 0.00 3.66
3405 5070 2.998670 CTGAACATCAGGCTGTAGTGTG 59.001 50.000 15.27 9.25 40.71 3.82
3481 5146 0.244721 GCCCTGCTTGAAATGTCCAC 59.755 55.000 0.00 0.00 0.00 4.02
3489 5154 2.987547 GCTGCTGCCCTGCTTGAA 60.988 61.111 3.85 0.00 35.71 2.69
3600 5265 0.321671 GCACTACTGCAGGTTCCTCA 59.678 55.000 19.93 0.00 43.62 3.86
3674 5339 6.521151 ACCTCAATGAAGAAAATAGCAAGG 57.479 37.500 0.00 0.00 0.00 3.61
3780 5456 6.922247 TGCATTTGGCCAATAAATGTTATG 57.078 33.333 21.26 17.56 43.80 1.90
3918 5698 4.776743 CAAACTCTACTGTTGCATGTCAC 58.223 43.478 0.00 0.00 0.00 3.67
3925 5705 7.752695 AGTAATAATGCAAACTCTACTGTTGC 58.247 34.615 0.00 0.76 0.00 4.17
3972 5755 2.829043 TACACTCACGTGATGCCCGC 62.829 60.000 20.40 0.00 43.97 6.13
3973 5756 0.389296 TTACACTCACGTGATGCCCG 60.389 55.000 20.40 9.54 43.97 6.13
3975 5758 4.419522 AATTTTACACTCACGTGATGCC 57.580 40.909 20.40 0.00 43.97 4.40
4027 5810 5.537188 TGGCACACCTAATTTTCATCAAAC 58.463 37.500 0.00 0.00 36.63 2.93
4028 5811 5.279406 CCTGGCACACCTAATTTTCATCAAA 60.279 40.000 0.00 0.00 36.63 2.69
4047 5830 3.847671 ACTAAGATTCTTAGGCCTGGC 57.152 47.619 28.50 11.05 0.00 4.85
4064 5847 9.855021 GAAATAAATGCAAAAGGCTAGAAACTA 57.145 29.630 0.00 0.00 45.15 2.24
4093 5876 6.326064 AGAGGCACTAACATTGAGAGTATGAT 59.674 38.462 0.00 0.00 41.55 2.45
4101 5884 4.331168 GCACTAAGAGGCACTAACATTGAG 59.669 45.833 0.00 0.00 41.55 3.02
4167 5960 3.193479 CCCATTTTGGACAAGTTAGGAGC 59.807 47.826 0.00 0.00 40.96 4.70
4176 5969 2.685106 TGGCTACCCATTTTGGACAA 57.315 45.000 0.00 0.00 40.96 3.18
4264 6065 4.929211 TGATACAACATGACCAAGAGAACG 59.071 41.667 0.00 0.00 0.00 3.95
4336 6145 1.454479 GAGTGTCCCCATGGCCATG 60.454 63.158 34.82 34.82 38.51 3.66
4337 6146 1.508667 TTGAGTGTCCCCATGGCCAT 61.509 55.000 14.09 14.09 0.00 4.40
4338 6147 2.159490 TTGAGTGTCCCCATGGCCA 61.159 57.895 8.56 8.56 0.00 5.36
4339 6148 1.678970 GTTGAGTGTCCCCATGGCC 60.679 63.158 6.09 0.00 0.00 5.36
4340 6149 0.618458 TAGTTGAGTGTCCCCATGGC 59.382 55.000 6.09 0.00 0.00 4.40
4341 6150 2.505407 TCATAGTTGAGTGTCCCCATGG 59.495 50.000 4.14 4.14 0.00 3.66
4430 6239 1.464608 CACTGGCCAGAAATGTACGTG 59.535 52.381 39.19 19.84 0.00 4.49
4803 6765 1.599542 GCGTGGACATCATAAGAAGCC 59.400 52.381 0.00 0.00 0.00 4.35
4829 6792 5.774690 TGTGGACATCATAAGAAGCCTTTTT 59.225 36.000 0.00 0.00 33.94 1.94
4865 6846 1.884579 CACCTGTGCAGCTTCTCATTT 59.115 47.619 0.00 0.00 0.00 2.32
4963 6945 5.936156 CGCACTAAAATAAATACAAAGCGC 58.064 37.500 0.00 0.00 33.84 5.92
5132 7162 8.208718 TGGGTGTATTAAGATGAAGAAAATCG 57.791 34.615 0.00 0.00 0.00 3.34
5228 7263 1.348036 AGAGTACAAACAGGAGCACCC 59.652 52.381 0.00 0.00 36.73 4.61
5229 7264 2.841442 AGAGTACAAACAGGAGCACC 57.159 50.000 0.00 0.00 0.00 5.01
5235 7288 5.169295 GCTACCAAGTAGAGTACAAACAGG 58.831 45.833 5.96 0.00 38.29 4.00
5239 7292 3.508793 AGCGCTACCAAGTAGAGTACAAA 59.491 43.478 8.99 0.00 38.29 2.83
5240 7293 3.087031 AGCGCTACCAAGTAGAGTACAA 58.913 45.455 8.99 0.00 38.29 2.41
5241 7294 2.422479 CAGCGCTACCAAGTAGAGTACA 59.578 50.000 10.99 0.00 38.29 2.90
5242 7295 2.223525 CCAGCGCTACCAAGTAGAGTAC 60.224 54.545 10.99 0.00 38.29 2.73
5243 7296 2.022195 CCAGCGCTACCAAGTAGAGTA 58.978 52.381 10.99 0.00 38.29 2.59
5244 7297 0.818296 CCAGCGCTACCAAGTAGAGT 59.182 55.000 10.99 0.00 38.29 3.24
5245 7298 0.103208 CCCAGCGCTACCAAGTAGAG 59.897 60.000 10.99 3.70 38.29 2.43
5246 7299 0.323999 TCCCAGCGCTACCAAGTAGA 60.324 55.000 10.99 0.00 38.29 2.59
5247 7300 0.179108 GTCCCAGCGCTACCAAGTAG 60.179 60.000 10.99 0.00 38.97 2.57
5248 7301 1.895238 GTCCCAGCGCTACCAAGTA 59.105 57.895 10.99 0.00 0.00 2.24
5266 7319 0.387929 ACCATCTATGCCGTACCACG 59.612 55.000 0.00 0.00 42.11 4.94
5381 7442 3.304928 CCAATGCTCAGAAGGAACACAAC 60.305 47.826 0.00 0.00 0.00 3.32
5383 7444 2.106338 TCCAATGCTCAGAAGGAACACA 59.894 45.455 0.00 0.00 0.00 3.72
5457 7519 3.670055 CACATGAAGGCATTTTCGACAAC 59.330 43.478 0.00 0.00 30.68 3.32
5579 7647 3.498018 CACAACTGAATCATCAACGGACA 59.502 43.478 0.00 0.00 34.49 4.02
5586 7654 7.991084 AAGAGATTTCACAACTGAATCATCA 57.009 32.000 0.00 0.00 36.26 3.07
5626 7694 7.134815 CGATCATATTTTCCTGTGACCAATTC 58.865 38.462 0.00 0.00 0.00 2.17
5643 7711 5.728471 CTTCTAATGTCCAGGCGATCATAT 58.272 41.667 0.00 0.00 0.00 1.78
5645 7713 3.805108 GCTTCTAATGTCCAGGCGATCAT 60.805 47.826 0.00 0.00 0.00 2.45
5653 7721 4.631377 TCACGAATTGCTTCTAATGTCCAG 59.369 41.667 0.00 0.00 0.00 3.86
5661 7729 3.860641 TCTGCATCACGAATTGCTTCTA 58.139 40.909 0.00 0.00 39.60 2.10
5683 7751 1.972872 CCGGCTGCAATCCTCTAATT 58.027 50.000 0.50 0.00 0.00 1.40
5684 7752 0.536006 GCCGGCTGCAATCCTCTAAT 60.536 55.000 22.15 0.00 40.77 1.73
5685 7753 1.153168 GCCGGCTGCAATCCTCTAA 60.153 57.895 22.15 0.00 40.77 2.10
5700 7773 0.813610 TTTATCCACCATCGCAGCCG 60.814 55.000 0.00 0.00 0.00 5.52
5710 7791 6.834168 TCCATTCAGAAAACTTTATCCACC 57.166 37.500 0.00 0.00 0.00 4.61
5719 7800 5.595952 ACTTTGCTCTTCCATTCAGAAAACT 59.404 36.000 0.00 0.00 0.00 2.66
5720 7801 5.689068 CACTTTGCTCTTCCATTCAGAAAAC 59.311 40.000 0.00 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.