Multiple sequence alignment - TraesCS7D01G541100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G541100 | chr7D | 100.000 | 3257 | 0 | 0 | 1 | 3257 | 630705677 | 630708933 | 0.000000e+00 | 6015.0 |
1 | TraesCS7D01G541100 | chr7D | 81.079 | 1427 | 146 | 57 | 406 | 1771 | 630971987 | 630973350 | 0.000000e+00 | 1026.0 |
2 | TraesCS7D01G541100 | chr7D | 80.000 | 765 | 67 | 38 | 1046 | 1757 | 631336808 | 631336077 | 1.360000e-133 | 486.0 |
3 | TraesCS7D01G541100 | chr7D | 79.700 | 601 | 61 | 23 | 406 | 954 | 631337412 | 631336821 | 8.530000e-101 | 377.0 |
4 | TraesCS7D01G541100 | chr7D | 88.722 | 133 | 12 | 2 | 1673 | 1805 | 631336082 | 631335953 | 3.360000e-35 | 159.0 |
5 | TraesCS7D01G541100 | chr7D | 89.474 | 57 | 3 | 2 | 1818 | 1874 | 630973370 | 630973423 | 5.830000e-08 | 69.4 |
6 | TraesCS7D01G541100 | chrUn | 88.069 | 1559 | 94 | 46 | 285 | 1773 | 83676020 | 83674484 | 0.000000e+00 | 1764.0 |
7 | TraesCS7D01G541100 | chrUn | 92.817 | 529 | 33 | 3 | 1807 | 2334 | 83674496 | 83673972 | 0.000000e+00 | 761.0 |
8 | TraesCS7D01G541100 | chrUn | 90.591 | 457 | 35 | 6 | 1806 | 2260 | 88621275 | 88621725 | 1.670000e-167 | 599.0 |
9 | TraesCS7D01G541100 | chrUn | 93.583 | 187 | 9 | 2 | 521 | 704 | 88614825 | 88615011 | 3.200000e-70 | 276.0 |
10 | TraesCS7D01G541100 | chrUn | 87.500 | 112 | 14 | 0 | 1662 | 1773 | 88621177 | 88621288 | 2.640000e-26 | 130.0 |
11 | TraesCS7D01G541100 | chr7A | 88.519 | 1472 | 131 | 15 | 1806 | 3257 | 726659045 | 726660498 | 0.000000e+00 | 1748.0 |
12 | TraesCS7D01G541100 | chr7A | 88.519 | 1472 | 131 | 15 | 1806 | 3257 | 726670961 | 726672414 | 0.000000e+00 | 1748.0 |
13 | TraesCS7D01G541100 | chr7A | 88.205 | 1382 | 111 | 16 | 1892 | 3256 | 726673765 | 726675111 | 0.000000e+00 | 1602.0 |
14 | TraesCS7D01G541100 | chr7A | 86.492 | 1488 | 155 | 18 | 1806 | 3256 | 726675321 | 726676799 | 0.000000e+00 | 1592.0 |
15 | TraesCS7D01G541100 | chr7A | 84.958 | 1549 | 99 | 59 | 322 | 1773 | 726657547 | 726659058 | 0.000000e+00 | 1447.0 |
16 | TraesCS7D01G541100 | chr7A | 84.958 | 1549 | 99 | 59 | 322 | 1773 | 726669463 | 726670974 | 0.000000e+00 | 1447.0 |
17 | TraesCS7D01G541100 | chr7A | 86.830 | 1344 | 82 | 36 | 504 | 1773 | 727003487 | 727002165 | 0.000000e+00 | 1413.0 |
18 | TraesCS7D01G541100 | chr7A | 83.398 | 1024 | 107 | 21 | 2286 | 3248 | 727047198 | 727046177 | 0.000000e+00 | 891.0 |
19 | TraesCS7D01G541100 | chr7A | 91.887 | 530 | 42 | 1 | 1806 | 2334 | 727002178 | 727001649 | 0.000000e+00 | 739.0 |
20 | TraesCS7D01G541100 | chr7A | 88.517 | 418 | 37 | 4 | 1877 | 2294 | 727048016 | 727047610 | 2.260000e-136 | 496.0 |
21 | TraesCS7D01G541100 | chr7A | 92.056 | 214 | 17 | 0 | 1241 | 1454 | 726661631 | 726661844 | 5.280000e-78 | 302.0 |
22 | TraesCS7D01G541100 | chr7A | 83.478 | 230 | 24 | 8 | 285 | 507 | 727003872 | 727003650 | 5.510000e-48 | 202.0 |
23 | TraesCS7D01G541100 | chr7A | 92.913 | 127 | 9 | 0 | 1892 | 2018 | 726661849 | 726661975 | 5.550000e-43 | 185.0 |
24 | TraesCS7D01G541100 | chr7A | 94.872 | 78 | 4 | 0 | 285 | 362 | 727004553 | 727004476 | 4.410000e-24 | 122.0 |
25 | TraesCS7D01G541100 | chr7A | 98.305 | 59 | 1 | 0 | 1715 | 1773 | 726675276 | 726675334 | 1.600000e-18 | 104.0 |
26 | TraesCS7D01G541100 | chr7A | 100.000 | 47 | 0 | 0 | 316 | 362 | 727004199 | 727004153 | 1.610000e-13 | 87.9 |
27 | TraesCS7D01G541100 | chr7B | 84.629 | 1132 | 101 | 33 | 446 | 1538 | 733378688 | 733377591 | 0.000000e+00 | 1059.0 |
28 | TraesCS7D01G541100 | chr7B | 89.150 | 553 | 48 | 9 | 1808 | 2353 | 733377429 | 733376882 | 0.000000e+00 | 678.0 |
29 | TraesCS7D01G541100 | chr4A | 80.000 | 175 | 31 | 4 | 2757 | 2930 | 638769108 | 638769279 | 3.410000e-25 | 126.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7D01G541100 | chr7D | 630705677 | 630708933 | 3256 | False | 6015.000000 | 6015 | 100.000000 | 1 | 3257 | 1 | chr7D.!!$F1 | 3256 |
1 | TraesCS7D01G541100 | chr7D | 630971987 | 630973423 | 1436 | False | 547.700000 | 1026 | 85.276500 | 406 | 1874 | 2 | chr7D.!!$F2 | 1468 |
2 | TraesCS7D01G541100 | chr7D | 631335953 | 631337412 | 1459 | True | 340.666667 | 486 | 82.807333 | 406 | 1805 | 3 | chr7D.!!$R1 | 1399 |
3 | TraesCS7D01G541100 | chrUn | 83673972 | 83676020 | 2048 | True | 1262.500000 | 1764 | 90.443000 | 285 | 2334 | 2 | chrUn.!!$R1 | 2049 |
4 | TraesCS7D01G541100 | chrUn | 88621177 | 88621725 | 548 | False | 364.500000 | 599 | 89.045500 | 1662 | 2260 | 2 | chrUn.!!$F2 | 598 |
5 | TraesCS7D01G541100 | chr7A | 726669463 | 726676799 | 7336 | False | 1298.600000 | 1748 | 89.295800 | 322 | 3257 | 5 | chr7A.!!$F2 | 2935 |
6 | TraesCS7D01G541100 | chr7A | 726657547 | 726661975 | 4428 | False | 920.500000 | 1748 | 89.611500 | 322 | 3257 | 4 | chr7A.!!$F1 | 2935 |
7 | TraesCS7D01G541100 | chr7A | 727046177 | 727048016 | 1839 | True | 693.500000 | 891 | 85.957500 | 1877 | 3248 | 2 | chr7A.!!$R2 | 1371 |
8 | TraesCS7D01G541100 | chr7A | 727001649 | 727004553 | 2904 | True | 512.780000 | 1413 | 91.413400 | 285 | 2334 | 5 | chr7A.!!$R1 | 2049 |
9 | TraesCS7D01G541100 | chr7B | 733376882 | 733378688 | 1806 | True | 868.500000 | 1059 | 86.889500 | 446 | 2353 | 2 | chr7B.!!$R1 | 1907 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
176 | 177 | 0.038744 | CAAGCATGGAGGGGACTTGT | 59.961 | 55.0 | 0.0 | 0.0 | 44.43 | 3.16 | F |
177 | 178 | 0.038744 | AAGCATGGAGGGGACTTGTG | 59.961 | 55.0 | 0.0 | 0.0 | 44.43 | 3.33 | F |
1477 | 2483 | 0.112412 | TTCCAAACCTCCCTTCTGGC | 59.888 | 55.0 | 0.0 | 0.0 | 0.00 | 4.85 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1466 | 2472 | 0.622665 | ATTGTCCAGCCAGAAGGGAG | 59.377 | 55.0 | 0.0 | 0.0 | 40.01 | 4.30 | R |
1660 | 2724 | 0.666274 | TGCAGGTCGAAGCGTACAAG | 60.666 | 55.0 | 0.0 | 0.0 | 0.00 | 3.16 | R |
2920 | 7284 | 0.257328 | TGGTCACCTTTTGTCCAGCA | 59.743 | 50.0 | 0.0 | 0.0 | 38.37 | 4.41 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
53 | 54 | 8.839310 | AATAATACTAGCTCCTGCATAAAGTG | 57.161 | 34.615 | 0.00 | 0.00 | 42.74 | 3.16 |
66 | 67 | 4.361451 | CATAAAGTGCACATTCCTGGTC | 57.639 | 45.455 | 21.04 | 0.00 | 0.00 | 4.02 |
67 | 68 | 2.664402 | AAAGTGCACATTCCTGGTCT | 57.336 | 45.000 | 21.04 | 0.00 | 0.00 | 3.85 |
68 | 69 | 2.664402 | AAGTGCACATTCCTGGTCTT | 57.336 | 45.000 | 21.04 | 0.00 | 0.00 | 3.01 |
69 | 70 | 2.191128 | AGTGCACATTCCTGGTCTTC | 57.809 | 50.000 | 21.04 | 0.00 | 0.00 | 2.87 |
70 | 71 | 0.798776 | GTGCACATTCCTGGTCTTCG | 59.201 | 55.000 | 13.17 | 0.00 | 0.00 | 3.79 |
71 | 72 | 0.684535 | TGCACATTCCTGGTCTTCGA | 59.315 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
72 | 73 | 1.278985 | TGCACATTCCTGGTCTTCGAT | 59.721 | 47.619 | 0.00 | 0.00 | 0.00 | 3.59 |
73 | 74 | 2.499693 | TGCACATTCCTGGTCTTCGATA | 59.500 | 45.455 | 0.00 | 0.00 | 0.00 | 2.92 |
74 | 75 | 3.134623 | TGCACATTCCTGGTCTTCGATAT | 59.865 | 43.478 | 0.00 | 0.00 | 0.00 | 1.63 |
75 | 76 | 3.496130 | GCACATTCCTGGTCTTCGATATG | 59.504 | 47.826 | 0.00 | 0.00 | 0.00 | 1.78 |
76 | 77 | 4.697514 | CACATTCCTGGTCTTCGATATGT | 58.302 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
77 | 78 | 4.747108 | CACATTCCTGGTCTTCGATATGTC | 59.253 | 45.833 | 0.00 | 0.00 | 0.00 | 3.06 |
78 | 79 | 4.405680 | ACATTCCTGGTCTTCGATATGTCA | 59.594 | 41.667 | 0.00 | 0.00 | 0.00 | 3.58 |
79 | 80 | 4.386867 | TTCCTGGTCTTCGATATGTCAC | 57.613 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
80 | 81 | 2.357952 | TCCTGGTCTTCGATATGTCACG | 59.642 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
81 | 82 | 2.099263 | CCTGGTCTTCGATATGTCACGT | 59.901 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
82 | 83 | 3.314357 | CCTGGTCTTCGATATGTCACGTA | 59.686 | 47.826 | 0.00 | 0.00 | 0.00 | 3.57 |
83 | 84 | 4.528504 | CTGGTCTTCGATATGTCACGTAG | 58.471 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
84 | 85 | 3.242969 | TGGTCTTCGATATGTCACGTAGC | 60.243 | 47.826 | 0.00 | 0.00 | 0.00 | 3.58 |
85 | 86 | 3.242969 | GGTCTTCGATATGTCACGTAGCA | 60.243 | 47.826 | 0.00 | 0.00 | 0.00 | 3.49 |
86 | 87 | 4.537965 | GTCTTCGATATGTCACGTAGCAT | 58.462 | 43.478 | 8.70 | 8.70 | 0.00 | 3.79 |
87 | 88 | 4.976731 | GTCTTCGATATGTCACGTAGCATT | 59.023 | 41.667 | 8.92 | 0.00 | 0.00 | 3.56 |
88 | 89 | 6.140786 | GTCTTCGATATGTCACGTAGCATTA | 58.859 | 40.000 | 8.92 | 0.00 | 0.00 | 1.90 |
89 | 90 | 6.303496 | GTCTTCGATATGTCACGTAGCATTAG | 59.697 | 42.308 | 8.92 | 3.11 | 0.00 | 1.73 |
90 | 91 | 4.473199 | TCGATATGTCACGTAGCATTAGC | 58.527 | 43.478 | 8.92 | 0.00 | 42.56 | 3.09 |
112 | 113 | 7.277174 | AGCTACTATTTTGTTTATCCATGCC | 57.723 | 36.000 | 0.00 | 0.00 | 0.00 | 4.40 |
113 | 114 | 7.062957 | AGCTACTATTTTGTTTATCCATGCCT | 58.937 | 34.615 | 0.00 | 0.00 | 0.00 | 4.75 |
114 | 115 | 7.013655 | AGCTACTATTTTGTTTATCCATGCCTG | 59.986 | 37.037 | 0.00 | 0.00 | 0.00 | 4.85 |
115 | 116 | 6.469782 | ACTATTTTGTTTATCCATGCCTGG | 57.530 | 37.500 | 0.78 | 0.78 | 44.64 | 4.45 |
116 | 117 | 5.957774 | ACTATTTTGTTTATCCATGCCTGGT | 59.042 | 36.000 | 7.98 | 0.00 | 43.61 | 4.00 |
117 | 118 | 4.533919 | TTTTGTTTATCCATGCCTGGTG | 57.466 | 40.909 | 7.98 | 0.00 | 43.61 | 4.17 |
118 | 119 | 3.448093 | TTGTTTATCCATGCCTGGTGA | 57.552 | 42.857 | 7.98 | 0.00 | 43.61 | 4.02 |
119 | 120 | 3.003394 | TGTTTATCCATGCCTGGTGAG | 57.997 | 47.619 | 7.98 | 0.00 | 43.61 | 3.51 |
120 | 121 | 2.308570 | TGTTTATCCATGCCTGGTGAGT | 59.691 | 45.455 | 7.98 | 0.00 | 43.61 | 3.41 |
121 | 122 | 3.521531 | TGTTTATCCATGCCTGGTGAGTA | 59.478 | 43.478 | 7.98 | 0.00 | 43.61 | 2.59 |
122 | 123 | 4.130118 | GTTTATCCATGCCTGGTGAGTAG | 58.870 | 47.826 | 7.98 | 0.00 | 43.61 | 2.57 |
123 | 124 | 2.180946 | ATCCATGCCTGGTGAGTAGA | 57.819 | 50.000 | 7.98 | 0.00 | 43.61 | 2.59 |
124 | 125 | 1.489481 | TCCATGCCTGGTGAGTAGAG | 58.511 | 55.000 | 7.98 | 0.00 | 43.61 | 2.43 |
125 | 126 | 1.007118 | TCCATGCCTGGTGAGTAGAGA | 59.993 | 52.381 | 7.98 | 0.00 | 43.61 | 3.10 |
126 | 127 | 2.045524 | CCATGCCTGGTGAGTAGAGAT | 58.954 | 52.381 | 0.00 | 0.00 | 37.79 | 2.75 |
127 | 128 | 3.117131 | TCCATGCCTGGTGAGTAGAGATA | 60.117 | 47.826 | 7.98 | 0.00 | 43.61 | 1.98 |
128 | 129 | 3.837146 | CCATGCCTGGTGAGTAGAGATAT | 59.163 | 47.826 | 0.00 | 0.00 | 37.79 | 1.63 |
129 | 130 | 4.322574 | CCATGCCTGGTGAGTAGAGATATG | 60.323 | 50.000 | 0.00 | 0.00 | 37.79 | 1.78 |
130 | 131 | 3.916035 | TGCCTGGTGAGTAGAGATATGT | 58.084 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
131 | 132 | 5.061721 | TGCCTGGTGAGTAGAGATATGTA | 57.938 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
132 | 133 | 5.645201 | TGCCTGGTGAGTAGAGATATGTAT | 58.355 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
133 | 134 | 6.077993 | TGCCTGGTGAGTAGAGATATGTATT | 58.922 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
134 | 135 | 6.554982 | TGCCTGGTGAGTAGAGATATGTATTT | 59.445 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
135 | 136 | 6.870965 | GCCTGGTGAGTAGAGATATGTATTTG | 59.129 | 42.308 | 0.00 | 0.00 | 0.00 | 2.32 |
136 | 137 | 7.472100 | GCCTGGTGAGTAGAGATATGTATTTGT | 60.472 | 40.741 | 0.00 | 0.00 | 0.00 | 2.83 |
137 | 138 | 9.078990 | CCTGGTGAGTAGAGATATGTATTTGTA | 57.921 | 37.037 | 0.00 | 0.00 | 0.00 | 2.41 |
139 | 140 | 8.577296 | TGGTGAGTAGAGATATGTATTTGTAGC | 58.423 | 37.037 | 0.00 | 0.00 | 0.00 | 3.58 |
140 | 141 | 8.030106 | GGTGAGTAGAGATATGTATTTGTAGCC | 58.970 | 40.741 | 0.00 | 0.00 | 0.00 | 3.93 |
141 | 142 | 8.577296 | GTGAGTAGAGATATGTATTTGTAGCCA | 58.423 | 37.037 | 0.00 | 0.00 | 0.00 | 4.75 |
142 | 143 | 9.314133 | TGAGTAGAGATATGTATTTGTAGCCAT | 57.686 | 33.333 | 0.00 | 0.00 | 0.00 | 4.40 |
145 | 146 | 9.522804 | GTAGAGATATGTATTTGTAGCCATAGC | 57.477 | 37.037 | 0.00 | 0.00 | 40.32 | 2.97 |
146 | 147 | 7.560368 | AGAGATATGTATTTGTAGCCATAGCC | 58.440 | 38.462 | 0.00 | 0.00 | 41.25 | 3.93 |
147 | 148 | 6.653989 | AGATATGTATTTGTAGCCATAGCCC | 58.346 | 40.000 | 0.00 | 0.00 | 41.25 | 5.19 |
148 | 149 | 6.445139 | AGATATGTATTTGTAGCCATAGCCCT | 59.555 | 38.462 | 0.00 | 0.00 | 41.25 | 5.19 |
149 | 150 | 4.788925 | TGTATTTGTAGCCATAGCCCTT | 57.211 | 40.909 | 0.00 | 0.00 | 41.25 | 3.95 |
150 | 151 | 5.897851 | TGTATTTGTAGCCATAGCCCTTA | 57.102 | 39.130 | 0.00 | 0.00 | 41.25 | 2.69 |
151 | 152 | 5.865085 | TGTATTTGTAGCCATAGCCCTTAG | 58.135 | 41.667 | 0.00 | 0.00 | 41.25 | 2.18 |
152 | 153 | 3.857157 | TTTGTAGCCATAGCCCTTAGG | 57.143 | 47.619 | 0.00 | 0.00 | 41.25 | 2.69 |
175 | 176 | 2.877975 | CAAGCATGGAGGGGACTTG | 58.122 | 57.895 | 0.00 | 0.00 | 44.43 | 3.16 |
176 | 177 | 0.038744 | CAAGCATGGAGGGGACTTGT | 59.961 | 55.000 | 0.00 | 0.00 | 44.43 | 3.16 |
177 | 178 | 0.038744 | AAGCATGGAGGGGACTTGTG | 59.961 | 55.000 | 0.00 | 0.00 | 44.43 | 3.33 |
178 | 179 | 1.136329 | AGCATGGAGGGGACTTGTGT | 61.136 | 55.000 | 0.00 | 0.00 | 44.43 | 3.72 |
179 | 180 | 0.618458 | GCATGGAGGGGACTTGTGTA | 59.382 | 55.000 | 0.00 | 0.00 | 44.43 | 2.90 |
180 | 181 | 1.004277 | GCATGGAGGGGACTTGTGTAA | 59.996 | 52.381 | 0.00 | 0.00 | 44.43 | 2.41 |
181 | 182 | 2.711542 | CATGGAGGGGACTTGTGTAAC | 58.288 | 52.381 | 0.00 | 0.00 | 44.43 | 2.50 |
206 | 207 | 9.631257 | ACATAATACCAGAATTTCATGTCATGA | 57.369 | 29.630 | 11.62 | 11.62 | 37.55 | 3.07 |
207 | 208 | 9.888878 | CATAATACCAGAATTTCATGTCATGAC | 57.111 | 33.333 | 19.27 | 19.27 | 39.39 | 3.06 |
208 | 209 | 7.943079 | AATACCAGAATTTCATGTCATGACA | 57.057 | 32.000 | 29.67 | 29.67 | 46.44 | 3.58 |
209 | 210 | 5.633830 | ACCAGAATTTCATGTCATGACAC | 57.366 | 39.130 | 30.09 | 15.53 | 45.05 | 3.67 |
210 | 211 | 5.072055 | ACCAGAATTTCATGTCATGACACA | 58.928 | 37.500 | 30.09 | 17.10 | 45.05 | 3.72 |
211 | 212 | 5.713389 | ACCAGAATTTCATGTCATGACACAT | 59.287 | 36.000 | 30.09 | 13.46 | 45.05 | 3.21 |
221 | 222 | 4.754372 | GTCATGACACATGACAACACAT | 57.246 | 40.909 | 28.37 | 0.00 | 45.61 | 3.21 |
222 | 223 | 5.112220 | GTCATGACACATGACAACACATT | 57.888 | 39.130 | 28.37 | 0.00 | 45.61 | 2.71 |
223 | 224 | 5.522456 | GTCATGACACATGACAACACATTT | 58.478 | 37.500 | 28.37 | 0.00 | 45.61 | 2.32 |
224 | 225 | 5.978919 | GTCATGACACATGACAACACATTTT | 59.021 | 36.000 | 28.37 | 0.00 | 45.61 | 1.82 |
225 | 226 | 6.142798 | GTCATGACACATGACAACACATTTTC | 59.857 | 38.462 | 28.37 | 7.18 | 45.61 | 2.29 |
226 | 227 | 5.833406 | TGACACATGACAACACATTTTCT | 57.167 | 34.783 | 0.00 | 0.00 | 0.00 | 2.52 |
227 | 228 | 5.820131 | TGACACATGACAACACATTTTCTC | 58.180 | 37.500 | 0.00 | 0.00 | 0.00 | 2.87 |
228 | 229 | 5.589855 | TGACACATGACAACACATTTTCTCT | 59.410 | 36.000 | 0.00 | 0.00 | 0.00 | 3.10 |
229 | 230 | 6.765512 | TGACACATGACAACACATTTTCTCTA | 59.234 | 34.615 | 0.00 | 0.00 | 0.00 | 2.43 |
230 | 231 | 7.041848 | TGACACATGACAACACATTTTCTCTAG | 60.042 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
231 | 232 | 6.082338 | CACATGACAACACATTTTCTCTAGC | 58.918 | 40.000 | 0.00 | 0.00 | 0.00 | 3.42 |
232 | 233 | 6.000219 | ACATGACAACACATTTTCTCTAGCT | 59.000 | 36.000 | 0.00 | 0.00 | 0.00 | 3.32 |
233 | 234 | 7.118245 | CACATGACAACACATTTTCTCTAGCTA | 59.882 | 37.037 | 0.00 | 0.00 | 0.00 | 3.32 |
234 | 235 | 7.826252 | ACATGACAACACATTTTCTCTAGCTAT | 59.174 | 33.333 | 0.00 | 0.00 | 0.00 | 2.97 |
235 | 236 | 7.601073 | TGACAACACATTTTCTCTAGCTATG | 57.399 | 36.000 | 0.00 | 0.00 | 0.00 | 2.23 |
236 | 237 | 7.386059 | TGACAACACATTTTCTCTAGCTATGA | 58.614 | 34.615 | 0.00 | 0.00 | 0.00 | 2.15 |
237 | 238 | 8.043113 | TGACAACACATTTTCTCTAGCTATGAT | 58.957 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
238 | 239 | 8.430801 | ACAACACATTTTCTCTAGCTATGATC | 57.569 | 34.615 | 0.00 | 0.00 | 0.00 | 2.92 |
239 | 240 | 8.263640 | ACAACACATTTTCTCTAGCTATGATCT | 58.736 | 33.333 | 0.00 | 0.00 | 0.00 | 2.75 |
240 | 241 | 8.763356 | CAACACATTTTCTCTAGCTATGATCTC | 58.237 | 37.037 | 0.00 | 0.00 | 0.00 | 2.75 |
241 | 242 | 8.016301 | ACACATTTTCTCTAGCTATGATCTCA | 57.984 | 34.615 | 0.00 | 0.00 | 0.00 | 3.27 |
242 | 243 | 8.481314 | ACACATTTTCTCTAGCTATGATCTCAA | 58.519 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
243 | 244 | 8.763356 | CACATTTTCTCTAGCTATGATCTCAAC | 58.237 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
244 | 245 | 8.481314 | ACATTTTCTCTAGCTATGATCTCAACA | 58.519 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
245 | 246 | 9.322773 | CATTTTCTCTAGCTATGATCTCAACAA | 57.677 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
246 | 247 | 8.709386 | TTTTCTCTAGCTATGATCTCAACAAC | 57.291 | 34.615 | 0.00 | 0.00 | 0.00 | 3.32 |
247 | 248 | 6.398234 | TCTCTAGCTATGATCTCAACAACC | 57.602 | 41.667 | 0.00 | 0.00 | 0.00 | 3.77 |
248 | 249 | 5.303078 | TCTCTAGCTATGATCTCAACAACCC | 59.697 | 44.000 | 0.00 | 0.00 | 0.00 | 4.11 |
249 | 250 | 5.211973 | TCTAGCTATGATCTCAACAACCCT | 58.788 | 41.667 | 0.00 | 0.00 | 0.00 | 4.34 |
250 | 251 | 6.373759 | TCTAGCTATGATCTCAACAACCCTA | 58.626 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
251 | 252 | 7.013220 | TCTAGCTATGATCTCAACAACCCTAT | 58.987 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
252 | 253 | 5.862845 | AGCTATGATCTCAACAACCCTATG | 58.137 | 41.667 | 0.00 | 0.00 | 0.00 | 2.23 |
253 | 254 | 4.999950 | GCTATGATCTCAACAACCCTATGG | 59.000 | 45.833 | 0.00 | 0.00 | 37.80 | 2.74 |
254 | 255 | 3.281727 | TGATCTCAACAACCCTATGGC | 57.718 | 47.619 | 0.00 | 0.00 | 33.59 | 4.40 |
255 | 256 | 2.846206 | TGATCTCAACAACCCTATGGCT | 59.154 | 45.455 | 0.00 | 0.00 | 33.59 | 4.75 |
256 | 257 | 3.118261 | TGATCTCAACAACCCTATGGCTC | 60.118 | 47.826 | 0.00 | 0.00 | 33.59 | 4.70 |
257 | 258 | 2.265367 | TCTCAACAACCCTATGGCTCA | 58.735 | 47.619 | 0.00 | 0.00 | 33.59 | 4.26 |
258 | 259 | 2.237143 | TCTCAACAACCCTATGGCTCAG | 59.763 | 50.000 | 0.00 | 0.00 | 33.59 | 3.35 |
259 | 260 | 1.985159 | TCAACAACCCTATGGCTCAGT | 59.015 | 47.619 | 0.00 | 0.00 | 33.59 | 3.41 |
260 | 261 | 3.178046 | TCAACAACCCTATGGCTCAGTA | 58.822 | 45.455 | 0.00 | 0.00 | 33.59 | 2.74 |
261 | 262 | 3.055385 | TCAACAACCCTATGGCTCAGTAC | 60.055 | 47.826 | 0.00 | 0.00 | 33.59 | 2.73 |
262 | 263 | 1.838077 | ACAACCCTATGGCTCAGTACC | 59.162 | 52.381 | 0.00 | 0.00 | 33.59 | 3.34 |
263 | 264 | 1.837439 | CAACCCTATGGCTCAGTACCA | 59.163 | 52.381 | 0.00 | 0.00 | 42.61 | 3.25 |
264 | 265 | 1.794714 | ACCCTATGGCTCAGTACCAG | 58.205 | 55.000 | 0.00 | 0.00 | 41.46 | 4.00 |
265 | 266 | 1.291033 | ACCCTATGGCTCAGTACCAGA | 59.709 | 52.381 | 0.00 | 0.00 | 41.46 | 3.86 |
266 | 267 | 1.689273 | CCCTATGGCTCAGTACCAGAC | 59.311 | 57.143 | 0.00 | 0.00 | 41.46 | 3.51 |
267 | 268 | 2.672098 | CCTATGGCTCAGTACCAGACT | 58.328 | 52.381 | 0.00 | 0.00 | 41.46 | 3.24 |
268 | 269 | 3.034635 | CCTATGGCTCAGTACCAGACTT | 58.965 | 50.000 | 0.00 | 0.00 | 41.46 | 3.01 |
269 | 270 | 3.452627 | CCTATGGCTCAGTACCAGACTTT | 59.547 | 47.826 | 0.00 | 0.00 | 41.46 | 2.66 |
270 | 271 | 4.649674 | CCTATGGCTCAGTACCAGACTTTA | 59.350 | 45.833 | 0.00 | 0.00 | 41.46 | 1.85 |
271 | 272 | 5.305644 | CCTATGGCTCAGTACCAGACTTTAT | 59.694 | 44.000 | 0.00 | 0.00 | 41.46 | 1.40 |
272 | 273 | 5.700402 | ATGGCTCAGTACCAGACTTTATT | 57.300 | 39.130 | 0.00 | 0.00 | 41.46 | 1.40 |
273 | 274 | 4.832248 | TGGCTCAGTACCAGACTTTATTG | 58.168 | 43.478 | 0.00 | 0.00 | 35.64 | 1.90 |
274 | 275 | 4.286032 | TGGCTCAGTACCAGACTTTATTGT | 59.714 | 41.667 | 0.00 | 0.00 | 35.64 | 2.71 |
275 | 276 | 5.482526 | TGGCTCAGTACCAGACTTTATTGTA | 59.517 | 40.000 | 0.00 | 0.00 | 35.64 | 2.41 |
276 | 277 | 6.156256 | TGGCTCAGTACCAGACTTTATTGTAT | 59.844 | 38.462 | 0.00 | 0.00 | 35.64 | 2.29 |
277 | 278 | 6.480320 | GGCTCAGTACCAGACTTTATTGTATG | 59.520 | 42.308 | 0.00 | 0.00 | 35.64 | 2.39 |
278 | 279 | 7.265673 | GCTCAGTACCAGACTTTATTGTATGA | 58.734 | 38.462 | 0.00 | 0.00 | 35.64 | 2.15 |
279 | 280 | 7.928706 | GCTCAGTACCAGACTTTATTGTATGAT | 59.071 | 37.037 | 0.00 | 0.00 | 35.64 | 2.45 |
280 | 281 | 9.254133 | CTCAGTACCAGACTTTATTGTATGATG | 57.746 | 37.037 | 0.00 | 0.00 | 35.64 | 3.07 |
281 | 282 | 7.710907 | TCAGTACCAGACTTTATTGTATGATGC | 59.289 | 37.037 | 0.00 | 0.00 | 35.64 | 3.91 |
282 | 283 | 7.712639 | CAGTACCAGACTTTATTGTATGATGCT | 59.287 | 37.037 | 0.00 | 0.00 | 35.64 | 3.79 |
283 | 284 | 8.267894 | AGTACCAGACTTTATTGTATGATGCTT | 58.732 | 33.333 | 0.00 | 0.00 | 33.13 | 3.91 |
292 | 293 | 3.751479 | TGTATGATGCTTCCGCTATGT | 57.249 | 42.857 | 0.00 | 0.00 | 36.97 | 2.29 |
297 | 298 | 2.168313 | TGATGCTTCCGCTATGTCTTGA | 59.832 | 45.455 | 0.00 | 0.00 | 36.97 | 3.02 |
299 | 300 | 1.275010 | TGCTTCCGCTATGTCTTGACA | 59.725 | 47.619 | 5.89 | 5.89 | 36.97 | 3.58 |
314 | 315 | 5.769662 | TGTCTTGACAGCAATACATTTCCTT | 59.230 | 36.000 | 0.00 | 0.00 | 36.54 | 3.36 |
375 | 693 | 6.094048 | GCCTTTGAGTAAGAGTAATGCATTCA | 59.906 | 38.462 | 16.86 | 1.05 | 35.80 | 2.57 |
378 | 696 | 5.118990 | TGAGTAAGAGTAATGCATTCAGGC | 58.881 | 41.667 | 16.86 | 5.23 | 0.00 | 4.85 |
383 | 1062 | 2.481952 | GAGTAATGCATTCAGGCGATCC | 59.518 | 50.000 | 16.86 | 0.00 | 36.28 | 3.36 |
388 | 1067 | 0.602372 | GCATTCAGGCGATCCTCTCC | 60.602 | 60.000 | 0.00 | 0.00 | 41.93 | 3.71 |
394 | 1073 | 3.934962 | GCGATCCTCTCCCCCAGC | 61.935 | 72.222 | 0.00 | 0.00 | 0.00 | 4.85 |
397 | 1076 | 3.758133 | GATCCTCTCCCCCAGCGGA | 62.758 | 68.421 | 0.00 | 0.00 | 40.48 | 5.54 |
398 | 1077 | 3.106859 | ATCCTCTCCCCCAGCGGAT | 62.107 | 63.158 | 0.00 | 0.00 | 40.59 | 4.18 |
399 | 1078 | 3.554342 | CCTCTCCCCCAGCGGATG | 61.554 | 72.222 | 0.00 | 0.00 | 0.00 | 3.51 |
400 | 1079 | 2.444706 | CTCTCCCCCAGCGGATGA | 60.445 | 66.667 | 0.00 | 0.00 | 0.00 | 2.92 |
401 | 1080 | 2.040442 | TCTCCCCCAGCGGATGAA | 59.960 | 61.111 | 0.00 | 0.00 | 0.00 | 2.57 |
403 | 1082 | 1.228063 | CTCCCCCAGCGGATGAATG | 60.228 | 63.158 | 0.00 | 0.00 | 0.00 | 2.67 |
481 | 1178 | 5.945784 | TCCGAAAATTTGATGGAAGAGTCAT | 59.054 | 36.000 | 4.34 | 0.00 | 0.00 | 3.06 |
507 | 1370 | 1.212688 | TGACATCCCCAAGCTGGTATG | 59.787 | 52.381 | 0.00 | 0.56 | 35.17 | 2.39 |
625 | 1490 | 5.690865 | TGGAATAATACCTTCCATGGACAC | 58.309 | 41.667 | 15.91 | 0.00 | 45.56 | 3.67 |
627 | 1492 | 6.126409 | GGAATAATACCTTCCATGGACACAA | 58.874 | 40.000 | 15.91 | 0.00 | 41.55 | 3.33 |
709 | 1579 | 5.595952 | GTCTTCCTGGAATGGAATATGCTTT | 59.404 | 40.000 | 10.03 | 0.00 | 44.17 | 3.51 |
710 | 1580 | 5.595542 | TCTTCCTGGAATGGAATATGCTTTG | 59.404 | 40.000 | 10.03 | 0.00 | 44.17 | 2.77 |
809 | 1721 | 0.974383 | CCAAAGTCCACCGTACCTCT | 59.026 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
812 | 1724 | 1.254954 | AAGTCCACCGTACCTCTCAC | 58.745 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
834 | 1767 | 8.727100 | TCACATGGATAATATAGTCAGTTCCT | 57.273 | 34.615 | 0.00 | 0.00 | 0.00 | 3.36 |
939 | 1881 | 2.112297 | GTTGCCTCCCCACAACGA | 59.888 | 61.111 | 0.00 | 0.00 | 37.08 | 3.85 |
964 | 1922 | 5.844004 | ACCGTATCTCCATTAAAGTAGCTG | 58.156 | 41.667 | 0.00 | 0.00 | 0.00 | 4.24 |
965 | 1923 | 5.597182 | ACCGTATCTCCATTAAAGTAGCTGA | 59.403 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
982 | 1940 | 4.691860 | GCTGAGAGAGCTTGCATTTTTA | 57.308 | 40.909 | 0.00 | 0.00 | 45.21 | 1.52 |
1230 | 2207 | 2.549064 | TCATCATCCGCCATAAGGTG | 57.451 | 50.000 | 0.00 | 0.00 | 45.25 | 4.00 |
1245 | 2243 | 2.496899 | AGGTGCCTACTGTTGATTGG | 57.503 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1271 | 2277 | 8.391106 | GGAAAATATACTGAAACAGTGCAGTAG | 58.609 | 37.037 | 17.08 | 0.00 | 46.96 | 2.57 |
1289 | 2295 | 5.508489 | GCAGTAGCCTGTAACGGATGTAATA | 60.508 | 44.000 | 0.00 | 0.00 | 41.02 | 0.98 |
1294 | 2300 | 7.316544 | AGCCTGTAACGGATGTAATAAAAAG | 57.683 | 36.000 | 0.00 | 0.00 | 0.00 | 2.27 |
1462 | 2468 | 3.452990 | TCAACTACACAGGTCTGTTTCCA | 59.547 | 43.478 | 0.20 | 0.00 | 42.83 | 3.53 |
1463 | 2469 | 4.080807 | TCAACTACACAGGTCTGTTTCCAA | 60.081 | 41.667 | 0.20 | 0.00 | 42.83 | 3.53 |
1464 | 2470 | 4.497291 | ACTACACAGGTCTGTTTCCAAA | 57.503 | 40.909 | 0.20 | 0.00 | 42.83 | 3.28 |
1465 | 2471 | 4.196971 | ACTACACAGGTCTGTTTCCAAAC | 58.803 | 43.478 | 0.20 | 0.00 | 42.83 | 2.93 |
1466 | 2472 | 2.375146 | ACACAGGTCTGTTTCCAAACC | 58.625 | 47.619 | 0.20 | 0.00 | 42.83 | 3.27 |
1477 | 2483 | 0.112412 | TTCCAAACCTCCCTTCTGGC | 59.888 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1478 | 2484 | 0.772124 | TCCAAACCTCCCTTCTGGCT | 60.772 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
1479 | 2485 | 0.610232 | CCAAACCTCCCTTCTGGCTG | 60.610 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1480 | 2486 | 0.610232 | CAAACCTCCCTTCTGGCTGG | 60.610 | 60.000 | 0.00 | 0.00 | 34.74 | 4.85 |
1481 | 2487 | 0.772124 | AAACCTCCCTTCTGGCTGGA | 60.772 | 55.000 | 0.00 | 0.00 | 33.40 | 3.86 |
1530 | 2567 | 1.864565 | AACATTTTTGGGCACGCTTC | 58.135 | 45.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1611 | 2675 | 4.558538 | ATTCAGAGCTTCACACAAACAC | 57.441 | 40.909 | 0.00 | 0.00 | 0.00 | 3.32 |
1660 | 2724 | 9.122613 | CTGCTTTAACTTTCTCATAGAAAAAGC | 57.877 | 33.333 | 19.81 | 19.81 | 45.38 | 3.51 |
1682 | 2762 | 0.179134 | GTACGCTTCGACCTGCAGAT | 60.179 | 55.000 | 17.39 | 0.00 | 0.00 | 2.90 |
1692 | 2855 | 2.550606 | CGACCTGCAGATACTAGTCTCC | 59.449 | 54.545 | 17.39 | 0.00 | 0.00 | 3.71 |
1759 | 2922 | 2.749621 | CAACTGGTCTTATGACTTGGCC | 59.250 | 50.000 | 8.51 | 0.00 | 42.54 | 5.36 |
1760 | 2923 | 1.985159 | ACTGGTCTTATGACTTGGCCA | 59.015 | 47.619 | 0.00 | 0.00 | 42.54 | 5.36 |
1761 | 2924 | 2.375174 | ACTGGTCTTATGACTTGGCCAA | 59.625 | 45.455 | 19.25 | 19.25 | 42.54 | 4.52 |
1762 | 2925 | 3.012518 | CTGGTCTTATGACTTGGCCAAG | 58.987 | 50.000 | 38.30 | 38.30 | 42.54 | 3.61 |
1763 | 2926 | 2.642311 | TGGTCTTATGACTTGGCCAAGA | 59.358 | 45.455 | 44.50 | 27.96 | 42.54 | 3.02 |
1764 | 2927 | 3.266772 | TGGTCTTATGACTTGGCCAAGAT | 59.733 | 43.478 | 44.50 | 31.68 | 42.54 | 2.40 |
1765 | 2928 | 3.879892 | GGTCTTATGACTTGGCCAAGATC | 59.120 | 47.826 | 44.50 | 34.73 | 42.54 | 2.75 |
1766 | 2929 | 4.517285 | GTCTTATGACTTGGCCAAGATCA | 58.483 | 43.478 | 44.50 | 38.00 | 40.79 | 2.92 |
1767 | 2930 | 5.128919 | GTCTTATGACTTGGCCAAGATCAT | 58.871 | 41.667 | 44.50 | 40.07 | 40.79 | 2.45 |
1768 | 2931 | 5.591877 | GTCTTATGACTTGGCCAAGATCATT | 59.408 | 40.000 | 38.86 | 29.74 | 40.79 | 2.57 |
1769 | 2932 | 5.591472 | TCTTATGACTTGGCCAAGATCATTG | 59.409 | 40.000 | 38.86 | 33.21 | 40.79 | 2.82 |
1770 | 2933 | 3.438216 | TGACTTGGCCAAGATCATTGA | 57.562 | 42.857 | 44.50 | 19.24 | 40.79 | 2.57 |
1771 | 2934 | 3.765381 | TGACTTGGCCAAGATCATTGAA | 58.235 | 40.909 | 44.50 | 21.39 | 40.79 | 2.69 |
1772 | 2935 | 3.507233 | TGACTTGGCCAAGATCATTGAAC | 59.493 | 43.478 | 44.50 | 23.82 | 40.79 | 3.18 |
1773 | 2936 | 3.760684 | GACTTGGCCAAGATCATTGAACT | 59.239 | 43.478 | 44.50 | 22.91 | 40.79 | 3.01 |
1774 | 2937 | 4.154942 | ACTTGGCCAAGATCATTGAACTT | 58.845 | 39.130 | 44.50 | 20.04 | 40.79 | 2.66 |
1775 | 2938 | 4.590222 | ACTTGGCCAAGATCATTGAACTTT | 59.410 | 37.500 | 44.50 | 19.84 | 40.79 | 2.66 |
1776 | 2939 | 5.070847 | ACTTGGCCAAGATCATTGAACTTTT | 59.929 | 36.000 | 44.50 | 19.41 | 40.79 | 2.27 |
1777 | 2940 | 5.549742 | TGGCCAAGATCATTGAACTTTTT | 57.450 | 34.783 | 0.61 | 0.00 | 0.00 | 1.94 |
1837 | 3024 | 3.670311 | ACATCTAGTGCTACACGTACG | 57.330 | 47.619 | 15.01 | 15.01 | 39.64 | 3.67 |
1985 | 3172 | 2.512515 | GTGCGAGGAGACCATGGC | 60.513 | 66.667 | 13.04 | 4.70 | 0.00 | 4.40 |
2018 | 3205 | 1.145156 | CCGACAACAGTGGTGACCA | 59.855 | 57.895 | 16.89 | 0.00 | 0.00 | 4.02 |
2048 | 3235 | 3.349006 | GTGCTGCACCGACACTGG | 61.349 | 66.667 | 21.78 | 0.00 | 0.00 | 4.00 |
2065 | 3252 | 1.900498 | GGCATGGCTCCTATGGCAC | 60.900 | 63.158 | 12.86 | 0.00 | 46.71 | 5.01 |
2271 | 3469 | 3.070878 | TGGTTTGACAGAGTGCATGAGTA | 59.929 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
2284 | 3902 | 8.361139 | AGAGTGCATGAGTATAATTGTAGGTAC | 58.639 | 37.037 | 0.00 | 0.00 | 0.00 | 3.34 |
2338 | 3956 | 8.880265 | CGATTATATGATACGAGTAACGCATAC | 58.120 | 37.037 | 0.00 | 0.00 | 46.94 | 2.39 |
2388 | 4010 | 8.579682 | AGAAAAGCCGCAAATATAATTGATTC | 57.420 | 30.769 | 4.66 | 0.07 | 31.84 | 2.52 |
2392 | 4015 | 8.947055 | AAGCCGCAAATATAATTGATTCTTTT | 57.053 | 26.923 | 4.66 | 0.00 | 31.84 | 2.27 |
2411 | 4034 | 8.574196 | TTCTTTTAAAGAAAACAGTAGCATGC | 57.426 | 30.769 | 16.64 | 10.51 | 44.10 | 4.06 |
2494 | 4117 | 5.865552 | CGATCATCTTTTGCCTTCAATTGTT | 59.134 | 36.000 | 5.13 | 0.00 | 31.33 | 2.83 |
2500 | 4123 | 3.815856 | TTGCCTTCAATTGTTTGCTGA | 57.184 | 38.095 | 5.13 | 0.00 | 32.61 | 4.26 |
2523 | 4146 | 3.984633 | CCGCCGAAGCTTAAAAATTTCAA | 59.015 | 39.130 | 0.00 | 0.00 | 36.60 | 2.69 |
2526 | 4149 | 6.309251 | CCGCCGAAGCTTAAAAATTTCAATAA | 59.691 | 34.615 | 0.00 | 0.00 | 36.60 | 1.40 |
2547 | 4170 | 2.437895 | GGTGGTAAGCGGAAGGGC | 60.438 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
2600 | 4223 | 3.093814 | TGAAGACCGTAATAGCCACTCA | 58.906 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
2603 | 4226 | 0.458669 | ACCGTAATAGCCACTCACCG | 59.541 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
2612 | 4235 | 1.019805 | GCCACTCACCGCTAGAAACC | 61.020 | 60.000 | 0.00 | 0.00 | 0.00 | 3.27 |
2657 | 4280 | 9.885743 | CGTGAAAAAGTTTGAAGTTGAAATAAG | 57.114 | 29.630 | 0.00 | 0.00 | 0.00 | 1.73 |
2691 | 4314 | 1.649390 | TTGTGTGTGAAAAGCGGCGT | 61.649 | 50.000 | 9.37 | 0.00 | 0.00 | 5.68 |
2726 | 4372 | 1.570813 | CATGATACTTCGCCGCAGAA | 58.429 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2777 | 4423 | 3.181468 | TGAAGTGCATCATGTTTTTGCCA | 60.181 | 39.130 | 0.00 | 0.00 | 35.51 | 4.92 |
2781 | 4427 | 4.931002 | AGTGCATCATGTTTTTGCCATAAC | 59.069 | 37.500 | 0.00 | 0.00 | 35.51 | 1.89 |
2842 | 4488 | 3.705051 | AGACATCATGCCAAGTTCCATT | 58.295 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
2855 | 7219 | 6.404293 | GCCAAGTTCCATTAATTTCGAAGCTA | 60.404 | 38.462 | 0.00 | 0.00 | 0.00 | 3.32 |
2863 | 7227 | 6.251376 | CCATTAATTTCGAAGCTAGTTTGCAC | 59.749 | 38.462 | 0.00 | 0.00 | 34.99 | 4.57 |
2877 | 7241 | 6.347888 | GCTAGTTTGCACGTTATTTGGAACTA | 60.348 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
2889 | 7253 | 7.377662 | CGTTATTTGGAACTAAAGAGCGTTTTT | 59.622 | 33.333 | 6.43 | 0.00 | 33.08 | 1.94 |
2891 | 7255 | 4.823790 | TGGAACTAAAGAGCGTTTTTCC | 57.176 | 40.909 | 9.48 | 9.48 | 0.00 | 3.13 |
2908 | 7272 | 6.426633 | CGTTTTTCCCTTTTTAATTGCTGGAT | 59.573 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
2922 | 7286 | 9.748708 | TTAATTGCTGGATAATCAGTTAATTGC | 57.251 | 29.630 | 13.75 | 0.00 | 36.00 | 3.56 |
2924 | 7288 | 6.381481 | TGCTGGATAATCAGTTAATTGCTG | 57.619 | 37.500 | 5.74 | 5.74 | 37.12 | 4.41 |
3006 | 7385 | 7.749539 | AAAAGTTTGAAGTTGAAATGTACCG | 57.250 | 32.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3011 | 7390 | 8.126700 | AGTTTGAAGTTGAAATGTACCGTAAAG | 58.873 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
3018 | 7397 | 5.366460 | TGAAATGTACCGTAAAGACAACCA | 58.634 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
3020 | 7399 | 5.934935 | AATGTACCGTAAAGACAACCAAG | 57.065 | 39.130 | 0.00 | 0.00 | 0.00 | 3.61 |
3027 | 7406 | 6.235664 | ACCGTAAAGACAACCAAGACAATAT | 58.764 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
3075 | 7454 | 8.680903 | CATAGCACTTCCAAAACATAGATCTTT | 58.319 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
3077 | 7456 | 5.574443 | GCACTTCCAAAACATAGATCTTTGC | 59.426 | 40.000 | 12.51 | 0.00 | 0.00 | 3.68 |
3083 | 7462 | 0.532862 | ACATAGATCTTTGCCGCCCG | 60.533 | 55.000 | 12.51 | 0.00 | 0.00 | 6.13 |
3087 | 7466 | 2.033448 | ATCTTTGCCGCCCGTCAA | 59.967 | 55.556 | 0.00 | 0.00 | 0.00 | 3.18 |
3097 | 7476 | 2.461110 | GCCCGTCAATGCTACCACG | 61.461 | 63.158 | 0.00 | 0.00 | 0.00 | 4.94 |
3102 | 7481 | 0.953471 | GTCAATGCTACCACGCACCA | 60.953 | 55.000 | 0.00 | 0.00 | 43.61 | 4.17 |
3108 | 7487 | 1.451387 | CTACCACGCACCATTCCCC | 60.451 | 63.158 | 0.00 | 0.00 | 0.00 | 4.81 |
3113 | 7492 | 2.519302 | CGCACCATTCCCCATCCC | 60.519 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
3131 | 7510 | 5.105595 | CCATCCCAAAATTTCAGAGAACTCC | 60.106 | 44.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3145 | 7524 | 3.442076 | AGAACTCCCACTCGACCTATTT | 58.558 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
3146 | 7525 | 3.195825 | AGAACTCCCACTCGACCTATTTG | 59.804 | 47.826 | 0.00 | 0.00 | 0.00 | 2.32 |
3168 | 7547 | 1.825281 | TTGGCCAAATCAAAGCCCGG | 61.825 | 55.000 | 17.98 | 0.00 | 46.55 | 5.73 |
3178 | 7557 | 2.754465 | TCAAAGCCCGGACTAGGAATA | 58.246 | 47.619 | 0.73 | 0.00 | 0.00 | 1.75 |
3185 | 7564 | 2.317040 | CCGGACTAGGAATAGAAGGCA | 58.683 | 52.381 | 0.00 | 0.00 | 0.00 | 4.75 |
3194 | 7573 | 2.300437 | GGAATAGAAGGCAGCGACCTAT | 59.700 | 50.000 | 0.58 | 0.00 | 39.93 | 2.57 |
3196 | 7575 | 4.381079 | GGAATAGAAGGCAGCGACCTATAG | 60.381 | 50.000 | 0.58 | 0.00 | 39.93 | 1.31 |
3249 | 9317 | 1.677966 | TCGTTGGTCCTCCTCCTCG | 60.678 | 63.158 | 0.00 | 0.00 | 34.23 | 4.63 |
3256 | 9324 | 1.038681 | GTCCTCCTCCTCGTCTTCCC | 61.039 | 65.000 | 0.00 | 0.00 | 0.00 | 3.97 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
27 | 28 | 9.277783 | CACTTTATGCAGGAGCTAGTATTATTT | 57.722 | 33.333 | 0.00 | 0.00 | 42.74 | 1.40 |
28 | 29 | 8.839310 | CACTTTATGCAGGAGCTAGTATTATT | 57.161 | 34.615 | 0.00 | 0.00 | 42.74 | 1.40 |
45 | 46 | 4.012374 | AGACCAGGAATGTGCACTTTATG | 58.988 | 43.478 | 19.41 | 17.87 | 0.00 | 1.90 |
46 | 47 | 4.307032 | AGACCAGGAATGTGCACTTTAT | 57.693 | 40.909 | 19.41 | 7.55 | 0.00 | 1.40 |
47 | 48 | 3.788227 | AGACCAGGAATGTGCACTTTA | 57.212 | 42.857 | 19.41 | 0.00 | 0.00 | 1.85 |
48 | 49 | 2.664402 | AGACCAGGAATGTGCACTTT | 57.336 | 45.000 | 19.41 | 18.17 | 0.00 | 2.66 |
49 | 50 | 2.508526 | GAAGACCAGGAATGTGCACTT | 58.491 | 47.619 | 19.41 | 9.21 | 0.00 | 3.16 |
50 | 51 | 1.609061 | CGAAGACCAGGAATGTGCACT | 60.609 | 52.381 | 19.41 | 0.00 | 0.00 | 4.40 |
51 | 52 | 0.798776 | CGAAGACCAGGAATGTGCAC | 59.201 | 55.000 | 10.75 | 10.75 | 0.00 | 4.57 |
52 | 53 | 0.684535 | TCGAAGACCAGGAATGTGCA | 59.315 | 50.000 | 0.00 | 0.00 | 0.00 | 4.57 |
53 | 54 | 2.029838 | ATCGAAGACCAGGAATGTGC | 57.970 | 50.000 | 0.00 | 0.00 | 42.51 | 4.57 |
54 | 55 | 4.697514 | ACATATCGAAGACCAGGAATGTG | 58.302 | 43.478 | 0.00 | 0.00 | 42.51 | 3.21 |
55 | 56 | 4.405680 | TGACATATCGAAGACCAGGAATGT | 59.594 | 41.667 | 0.00 | 0.00 | 42.51 | 2.71 |
56 | 57 | 4.747108 | GTGACATATCGAAGACCAGGAATG | 59.253 | 45.833 | 0.00 | 0.00 | 42.51 | 2.67 |
57 | 58 | 4.499865 | CGTGACATATCGAAGACCAGGAAT | 60.500 | 45.833 | 0.00 | 0.00 | 42.51 | 3.01 |
58 | 59 | 3.181490 | CGTGACATATCGAAGACCAGGAA | 60.181 | 47.826 | 0.00 | 0.00 | 42.51 | 3.36 |
59 | 60 | 2.357952 | CGTGACATATCGAAGACCAGGA | 59.642 | 50.000 | 0.00 | 0.00 | 42.51 | 3.86 |
60 | 61 | 2.099263 | ACGTGACATATCGAAGACCAGG | 59.901 | 50.000 | 0.00 | 0.00 | 42.51 | 4.45 |
61 | 62 | 3.422417 | ACGTGACATATCGAAGACCAG | 57.578 | 47.619 | 0.00 | 0.00 | 42.51 | 4.00 |
62 | 63 | 3.242969 | GCTACGTGACATATCGAAGACCA | 60.243 | 47.826 | 0.00 | 0.00 | 42.51 | 4.02 |
63 | 64 | 3.242969 | TGCTACGTGACATATCGAAGACC | 60.243 | 47.826 | 0.00 | 0.00 | 42.51 | 3.85 |
64 | 65 | 3.948851 | TGCTACGTGACATATCGAAGAC | 58.051 | 45.455 | 0.00 | 0.00 | 42.51 | 3.01 |
65 | 66 | 4.830826 | ATGCTACGTGACATATCGAAGA | 57.169 | 40.909 | 0.00 | 0.00 | 45.75 | 2.87 |
66 | 67 | 5.059832 | GCTAATGCTACGTGACATATCGAAG | 59.940 | 44.000 | 0.00 | 0.00 | 36.03 | 3.79 |
67 | 68 | 4.915667 | GCTAATGCTACGTGACATATCGAA | 59.084 | 41.667 | 0.00 | 0.00 | 36.03 | 3.71 |
68 | 69 | 4.473199 | GCTAATGCTACGTGACATATCGA | 58.527 | 43.478 | 0.00 | 0.00 | 36.03 | 3.59 |
69 | 70 | 4.807754 | GCTAATGCTACGTGACATATCG | 57.192 | 45.455 | 0.00 | 0.00 | 36.03 | 2.92 |
86 | 87 | 8.846211 | GGCATGGATAAACAAAATAGTAGCTAA | 58.154 | 33.333 | 0.00 | 0.00 | 0.00 | 3.09 |
87 | 88 | 8.217799 | AGGCATGGATAAACAAAATAGTAGCTA | 58.782 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
88 | 89 | 7.013655 | CAGGCATGGATAAACAAAATAGTAGCT | 59.986 | 37.037 | 0.00 | 0.00 | 0.00 | 3.32 |
89 | 90 | 7.141363 | CAGGCATGGATAAACAAAATAGTAGC | 58.859 | 38.462 | 0.00 | 0.00 | 0.00 | 3.58 |
107 | 108 | 4.282957 | ACATATCTCTACTCACCAGGCATG | 59.717 | 45.833 | 0.00 | 0.00 | 0.00 | 4.06 |
108 | 109 | 4.487804 | ACATATCTCTACTCACCAGGCAT | 58.512 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
109 | 110 | 3.916035 | ACATATCTCTACTCACCAGGCA | 58.084 | 45.455 | 0.00 | 0.00 | 0.00 | 4.75 |
110 | 111 | 6.597832 | AATACATATCTCTACTCACCAGGC | 57.402 | 41.667 | 0.00 | 0.00 | 0.00 | 4.85 |
111 | 112 | 7.957002 | ACAAATACATATCTCTACTCACCAGG | 58.043 | 38.462 | 0.00 | 0.00 | 0.00 | 4.45 |
113 | 114 | 8.577296 | GCTACAAATACATATCTCTACTCACCA | 58.423 | 37.037 | 0.00 | 0.00 | 0.00 | 4.17 |
114 | 115 | 8.030106 | GGCTACAAATACATATCTCTACTCACC | 58.970 | 40.741 | 0.00 | 0.00 | 0.00 | 4.02 |
115 | 116 | 8.577296 | TGGCTACAAATACATATCTCTACTCAC | 58.423 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
116 | 117 | 8.706322 | TGGCTACAAATACATATCTCTACTCA | 57.294 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
119 | 120 | 9.522804 | GCTATGGCTACAAATACATATCTCTAC | 57.477 | 37.037 | 0.00 | 0.00 | 35.22 | 2.59 |
120 | 121 | 8.696374 | GGCTATGGCTACAAATACATATCTCTA | 58.304 | 37.037 | 0.00 | 0.00 | 38.73 | 2.43 |
121 | 122 | 7.365117 | GGGCTATGGCTACAAATACATATCTCT | 60.365 | 40.741 | 0.00 | 0.00 | 38.73 | 3.10 |
122 | 123 | 6.763610 | GGGCTATGGCTACAAATACATATCTC | 59.236 | 42.308 | 0.00 | 0.00 | 38.73 | 2.75 |
123 | 124 | 6.445139 | AGGGCTATGGCTACAAATACATATCT | 59.555 | 38.462 | 0.00 | 0.00 | 38.73 | 1.98 |
124 | 125 | 6.653989 | AGGGCTATGGCTACAAATACATATC | 58.346 | 40.000 | 0.00 | 0.00 | 38.73 | 1.63 |
125 | 126 | 6.642733 | AGGGCTATGGCTACAAATACATAT | 57.357 | 37.500 | 0.00 | 0.00 | 38.73 | 1.78 |
126 | 127 | 6.448369 | AAGGGCTATGGCTACAAATACATA | 57.552 | 37.500 | 0.00 | 0.00 | 38.73 | 2.29 |
127 | 128 | 5.324832 | AAGGGCTATGGCTACAAATACAT | 57.675 | 39.130 | 0.00 | 0.00 | 38.73 | 2.29 |
128 | 129 | 4.788925 | AAGGGCTATGGCTACAAATACA | 57.211 | 40.909 | 0.00 | 0.00 | 38.73 | 2.29 |
129 | 130 | 5.246307 | CCTAAGGGCTATGGCTACAAATAC | 58.754 | 45.833 | 0.00 | 0.00 | 38.73 | 1.89 |
130 | 131 | 4.288626 | CCCTAAGGGCTATGGCTACAAATA | 59.711 | 45.833 | 0.00 | 0.00 | 35.35 | 1.40 |
131 | 132 | 3.074538 | CCCTAAGGGCTATGGCTACAAAT | 59.925 | 47.826 | 0.00 | 0.00 | 35.35 | 2.32 |
132 | 133 | 2.441750 | CCCTAAGGGCTATGGCTACAAA | 59.558 | 50.000 | 0.00 | 0.00 | 35.35 | 2.83 |
133 | 134 | 2.054799 | CCCTAAGGGCTATGGCTACAA | 58.945 | 52.381 | 0.00 | 0.00 | 35.35 | 2.41 |
134 | 135 | 1.729586 | CCCTAAGGGCTATGGCTACA | 58.270 | 55.000 | 0.00 | 0.00 | 35.35 | 2.74 |
146 | 147 | 1.039233 | CCATGCTTGGTGCCCTAAGG | 61.039 | 60.000 | 10.48 | 0.00 | 42.00 | 2.69 |
147 | 148 | 0.034186 | TCCATGCTTGGTGCCCTAAG | 60.034 | 55.000 | 17.54 | 0.00 | 44.06 | 2.18 |
148 | 149 | 0.034186 | CTCCATGCTTGGTGCCCTAA | 60.034 | 55.000 | 17.54 | 0.00 | 44.06 | 2.69 |
149 | 150 | 1.609239 | CTCCATGCTTGGTGCCCTA | 59.391 | 57.895 | 17.54 | 0.00 | 44.06 | 3.53 |
150 | 151 | 2.357836 | CTCCATGCTTGGTGCCCT | 59.642 | 61.111 | 17.54 | 0.00 | 44.06 | 5.19 |
151 | 152 | 2.757099 | CCTCCATGCTTGGTGCCC | 60.757 | 66.667 | 17.54 | 0.00 | 44.06 | 5.36 |
152 | 153 | 2.757099 | CCCTCCATGCTTGGTGCC | 60.757 | 66.667 | 17.54 | 0.00 | 44.06 | 5.01 |
153 | 154 | 2.757099 | CCCCTCCATGCTTGGTGC | 60.757 | 66.667 | 17.54 | 0.00 | 44.06 | 5.01 |
154 | 155 | 1.379044 | GTCCCCTCCATGCTTGGTG | 60.379 | 63.158 | 17.54 | 14.90 | 44.06 | 4.17 |
155 | 156 | 1.142688 | AAGTCCCCTCCATGCTTGGT | 61.143 | 55.000 | 17.54 | 0.00 | 44.06 | 3.67 |
156 | 157 | 0.682209 | CAAGTCCCCTCCATGCTTGG | 60.682 | 60.000 | 12.41 | 12.41 | 45.15 | 3.61 |
157 | 158 | 0.038744 | ACAAGTCCCCTCCATGCTTG | 59.961 | 55.000 | 5.70 | 5.70 | 41.40 | 4.01 |
158 | 159 | 0.038744 | CACAAGTCCCCTCCATGCTT | 59.961 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
159 | 160 | 1.136329 | ACACAAGTCCCCTCCATGCT | 61.136 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
160 | 161 | 0.618458 | TACACAAGTCCCCTCCATGC | 59.382 | 55.000 | 0.00 | 0.00 | 0.00 | 4.06 |
161 | 162 | 2.039746 | TGTTACACAAGTCCCCTCCATG | 59.960 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
162 | 163 | 2.344592 | TGTTACACAAGTCCCCTCCAT | 58.655 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
163 | 164 | 1.809133 | TGTTACACAAGTCCCCTCCA | 58.191 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
164 | 165 | 4.563140 | TTATGTTACACAAGTCCCCTCC | 57.437 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
165 | 166 | 6.053650 | GGTATTATGTTACACAAGTCCCCTC | 58.946 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
166 | 167 | 5.489637 | TGGTATTATGTTACACAAGTCCCCT | 59.510 | 40.000 | 0.00 | 0.00 | 0.00 | 4.79 |
167 | 168 | 5.747342 | TGGTATTATGTTACACAAGTCCCC | 58.253 | 41.667 | 0.00 | 0.00 | 0.00 | 4.81 |
168 | 169 | 6.646267 | TCTGGTATTATGTTACACAAGTCCC | 58.354 | 40.000 | 0.00 | 0.00 | 0.00 | 4.46 |
169 | 170 | 8.732746 | ATTCTGGTATTATGTTACACAAGTCC | 57.267 | 34.615 | 0.00 | 0.00 | 0.00 | 3.85 |
180 | 181 | 9.631257 | TCATGACATGAAATTCTGGTATTATGT | 57.369 | 29.630 | 15.83 | 0.00 | 36.11 | 2.29 |
181 | 182 | 9.888878 | GTCATGACATGAAATTCTGGTATTATG | 57.111 | 33.333 | 21.07 | 0.00 | 41.69 | 1.90 |
182 | 183 | 9.631257 | TGTCATGACATGAAATTCTGGTATTAT | 57.369 | 29.630 | 24.56 | 0.00 | 41.69 | 1.28 |
183 | 184 | 8.892723 | GTGTCATGACATGAAATTCTGGTATTA | 58.107 | 33.333 | 30.10 | 0.00 | 43.97 | 0.98 |
184 | 185 | 7.394077 | TGTGTCATGACATGAAATTCTGGTATT | 59.606 | 33.333 | 30.10 | 0.00 | 43.97 | 1.89 |
185 | 186 | 6.885918 | TGTGTCATGACATGAAATTCTGGTAT | 59.114 | 34.615 | 30.10 | 0.00 | 43.97 | 2.73 |
186 | 187 | 6.237154 | TGTGTCATGACATGAAATTCTGGTA | 58.763 | 36.000 | 30.10 | 0.04 | 43.97 | 3.25 |
187 | 188 | 5.072055 | TGTGTCATGACATGAAATTCTGGT | 58.928 | 37.500 | 30.10 | 0.00 | 43.97 | 4.00 |
188 | 189 | 5.632244 | TGTGTCATGACATGAAATTCTGG | 57.368 | 39.130 | 30.10 | 0.00 | 43.97 | 3.86 |
200 | 201 | 4.754372 | ATGTGTTGTCATGTGTCATGAC | 57.246 | 40.909 | 26.15 | 26.15 | 46.28 | 3.06 |
201 | 202 | 5.771153 | AAATGTGTTGTCATGTGTCATGA | 57.229 | 34.783 | 8.14 | 8.14 | 0.00 | 3.07 |
202 | 203 | 6.210796 | AGAAAATGTGTTGTCATGTGTCATG | 58.789 | 36.000 | 3.65 | 3.65 | 0.00 | 3.07 |
203 | 204 | 6.263842 | AGAGAAAATGTGTTGTCATGTGTCAT | 59.736 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
204 | 205 | 5.589855 | AGAGAAAATGTGTTGTCATGTGTCA | 59.410 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
205 | 206 | 6.064846 | AGAGAAAATGTGTTGTCATGTGTC | 57.935 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
206 | 207 | 6.293626 | GCTAGAGAAAATGTGTTGTCATGTGT | 60.294 | 38.462 | 0.00 | 0.00 | 0.00 | 3.72 |
207 | 208 | 6.072838 | AGCTAGAGAAAATGTGTTGTCATGTG | 60.073 | 38.462 | 0.00 | 0.00 | 0.00 | 3.21 |
208 | 209 | 6.000219 | AGCTAGAGAAAATGTGTTGTCATGT | 59.000 | 36.000 | 0.00 | 0.00 | 0.00 | 3.21 |
209 | 210 | 6.492007 | AGCTAGAGAAAATGTGTTGTCATG | 57.508 | 37.500 | 0.00 | 0.00 | 0.00 | 3.07 |
210 | 211 | 8.043113 | TCATAGCTAGAGAAAATGTGTTGTCAT | 58.957 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
211 | 212 | 7.386059 | TCATAGCTAGAGAAAATGTGTTGTCA | 58.614 | 34.615 | 0.00 | 0.00 | 0.00 | 3.58 |
212 | 213 | 7.834068 | TCATAGCTAGAGAAAATGTGTTGTC | 57.166 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
213 | 214 | 8.263640 | AGATCATAGCTAGAGAAAATGTGTTGT | 58.736 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
214 | 215 | 8.659925 | AGATCATAGCTAGAGAAAATGTGTTG | 57.340 | 34.615 | 0.00 | 0.00 | 0.00 | 3.33 |
215 | 216 | 8.481314 | TGAGATCATAGCTAGAGAAAATGTGTT | 58.519 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
216 | 217 | 8.016301 | TGAGATCATAGCTAGAGAAAATGTGT | 57.984 | 34.615 | 0.00 | 0.00 | 0.00 | 3.72 |
217 | 218 | 8.763356 | GTTGAGATCATAGCTAGAGAAAATGTG | 58.237 | 37.037 | 0.00 | 0.00 | 0.00 | 3.21 |
218 | 219 | 8.481314 | TGTTGAGATCATAGCTAGAGAAAATGT | 58.519 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
219 | 220 | 8.883954 | TGTTGAGATCATAGCTAGAGAAAATG | 57.116 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
220 | 221 | 9.323985 | GTTGTTGAGATCATAGCTAGAGAAAAT | 57.676 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
221 | 222 | 7.766278 | GGTTGTTGAGATCATAGCTAGAGAAAA | 59.234 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
222 | 223 | 7.268586 | GGTTGTTGAGATCATAGCTAGAGAAA | 58.731 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
223 | 224 | 6.183360 | GGGTTGTTGAGATCATAGCTAGAGAA | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 2.87 |
224 | 225 | 5.303078 | GGGTTGTTGAGATCATAGCTAGAGA | 59.697 | 44.000 | 0.00 | 0.00 | 0.00 | 3.10 |
225 | 226 | 5.304101 | AGGGTTGTTGAGATCATAGCTAGAG | 59.696 | 44.000 | 0.00 | 0.00 | 0.00 | 2.43 |
226 | 227 | 5.211973 | AGGGTTGTTGAGATCATAGCTAGA | 58.788 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
227 | 228 | 5.543507 | AGGGTTGTTGAGATCATAGCTAG | 57.456 | 43.478 | 0.00 | 0.00 | 0.00 | 3.42 |
228 | 229 | 6.014242 | CCATAGGGTTGTTGAGATCATAGCTA | 60.014 | 42.308 | 0.00 | 0.00 | 0.00 | 3.32 |
229 | 230 | 5.221803 | CCATAGGGTTGTTGAGATCATAGCT | 60.222 | 44.000 | 0.00 | 0.00 | 0.00 | 3.32 |
230 | 231 | 4.999950 | CCATAGGGTTGTTGAGATCATAGC | 59.000 | 45.833 | 0.00 | 0.00 | 0.00 | 2.97 |
231 | 232 | 4.999950 | GCCATAGGGTTGTTGAGATCATAG | 59.000 | 45.833 | 0.00 | 0.00 | 36.17 | 2.23 |
232 | 233 | 4.660303 | AGCCATAGGGTTGTTGAGATCATA | 59.340 | 41.667 | 0.00 | 0.00 | 36.17 | 2.15 |
233 | 234 | 3.461085 | AGCCATAGGGTTGTTGAGATCAT | 59.539 | 43.478 | 0.00 | 0.00 | 36.17 | 2.45 |
234 | 235 | 2.846206 | AGCCATAGGGTTGTTGAGATCA | 59.154 | 45.455 | 0.00 | 0.00 | 36.17 | 2.92 |
235 | 236 | 3.118261 | TGAGCCATAGGGTTGTTGAGATC | 60.118 | 47.826 | 0.00 | 0.00 | 36.17 | 2.75 |
236 | 237 | 2.846206 | TGAGCCATAGGGTTGTTGAGAT | 59.154 | 45.455 | 0.00 | 0.00 | 36.17 | 2.75 |
237 | 238 | 2.237143 | CTGAGCCATAGGGTTGTTGAGA | 59.763 | 50.000 | 0.00 | 0.00 | 36.17 | 3.27 |
238 | 239 | 2.026822 | ACTGAGCCATAGGGTTGTTGAG | 60.027 | 50.000 | 0.00 | 0.00 | 36.17 | 3.02 |
239 | 240 | 1.985159 | ACTGAGCCATAGGGTTGTTGA | 59.015 | 47.619 | 0.00 | 0.00 | 36.17 | 3.18 |
240 | 241 | 2.496899 | ACTGAGCCATAGGGTTGTTG | 57.503 | 50.000 | 0.00 | 0.00 | 36.17 | 3.33 |
241 | 242 | 2.238898 | GGTACTGAGCCATAGGGTTGTT | 59.761 | 50.000 | 0.00 | 0.00 | 36.17 | 2.83 |
242 | 243 | 1.838077 | GGTACTGAGCCATAGGGTTGT | 59.162 | 52.381 | 0.00 | 0.00 | 36.17 | 3.32 |
243 | 244 | 1.837439 | TGGTACTGAGCCATAGGGTTG | 59.163 | 52.381 | 0.00 | 0.00 | 36.17 | 3.77 |
244 | 245 | 2.119495 | CTGGTACTGAGCCATAGGGTT | 58.881 | 52.381 | 0.00 | 0.00 | 35.19 | 4.11 |
245 | 246 | 1.291033 | TCTGGTACTGAGCCATAGGGT | 59.709 | 52.381 | 0.00 | 0.00 | 35.19 | 4.34 |
246 | 247 | 1.689273 | GTCTGGTACTGAGCCATAGGG | 59.311 | 57.143 | 0.00 | 0.00 | 36.86 | 3.53 |
247 | 248 | 2.672098 | AGTCTGGTACTGAGCCATAGG | 58.328 | 52.381 | 0.00 | 0.00 | 36.93 | 2.57 |
248 | 249 | 4.744795 | AAAGTCTGGTACTGAGCCATAG | 57.255 | 45.455 | 0.00 | 0.00 | 38.88 | 2.23 |
249 | 250 | 6.156256 | ACAATAAAGTCTGGTACTGAGCCATA | 59.844 | 38.462 | 0.00 | 0.00 | 38.88 | 2.74 |
250 | 251 | 5.045578 | ACAATAAAGTCTGGTACTGAGCCAT | 60.046 | 40.000 | 0.00 | 0.00 | 38.88 | 4.40 |
251 | 252 | 4.286032 | ACAATAAAGTCTGGTACTGAGCCA | 59.714 | 41.667 | 0.00 | 0.00 | 38.88 | 4.75 |
252 | 253 | 4.833390 | ACAATAAAGTCTGGTACTGAGCC | 58.167 | 43.478 | 0.00 | 0.00 | 38.88 | 4.70 |
253 | 254 | 7.265673 | TCATACAATAAAGTCTGGTACTGAGC | 58.734 | 38.462 | 0.00 | 0.00 | 38.88 | 4.26 |
254 | 255 | 9.254133 | CATCATACAATAAAGTCTGGTACTGAG | 57.746 | 37.037 | 0.00 | 0.00 | 38.88 | 3.35 |
255 | 256 | 7.710907 | GCATCATACAATAAAGTCTGGTACTGA | 59.289 | 37.037 | 0.00 | 0.00 | 38.88 | 3.41 |
256 | 257 | 7.712639 | AGCATCATACAATAAAGTCTGGTACTG | 59.287 | 37.037 | 0.00 | 0.00 | 38.88 | 2.74 |
257 | 258 | 7.796054 | AGCATCATACAATAAAGTCTGGTACT | 58.204 | 34.615 | 0.00 | 0.00 | 41.49 | 2.73 |
258 | 259 | 8.438676 | AAGCATCATACAATAAAGTCTGGTAC | 57.561 | 34.615 | 0.00 | 0.00 | 0.00 | 3.34 |
259 | 260 | 7.715249 | GGAAGCATCATACAATAAAGTCTGGTA | 59.285 | 37.037 | 0.00 | 0.00 | 0.00 | 3.25 |
260 | 261 | 6.543831 | GGAAGCATCATACAATAAAGTCTGGT | 59.456 | 38.462 | 0.00 | 0.00 | 0.00 | 4.00 |
261 | 262 | 6.293081 | CGGAAGCATCATACAATAAAGTCTGG | 60.293 | 42.308 | 0.00 | 0.00 | 0.00 | 3.86 |
262 | 263 | 6.653183 | CGGAAGCATCATACAATAAAGTCTG | 58.347 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
263 | 264 | 6.851222 | CGGAAGCATCATACAATAAAGTCT | 57.149 | 37.500 | 0.00 | 0.00 | 0.00 | 3.24 |
281 | 282 | 1.929836 | GCTGTCAAGACATAGCGGAAG | 59.070 | 52.381 | 3.01 | 0.00 | 41.01 | 3.46 |
282 | 283 | 1.275010 | TGCTGTCAAGACATAGCGGAA | 59.725 | 47.619 | 3.01 | 0.00 | 41.01 | 4.30 |
283 | 284 | 0.894835 | TGCTGTCAAGACATAGCGGA | 59.105 | 50.000 | 3.01 | 0.00 | 41.01 | 5.54 |
292 | 293 | 5.335897 | GCAAGGAAATGTATTGCTGTCAAGA | 60.336 | 40.000 | 2.07 | 0.00 | 44.57 | 3.02 |
314 | 315 | 3.181470 | TGTTACAAGAGTGCTAGTGTGCA | 60.181 | 43.478 | 0.00 | 0.00 | 41.05 | 4.57 |
378 | 696 | 3.610669 | CGCTGGGGGAGAGGATCG | 61.611 | 72.222 | 0.00 | 0.00 | 42.67 | 3.69 |
383 | 1062 | 1.414061 | ATTCATCCGCTGGGGGAGAG | 61.414 | 60.000 | 11.17 | 7.37 | 40.02 | 3.20 |
388 | 1067 | 1.185315 | AAAACATTCATCCGCTGGGG | 58.815 | 50.000 | 4.03 | 4.03 | 37.02 | 4.96 |
432 | 1116 | 4.611355 | CGTCGTCTTTCTCATGCACAAATT | 60.611 | 41.667 | 0.00 | 0.00 | 0.00 | 1.82 |
481 | 1178 | 3.355378 | CAGCTTGGGGATGTCATGTTTA | 58.645 | 45.455 | 0.00 | 0.00 | 0.00 | 2.01 |
496 | 1193 | 0.961857 | TGGCAGCACATACCAGCTTG | 60.962 | 55.000 | 0.00 | 0.00 | 39.50 | 4.01 |
507 | 1370 | 2.005451 | CTACTCTTGACATGGCAGCAC | 58.995 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
625 | 1490 | 5.825151 | AGTTTTCTCCTTCCTCTTTGAGTTG | 59.175 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
627 | 1492 | 5.616270 | GAGTTTTCTCCTTCCTCTTTGAGT | 58.384 | 41.667 | 0.00 | 0.00 | 40.79 | 3.41 |
709 | 1579 | 8.679725 | AGAGGATGTAGGTAAGAAGATATACCA | 58.320 | 37.037 | 4.91 | 0.00 | 43.32 | 3.25 |
710 | 1580 | 9.536510 | AAGAGGATGTAGGTAAGAAGATATACC | 57.463 | 37.037 | 0.00 | 0.00 | 41.58 | 2.73 |
809 | 1721 | 8.727100 | AGGAACTGACTATATTATCCATGTGA | 57.273 | 34.615 | 0.00 | 0.00 | 37.18 | 3.58 |
812 | 1724 | 8.976353 | AGCTAGGAACTGACTATATTATCCATG | 58.024 | 37.037 | 0.00 | 0.00 | 41.52 | 3.66 |
834 | 1767 | 0.255890 | GTTGGCATGGAGGGAAGCTA | 59.744 | 55.000 | 0.00 | 0.00 | 0.00 | 3.32 |
923 | 1862 | 2.144078 | TCTCGTTGTGGGGAGGCAA | 61.144 | 57.895 | 0.00 | 0.00 | 0.00 | 4.52 |
924 | 1863 | 2.525629 | TCTCGTTGTGGGGAGGCA | 60.526 | 61.111 | 0.00 | 0.00 | 0.00 | 4.75 |
939 | 1881 | 5.834204 | AGCTACTTTAATGGAGATACGGTCT | 59.166 | 40.000 | 4.78 | 0.00 | 40.81 | 3.85 |
964 | 1922 | 4.390297 | ACTCGTAAAAATGCAAGCTCTCTC | 59.610 | 41.667 | 0.00 | 0.00 | 0.00 | 3.20 |
965 | 1923 | 4.319177 | ACTCGTAAAAATGCAAGCTCTCT | 58.681 | 39.130 | 0.00 | 0.00 | 0.00 | 3.10 |
982 | 1940 | 1.306642 | ATCTCGCAACCTCGACTCGT | 61.307 | 55.000 | 0.00 | 0.00 | 34.46 | 4.18 |
1141 | 2118 | 4.070552 | GAGGAGCCGCACGAAGGT | 62.071 | 66.667 | 0.00 | 0.00 | 0.00 | 3.50 |
1206 | 2183 | 2.839486 | TATGGCGGATGATGAACTCC | 57.161 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1230 | 2207 | 6.715347 | ATATTTTCCCAATCAACAGTAGGC | 57.285 | 37.500 | 0.00 | 0.00 | 0.00 | 3.93 |
1245 | 2243 | 7.145932 | ACTGCACTGTTTCAGTATATTTTCC | 57.854 | 36.000 | 9.84 | 0.00 | 43.43 | 3.13 |
1271 | 2277 | 7.311364 | TCTTTTTATTACATCCGTTACAGGC | 57.689 | 36.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1289 | 2295 | 5.011023 | CCCTTACTTCCTGCACATTCTTTTT | 59.989 | 40.000 | 0.00 | 0.00 | 0.00 | 1.94 |
1294 | 2300 | 3.055094 | TCTCCCTTACTTCCTGCACATTC | 60.055 | 47.826 | 0.00 | 0.00 | 0.00 | 2.67 |
1367 | 2373 | 2.958355 | CTCTCCTCACCTTCCTCATCTC | 59.042 | 54.545 | 0.00 | 0.00 | 0.00 | 2.75 |
1462 | 2468 | 0.772124 | TCCAGCCAGAAGGGAGGTTT | 60.772 | 55.000 | 0.00 | 0.00 | 40.01 | 3.27 |
1463 | 2469 | 1.151810 | TCCAGCCAGAAGGGAGGTT | 60.152 | 57.895 | 0.00 | 0.00 | 40.01 | 3.50 |
1464 | 2470 | 1.920835 | GTCCAGCCAGAAGGGAGGT | 60.921 | 63.158 | 0.00 | 0.00 | 40.01 | 3.85 |
1465 | 2471 | 1.492133 | TTGTCCAGCCAGAAGGGAGG | 61.492 | 60.000 | 0.00 | 0.00 | 40.01 | 4.30 |
1466 | 2472 | 0.622665 | ATTGTCCAGCCAGAAGGGAG | 59.377 | 55.000 | 0.00 | 0.00 | 40.01 | 4.30 |
1477 | 2483 | 3.567164 | GCCTCCATATTGTCATTGTCCAG | 59.433 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
1478 | 2484 | 3.202818 | AGCCTCCATATTGTCATTGTCCA | 59.797 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
1479 | 2485 | 3.817647 | GAGCCTCCATATTGTCATTGTCC | 59.182 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
1480 | 2486 | 4.712476 | AGAGCCTCCATATTGTCATTGTC | 58.288 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
1481 | 2487 | 4.785346 | AGAGCCTCCATATTGTCATTGT | 57.215 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
1601 | 2665 | 5.567534 | GTGTACTCTGTTTTGTGTTTGTGTG | 59.432 | 40.000 | 0.00 | 0.00 | 0.00 | 3.82 |
1611 | 2675 | 3.555956 | AGCTTGTCGTGTACTCTGTTTTG | 59.444 | 43.478 | 0.00 | 0.00 | 0.00 | 2.44 |
1643 | 2707 | 6.738649 | GCGTACAAGCTTTTTCTATGAGAAAG | 59.261 | 38.462 | 0.00 | 6.31 | 44.14 | 2.62 |
1659 | 2723 | 1.956620 | GCAGGTCGAAGCGTACAAGC | 61.957 | 60.000 | 0.00 | 0.00 | 37.41 | 4.01 |
1660 | 2724 | 0.666274 | TGCAGGTCGAAGCGTACAAG | 60.666 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1682 | 2762 | 3.398318 | TGGGCTGAATGGAGACTAGTA | 57.602 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
1713 | 2876 | 3.391049 | GTGTGGAGAAAAGCTACGACTT | 58.609 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
1778 | 2941 | 9.653067 | CGTATATACTGTGTTTTCAACAAACAA | 57.347 | 29.630 | 11.05 | 0.00 | 44.16 | 2.83 |
1779 | 2942 | 7.799447 | GCGTATATACTGTGTTTTCAACAAACA | 59.201 | 33.333 | 11.05 | 0.00 | 44.16 | 2.83 |
1780 | 2943 | 7.799447 | TGCGTATATACTGTGTTTTCAACAAAC | 59.201 | 33.333 | 11.05 | 0.00 | 44.16 | 2.93 |
1781 | 2944 | 7.862648 | TGCGTATATACTGTGTTTTCAACAAA | 58.137 | 30.769 | 11.05 | 0.00 | 44.16 | 2.83 |
1782 | 2945 | 7.422878 | TGCGTATATACTGTGTTTTCAACAA | 57.577 | 32.000 | 11.05 | 0.00 | 44.16 | 2.83 |
1783 | 2946 | 7.385478 | TCTTGCGTATATACTGTGTTTTCAACA | 59.615 | 33.333 | 11.05 | 0.00 | 39.52 | 3.33 |
1784 | 2947 | 7.735500 | TCTTGCGTATATACTGTGTTTTCAAC | 58.264 | 34.615 | 11.05 | 0.00 | 0.00 | 3.18 |
1785 | 2948 | 7.892778 | TCTTGCGTATATACTGTGTTTTCAA | 57.107 | 32.000 | 11.05 | 3.41 | 0.00 | 2.69 |
1786 | 2949 | 7.762159 | TGATCTTGCGTATATACTGTGTTTTCA | 59.238 | 33.333 | 11.05 | 3.90 | 0.00 | 2.69 |
1787 | 2950 | 8.126871 | TGATCTTGCGTATATACTGTGTTTTC | 57.873 | 34.615 | 11.05 | 1.67 | 0.00 | 2.29 |
1788 | 2951 | 8.662781 | ATGATCTTGCGTATATACTGTGTTTT | 57.337 | 30.769 | 11.05 | 0.00 | 0.00 | 2.43 |
1789 | 2952 | 8.551205 | CAATGATCTTGCGTATATACTGTGTTT | 58.449 | 33.333 | 11.05 | 0.00 | 0.00 | 2.83 |
1790 | 2953 | 7.926018 | TCAATGATCTTGCGTATATACTGTGTT | 59.074 | 33.333 | 11.05 | 0.00 | 0.00 | 3.32 |
1791 | 2954 | 7.433680 | TCAATGATCTTGCGTATATACTGTGT | 58.566 | 34.615 | 11.05 | 0.00 | 0.00 | 3.72 |
1792 | 2955 | 7.873739 | TCAATGATCTTGCGTATATACTGTG | 57.126 | 36.000 | 11.05 | 0.00 | 0.00 | 3.66 |
1793 | 2956 | 7.926018 | TGTTCAATGATCTTGCGTATATACTGT | 59.074 | 33.333 | 11.05 | 0.00 | 0.00 | 3.55 |
1794 | 2957 | 8.298030 | TGTTCAATGATCTTGCGTATATACTG | 57.702 | 34.615 | 11.05 | 5.95 | 0.00 | 2.74 |
1795 | 2958 | 9.144747 | GATGTTCAATGATCTTGCGTATATACT | 57.855 | 33.333 | 11.05 | 0.00 | 0.00 | 2.12 |
1796 | 2959 | 9.144747 | AGATGTTCAATGATCTTGCGTATATAC | 57.855 | 33.333 | 2.53 | 2.53 | 0.00 | 1.47 |
1798 | 2961 | 9.363763 | CTAGATGTTCAATGATCTTGCGTATAT | 57.636 | 33.333 | 0.00 | 0.00 | 31.29 | 0.86 |
1799 | 2962 | 8.360390 | ACTAGATGTTCAATGATCTTGCGTATA | 58.640 | 33.333 | 0.00 | 0.00 | 31.29 | 1.47 |
1800 | 2963 | 7.170489 | CACTAGATGTTCAATGATCTTGCGTAT | 59.830 | 37.037 | 0.00 | 0.00 | 31.29 | 3.06 |
1801 | 2964 | 6.476706 | CACTAGATGTTCAATGATCTTGCGTA | 59.523 | 38.462 | 0.00 | 0.00 | 31.29 | 4.42 |
1802 | 2965 | 5.292834 | CACTAGATGTTCAATGATCTTGCGT | 59.707 | 40.000 | 0.00 | 0.00 | 31.29 | 5.24 |
1803 | 2966 | 5.735324 | CACTAGATGTTCAATGATCTTGCG | 58.265 | 41.667 | 0.00 | 0.00 | 31.29 | 4.85 |
1804 | 2967 | 5.296283 | AGCACTAGATGTTCAATGATCTTGC | 59.704 | 40.000 | 0.00 | 0.00 | 34.63 | 4.01 |
2018 | 3205 | 1.668294 | CAGCACTTCCTCGTCCACT | 59.332 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
2048 | 3235 | 1.900498 | GGTGCCATAGGAGCCATGC | 60.900 | 63.158 | 0.00 | 0.00 | 0.00 | 4.06 |
2065 | 3252 | 1.753073 | CCTTAAAATGCCCTGCTCTGG | 59.247 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
2271 | 3469 | 6.990349 | CCATCGAAACCTGTACCTACAATTAT | 59.010 | 38.462 | 0.00 | 0.00 | 35.50 | 1.28 |
2284 | 3902 | 3.195661 | GGTAAGTAGCCATCGAAACCTG | 58.804 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2387 | 4009 | 7.711846 | TGCATGCTACTGTTTTCTTTAAAAGA | 58.288 | 30.769 | 20.33 | 0.00 | 35.29 | 2.52 |
2388 | 4010 | 7.928908 | TGCATGCTACTGTTTTCTTTAAAAG | 57.071 | 32.000 | 20.33 | 0.00 | 35.29 | 2.27 |
2392 | 4015 | 7.754924 | GCTTTATGCATGCTACTGTTTTCTTTA | 59.245 | 33.333 | 20.33 | 0.00 | 42.31 | 1.85 |
2395 | 4018 | 5.644644 | GCTTTATGCATGCTACTGTTTTCT | 58.355 | 37.500 | 20.33 | 0.00 | 42.31 | 2.52 |
2411 | 4034 | 6.264832 | TGTGTCTTGTTGTCTTTGCTTTATG | 58.735 | 36.000 | 0.00 | 0.00 | 0.00 | 1.90 |
2464 | 4087 | 5.009510 | TGAAGGCAAAAGATGATCGTTTTCA | 59.990 | 36.000 | 3.61 | 3.32 | 0.00 | 2.69 |
2523 | 4146 | 2.766345 | TCCGCTTACCACCGTTTTAT | 57.234 | 45.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2526 | 4149 | 0.604511 | CCTTCCGCTTACCACCGTTT | 60.605 | 55.000 | 0.00 | 0.00 | 0.00 | 3.60 |
2541 | 4164 | 2.575461 | GCTTGCATGTGGCCCTTC | 59.425 | 61.111 | 0.00 | 0.00 | 43.89 | 3.46 |
2547 | 4170 | 3.818787 | GAGGGCGCTTGCATGTGG | 61.819 | 66.667 | 7.64 | 2.44 | 41.71 | 4.17 |
2600 | 4223 | 3.069729 | GTCCTGATATGGTTTCTAGCGGT | 59.930 | 47.826 | 0.00 | 0.00 | 0.00 | 5.68 |
2603 | 4226 | 5.918608 | TCAAGTCCTGATATGGTTTCTAGC | 58.081 | 41.667 | 0.00 | 0.00 | 0.00 | 3.42 |
2612 | 4235 | 4.115516 | CACGGTCTTCAAGTCCTGATATG | 58.884 | 47.826 | 0.00 | 0.00 | 32.78 | 1.78 |
2657 | 4280 | 5.353123 | TCACACACAACTCAAGTTTTCTACC | 59.647 | 40.000 | 0.00 | 0.00 | 35.83 | 3.18 |
2666 | 4289 | 3.100817 | CGCTTTTCACACACAACTCAAG | 58.899 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
2696 | 4319 | 4.335315 | GCGAAGTATCATGGTTTCCAATGA | 59.665 | 41.667 | 0.00 | 0.00 | 36.95 | 2.57 |
2701 | 4324 | 1.597663 | CGGCGAAGTATCATGGTTTCC | 59.402 | 52.381 | 0.00 | 0.00 | 0.00 | 3.13 |
2708 | 4331 | 2.138320 | CATTCTGCGGCGAAGTATCAT | 58.862 | 47.619 | 15.80 | 0.36 | 0.00 | 2.45 |
2777 | 4423 | 6.715344 | TTCGTAAAAATGTGAGAGCGTTAT | 57.285 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
2781 | 4427 | 4.148891 | GGTTTCGTAAAAATGTGAGAGCG | 58.851 | 43.478 | 0.00 | 0.00 | 0.00 | 5.03 |
2842 | 4488 | 4.449743 | ACGTGCAAACTAGCTTCGAAATTA | 59.550 | 37.500 | 0.00 | 0.00 | 36.78 | 1.40 |
2855 | 7219 | 4.911514 | AGTTCCAAATAACGTGCAAACT | 57.088 | 36.364 | 0.00 | 0.00 | 34.46 | 2.66 |
2863 | 7227 | 5.526010 | ACGCTCTTTAGTTCCAAATAACG | 57.474 | 39.130 | 0.00 | 0.00 | 34.46 | 3.18 |
2877 | 7241 | 7.466725 | GCAATTAAAAAGGGAAAAACGCTCTTT | 60.467 | 33.333 | 0.00 | 0.00 | 40.92 | 2.52 |
2889 | 7253 | 7.619302 | ACTGATTATCCAGCAATTAAAAAGGGA | 59.381 | 33.333 | 0.00 | 0.00 | 37.68 | 4.20 |
2908 | 7272 | 7.232534 | ACCTTTTGTCCAGCAATTAACTGATTA | 59.767 | 33.333 | 8.80 | 0.00 | 37.32 | 1.75 |
2920 | 7284 | 0.257328 | TGGTCACCTTTTGTCCAGCA | 59.743 | 50.000 | 0.00 | 0.00 | 38.37 | 4.41 |
2921 | 7285 | 1.398692 | TTGGTCACCTTTTGTCCAGC | 58.601 | 50.000 | 0.00 | 0.00 | 43.32 | 4.85 |
2922 | 7286 | 4.670896 | AATTTGGTCACCTTTTGTCCAG | 57.329 | 40.909 | 0.00 | 0.00 | 43.32 | 3.86 |
2924 | 7288 | 5.017294 | TGAAATTTGGTCACCTTTTGTCC | 57.983 | 39.130 | 0.00 | 0.00 | 34.20 | 4.02 |
2945 | 7324 | 2.093869 | CACCTTTGGAAATCCCATGCTG | 60.094 | 50.000 | 0.00 | 0.00 | 46.10 | 4.41 |
3006 | 7385 | 7.174253 | TGACCATATTGTCTTGGTTGTCTTTAC | 59.826 | 37.037 | 8.29 | 0.00 | 46.14 | 2.01 |
3011 | 7390 | 5.003804 | AGTGACCATATTGTCTTGGTTGTC | 58.996 | 41.667 | 8.29 | 0.00 | 46.14 | 3.18 |
3018 | 7397 | 8.859090 | TCAATTTTGAAGTGACCATATTGTCTT | 58.141 | 29.630 | 8.29 | 0.00 | 33.67 | 3.01 |
3020 | 7399 | 9.474920 | TTTCAATTTTGAAGTGACCATATTGTC | 57.525 | 29.630 | 5.92 | 0.00 | 46.68 | 3.18 |
3027 | 7406 | 9.311916 | CTATGTTTTTCAATTTTGAAGTGACCA | 57.688 | 29.630 | 5.92 | 2.14 | 46.68 | 4.02 |
3075 | 7454 | 4.089239 | TAGCATTGACGGGCGGCA | 62.089 | 61.111 | 12.47 | 0.00 | 34.54 | 5.69 |
3077 | 7456 | 2.895372 | GGTAGCATTGACGGGCGG | 60.895 | 66.667 | 0.00 | 0.00 | 34.54 | 6.13 |
3097 | 7476 | 0.617249 | TTTGGGATGGGGAATGGTGC | 60.617 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
3102 | 7481 | 4.697798 | TCTGAAATTTTGGGATGGGGAAT | 58.302 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
3108 | 7487 | 5.105595 | GGGAGTTCTCTGAAATTTTGGGATG | 60.106 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3113 | 7492 | 5.334414 | CGAGTGGGAGTTCTCTGAAATTTTG | 60.334 | 44.000 | 0.00 | 0.00 | 0.00 | 2.44 |
3131 | 7510 | 3.065371 | GCCAAATCAAATAGGTCGAGTGG | 59.935 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
3159 | 7538 | 2.698797 | TCTATTCCTAGTCCGGGCTTTG | 59.301 | 50.000 | 17.04 | 7.97 | 0.00 | 2.77 |
3168 | 7547 | 2.623889 | TCGCTGCCTTCTATTCCTAGTC | 59.376 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
3178 | 7557 | 1.133450 | TCCTATAGGTCGCTGCCTTCT | 60.133 | 52.381 | 18.51 | 0.00 | 39.94 | 2.85 |
3185 | 7564 | 2.309162 | TCTATGGCTCCTATAGGTCGCT | 59.691 | 50.000 | 24.69 | 14.68 | 36.34 | 4.93 |
3214 | 7594 | 1.892819 | CGACATGAGCTCACCTGGGT | 61.893 | 60.000 | 20.97 | 12.22 | 0.00 | 4.51 |

Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.