Multiple sequence alignment - TraesCS7D01G540500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7D01G540500 chr7D 100.000 5189 0 0 1 5189 630501889 630507077 0.000000e+00 9583.0
1 TraesCS7D01G540500 chr7D 95.180 2448 93 13 2194 4617 630274888 630277334 0.000000e+00 3843.0
2 TraesCS7D01G540500 chr7D 83.178 2247 304 37 1011 3227 630253305 630255507 0.000000e+00 1988.0
3 TraesCS7D01G540500 chr7D 92.404 882 46 7 697 1573 630272562 630273427 0.000000e+00 1238.0
4 TraesCS7D01G540500 chr7D 83.800 500 67 12 2734 3227 630489833 630490324 3.660000e-126 462.0
5 TraesCS7D01G540500 chr7D 91.318 311 25 2 3303 3612 630266999 630267308 1.730000e-114 424.0
6 TraesCS7D01G540500 chr7D 80.600 433 73 10 4191 4617 564175236 564175663 1.800000e-84 324.0
7 TraesCS7D01G540500 chr7D 94.309 123 7 0 385 507 630270486 630270608 6.860000e-44 189.0
8 TraesCS7D01G540500 chr7D 86.957 138 13 2 526 658 630270600 630270737 3.240000e-32 150.0
9 TraesCS7D01G540500 chr7D 90.654 107 5 3 231 333 630270374 630270479 2.520000e-28 137.0
10 TraesCS7D01G540500 chr7B 88.541 2967 287 28 1012 3962 733308758 733311687 0.000000e+00 3546.0
11 TraesCS7D01G540500 chr7B 82.605 2242 337 31 1011 3227 733174760 733176973 0.000000e+00 1930.0
12 TraesCS7D01G540500 chr7B 85.833 1320 161 23 1909 3219 733082007 733083309 0.000000e+00 1378.0
13 TraesCS7D01G540500 chr7B 91.197 1011 77 9 884 1890 733080952 733081954 0.000000e+00 1363.0
14 TraesCS7D01G540500 chr7B 83.358 1346 189 23 1914 3238 733142535 733143866 0.000000e+00 1212.0
15 TraesCS7D01G540500 chr7B 80.117 1710 268 52 2269 3955 733301769 733303429 0.000000e+00 1208.0
16 TraesCS7D01G540500 chr7B 80.115 1559 240 44 2294 3835 733037947 733039452 0.000000e+00 1098.0
17 TraesCS7D01G540500 chr7B 83.478 805 122 6 1012 1812 733141674 733142471 0.000000e+00 739.0
18 TraesCS7D01G540500 chr7B 82.439 820 126 11 1013 1828 733296821 733297626 0.000000e+00 701.0
19 TraesCS7D01G540500 chr7B 81.602 799 127 10 1036 1828 733028637 733029421 1.220000e-180 643.0
20 TraesCS7D01G540500 chr7B 90.824 425 39 0 4618 5042 222732090 222732514 2.100000e-158 569.0
21 TraesCS7D01G540500 chr7B 96.413 223 8 0 1 223 62394180 62393958 8.210000e-98 368.0
22 TraesCS7D01G540500 chr7B 94.690 226 9 2 1 223 605364238 605364463 1.070000e-91 348.0
23 TraesCS7D01G540500 chr7B 76.805 651 125 20 3270 3910 733083333 733083967 4.980000e-90 342.0
24 TraesCS7D01G540500 chr7B 89.455 275 17 6 391 656 733080296 733080567 2.310000e-88 337.0
25 TraesCS7D01G540500 chr7B 81.643 207 20 12 3994 4185 733311949 733312152 6.960000e-34 156.0
26 TraesCS7D01G540500 chr7B 88.312 77 7 2 4019 4093 733311689 733311765 1.990000e-14 91.6
27 TraesCS7D01G540500 chr1B 85.547 1875 219 28 1909 3773 361369530 361371362 0.000000e+00 1914.0
28 TraesCS7D01G540500 chr1B 84.870 846 105 10 1011 1855 361368702 361369525 0.000000e+00 832.0
29 TraesCS7D01G540500 chr1B 81.271 299 26 16 3852 4145 361371361 361371634 1.130000e-51 215.0
30 TraesCS7D01G540500 chr4A 82.966 1814 255 34 1315 3078 589333443 589335252 0.000000e+00 1589.0
31 TraesCS7D01G540500 chr4A 91.529 425 31 2 4618 5042 116847734 116847315 9.690000e-162 580.0
32 TraesCS7D01G540500 chr4A 81.068 412 68 10 4194 4599 736933764 736934171 2.330000e-83 320.0
33 TraesCS7D01G540500 chr6B 86.432 1334 163 12 1917 3238 662031098 662029771 0.000000e+00 1445.0
34 TraesCS7D01G540500 chr7A 78.310 2047 344 70 1912 3911 726468105 726470098 0.000000e+00 1229.0
35 TraesCS7D01G540500 chr7A 84.910 782 106 7 1909 2684 726475735 726476510 0.000000e+00 780.0
36 TraesCS7D01G540500 chr7A 80.072 838 137 13 1022 1845 726474679 726475500 3.460000e-166 595.0
37 TraesCS7D01G540500 chr7A 80.921 760 131 6 1070 1829 726467256 726468001 5.790000e-164 588.0
38 TraesCS7D01G540500 chr4B 93.317 419 28 0 4618 5036 2014210 2014628 2.050000e-173 619.0
39 TraesCS7D01G540500 chr4B 92.925 424 29 1 4613 5036 2014018 2014440 2.660000e-172 616.0
40 TraesCS7D01G540500 chr4B 91.549 426 35 1 4618 5042 579706564 579706139 2.080000e-163 586.0
41 TraesCS7D01G540500 chr5A 92.706 425 31 0 4617 5041 9566241 9566665 9.550000e-172 614.0
42 TraesCS7D01G540500 chr5A 80.378 423 75 7 4197 4617 353810045 353809629 1.080000e-81 315.0
43 TraesCS7D01G540500 chr5D 90.749 454 41 1 4618 5071 438921422 438921874 5.750000e-169 604.0
44 TraesCS7D01G540500 chr3B 92.235 425 29 1 4618 5042 331935206 331935626 2.670000e-167 599.0
45 TraesCS7D01G540500 chr3B 79.478 804 150 8 1012 1813 20459986 20459196 1.630000e-154 556.0
46 TraesCS7D01G540500 chr3B 100.000 32 0 0 5040 5071 825891245 825891214 5.610000e-05 60.2
47 TraesCS7D01G540500 chr3D 91.803 427 33 2 4618 5042 586365386 586364960 1.240000e-165 593.0
48 TraesCS7D01G540500 chr3D 82.469 405 60 7 4197 4596 456108002 456107604 1.380000e-90 344.0
49 TraesCS7D01G540500 chr1D 75.859 1106 213 46 1933 3013 473406710 473407786 9.960000e-142 514.0
50 TraesCS7D01G540500 chr1D 97.758 223 4 1 1 223 422997464 422997243 2.930000e-102 383.0
51 TraesCS7D01G540500 chr1D 96.380 221 8 0 1 221 423013151 423012931 1.060000e-96 364.0
52 TraesCS7D01G540500 chr1D 87.500 104 11 2 76 179 461427014 461426913 9.130000e-23 119.0
53 TraesCS7D01G540500 chr2B 86.154 390 50 4 4230 4617 275325525 275325138 8.040000e-113 418.0
54 TraesCS7D01G540500 chrUn 97.768 224 3 2 1 223 75322317 75322539 8.150000e-103 385.0
55 TraesCS7D01G540500 chrUn 97.768 224 3 2 1 223 287806151 287806373 8.150000e-103 385.0
56 TraesCS7D01G540500 chrUn 96.861 223 5 2 1 223 94888495 94888275 6.350000e-99 372.0
57 TraesCS7D01G540500 chrUn 81.235 421 70 9 4201 4617 311857021 311857436 1.080000e-86 331.0
58 TraesCS7D01G540500 chr6A 83.938 386 58 3 4230 4613 598602546 598602163 2.950000e-97 366.0
59 TraesCS7D01G540500 chr4D 95.928 221 8 1 1 221 452674024 452674243 1.780000e-94 357.0
60 TraesCS7D01G540500 chr5B 80.420 429 76 7 4191 4617 300416695 300417117 2.330000e-83 320.0
61 TraesCS7D01G540500 chr3A 92.308 39 3 0 5068 5106 31584451 31584489 7.260000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7D01G540500 chr7D 630501889 630507077 5188 False 9583.000000 9583 100.000000 1 5189 1 chr7D.!!$F4 5188
1 TraesCS7D01G540500 chr7D 630253305 630255507 2202 False 1988.000000 1988 83.178000 1011 3227 1 chr7D.!!$F2 2216
2 TraesCS7D01G540500 chr7D 630266999 630277334 10335 False 996.833333 3843 91.803667 231 4617 6 chr7D.!!$F5 4386
3 TraesCS7D01G540500 chr7B 733174760 733176973 2213 False 1930.000000 1930 82.605000 1011 3227 1 chr7B.!!$F5 2216
4 TraesCS7D01G540500 chr7B 733308758 733312152 3394 False 1264.533333 3546 86.165333 1012 4185 3 chr7B.!!$F10 3173
5 TraesCS7D01G540500 chr7B 733301769 733303429 1660 False 1208.000000 1208 80.117000 2269 3955 1 chr7B.!!$F7 1686
6 TraesCS7D01G540500 chr7B 733037947 733039452 1505 False 1098.000000 1098 80.115000 2294 3835 1 chr7B.!!$F4 1541
7 TraesCS7D01G540500 chr7B 733141674 733143866 2192 False 975.500000 1212 83.418000 1012 3238 2 chr7B.!!$F9 2226
8 TraesCS7D01G540500 chr7B 733080296 733083967 3671 False 855.000000 1378 85.822500 391 3910 4 chr7B.!!$F8 3519
9 TraesCS7D01G540500 chr7B 733296821 733297626 805 False 701.000000 701 82.439000 1013 1828 1 chr7B.!!$F6 815
10 TraesCS7D01G540500 chr7B 733028637 733029421 784 False 643.000000 643 81.602000 1036 1828 1 chr7B.!!$F3 792
11 TraesCS7D01G540500 chr1B 361368702 361371634 2932 False 987.000000 1914 83.896000 1011 4145 3 chr1B.!!$F1 3134
12 TraesCS7D01G540500 chr4A 589333443 589335252 1809 False 1589.000000 1589 82.966000 1315 3078 1 chr4A.!!$F1 1763
13 TraesCS7D01G540500 chr6B 662029771 662031098 1327 True 1445.000000 1445 86.432000 1917 3238 1 chr6B.!!$R1 1321
14 TraesCS7D01G540500 chr7A 726467256 726470098 2842 False 908.500000 1229 79.615500 1070 3911 2 chr7A.!!$F1 2841
15 TraesCS7D01G540500 chr7A 726474679 726476510 1831 False 687.500000 780 82.491000 1022 2684 2 chr7A.!!$F2 1662
16 TraesCS7D01G540500 chr4B 2014018 2014628 610 False 617.500000 619 93.121000 4613 5036 2 chr4B.!!$F1 423
17 TraesCS7D01G540500 chr3B 20459196 20459986 790 True 556.000000 556 79.478000 1012 1813 1 chr3B.!!$R1 801
18 TraesCS7D01G540500 chr1D 473406710 473407786 1076 False 514.000000 514 75.859000 1933 3013 1 chr1D.!!$F1 1080

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
916 5962 0.033991 TCCTCACTAGAGCCTCGCTT 60.034 55.0 0.00 0.0 39.88 4.68 F
1485 6581 0.459585 TAGCTGCGTTCCACGGAATC 60.460 55.0 1.02 0.0 42.43 2.52 F
3384 10133 0.392863 TCAGGGATCCATGTTGCACG 60.393 55.0 24.83 0.0 0.00 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1747 6852 1.219393 CTTTCTCCCACCTCTCCGC 59.781 63.158 0.00 0.00 0.00 5.54 R
3430 10182 0.262876 GAGGCCATTCCCTTGGGAAT 59.737 55.000 24.11 24.11 38.92 3.01 R
5126 12417 0.032952 TGTTAGCGTTTCGGTCAGCT 59.967 50.000 0.00 2.46 43.07 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.667575 TGAGATAAAAGAGCTACTGGATTCT 57.332 36.000 0.00 0.00 0.00 2.40
26 27 7.495901 TGAGATAAAAGAGCTACTGGATTCTG 58.504 38.462 0.00 0.00 0.00 3.02
29 30 9.373450 AGATAAAAGAGCTACTGGATTCTGATA 57.627 33.333 0.00 0.00 0.00 2.15
30 31 9.638239 GATAAAAGAGCTACTGGATTCTGATAG 57.362 37.037 0.00 0.00 0.00 2.08
31 32 7.667575 AAAAGAGCTACTGGATTCTGATAGA 57.332 36.000 0.00 0.00 0.00 1.98
32 33 6.899393 AAGAGCTACTGGATTCTGATAGAG 57.101 41.667 0.00 0.00 0.00 2.43
34 35 6.240894 AGAGCTACTGGATTCTGATAGAGAG 58.759 44.000 0.00 0.00 30.18 3.20
35 36 5.324409 AGCTACTGGATTCTGATAGAGAGG 58.676 45.833 0.00 0.00 30.18 3.69
36 37 5.076873 GCTACTGGATTCTGATAGAGAGGT 58.923 45.833 0.00 0.00 30.18 3.85
38 39 5.867903 ACTGGATTCTGATAGAGAGGTTG 57.132 43.478 0.00 0.00 30.18 3.77
39 40 5.276440 ACTGGATTCTGATAGAGAGGTTGT 58.724 41.667 0.00 0.00 30.18 3.32
40 41 6.436027 ACTGGATTCTGATAGAGAGGTTGTA 58.564 40.000 0.00 0.00 30.18 2.41
42 43 6.436027 TGGATTCTGATAGAGAGGTTGTAGT 58.564 40.000 0.00 0.00 30.18 2.73
43 44 6.897966 TGGATTCTGATAGAGAGGTTGTAGTT 59.102 38.462 0.00 0.00 30.18 2.24
44 45 8.059461 TGGATTCTGATAGAGAGGTTGTAGTTA 58.941 37.037 0.00 0.00 30.18 2.24
45 46 8.573035 GGATTCTGATAGAGAGGTTGTAGTTAG 58.427 40.741 0.00 0.00 30.18 2.34
46 47 9.344772 GATTCTGATAGAGAGGTTGTAGTTAGA 57.655 37.037 0.00 0.00 30.18 2.10
47 48 8.740123 TTCTGATAGAGAGGTTGTAGTTAGAG 57.260 38.462 0.00 0.00 30.18 2.43
48 49 6.768861 TCTGATAGAGAGGTTGTAGTTAGAGC 59.231 42.308 0.00 0.00 0.00 4.09
51 52 2.754002 GAGAGGTTGTAGTTAGAGCGGT 59.246 50.000 0.00 0.00 0.00 5.68
52 53 3.163467 AGAGGTTGTAGTTAGAGCGGTT 58.837 45.455 0.00 0.00 0.00 4.44
54 55 4.398673 AGAGGTTGTAGTTAGAGCGGTTAG 59.601 45.833 0.00 0.00 0.00 2.34
55 56 3.446516 AGGTTGTAGTTAGAGCGGTTAGG 59.553 47.826 0.00 0.00 0.00 2.69
56 57 3.185330 GTTGTAGTTAGAGCGGTTAGGC 58.815 50.000 0.00 0.00 0.00 3.93
57 58 1.402968 TGTAGTTAGAGCGGTTAGGCG 59.597 52.381 0.00 0.00 38.18 5.52
58 59 0.383231 TAGTTAGAGCGGTTAGGCGC 59.617 55.000 0.00 0.00 38.18 6.53
59 60 1.141234 GTTAGAGCGGTTAGGCGCT 59.859 57.895 7.64 0.00 45.24 5.92
63 64 2.125512 AGCGGTTAGGCGCTCAAG 60.126 61.111 7.64 0.00 36.71 3.02
64 65 2.125673 GCGGTTAGGCGCTCAAGA 60.126 61.111 7.64 0.00 0.00 3.02
66 67 1.296056 GCGGTTAGGCGCTCAAGAAA 61.296 55.000 7.64 0.00 0.00 2.52
67 68 1.369625 CGGTTAGGCGCTCAAGAAAT 58.630 50.000 7.64 0.00 0.00 2.17
68 69 2.546778 CGGTTAGGCGCTCAAGAAATA 58.453 47.619 7.64 0.00 0.00 1.40
69 70 2.540101 CGGTTAGGCGCTCAAGAAATAG 59.460 50.000 7.64 0.00 0.00 1.73
70 71 2.872858 GGTTAGGCGCTCAAGAAATAGG 59.127 50.000 7.64 0.00 0.00 2.57
71 72 2.872858 GTTAGGCGCTCAAGAAATAGGG 59.127 50.000 7.64 0.00 0.00 3.53
72 73 0.912486 AGGCGCTCAAGAAATAGGGT 59.088 50.000 7.64 0.00 0.00 4.34
73 74 1.282157 AGGCGCTCAAGAAATAGGGTT 59.718 47.619 7.64 0.00 0.00 4.11
74 75 2.504175 AGGCGCTCAAGAAATAGGGTTA 59.496 45.455 7.64 0.00 0.00 2.85
77 78 3.556365 GCGCTCAAGAAATAGGGTTAGTC 59.444 47.826 0.00 0.00 0.00 2.59
78 79 4.755411 CGCTCAAGAAATAGGGTTAGTCA 58.245 43.478 0.00 0.00 0.00 3.41
79 80 5.360591 CGCTCAAGAAATAGGGTTAGTCAT 58.639 41.667 0.00 0.00 0.00 3.06
80 81 5.235186 CGCTCAAGAAATAGGGTTAGTCATG 59.765 44.000 0.00 0.00 0.00 3.07
81 82 6.349300 GCTCAAGAAATAGGGTTAGTCATGA 58.651 40.000 0.00 0.00 0.00 3.07
82 83 6.481644 GCTCAAGAAATAGGGTTAGTCATGAG 59.518 42.308 0.00 0.00 34.15 2.90
83 84 6.349300 TCAAGAAATAGGGTTAGTCATGAGC 58.651 40.000 0.00 0.00 0.00 4.26
86 87 6.352516 AGAAATAGGGTTAGTCATGAGCTTG 58.647 40.000 0.00 0.00 0.00 4.01
88 89 1.912043 AGGGTTAGTCATGAGCTTGCT 59.088 47.619 0.00 0.00 0.00 3.91
89 90 3.107601 AGGGTTAGTCATGAGCTTGCTA 58.892 45.455 0.00 0.00 0.00 3.49
90 91 3.133721 AGGGTTAGTCATGAGCTTGCTAG 59.866 47.826 0.00 0.00 0.00 3.42
91 92 3.462021 GGTTAGTCATGAGCTTGCTAGG 58.538 50.000 0.00 0.00 0.00 3.02
92 93 3.133003 GGTTAGTCATGAGCTTGCTAGGA 59.867 47.826 0.00 0.00 0.00 2.94
94 95 5.363939 GTTAGTCATGAGCTTGCTAGGATT 58.636 41.667 0.00 0.00 0.00 3.01
95 96 3.806380 AGTCATGAGCTTGCTAGGATTG 58.194 45.455 0.00 0.00 0.00 2.67
96 97 2.877168 GTCATGAGCTTGCTAGGATTGG 59.123 50.000 0.00 0.00 0.00 3.16
97 98 2.158711 TCATGAGCTTGCTAGGATTGGG 60.159 50.000 0.00 0.00 0.00 4.12
98 99 1.583556 TGAGCTTGCTAGGATTGGGA 58.416 50.000 0.00 0.00 0.00 4.37
99 100 1.487976 TGAGCTTGCTAGGATTGGGAG 59.512 52.381 0.00 0.00 0.00 4.30
100 101 1.765314 GAGCTTGCTAGGATTGGGAGA 59.235 52.381 0.00 0.00 0.00 3.71
101 102 1.767681 AGCTTGCTAGGATTGGGAGAG 59.232 52.381 0.00 0.00 0.00 3.20
104 105 3.539604 CTTGCTAGGATTGGGAGAGTTG 58.460 50.000 0.00 0.00 0.00 3.16
106 107 3.387962 TGCTAGGATTGGGAGAGTTGAT 58.612 45.455 0.00 0.00 0.00 2.57
107 108 3.135348 TGCTAGGATTGGGAGAGTTGATG 59.865 47.826 0.00 0.00 0.00 3.07
109 110 4.384647 GCTAGGATTGGGAGAGTTGATGTT 60.385 45.833 0.00 0.00 0.00 2.71
110 111 5.163301 GCTAGGATTGGGAGAGTTGATGTTA 60.163 44.000 0.00 0.00 0.00 2.41
111 112 5.779241 AGGATTGGGAGAGTTGATGTTAA 57.221 39.130 0.00 0.00 0.00 2.01
112 113 6.139679 AGGATTGGGAGAGTTGATGTTAAA 57.860 37.500 0.00 0.00 0.00 1.52
113 114 6.552008 AGGATTGGGAGAGTTGATGTTAAAA 58.448 36.000 0.00 0.00 0.00 1.52
114 115 6.434340 AGGATTGGGAGAGTTGATGTTAAAAC 59.566 38.462 0.00 0.00 0.00 2.43
115 116 6.350194 GGATTGGGAGAGTTGATGTTAAAACC 60.350 42.308 0.00 0.00 0.00 3.27
118 119 3.500680 GGAGAGTTGATGTTAAAACCGCA 59.499 43.478 0.00 0.00 0.00 5.69
119 120 4.378459 GGAGAGTTGATGTTAAAACCGCAG 60.378 45.833 0.00 0.00 0.00 5.18
121 122 4.213482 AGAGTTGATGTTAAAACCGCAGTC 59.787 41.667 0.00 0.00 0.00 3.51
122 123 4.134563 AGTTGATGTTAAAACCGCAGTCT 58.865 39.130 0.00 0.00 0.00 3.24
123 124 4.024048 AGTTGATGTTAAAACCGCAGTCTG 60.024 41.667 0.00 0.00 0.00 3.51
124 125 2.811431 TGATGTTAAAACCGCAGTCTGG 59.189 45.455 1.14 0.00 0.00 3.86
125 126 2.335316 TGTTAAAACCGCAGTCTGGT 57.665 45.000 1.14 0.00 42.98 4.00
130 131 2.743718 ACCGCAGTCTGGTTGAGG 59.256 61.111 1.14 0.00 40.79 3.86
131 132 2.140792 ACCGCAGTCTGGTTGAGGT 61.141 57.895 1.14 0.00 42.79 3.85
134 135 1.374758 GCAGTCTGGTTGAGGTCCG 60.375 63.158 1.14 0.00 0.00 4.79
135 136 1.293498 CAGTCTGGTTGAGGTCCGG 59.707 63.158 0.00 0.00 0.00 5.14
136 137 2.047179 GTCTGGTTGAGGTCCGGC 60.047 66.667 0.00 0.00 0.00 6.13
137 138 3.319198 TCTGGTTGAGGTCCGGCC 61.319 66.667 0.00 0.59 37.58 6.13
138 139 4.410400 CTGGTTGAGGTCCGGCCC 62.410 72.222 10.82 1.57 38.26 5.80
141 142 2.114411 GTTGAGGTCCGGCCCAAA 59.886 61.111 3.37 0.00 38.26 3.28
142 143 1.304134 GTTGAGGTCCGGCCCAAAT 60.304 57.895 3.37 0.00 38.26 2.32
143 144 0.034863 GTTGAGGTCCGGCCCAAATA 60.035 55.000 3.37 0.00 38.26 1.40
145 146 1.148498 GAGGTCCGGCCCAAATAGG 59.852 63.158 3.37 0.00 38.26 2.57
161 162 7.553881 CCAAATAGGGTTGTAGAACTATGTG 57.446 40.000 2.43 0.00 33.11 3.21
162 163 7.335627 CCAAATAGGGTTGTAGAACTATGTGA 58.664 38.462 2.43 0.00 34.52 3.58
165 166 8.554490 AATAGGGTTGTAGAACTATGTGAGAT 57.446 34.615 2.43 0.00 32.15 2.75
166 167 6.227298 AGGGTTGTAGAACTATGTGAGATG 57.773 41.667 2.43 0.00 32.15 2.90
167 168 5.129485 AGGGTTGTAGAACTATGTGAGATGG 59.871 44.000 2.43 0.00 32.15 3.51
168 169 5.128827 GGGTTGTAGAACTATGTGAGATGGA 59.871 44.000 2.43 0.00 32.15 3.41
169 170 6.183361 GGGTTGTAGAACTATGTGAGATGGAT 60.183 42.308 2.43 0.00 32.15 3.41
170 171 6.926272 GGTTGTAGAACTATGTGAGATGGATC 59.074 42.308 2.43 0.00 32.15 3.36
172 173 7.846101 TGTAGAACTATGTGAGATGGATCAT 57.154 36.000 0.00 0.00 0.00 2.45
173 174 8.255111 TGTAGAACTATGTGAGATGGATCATT 57.745 34.615 0.00 0.00 0.00 2.57
174 175 8.363390 TGTAGAACTATGTGAGATGGATCATTC 58.637 37.037 0.00 0.00 0.00 2.67
175 176 7.615039 AGAACTATGTGAGATGGATCATTCT 57.385 36.000 0.00 0.00 0.00 2.40
177 178 6.990908 ACTATGTGAGATGGATCATTCTGA 57.009 37.500 1.69 0.00 0.00 3.27
178 179 7.556416 ACTATGTGAGATGGATCATTCTGAT 57.444 36.000 1.69 0.00 40.34 2.90
192 193 8.632906 GATCATTCTGATCCAGGTTGATTAAT 57.367 34.615 5.94 0.00 45.66 1.40
193 194 7.812690 TCATTCTGATCCAGGTTGATTAATG 57.187 36.000 0.00 0.00 31.51 1.90
194 195 7.576403 TCATTCTGATCCAGGTTGATTAATGA 58.424 34.615 0.00 0.00 32.39 2.57
196 197 8.689061 CATTCTGATCCAGGTTGATTAATGAAA 58.311 33.333 0.00 0.00 29.88 2.69
197 198 8.648698 TTCTGATCCAGGTTGATTAATGAAAA 57.351 30.769 0.00 0.00 31.51 2.29
199 200 8.522830 TCTGATCCAGGTTGATTAATGAAAAAC 58.477 33.333 0.00 0.00 31.51 2.43
200 201 7.610865 TGATCCAGGTTGATTAATGAAAAACC 58.389 34.615 0.00 2.06 40.51 3.27
201 202 6.353404 TCCAGGTTGATTAATGAAAAACCC 57.647 37.500 12.18 1.31 41.00 4.11
202 203 5.247337 TCCAGGTTGATTAATGAAAAACCCC 59.753 40.000 12.18 1.02 41.00 4.95
203 204 5.248248 CCAGGTTGATTAATGAAAAACCCCT 59.752 40.000 12.18 2.90 41.00 4.79
205 206 7.223584 CAGGTTGATTAATGAAAAACCCCTTT 58.776 34.615 12.18 0.00 41.00 3.11
207 208 6.653320 GGTTGATTAATGAAAAACCCCTTTCC 59.347 38.462 0.00 0.00 35.31 3.13
208 209 6.367374 TGATTAATGAAAAACCCCTTTCCC 57.633 37.500 0.00 0.00 34.91 3.97
209 210 5.249622 TGATTAATGAAAAACCCCTTTCCCC 59.750 40.000 0.00 0.00 34.91 4.81
210 211 2.038863 ATGAAAAACCCCTTTCCCCC 57.961 50.000 0.00 0.00 34.91 5.40
272 3418 3.064820 TGTCGAGTCTTTTGCCTTGTTTC 59.935 43.478 0.00 0.00 0.00 2.78
333 3483 6.312918 TCTCTTGATTACATAGTTTTGACGCC 59.687 38.462 0.00 0.00 0.00 5.68
335 3485 5.539582 TGATTACATAGTTTTGACGCCAC 57.460 39.130 0.00 0.00 0.00 5.01
336 3486 4.393680 TGATTACATAGTTTTGACGCCACC 59.606 41.667 0.00 0.00 0.00 4.61
337 3487 1.153353 ACATAGTTTTGACGCCACCG 58.847 50.000 0.00 0.00 41.14 4.94
346 3496 3.231736 ACGCCACCGTCTTGGAGT 61.232 61.111 0.00 0.00 46.39 3.85
347 3497 2.432628 CGCCACCGTCTTGGAGTC 60.433 66.667 0.00 0.00 42.00 3.36
348 3498 2.741092 GCCACCGTCTTGGAGTCA 59.259 61.111 0.00 0.00 42.00 3.41
349 3499 1.374758 GCCACCGTCTTGGAGTCAG 60.375 63.158 0.00 0.00 42.00 3.51
350 3500 2.050269 CCACCGTCTTGGAGTCAGT 58.950 57.895 0.00 0.00 42.00 3.41
351 3501 0.393077 CCACCGTCTTGGAGTCAGTT 59.607 55.000 0.00 0.00 42.00 3.16
352 3502 1.202651 CCACCGTCTTGGAGTCAGTTT 60.203 52.381 0.00 0.00 42.00 2.66
353 3503 2.135933 CACCGTCTTGGAGTCAGTTTC 58.864 52.381 0.00 0.00 42.00 2.78
354 3504 1.070289 ACCGTCTTGGAGTCAGTTTCC 59.930 52.381 0.00 0.00 42.00 3.13
355 3505 1.608283 CCGTCTTGGAGTCAGTTTCCC 60.608 57.143 0.00 0.00 42.00 3.97
356 3506 1.797025 GTCTTGGAGTCAGTTTCCCG 58.203 55.000 0.00 0.00 33.62 5.14
357 3507 0.034896 TCTTGGAGTCAGTTTCCCGC 59.965 55.000 0.00 0.00 33.62 6.13
358 3508 0.250295 CTTGGAGTCAGTTTCCCGCA 60.250 55.000 0.00 0.00 33.62 5.69
359 3509 0.400213 TTGGAGTCAGTTTCCCGCAT 59.600 50.000 0.00 0.00 33.62 4.73
360 3510 0.321564 TGGAGTCAGTTTCCCGCATG 60.322 55.000 0.00 0.00 33.62 4.06
361 3511 0.036388 GGAGTCAGTTTCCCGCATGA 60.036 55.000 0.00 0.00 0.00 3.07
362 3512 1.363744 GAGTCAGTTTCCCGCATGAG 58.636 55.000 0.00 0.00 0.00 2.90
363 3513 0.674895 AGTCAGTTTCCCGCATGAGC 60.675 55.000 0.00 0.00 37.42 4.26
364 3514 0.674895 GTCAGTTTCCCGCATGAGCT 60.675 55.000 0.00 0.00 39.10 4.09
365 3515 0.036732 TCAGTTTCCCGCATGAGCTT 59.963 50.000 0.00 0.00 39.10 3.74
366 3516 0.449388 CAGTTTCCCGCATGAGCTTC 59.551 55.000 0.00 0.00 39.10 3.86
367 3517 0.326264 AGTTTCCCGCATGAGCTTCT 59.674 50.000 0.00 0.00 39.10 2.85
368 3518 0.449388 GTTTCCCGCATGAGCTTCTG 59.551 55.000 0.00 0.00 39.10 3.02
369 3519 0.677731 TTTCCCGCATGAGCTTCTGG 60.678 55.000 0.00 0.00 39.10 3.86
370 3520 1.552799 TTCCCGCATGAGCTTCTGGA 61.553 55.000 0.00 0.00 39.10 3.86
371 3521 1.147824 CCCGCATGAGCTTCTGGAT 59.852 57.895 0.00 0.00 39.10 3.41
372 3522 0.394192 CCCGCATGAGCTTCTGGATA 59.606 55.000 0.00 0.00 39.10 2.59
373 3523 1.506493 CCGCATGAGCTTCTGGATAC 58.494 55.000 0.00 0.00 39.10 2.24
374 3524 1.506493 CGCATGAGCTTCTGGATACC 58.494 55.000 0.00 0.00 39.10 2.73
375 3525 1.875576 CGCATGAGCTTCTGGATACCC 60.876 57.143 0.00 0.00 39.10 3.69
376 3526 1.141657 GCATGAGCTTCTGGATACCCA 59.858 52.381 0.00 0.00 37.75 4.51
377 3527 2.843701 CATGAGCTTCTGGATACCCAC 58.156 52.381 0.00 0.00 37.58 4.61
378 3528 1.204146 TGAGCTTCTGGATACCCACC 58.796 55.000 0.00 0.00 37.58 4.61
379 3529 1.204146 GAGCTTCTGGATACCCACCA 58.796 55.000 0.00 0.00 37.58 4.17
380 3530 1.771255 GAGCTTCTGGATACCCACCAT 59.229 52.381 0.00 0.00 37.58 3.55
381 3531 1.771255 AGCTTCTGGATACCCACCATC 59.229 52.381 0.00 0.00 37.58 3.51
382 3532 1.771255 GCTTCTGGATACCCACCATCT 59.229 52.381 0.00 0.00 37.58 2.90
383 3533 2.224402 GCTTCTGGATACCCACCATCTC 60.224 54.545 0.00 0.00 37.58 2.75
388 3538 2.093181 TGGATACCCACCATCTCGTTTG 60.093 50.000 0.00 0.00 37.58 2.93
404 3554 1.098869 TTTGCTGGCGACAAGTTTCA 58.901 45.000 0.00 0.00 42.06 2.69
416 3566 1.169661 AAGTTTCATCGGCGCCACAA 61.170 50.000 28.98 11.85 0.00 3.33
447 3597 2.517166 GCGAGGCATTCCTTCCCC 60.517 66.667 0.00 0.00 44.46 4.81
504 3689 1.001746 CTAGGATGCATGATGAGCGGT 59.998 52.381 2.46 0.00 33.85 5.68
505 3690 0.250209 AGGATGCATGATGAGCGGTC 60.250 55.000 2.46 7.89 33.85 4.79
506 3691 1.563435 GGATGCATGATGAGCGGTCG 61.563 60.000 2.46 0.00 33.85 4.79
507 3692 0.877649 GATGCATGATGAGCGGTCGT 60.878 55.000 9.50 9.50 33.85 4.34
508 3693 0.462581 ATGCATGATGAGCGGTCGTT 60.463 50.000 11.20 0.00 33.85 3.85
509 3694 0.673333 TGCATGATGAGCGGTCGTTT 60.673 50.000 11.20 0.00 33.85 3.60
510 3695 0.447801 GCATGATGAGCGGTCGTTTT 59.552 50.000 11.20 0.00 0.00 2.43
511 3696 1.529826 GCATGATGAGCGGTCGTTTTC 60.530 52.381 11.20 5.38 0.00 2.29
512 3697 2.002586 CATGATGAGCGGTCGTTTTCT 58.997 47.619 11.20 0.00 0.00 2.52
513 3698 2.163818 TGATGAGCGGTCGTTTTCTT 57.836 45.000 11.20 0.00 0.00 2.52
514 3699 2.066262 TGATGAGCGGTCGTTTTCTTC 58.934 47.619 11.20 0.00 0.00 2.87
515 3700 2.288825 TGATGAGCGGTCGTTTTCTTCT 60.289 45.455 11.20 0.00 0.00 2.85
516 3701 1.497991 TGAGCGGTCGTTTTCTTCTG 58.502 50.000 10.46 0.00 0.00 3.02
517 3702 0.790814 GAGCGGTCGTTTTCTTCTGG 59.209 55.000 0.00 0.00 0.00 3.86
518 3703 0.106149 AGCGGTCGTTTTCTTCTGGT 59.894 50.000 0.00 0.00 0.00 4.00
519 3704 0.942252 GCGGTCGTTTTCTTCTGGTT 59.058 50.000 0.00 0.00 0.00 3.67
520 3705 1.332686 GCGGTCGTTTTCTTCTGGTTT 59.667 47.619 0.00 0.00 0.00 3.27
521 3706 2.601504 GCGGTCGTTTTCTTCTGGTTTC 60.602 50.000 0.00 0.00 0.00 2.78
522 3707 2.032290 CGGTCGTTTTCTTCTGGTTTCC 60.032 50.000 0.00 0.00 0.00 3.13
523 3708 3.211865 GGTCGTTTTCTTCTGGTTTCCT 58.788 45.455 0.00 0.00 0.00 3.36
524 3709 4.383173 GGTCGTTTTCTTCTGGTTTCCTA 58.617 43.478 0.00 0.00 0.00 2.94
525 3710 4.451435 GGTCGTTTTCTTCTGGTTTCCTAG 59.549 45.833 0.00 0.00 0.00 3.02
526 3711 5.295152 GTCGTTTTCTTCTGGTTTCCTAGA 58.705 41.667 0.00 0.00 0.00 2.43
527 3712 5.405873 GTCGTTTTCTTCTGGTTTCCTAGAG 59.594 44.000 0.00 0.00 0.00 2.43
528 3713 4.152580 CGTTTTCTTCTGGTTTCCTAGAGC 59.847 45.833 0.00 0.00 0.00 4.09
529 3714 5.309638 GTTTTCTTCTGGTTTCCTAGAGCT 58.690 41.667 0.00 0.00 0.00 4.09
530 3715 6.465084 GTTTTCTTCTGGTTTCCTAGAGCTA 58.535 40.000 0.00 0.00 0.00 3.32
541 3726 4.100279 TCCTAGAGCTATCGATCCAACA 57.900 45.455 0.00 0.00 0.00 3.33
569 3754 5.986741 GCATTAATTCATTCACATGGCATCA 59.013 36.000 0.00 0.00 0.00 3.07
617 3808 4.346730 TCTGGAATTCATGGCTCAATTGT 58.653 39.130 7.93 0.00 0.00 2.71
622 3813 3.485947 TTCATGGCTCAATTGTAACGC 57.514 42.857 5.13 4.53 0.00 4.84
658 3849 1.078848 CTCTCCTTCCTTGCACGGG 60.079 63.158 9.71 3.87 0.00 5.28
671 5642 1.816863 GCACGGGACTGAGACTTGGA 61.817 60.000 0.00 0.00 0.00 3.53
672 5643 0.038159 CACGGGACTGAGACTTGGAC 60.038 60.000 0.00 0.00 0.00 4.02
673 5644 1.186267 ACGGGACTGAGACTTGGACC 61.186 60.000 0.00 0.00 0.00 4.46
674 5645 1.592223 GGGACTGAGACTTGGACCG 59.408 63.158 0.00 0.00 0.00 4.79
683 5668 3.447586 TGAGACTTGGACCGAGATTTAGG 59.552 47.826 16.24 0.00 0.00 2.69
687 5672 3.055312 ACTTGGACCGAGATTTAGGAACC 60.055 47.826 16.24 0.00 0.00 3.62
690 5675 0.828677 ACCGAGATTTAGGAACCCCG 59.171 55.000 0.00 0.00 37.58 5.73
691 5676 0.828677 CCGAGATTTAGGAACCCCGT 59.171 55.000 0.00 0.00 37.58 5.28
692 5677 1.208776 CCGAGATTTAGGAACCCCGTT 59.791 52.381 0.00 0.00 37.58 4.44
693 5678 2.277084 CGAGATTTAGGAACCCCGTTG 58.723 52.381 0.00 0.00 37.58 4.10
694 5679 2.640184 GAGATTTAGGAACCCCGTTGG 58.360 52.381 0.00 0.00 41.37 3.77
695 5680 1.100510 GATTTAGGAACCCCGTTGGC 58.899 55.000 0.00 0.00 37.83 4.52
696 5681 0.323999 ATTTAGGAACCCCGTTGGCC 60.324 55.000 0.00 0.00 37.83 5.36
697 5682 2.429235 TTTAGGAACCCCGTTGGCCC 62.429 60.000 0.00 0.00 37.83 5.80
745 5730 2.591715 CGATGGTTCATCCCGCCC 60.592 66.667 2.74 0.00 37.57 6.13
751 5736 3.089874 TTCATCCCGCCCTCCCAG 61.090 66.667 0.00 0.00 0.00 4.45
775 5760 5.717078 TGGTACACTAACTAACTGGTCAG 57.283 43.478 0.00 0.00 0.00 3.51
844 5829 1.377725 CAGCCAGGCTTCCACGAAT 60.378 57.895 12.86 0.00 36.40 3.34
871 5889 3.129287 CCATTCCCATCGTGAAGAAAAGG 59.871 47.826 0.00 0.00 0.00 3.11
907 5953 0.251209 ACACCACGCTCCTCACTAGA 60.251 55.000 0.00 0.00 0.00 2.43
916 5962 0.033991 TCCTCACTAGAGCCTCGCTT 60.034 55.000 0.00 0.00 39.88 4.68
949 5995 5.476945 ACCATTACTCCTCCATCAAACAAAC 59.523 40.000 0.00 0.00 0.00 2.93
961 6007 1.066573 CAAACAAACACCACCAGGCAA 60.067 47.619 0.00 0.00 39.06 4.52
964 6010 0.534412 CAAACACCACCAGGCAACAA 59.466 50.000 0.00 0.00 39.06 2.83
1164 6210 2.179427 CAGATCCTGGTGGACACACTA 58.821 52.381 4.69 0.00 46.51 2.74
1227 6280 3.695606 ACCATGCGCGACCTCAGT 61.696 61.111 12.10 0.00 0.00 3.41
1483 6579 0.947180 GTTAGCTGCGTTCCACGGAA 60.947 55.000 0.00 0.00 42.43 4.30
1485 6581 0.459585 TAGCTGCGTTCCACGGAATC 60.460 55.000 1.02 0.00 42.43 2.52
1486 6582 2.032634 GCTGCGTTCCACGGAATCA 61.033 57.895 1.02 3.11 42.43 2.57
1593 6692 0.474854 TTGTTGGAGGTGGAGGGCTA 60.475 55.000 0.00 0.00 0.00 3.93
1608 6707 1.875488 GGCTAGGAAAGACCACCCTA 58.125 55.000 0.00 0.00 42.04 3.53
1747 6852 2.098117 GCTGCATTTAGTAAGTGCCAGG 59.902 50.000 23.02 15.43 38.06 4.45
1774 6879 3.336138 GGTGGGAGAAAGACCAACTAG 57.664 52.381 0.00 0.00 41.30 2.57
1883 7168 1.677820 CCCGGACACAACCAGTTATCC 60.678 57.143 0.73 0.00 0.00 2.59
2013 7337 6.594788 TTTATCAAAGCAGCTTTTCCTGAT 57.405 33.333 18.22 18.92 34.77 2.90
2086 7413 5.182001 GCCAAGTCATGTTGTTCTAACTCAT 59.818 40.000 0.00 0.00 0.00 2.90
2123 7450 6.211587 TCAAATGCTACCTTTGAATGATGG 57.788 37.500 0.00 0.00 39.11 3.51
2174 7502 6.548993 AGAATTTTTGACTCAGAAAGCTCCTT 59.451 34.615 1.66 0.00 0.00 3.36
2775 9494 4.340381 GCAATCCAAGCCATCATAAGAAGT 59.660 41.667 0.00 0.00 0.00 3.01
2796 9515 7.387948 AGAAGTAAGTTACATGTTCGCTCATTT 59.612 33.333 15.28 0.00 0.00 2.32
2945 9670 5.121811 CCAACTGAGGTATTTGAGGATGAG 58.878 45.833 0.00 0.00 0.00 2.90
3099 9842 6.852858 TTGATTGACAACGATGACTTTGTA 57.147 33.333 0.00 0.00 38.32 2.41
3174 9920 9.832445 GATATCTATAAAGTTGACAACCCTGAA 57.168 33.333 14.72 0.00 0.00 3.02
3283 10029 6.483307 TGGGAATGTTAAATGCTATCGAGAAG 59.517 38.462 0.00 0.00 0.00 2.85
3384 10133 0.392863 TCAGGGATCCATGTTGCACG 60.393 55.000 24.83 0.00 0.00 5.34
3411 10160 4.697352 CCACACCTCCAAGATCTTAAACTG 59.303 45.833 7.86 3.08 0.00 3.16
3430 10182 1.075212 TGGTGCATGACATGGAAAGGA 59.925 47.619 17.03 0.00 30.45 3.36
3459 10211 1.217942 GGAATGGCCTCCCTAACCAAT 59.782 52.381 3.32 0.00 36.94 3.16
3498 10250 6.656270 AGATAGCAGTCACACAATTTGATGAA 59.344 34.615 2.79 0.00 0.00 2.57
3561 10313 1.553704 CTCCAGCTAACGGTAGGGTTT 59.446 52.381 10.05 0.00 0.00 3.27
3568 10320 2.042404 AACGGTAGGGTTTCGTGGCA 62.042 55.000 0.00 0.00 37.20 4.92
3569 10321 2.030958 CGGTAGGGTTTCGTGGCAC 61.031 63.158 7.79 7.79 0.00 5.01
3781 10545 3.719268 TCCAGCATCTTTCAAGCCTTA 57.281 42.857 0.00 0.00 0.00 2.69
3840 10604 0.629571 TAGAGGAGGTGGAGGCCCTA 60.630 60.000 0.00 0.00 30.60 3.53
3976 10829 3.431725 GGCCCGCTGGTTTCTTCG 61.432 66.667 0.00 0.00 0.00 3.79
4025 11099 3.256136 GCGCTAGAGGTATACATCTTGGT 59.744 47.826 23.77 3.97 38.11 3.67
4073 11152 5.518847 CACTACATCGTGTGATTTACGGATT 59.481 40.000 0.00 0.00 41.58 3.01
4108 11187 2.166459 CCTCCACGACAGCAAGAAGATA 59.834 50.000 0.00 0.00 0.00 1.98
4109 11188 3.181471 CCTCCACGACAGCAAGAAGATAT 60.181 47.826 0.00 0.00 0.00 1.63
4110 11189 4.046938 TCCACGACAGCAAGAAGATATC 57.953 45.455 0.00 0.00 0.00 1.63
4111 11190 3.447229 TCCACGACAGCAAGAAGATATCA 59.553 43.478 5.32 0.00 0.00 2.15
4113 11192 4.447054 CCACGACAGCAAGAAGATATCATC 59.553 45.833 5.32 2.27 0.00 2.92
4114 11193 4.447054 CACGACAGCAAGAAGATATCATCC 59.553 45.833 5.32 0.00 0.00 3.51
4117 11220 5.477510 GACAGCAAGAAGATATCATCCGAT 58.522 41.667 5.32 0.00 35.50 4.18
4192 11295 8.897692 TGATAGTGGACACCTTATACTAGGATA 58.102 37.037 0.00 0.00 38.73 2.59
4257 11360 2.035961 GCTTATCGATGGGTGACTGCTA 59.964 50.000 8.54 0.00 0.00 3.49
4264 11367 4.588951 TCGATGGGTGACTGCTAAGATTAT 59.411 41.667 0.00 0.00 0.00 1.28
4346 11449 9.746457 ATCAGGAATCTAGAAATTAATTAGGCC 57.254 33.333 0.01 0.00 0.00 5.19
4410 11513 2.597510 GCCTCCCCCACAACACAC 60.598 66.667 0.00 0.00 0.00 3.82
4563 11666 6.423604 CACTGGTGATTGTTTCCATTTTTACC 59.576 38.462 0.00 0.00 0.00 2.85
4600 11703 2.372837 ACCTGGGAATTGCAGCAAAAAT 59.627 40.909 12.97 1.16 0.00 1.82
4617 11720 7.163441 AGCAAAAATTGGCTGATTAATTGTCT 58.837 30.769 0.00 0.00 39.30 3.41
4650 11753 1.133790 GCTCTAGCCAATGCAACCAAG 59.866 52.381 0.00 0.00 41.13 3.61
4652 11755 2.681848 CTCTAGCCAATGCAACCAAGAG 59.318 50.000 0.00 0.00 41.13 2.85
4661 11764 1.338105 TGCAACCAAGAGACCGATCTG 60.338 52.381 0.00 0.00 34.34 2.90
4670 11773 3.843422 AGAGACCGATCTGATGGAAGAT 58.157 45.455 11.46 0.00 39.66 2.40
4700 11803 4.625311 CAGCACATTATACGTCAACACTCA 59.375 41.667 0.00 0.00 0.00 3.41
4707 11810 1.048601 ACGTCAACACTCACCCTCAT 58.951 50.000 0.00 0.00 0.00 2.90
4731 11834 1.562672 GGCTCCCTCAGGCCTAAACA 61.563 60.000 3.98 0.00 44.48 2.83
4734 11837 0.918983 TCCCTCAGGCCTAAACATGG 59.081 55.000 3.98 0.19 0.00 3.66
4738 11841 1.281867 CTCAGGCCTAAACATGGACCA 59.718 52.381 3.98 0.00 31.51 4.02
4761 11864 4.326504 AAGTGGGCTGCAATATAATTGC 57.673 40.909 15.88 15.88 45.11 3.56
4843 11946 2.041701 AGCCAATGCAACCAAAAGACT 58.958 42.857 0.00 0.00 41.13 3.24
4846 12137 3.383761 CCAATGCAACCAAAAGACTGAC 58.616 45.455 0.00 0.00 0.00 3.51
4849 12140 2.023673 TGCAACCAAAAGACTGACCTG 58.976 47.619 0.00 0.00 0.00 4.00
4863 12154 4.877773 ACTGACCTGATGGAAGAGACTAT 58.122 43.478 0.00 0.00 37.04 2.12
4867 12158 3.972638 ACCTGATGGAAGAGACTATGCAT 59.027 43.478 3.79 3.79 37.04 3.96
4908 12199 2.743718 CTCACGTGTGGCTCCCTT 59.256 61.111 16.51 0.00 0.00 3.95
4922 12213 1.146263 CCCTTAGGCCTAAGCGTGG 59.854 63.158 37.39 30.23 40.79 4.94
4942 12233 0.037590 ACCGAAAGTGGGCTGCAATA 59.962 50.000 0.50 0.00 0.00 1.90
4949 12240 4.326504 AAGTGGGCTGCAATATAATTGC 57.673 40.909 15.88 15.88 45.11 3.56
4956 12247 1.701704 GCAATATAATTGCGCCAGCC 58.298 50.000 4.18 0.00 44.33 4.85
4957 12248 1.000385 GCAATATAATTGCGCCAGCCA 60.000 47.619 4.18 0.00 44.33 4.75
5022 12313 1.535437 GCATGCTCTAGCCAATGCAAC 60.535 52.381 11.37 2.38 44.74 4.17
5023 12314 1.019673 ATGCTCTAGCCAATGCAACG 58.980 50.000 0.00 0.00 41.13 4.10
5026 12317 1.063174 GCTCTAGCCAATGCAACGAAG 59.937 52.381 0.00 0.00 41.13 3.79
5031 12322 1.160137 GCCAATGCAACGAAGAGACT 58.840 50.000 0.00 0.00 37.47 3.24
5036 12327 2.370281 TGCAACGAAGAGACTGATCC 57.630 50.000 0.00 0.00 0.00 3.36
5037 12328 1.272781 GCAACGAAGAGACTGATCCG 58.727 55.000 0.00 0.00 0.00 4.18
5038 12329 1.135373 GCAACGAAGAGACTGATCCGA 60.135 52.381 0.00 0.00 0.00 4.55
5039 12330 2.480416 GCAACGAAGAGACTGATCCGAT 60.480 50.000 0.00 0.00 0.00 4.18
5040 12331 3.111838 CAACGAAGAGACTGATCCGATG 58.888 50.000 0.00 0.00 0.00 3.84
5041 12332 1.678627 ACGAAGAGACTGATCCGATGG 59.321 52.381 0.00 0.00 0.00 3.51
5042 12333 1.678627 CGAAGAGACTGATCCGATGGT 59.321 52.381 0.00 0.00 0.00 3.55
5043 12334 2.099921 CGAAGAGACTGATCCGATGGTT 59.900 50.000 0.00 0.00 0.00 3.67
5044 12335 3.452474 GAAGAGACTGATCCGATGGTTG 58.548 50.000 0.00 0.00 0.00 3.77
5045 12336 2.461695 AGAGACTGATCCGATGGTTGT 58.538 47.619 0.00 0.00 0.00 3.32
5046 12337 3.632333 AGAGACTGATCCGATGGTTGTA 58.368 45.455 0.00 0.00 0.00 2.41
5047 12338 4.219115 AGAGACTGATCCGATGGTTGTAT 58.781 43.478 0.00 0.00 0.00 2.29
5048 12339 4.651503 AGAGACTGATCCGATGGTTGTATT 59.348 41.667 0.00 0.00 0.00 1.89
5049 12340 4.697514 AGACTGATCCGATGGTTGTATTG 58.302 43.478 0.00 0.00 0.00 1.90
5050 12341 3.808728 ACTGATCCGATGGTTGTATTGG 58.191 45.455 0.00 0.00 33.56 3.16
5051 12342 2.549754 CTGATCCGATGGTTGTATTGGC 59.450 50.000 0.00 0.00 32.50 4.52
5052 12343 2.172505 TGATCCGATGGTTGTATTGGCT 59.827 45.455 0.00 0.00 32.50 4.75
5053 12344 3.389656 TGATCCGATGGTTGTATTGGCTA 59.610 43.478 0.00 0.00 32.50 3.93
5054 12345 3.469008 TCCGATGGTTGTATTGGCTAG 57.531 47.619 0.00 0.00 32.50 3.42
5055 12346 3.035363 TCCGATGGTTGTATTGGCTAGA 58.965 45.455 0.00 0.00 32.50 2.43
5056 12347 3.069586 TCCGATGGTTGTATTGGCTAGAG 59.930 47.826 0.00 0.00 32.50 2.43
5057 12348 3.181465 CCGATGGTTGTATTGGCTAGAGT 60.181 47.826 0.00 0.00 0.00 3.24
5058 12349 4.038763 CCGATGGTTGTATTGGCTAGAGTA 59.961 45.833 0.00 0.00 0.00 2.59
5059 12350 5.279506 CCGATGGTTGTATTGGCTAGAGTAT 60.280 44.000 0.00 0.00 0.00 2.12
5060 12351 5.635280 CGATGGTTGTATTGGCTAGAGTATG 59.365 44.000 0.00 0.00 0.00 2.39
5061 12352 4.703897 TGGTTGTATTGGCTAGAGTATGC 58.296 43.478 0.00 0.00 0.00 3.14
5062 12353 4.163268 TGGTTGTATTGGCTAGAGTATGCA 59.837 41.667 0.00 0.00 0.00 3.96
5063 12354 4.511826 GGTTGTATTGGCTAGAGTATGCAC 59.488 45.833 0.00 0.00 0.00 4.57
5064 12355 5.360591 GTTGTATTGGCTAGAGTATGCACT 58.639 41.667 0.00 0.00 37.87 4.40
5065 12356 5.614324 TGTATTGGCTAGAGTATGCACTT 57.386 39.130 0.00 0.00 34.21 3.16
5066 12357 5.601662 TGTATTGGCTAGAGTATGCACTTC 58.398 41.667 0.00 0.00 34.21 3.01
5067 12358 5.363868 TGTATTGGCTAGAGTATGCACTTCT 59.636 40.000 0.00 0.00 34.21 2.85
5068 12359 6.549736 TGTATTGGCTAGAGTATGCACTTCTA 59.450 38.462 0.00 0.00 34.21 2.10
5069 12360 4.920640 TGGCTAGAGTATGCACTTCTAC 57.079 45.455 0.00 0.00 34.21 2.59
5070 12361 4.278310 TGGCTAGAGTATGCACTTCTACA 58.722 43.478 0.00 0.00 34.21 2.74
5071 12362 4.895889 TGGCTAGAGTATGCACTTCTACAT 59.104 41.667 0.00 0.00 34.21 2.29
5072 12363 5.363868 TGGCTAGAGTATGCACTTCTACATT 59.636 40.000 0.00 0.00 34.21 2.71
5073 12364 5.694006 GGCTAGAGTATGCACTTCTACATTG 59.306 44.000 0.00 0.00 34.21 2.82
5074 12365 6.276847 GCTAGAGTATGCACTTCTACATTGT 58.723 40.000 0.00 0.00 34.21 2.71
5075 12366 6.419413 GCTAGAGTATGCACTTCTACATTGTC 59.581 42.308 0.00 0.00 34.21 3.18
5076 12367 5.344066 AGAGTATGCACTTCTACATTGTCG 58.656 41.667 0.00 0.00 34.21 4.35
5077 12368 5.125578 AGAGTATGCACTTCTACATTGTCGA 59.874 40.000 0.00 0.00 34.21 4.20
5078 12369 5.907207 AGTATGCACTTCTACATTGTCGAT 58.093 37.500 0.00 0.00 0.00 3.59
5079 12370 5.980116 AGTATGCACTTCTACATTGTCGATC 59.020 40.000 0.00 0.00 0.00 3.69
5080 12371 3.179048 TGCACTTCTACATTGTCGATCG 58.821 45.455 9.36 9.36 0.00 3.69
5081 12372 3.119637 TGCACTTCTACATTGTCGATCGA 60.120 43.478 15.15 15.15 0.00 3.59
5082 12373 4.045104 GCACTTCTACATTGTCGATCGAT 58.955 43.478 22.50 7.28 0.00 3.59
5083 12374 5.212934 GCACTTCTACATTGTCGATCGATA 58.787 41.667 22.50 16.61 0.00 2.92
5084 12375 5.685954 GCACTTCTACATTGTCGATCGATAA 59.314 40.000 26.22 26.22 0.00 1.75
5085 12376 6.198403 GCACTTCTACATTGTCGATCGATAAA 59.802 38.462 27.44 21.28 0.00 1.40
5086 12377 7.253983 GCACTTCTACATTGTCGATCGATAAAA 60.254 37.037 27.44 19.06 0.00 1.52
5087 12378 8.755941 CACTTCTACATTGTCGATCGATAAAAT 58.244 33.333 27.44 20.57 0.00 1.82
5088 12379 8.969267 ACTTCTACATTGTCGATCGATAAAATC 58.031 33.333 27.44 12.13 0.00 2.17
5089 12380 8.865590 TTCTACATTGTCGATCGATAAAATCA 57.134 30.769 27.44 14.53 0.00 2.57
5090 12381 8.865590 TCTACATTGTCGATCGATAAAATCAA 57.134 30.769 27.44 21.37 0.00 2.57
5091 12382 9.476202 TCTACATTGTCGATCGATAAAATCAAT 57.524 29.630 27.44 22.45 0.00 2.57
5123 12414 9.678941 GACCGATTTCCAATTAATTTCTAATCC 57.321 33.333 0.00 0.00 0.00 3.01
5124 12415 9.421399 ACCGATTTCCAATTAATTTCTAATCCT 57.579 29.630 0.00 0.00 0.00 3.24
5134 12425 8.608844 ATTAATTTCTAATCCTTAGCTGACCG 57.391 34.615 0.00 0.00 33.23 4.79
5135 12426 5.871396 ATTTCTAATCCTTAGCTGACCGA 57.129 39.130 0.00 0.00 33.23 4.69
5136 12427 5.670792 TTTCTAATCCTTAGCTGACCGAA 57.329 39.130 0.00 0.00 33.23 4.30
5137 12428 5.670792 TTCTAATCCTTAGCTGACCGAAA 57.329 39.130 0.00 0.00 33.23 3.46
5138 12429 5.007385 TCTAATCCTTAGCTGACCGAAAC 57.993 43.478 0.00 0.00 33.23 2.78
5139 12430 2.295253 ATCCTTAGCTGACCGAAACG 57.705 50.000 0.00 0.00 0.00 3.60
5140 12431 0.389426 TCCTTAGCTGACCGAAACGC 60.389 55.000 0.00 0.00 0.00 4.84
5141 12432 0.389948 CCTTAGCTGACCGAAACGCT 60.390 55.000 0.00 0.00 36.56 5.07
5142 12433 1.135199 CCTTAGCTGACCGAAACGCTA 60.135 52.381 0.00 0.00 34.14 4.26
5143 12434 2.602878 CTTAGCTGACCGAAACGCTAA 58.397 47.619 0.00 0.00 41.21 3.09
5144 12435 1.986698 TAGCTGACCGAAACGCTAAC 58.013 50.000 0.00 0.00 32.53 2.34
5145 12436 0.032952 AGCTGACCGAAACGCTAACA 59.967 50.000 0.00 0.00 0.00 2.41
5146 12437 0.863144 GCTGACCGAAACGCTAACAA 59.137 50.000 0.00 0.00 0.00 2.83
5147 12438 1.398071 GCTGACCGAAACGCTAACAAC 60.398 52.381 0.00 0.00 0.00 3.32
5148 12439 1.862201 CTGACCGAAACGCTAACAACA 59.138 47.619 0.00 0.00 0.00 3.33
5149 12440 2.277969 TGACCGAAACGCTAACAACAA 58.722 42.857 0.00 0.00 0.00 2.83
5150 12441 2.676839 TGACCGAAACGCTAACAACAAA 59.323 40.909 0.00 0.00 0.00 2.83
5151 12442 3.242478 TGACCGAAACGCTAACAACAAAG 60.242 43.478 0.00 0.00 0.00 2.77
5152 12443 2.041244 CCGAAACGCTAACAACAAAGC 58.959 47.619 0.00 0.00 35.33 3.51
5153 12444 2.041244 CGAAACGCTAACAACAAAGCC 58.959 47.619 0.00 0.00 35.22 4.35
5154 12445 2.539953 CGAAACGCTAACAACAAAGCCA 60.540 45.455 0.00 0.00 35.22 4.75
5155 12446 3.638484 GAAACGCTAACAACAAAGCCAT 58.362 40.909 0.00 0.00 35.22 4.40
5156 12447 4.611807 CGAAACGCTAACAACAAAGCCATA 60.612 41.667 0.00 0.00 35.22 2.74
5157 12448 5.385509 AAACGCTAACAACAAAGCCATAT 57.614 34.783 0.00 0.00 35.22 1.78
5158 12449 4.616181 ACGCTAACAACAAAGCCATATC 57.384 40.909 0.00 0.00 35.22 1.63
5159 12450 3.377172 ACGCTAACAACAAAGCCATATCC 59.623 43.478 0.00 0.00 35.22 2.59
5160 12451 3.627577 CGCTAACAACAAAGCCATATCCT 59.372 43.478 0.00 0.00 35.22 3.24
5161 12452 4.260784 CGCTAACAACAAAGCCATATCCTC 60.261 45.833 0.00 0.00 35.22 3.71
5162 12453 4.640201 GCTAACAACAAAGCCATATCCTCA 59.360 41.667 0.00 0.00 32.40 3.86
5163 12454 5.125417 GCTAACAACAAAGCCATATCCTCAA 59.875 40.000 0.00 0.00 32.40 3.02
5164 12455 5.391312 AACAACAAAGCCATATCCTCAAC 57.609 39.130 0.00 0.00 0.00 3.18
5165 12456 4.406456 ACAACAAAGCCATATCCTCAACA 58.594 39.130 0.00 0.00 0.00 3.33
5166 12457 5.018809 ACAACAAAGCCATATCCTCAACAT 58.981 37.500 0.00 0.00 0.00 2.71
5167 12458 5.481473 ACAACAAAGCCATATCCTCAACATT 59.519 36.000 0.00 0.00 0.00 2.71
5168 12459 5.587388 ACAAAGCCATATCCTCAACATTG 57.413 39.130 0.00 0.00 0.00 2.82
5169 12460 5.263599 ACAAAGCCATATCCTCAACATTGA 58.736 37.500 0.00 0.00 35.57 2.57
5170 12461 5.895534 ACAAAGCCATATCCTCAACATTGAT 59.104 36.000 0.00 0.00 36.46 2.57
5171 12462 7.062322 ACAAAGCCATATCCTCAACATTGATA 58.938 34.615 0.00 0.00 36.46 2.15
5172 12463 7.013655 ACAAAGCCATATCCTCAACATTGATAC 59.986 37.037 0.00 0.00 36.46 2.24
5173 12464 6.445451 AGCCATATCCTCAACATTGATACT 57.555 37.500 0.00 0.00 36.46 2.12
5174 12465 7.559335 AGCCATATCCTCAACATTGATACTA 57.441 36.000 0.00 0.00 36.46 1.82
5175 12466 7.619050 AGCCATATCCTCAACATTGATACTAG 58.381 38.462 0.00 0.00 36.46 2.57
5176 12467 6.314896 GCCATATCCTCAACATTGATACTAGC 59.685 42.308 0.00 0.00 36.46 3.42
5177 12468 7.619050 CCATATCCTCAACATTGATACTAGCT 58.381 38.462 0.00 0.00 36.46 3.32
5178 12469 8.753133 CCATATCCTCAACATTGATACTAGCTA 58.247 37.037 0.00 0.00 36.46 3.32
5181 12472 7.898014 TCCTCAACATTGATACTAGCTAAGA 57.102 36.000 0.00 0.00 36.46 2.10
5182 12473 7.717568 TCCTCAACATTGATACTAGCTAAGAC 58.282 38.462 0.00 0.00 36.46 3.01
5183 12474 6.926272 CCTCAACATTGATACTAGCTAAGACC 59.074 42.308 0.00 0.00 36.46 3.85
5184 12475 7.201956 CCTCAACATTGATACTAGCTAAGACCT 60.202 40.741 0.00 0.00 36.46 3.85
5185 12476 8.079211 TCAACATTGATACTAGCTAAGACCTT 57.921 34.615 0.00 0.00 31.01 3.50
5186 12477 8.540388 TCAACATTGATACTAGCTAAGACCTTT 58.460 33.333 0.00 0.00 31.01 3.11
5187 12478 9.167311 CAACATTGATACTAGCTAAGACCTTTT 57.833 33.333 0.00 0.00 0.00 2.27
5188 12479 8.723942 ACATTGATACTAGCTAAGACCTTTTG 57.276 34.615 0.00 0.00 0.00 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.373450 TCTATCAGAATCCAGTAGCTCTTTTAT 57.627 33.333 0.00 0.00 0.00 1.40
7 8 7.563188 TCTCTATCAGAATCCAGTAGCTCTTTT 59.437 37.037 0.00 0.00 0.00 2.27
8 9 7.066142 TCTCTATCAGAATCCAGTAGCTCTTT 58.934 38.462 0.00 0.00 0.00 2.52
9 10 6.609876 TCTCTATCAGAATCCAGTAGCTCTT 58.390 40.000 0.00 0.00 0.00 2.85
10 11 6.199557 TCTCTATCAGAATCCAGTAGCTCT 57.800 41.667 0.00 0.00 0.00 4.09
11 12 5.415701 CCTCTCTATCAGAATCCAGTAGCTC 59.584 48.000 0.00 0.00 0.00 4.09
13 14 5.076873 ACCTCTCTATCAGAATCCAGTAGC 58.923 45.833 0.00 0.00 0.00 3.58
14 15 6.549364 ACAACCTCTCTATCAGAATCCAGTAG 59.451 42.308 0.00 0.00 0.00 2.57
15 16 6.436027 ACAACCTCTCTATCAGAATCCAGTA 58.564 40.000 0.00 0.00 0.00 2.74
16 17 5.276440 ACAACCTCTCTATCAGAATCCAGT 58.724 41.667 0.00 0.00 0.00 4.00
17 18 5.867903 ACAACCTCTCTATCAGAATCCAG 57.132 43.478 0.00 0.00 0.00 3.86
18 19 6.436027 ACTACAACCTCTCTATCAGAATCCA 58.564 40.000 0.00 0.00 0.00 3.41
19 20 6.969993 ACTACAACCTCTCTATCAGAATCC 57.030 41.667 0.00 0.00 0.00 3.01
20 21 9.344772 TCTAACTACAACCTCTCTATCAGAATC 57.655 37.037 0.00 0.00 0.00 2.52
21 22 9.349713 CTCTAACTACAACCTCTCTATCAGAAT 57.650 37.037 0.00 0.00 0.00 2.40
23 24 6.768861 GCTCTAACTACAACCTCTCTATCAGA 59.231 42.308 0.00 0.00 0.00 3.27
24 25 6.293190 CGCTCTAACTACAACCTCTCTATCAG 60.293 46.154 0.00 0.00 0.00 2.90
25 26 5.527951 CGCTCTAACTACAACCTCTCTATCA 59.472 44.000 0.00 0.00 0.00 2.15
26 27 5.049267 CCGCTCTAACTACAACCTCTCTATC 60.049 48.000 0.00 0.00 0.00 2.08
29 30 3.018149 CCGCTCTAACTACAACCTCTCT 58.982 50.000 0.00 0.00 0.00 3.10
30 31 2.754002 ACCGCTCTAACTACAACCTCTC 59.246 50.000 0.00 0.00 0.00 3.20
31 32 2.805194 ACCGCTCTAACTACAACCTCT 58.195 47.619 0.00 0.00 0.00 3.69
32 33 3.589495 AACCGCTCTAACTACAACCTC 57.411 47.619 0.00 0.00 0.00 3.85
34 35 3.778618 CCTAACCGCTCTAACTACAACC 58.221 50.000 0.00 0.00 0.00 3.77
35 36 3.185330 GCCTAACCGCTCTAACTACAAC 58.815 50.000 0.00 0.00 0.00 3.32
36 37 2.159338 CGCCTAACCGCTCTAACTACAA 60.159 50.000 0.00 0.00 0.00 2.41
38 39 2.116787 CGCCTAACCGCTCTAACTAC 57.883 55.000 0.00 0.00 0.00 2.73
48 49 1.369625 ATTTCTTGAGCGCCTAACCG 58.630 50.000 2.29 0.00 0.00 4.44
51 52 2.504175 ACCCTATTTCTTGAGCGCCTAA 59.496 45.455 2.29 0.00 0.00 2.69
52 53 2.116238 ACCCTATTTCTTGAGCGCCTA 58.884 47.619 2.29 0.00 0.00 3.93
54 55 1.751437 AACCCTATTTCTTGAGCGCC 58.249 50.000 2.29 0.00 0.00 6.53
55 56 3.532542 ACTAACCCTATTTCTTGAGCGC 58.467 45.455 0.00 0.00 0.00 5.92
56 57 4.755411 TGACTAACCCTATTTCTTGAGCG 58.245 43.478 0.00 0.00 0.00 5.03
57 58 6.349300 TCATGACTAACCCTATTTCTTGAGC 58.651 40.000 0.00 0.00 0.00 4.26
58 59 6.481644 GCTCATGACTAACCCTATTTCTTGAG 59.518 42.308 0.00 0.00 39.62 3.02
59 60 6.156949 AGCTCATGACTAACCCTATTTCTTGA 59.843 38.462 0.00 0.00 0.00 3.02
60 61 6.352516 AGCTCATGACTAACCCTATTTCTTG 58.647 40.000 0.00 0.00 0.00 3.02
62 63 6.352516 CAAGCTCATGACTAACCCTATTTCT 58.647 40.000 0.00 0.00 0.00 2.52
63 64 5.008118 GCAAGCTCATGACTAACCCTATTTC 59.992 44.000 0.00 0.00 0.00 2.17
64 65 4.884164 GCAAGCTCATGACTAACCCTATTT 59.116 41.667 0.00 0.00 0.00 1.40
66 67 3.713764 AGCAAGCTCATGACTAACCCTAT 59.286 43.478 0.00 0.00 0.00 2.57
67 68 3.107601 AGCAAGCTCATGACTAACCCTA 58.892 45.455 0.00 0.00 0.00 3.53
68 69 1.912043 AGCAAGCTCATGACTAACCCT 59.088 47.619 0.00 0.00 0.00 4.34
69 70 2.409948 AGCAAGCTCATGACTAACCC 57.590 50.000 0.00 0.00 0.00 4.11
70 71 3.133003 TCCTAGCAAGCTCATGACTAACC 59.867 47.826 0.00 0.00 0.00 2.85
71 72 4.392921 TCCTAGCAAGCTCATGACTAAC 57.607 45.455 0.00 0.00 0.00 2.34
72 73 5.363101 CAATCCTAGCAAGCTCATGACTAA 58.637 41.667 0.00 0.00 0.00 2.24
73 74 4.202295 CCAATCCTAGCAAGCTCATGACTA 60.202 45.833 0.00 0.00 0.00 2.59
74 75 3.433314 CCAATCCTAGCAAGCTCATGACT 60.433 47.826 0.00 0.00 0.00 3.41
77 78 2.158711 TCCCAATCCTAGCAAGCTCATG 60.159 50.000 0.00 0.00 0.00 3.07
78 79 2.106166 CTCCCAATCCTAGCAAGCTCAT 59.894 50.000 0.00 0.00 0.00 2.90
79 80 1.487976 CTCCCAATCCTAGCAAGCTCA 59.512 52.381 0.00 0.00 0.00 4.26
80 81 1.765314 TCTCCCAATCCTAGCAAGCTC 59.235 52.381 0.00 0.00 0.00 4.09
81 82 1.767681 CTCTCCCAATCCTAGCAAGCT 59.232 52.381 0.00 0.00 0.00 3.74
82 83 1.488393 ACTCTCCCAATCCTAGCAAGC 59.512 52.381 0.00 0.00 0.00 4.01
83 84 3.198635 TCAACTCTCCCAATCCTAGCAAG 59.801 47.826 0.00 0.00 0.00 4.01
86 87 3.135530 ACATCAACTCTCCCAATCCTAGC 59.864 47.826 0.00 0.00 0.00 3.42
88 89 6.884472 TTAACATCAACTCTCCCAATCCTA 57.116 37.500 0.00 0.00 0.00 2.94
89 90 5.779241 TTAACATCAACTCTCCCAATCCT 57.221 39.130 0.00 0.00 0.00 3.24
90 91 6.350194 GGTTTTAACATCAACTCTCCCAATCC 60.350 42.308 0.00 0.00 0.00 3.01
91 92 6.621613 GGTTTTAACATCAACTCTCCCAATC 58.378 40.000 0.00 0.00 0.00 2.67
92 93 5.183140 CGGTTTTAACATCAACTCTCCCAAT 59.817 40.000 0.00 0.00 0.00 3.16
94 95 4.069304 CGGTTTTAACATCAACTCTCCCA 58.931 43.478 0.00 0.00 0.00 4.37
95 96 3.119955 GCGGTTTTAACATCAACTCTCCC 60.120 47.826 0.00 0.00 0.00 4.30
96 97 3.500680 TGCGGTTTTAACATCAACTCTCC 59.499 43.478 0.00 0.00 0.00 3.71
97 98 4.213482 ACTGCGGTTTTAACATCAACTCTC 59.787 41.667 0.00 0.00 0.00 3.20
98 99 4.134563 ACTGCGGTTTTAACATCAACTCT 58.865 39.130 0.00 0.00 0.00 3.24
99 100 4.213482 AGACTGCGGTTTTAACATCAACTC 59.787 41.667 0.00 0.00 0.00 3.01
100 101 4.024048 CAGACTGCGGTTTTAACATCAACT 60.024 41.667 0.00 0.00 0.00 3.16
101 102 4.219033 CAGACTGCGGTTTTAACATCAAC 58.781 43.478 0.00 0.00 0.00 3.18
104 105 2.812011 ACCAGACTGCGGTTTTAACATC 59.188 45.455 0.00 0.00 30.53 3.06
106 107 2.335316 ACCAGACTGCGGTTTTAACA 57.665 45.000 0.00 0.00 30.53 2.41
107 108 2.614983 TCAACCAGACTGCGGTTTTAAC 59.385 45.455 0.00 0.00 44.46 2.01
109 110 2.489971 CTCAACCAGACTGCGGTTTTA 58.510 47.619 0.00 0.00 44.46 1.52
110 111 1.308998 CTCAACCAGACTGCGGTTTT 58.691 50.000 0.00 0.00 44.46 2.43
111 112 0.535102 CCTCAACCAGACTGCGGTTT 60.535 55.000 0.00 0.00 44.46 3.27
113 114 2.100879 GACCTCAACCAGACTGCGGT 62.101 60.000 0.00 0.00 38.85 5.68
114 115 1.374758 GACCTCAACCAGACTGCGG 60.375 63.158 0.00 0.00 0.00 5.69
115 116 1.374758 GGACCTCAACCAGACTGCG 60.375 63.158 0.00 0.00 0.00 5.18
118 119 2.584391 GCCGGACCTCAACCAGACT 61.584 63.158 5.05 0.00 0.00 3.24
119 120 2.047179 GCCGGACCTCAACCAGAC 60.047 66.667 5.05 0.00 0.00 3.51
121 122 4.410400 GGGCCGGACCTCAACCAG 62.410 72.222 23.07 0.00 39.10 4.00
123 124 2.781431 ATTTGGGCCGGACCTCAACC 62.781 60.000 30.93 5.53 39.10 3.77
124 125 0.034863 TATTTGGGCCGGACCTCAAC 60.035 55.000 30.93 0.00 39.10 3.18
125 126 0.254747 CTATTTGGGCCGGACCTCAA 59.745 55.000 30.93 21.23 39.10 3.02
128 129 3.331293 CCTATTTGGGCCGGACCT 58.669 61.111 30.93 10.54 39.10 3.85
137 138 7.335627 TCACATAGTTCTACAACCCTATTTGG 58.664 38.462 0.00 0.00 32.22 3.28
138 139 8.258007 TCTCACATAGTTCTACAACCCTATTTG 58.742 37.037 0.00 0.00 32.22 2.32
141 142 7.015682 CCATCTCACATAGTTCTACAACCCTAT 59.984 40.741 0.00 0.00 32.22 2.57
142 143 6.323996 CCATCTCACATAGTTCTACAACCCTA 59.676 42.308 0.00 0.00 32.22 3.53
143 144 5.129485 CCATCTCACATAGTTCTACAACCCT 59.871 44.000 0.00 0.00 32.22 4.34
145 146 6.222038 TCCATCTCACATAGTTCTACAACC 57.778 41.667 0.00 0.00 32.22 3.77
146 147 7.492524 TGATCCATCTCACATAGTTCTACAAC 58.507 38.462 0.00 0.00 0.00 3.32
147 148 7.660030 TGATCCATCTCACATAGTTCTACAA 57.340 36.000 0.00 0.00 0.00 2.41
148 149 7.846101 ATGATCCATCTCACATAGTTCTACA 57.154 36.000 0.00 0.00 0.00 2.74
149 150 8.584157 AGAATGATCCATCTCACATAGTTCTAC 58.416 37.037 0.00 0.00 0.00 2.59
152 153 7.440198 TCAGAATGATCCATCTCACATAGTTC 58.560 38.462 0.00 0.00 42.56 3.01
153 154 7.370905 TCAGAATGATCCATCTCACATAGTT 57.629 36.000 0.00 0.00 42.56 2.24
154 155 6.990908 TCAGAATGATCCATCTCACATAGT 57.009 37.500 0.00 0.00 42.56 2.12
170 171 7.812690 TCATTAATCAACCTGGATCAGAATG 57.187 36.000 0.00 3.48 32.44 2.67
172 173 8.648698 TTTTCATTAATCAACCTGGATCAGAA 57.351 30.769 0.00 0.00 32.44 3.02
173 174 8.522830 GTTTTTCATTAATCAACCTGGATCAGA 58.477 33.333 0.00 0.00 32.44 3.27
174 175 7.761249 GGTTTTTCATTAATCAACCTGGATCAG 59.239 37.037 0.00 0.00 35.05 2.90
175 176 7.310361 GGGTTTTTCATTAATCAACCTGGATCA 60.310 37.037 0.00 0.00 37.61 2.92
177 178 6.070251 GGGGTTTTTCATTAATCAACCTGGAT 60.070 38.462 0.00 0.00 37.61 3.41
178 179 5.247337 GGGGTTTTTCATTAATCAACCTGGA 59.753 40.000 0.00 0.00 37.61 3.86
179 180 5.248248 AGGGGTTTTTCATTAATCAACCTGG 59.752 40.000 12.11 0.00 37.61 4.45
180 181 6.358974 AGGGGTTTTTCATTAATCAACCTG 57.641 37.500 12.11 0.00 37.61 4.00
181 182 7.387265 AAAGGGGTTTTTCATTAATCAACCT 57.613 32.000 12.11 0.00 37.61 3.50
182 183 6.653320 GGAAAGGGGTTTTTCATTAATCAACC 59.347 38.462 6.76 6.76 38.51 3.77
183 184 6.653320 GGGAAAGGGGTTTTTCATTAATCAAC 59.347 38.462 1.52 0.00 38.51 3.18
184 185 6.240031 GGGGAAAGGGGTTTTTCATTAATCAA 60.240 38.462 1.52 0.00 38.51 2.57
186 187 5.338871 GGGGGAAAGGGGTTTTTCATTAATC 60.339 44.000 1.52 0.00 38.51 1.75
187 188 4.538490 GGGGGAAAGGGGTTTTTCATTAAT 59.462 41.667 1.52 0.00 38.51 1.40
190 191 2.344592 GGGGGAAAGGGGTTTTTCATT 58.655 47.619 1.52 0.00 38.51 2.57
191 192 2.038863 GGGGGAAAGGGGTTTTTCAT 57.961 50.000 1.52 0.00 38.51 2.57
192 193 3.562141 GGGGGAAAGGGGTTTTTCA 57.438 52.632 1.52 0.00 38.51 2.69
232 233 9.922305 GACTCGACATTTTCATTAATTAAGGAG 57.078 33.333 11.94 4.41 0.00 3.69
233 234 9.667107 AGACTCGACATTTTCATTAATTAAGGA 57.333 29.630 8.43 8.43 0.00 3.36
253 3399 3.691049 TGAAACAAGGCAAAAGACTCG 57.309 42.857 0.00 0.00 0.00 4.18
281 3427 4.625607 AGGTCCTTCTTCGAACAGATTT 57.374 40.909 0.00 0.00 0.00 2.17
282 3428 5.163395 GGATAGGTCCTTCTTCGAACAGATT 60.163 44.000 0.00 0.00 41.60 2.40
283 3429 4.342665 GGATAGGTCCTTCTTCGAACAGAT 59.657 45.833 0.00 0.00 41.60 2.90
284 3430 3.700038 GGATAGGTCCTTCTTCGAACAGA 59.300 47.826 0.00 0.00 41.60 3.41
328 3478 2.432628 CTCCAAGACGGTGGCGTC 60.433 66.667 0.00 0.00 38.68 5.19
333 3483 2.135933 GAAACTGACTCCAAGACGGTG 58.864 52.381 0.00 0.00 30.32 4.94
335 3485 1.608283 GGGAAACTGACTCCAAGACGG 60.608 57.143 0.00 0.00 34.34 4.79
336 3486 1.797025 GGGAAACTGACTCCAAGACG 58.203 55.000 3.00 0.00 34.34 4.18
337 3487 1.797025 CGGGAAACTGACTCCAAGAC 58.203 55.000 3.00 0.00 39.98 3.01
338 3488 0.034896 GCGGGAAACTGACTCCAAGA 59.965 55.000 3.00 0.00 39.98 3.02
339 3489 0.250295 TGCGGGAAACTGACTCCAAG 60.250 55.000 3.00 0.00 39.98 3.61
340 3490 0.400213 ATGCGGGAAACTGACTCCAA 59.600 50.000 3.00 0.00 39.98 3.53
341 3491 0.321564 CATGCGGGAAACTGACTCCA 60.322 55.000 3.00 0.00 39.98 3.86
342 3492 0.036388 TCATGCGGGAAACTGACTCC 60.036 55.000 0.00 0.00 39.98 3.85
343 3493 1.363744 CTCATGCGGGAAACTGACTC 58.636 55.000 0.00 0.00 39.98 3.36
344 3494 0.674895 GCTCATGCGGGAAACTGACT 60.675 55.000 0.00 0.00 39.98 3.41
345 3495 0.674895 AGCTCATGCGGGAAACTGAC 60.675 55.000 0.00 0.00 45.42 3.51
346 3496 0.036732 AAGCTCATGCGGGAAACTGA 59.963 50.000 0.00 0.00 45.42 3.41
347 3497 0.449388 GAAGCTCATGCGGGAAACTG 59.551 55.000 0.00 0.00 45.42 3.16
348 3498 0.326264 AGAAGCTCATGCGGGAAACT 59.674 50.000 0.00 0.00 45.42 2.66
349 3499 0.449388 CAGAAGCTCATGCGGGAAAC 59.551 55.000 0.00 0.00 45.42 2.78
350 3500 0.677731 CCAGAAGCTCATGCGGGAAA 60.678 55.000 0.00 0.00 45.42 3.13
351 3501 1.078214 CCAGAAGCTCATGCGGGAA 60.078 57.895 0.00 0.00 45.42 3.97
352 3502 1.340399 ATCCAGAAGCTCATGCGGGA 61.340 55.000 0.00 0.00 45.42 5.14
353 3503 0.394192 TATCCAGAAGCTCATGCGGG 59.606 55.000 0.00 0.00 45.42 6.13
354 3504 1.506493 GTATCCAGAAGCTCATGCGG 58.494 55.000 0.00 0.00 45.42 5.69
355 3505 1.506493 GGTATCCAGAAGCTCATGCG 58.494 55.000 0.00 0.00 45.42 4.73
356 3506 1.141657 TGGGTATCCAGAAGCTCATGC 59.858 52.381 0.00 0.00 38.32 4.06
357 3507 2.486191 GGTGGGTATCCAGAAGCTCATG 60.486 54.545 0.00 0.00 45.05 3.07
358 3508 1.771255 GGTGGGTATCCAGAAGCTCAT 59.229 52.381 0.00 0.00 45.05 2.90
359 3509 1.204146 GGTGGGTATCCAGAAGCTCA 58.796 55.000 0.00 0.00 45.05 4.26
360 3510 1.204146 TGGTGGGTATCCAGAAGCTC 58.796 55.000 0.00 0.00 45.05 4.09
361 3511 1.771255 GATGGTGGGTATCCAGAAGCT 59.229 52.381 0.00 0.00 45.05 3.74
362 3512 1.771255 AGATGGTGGGTATCCAGAAGC 59.229 52.381 0.00 0.00 45.05 3.86
363 3513 2.036475 CGAGATGGTGGGTATCCAGAAG 59.964 54.545 0.00 0.00 45.05 2.85
364 3514 2.039418 CGAGATGGTGGGTATCCAGAA 58.961 52.381 0.00 0.00 45.05 3.02
365 3515 1.063190 ACGAGATGGTGGGTATCCAGA 60.063 52.381 0.00 0.00 45.05 3.86
366 3516 1.414158 ACGAGATGGTGGGTATCCAG 58.586 55.000 0.00 0.00 45.05 3.86
367 3517 1.874129 AACGAGATGGTGGGTATCCA 58.126 50.000 0.00 0.00 41.58 3.41
368 3518 2.561569 CAAACGAGATGGTGGGTATCC 58.438 52.381 0.00 0.00 0.00 2.59
369 3519 1.940613 GCAAACGAGATGGTGGGTATC 59.059 52.381 0.00 0.00 0.00 2.24
370 3520 1.559682 AGCAAACGAGATGGTGGGTAT 59.440 47.619 0.00 0.00 0.00 2.73
371 3521 0.981183 AGCAAACGAGATGGTGGGTA 59.019 50.000 0.00 0.00 0.00 3.69
372 3522 0.606401 CAGCAAACGAGATGGTGGGT 60.606 55.000 9.89 0.00 41.38 4.51
373 3523 2.174334 CAGCAAACGAGATGGTGGG 58.826 57.895 9.89 0.00 41.38 4.61
375 3525 1.503542 GCCAGCAAACGAGATGGTG 59.496 57.895 11.73 11.11 46.53 4.17
376 3526 2.034879 CGCCAGCAAACGAGATGGT 61.035 57.895 11.73 0.67 46.53 3.55
378 3528 1.291184 TGTCGCCAGCAAACGAGATG 61.291 55.000 0.00 0.00 39.30 2.90
379 3529 0.602638 TTGTCGCCAGCAAACGAGAT 60.603 50.000 0.00 0.00 39.30 2.75
380 3530 1.221466 CTTGTCGCCAGCAAACGAGA 61.221 55.000 0.00 0.00 39.30 4.04
381 3531 1.205064 CTTGTCGCCAGCAAACGAG 59.795 57.895 0.00 0.00 39.30 4.18
382 3532 1.092921 AACTTGTCGCCAGCAAACGA 61.093 50.000 0.00 0.00 35.62 3.85
383 3533 0.248458 AAACTTGTCGCCAGCAAACG 60.248 50.000 0.00 0.00 0.00 3.60
388 3538 0.179215 CGATGAAACTTGTCGCCAGC 60.179 55.000 0.00 0.00 0.00 4.85
416 3566 2.915659 TCGCCGTCTCTTGTGGGT 60.916 61.111 0.00 0.00 0.00 4.51
447 3597 4.355720 TGCCTTCCCTGCCTGCAG 62.356 66.667 12.17 12.17 43.26 4.41
504 3689 5.539048 CTCTAGGAAACCAGAAGAAAACGA 58.461 41.667 0.00 0.00 0.00 3.85
505 3690 4.152580 GCTCTAGGAAACCAGAAGAAAACG 59.847 45.833 0.00 0.00 0.00 3.60
506 3691 5.309638 AGCTCTAGGAAACCAGAAGAAAAC 58.690 41.667 0.00 0.00 0.00 2.43
507 3692 5.568620 AGCTCTAGGAAACCAGAAGAAAA 57.431 39.130 0.00 0.00 0.00 2.29
508 3693 6.405953 CGATAGCTCTAGGAAACCAGAAGAAA 60.406 42.308 0.00 0.00 0.00 2.52
509 3694 5.067936 CGATAGCTCTAGGAAACCAGAAGAA 59.932 44.000 0.00 0.00 0.00 2.52
510 3695 4.580995 CGATAGCTCTAGGAAACCAGAAGA 59.419 45.833 0.00 0.00 0.00 2.87
511 3696 4.580995 TCGATAGCTCTAGGAAACCAGAAG 59.419 45.833 0.00 0.00 0.00 2.85
512 3697 4.533815 TCGATAGCTCTAGGAAACCAGAA 58.466 43.478 0.00 0.00 0.00 3.02
513 3698 4.166246 TCGATAGCTCTAGGAAACCAGA 57.834 45.455 0.00 0.00 0.00 3.86
514 3699 4.082463 GGATCGATAGCTCTAGGAAACCAG 60.082 50.000 0.00 0.00 0.00 4.00
515 3700 3.827302 GGATCGATAGCTCTAGGAAACCA 59.173 47.826 0.00 0.00 0.00 3.67
516 3701 3.827302 TGGATCGATAGCTCTAGGAAACC 59.173 47.826 0.00 0.00 0.00 3.27
517 3702 5.221263 TGTTGGATCGATAGCTCTAGGAAAC 60.221 44.000 0.00 0.00 0.00 2.78
518 3703 4.893524 TGTTGGATCGATAGCTCTAGGAAA 59.106 41.667 0.00 0.00 0.00 3.13
519 3704 4.470602 TGTTGGATCGATAGCTCTAGGAA 58.529 43.478 0.00 0.00 0.00 3.36
520 3705 4.100279 TGTTGGATCGATAGCTCTAGGA 57.900 45.455 0.00 0.00 0.00 2.94
521 3706 4.551388 GTTGTTGGATCGATAGCTCTAGG 58.449 47.826 0.00 0.00 0.00 3.02
522 3707 4.551388 GGTTGTTGGATCGATAGCTCTAG 58.449 47.826 0.00 0.00 0.00 2.43
523 3708 3.004419 CGGTTGTTGGATCGATAGCTCTA 59.996 47.826 0.00 0.00 0.00 2.43
524 3709 2.223829 CGGTTGTTGGATCGATAGCTCT 60.224 50.000 0.00 0.00 0.00 4.09
525 3710 2.128035 CGGTTGTTGGATCGATAGCTC 58.872 52.381 0.00 0.00 0.00 4.09
526 3711 1.806623 GCGGTTGTTGGATCGATAGCT 60.807 52.381 0.00 0.00 0.00 3.32
527 3712 0.582005 GCGGTTGTTGGATCGATAGC 59.418 55.000 0.00 0.00 0.00 2.97
528 3713 1.934589 TGCGGTTGTTGGATCGATAG 58.065 50.000 0.00 0.00 0.00 2.08
529 3714 2.613026 ATGCGGTTGTTGGATCGATA 57.387 45.000 0.00 0.00 0.00 2.92
530 3715 1.750193 AATGCGGTTGTTGGATCGAT 58.250 45.000 0.00 0.00 0.00 3.59
541 3726 5.350633 CCATGTGAATGAATTAATGCGGTT 58.649 37.500 0.00 0.00 0.00 4.44
569 3754 3.915437 AACCGATCAAGCGTTCAATTT 57.085 38.095 0.00 0.00 0.00 1.82
617 3808 2.080693 ACCAATTCTTCATGCGCGTTA 58.919 42.857 8.43 0.00 0.00 3.18
622 3813 0.813184 AGCCACCAATTCTTCATGCG 59.187 50.000 0.00 0.00 0.00 4.73
658 3849 1.535833 TCTCGGTCCAAGTCTCAGTC 58.464 55.000 0.00 0.00 0.00 3.51
671 5642 0.828677 CGGGGTTCCTAAATCTCGGT 59.171 55.000 0.00 0.00 35.77 4.69
672 5643 0.828677 ACGGGGTTCCTAAATCTCGG 59.171 55.000 0.00 0.00 44.03 4.63
673 5644 2.277084 CAACGGGGTTCCTAAATCTCG 58.723 52.381 0.00 0.00 45.29 4.04
674 5645 2.640184 CCAACGGGGTTCCTAAATCTC 58.360 52.381 0.00 0.00 0.00 2.75
683 5668 4.960866 AACGGGCCAACGGGGTTC 62.961 66.667 4.39 0.00 39.65 3.62
687 5672 3.361977 CAAGAACGGGCCAACGGG 61.362 66.667 4.39 0.00 38.39 5.28
690 5675 1.132453 GCTAATCAAGAACGGGCCAAC 59.868 52.381 4.39 0.00 0.00 3.77
691 5676 1.271652 TGCTAATCAAGAACGGGCCAA 60.272 47.619 4.39 0.00 0.00 4.52
692 5677 0.326595 TGCTAATCAAGAACGGGCCA 59.673 50.000 4.39 0.00 0.00 5.36
693 5678 0.733150 GTGCTAATCAAGAACGGGCC 59.267 55.000 0.00 0.00 0.00 5.80
694 5679 0.733150 GGTGCTAATCAAGAACGGGC 59.267 55.000 0.00 0.00 34.02 6.13
695 5680 2.107950 TGGTGCTAATCAAGAACGGG 57.892 50.000 0.00 0.00 34.02 5.28
696 5681 3.270027 TCATGGTGCTAATCAAGAACGG 58.730 45.455 0.00 0.00 34.02 4.44
697 5682 4.944962 TTCATGGTGCTAATCAAGAACG 57.055 40.909 0.00 0.00 34.02 3.95
698 5683 5.098211 GCTTTCATGGTGCTAATCAAGAAC 58.902 41.667 0.00 0.00 32.12 3.01
745 5730 5.657302 AGTTAGTTAGTGTACCATCTGGGAG 59.343 44.000 0.54 0.00 41.15 4.30
751 5736 6.276832 TGACCAGTTAGTTAGTGTACCATC 57.723 41.667 0.00 0.00 0.00 3.51
761 5746 8.598916 TGAACAATTATCCTGACCAGTTAGTTA 58.401 33.333 0.00 0.00 0.00 2.24
801 5786 3.964909 AGTAAAGCCGAGCAAACAAAAG 58.035 40.909 0.00 0.00 0.00 2.27
805 5790 1.606668 CCAAGTAAAGCCGAGCAAACA 59.393 47.619 0.00 0.00 0.00 2.83
813 5798 2.877691 GGCTGCCAAGTAAAGCCG 59.122 61.111 15.17 0.00 46.50 5.52
831 5816 0.253327 GGGAAGATTCGTGGAAGCCT 59.747 55.000 0.00 0.00 0.00 4.58
844 5829 1.578897 TCACGATGGGAATGGGAAGA 58.421 50.000 0.00 0.00 0.00 2.87
871 5889 2.433491 TGTATGCGTGTGGACGGC 60.433 61.111 0.00 0.00 46.20 5.68
907 5953 2.740055 CGTGAGCAAAGCGAGGCT 60.740 61.111 0.00 0.00 44.48 4.58
916 5962 1.899814 AGGAGTAATGGTCGTGAGCAA 59.100 47.619 5.79 0.00 42.53 3.91
949 5995 1.114722 ATGGTTGTTGCCTGGTGGTG 61.115 55.000 0.00 0.00 35.27 4.17
961 6007 2.229792 CTACACAAGTGCCATGGTTGT 58.770 47.619 14.67 13.27 34.72 3.32
964 6010 0.955428 CGCTACACAAGTGCCATGGT 60.955 55.000 14.67 0.00 0.00 3.55
1113 6159 2.989253 TCACGCTCGAGGAAGGCA 60.989 61.111 15.58 0.00 0.00 4.75
1164 6210 1.519719 GAGCTCTTCCATGTCCGCT 59.480 57.895 6.43 0.00 0.00 5.52
1227 6280 1.262417 TGCACTCCTCCATGTCGTAA 58.738 50.000 0.00 0.00 0.00 3.18
1593 6692 0.178873 TGGCTAGGGTGGTCTTTCCT 60.179 55.000 0.00 0.00 37.07 3.36
1608 6707 0.760567 TGCGATAGGTCTCCATGGCT 60.761 55.000 6.96 0.14 0.00 4.75
1747 6852 1.219393 CTTTCTCCCACCTCTCCGC 59.781 63.158 0.00 0.00 0.00 5.54
1903 7196 9.191479 ACACTATTAGTTAAGCTCACTACATCT 57.809 33.333 5.42 0.00 0.00 2.90
2086 7413 2.905075 CATTTGATAGAGCCGACCACA 58.095 47.619 0.00 0.00 0.00 4.17
2123 7450 8.889717 TCTTAAAGAACAATATTCGGGAATCAC 58.110 33.333 0.00 0.00 32.50 3.06
2157 7485 1.625818 GGGAAGGAGCTTTCTGAGTCA 59.374 52.381 0.00 0.00 0.00 3.41
2174 7502 3.870559 ACCTTTTCTAGTTGAGGAGGGA 58.129 45.455 12.73 0.00 34.71 4.20
2775 9494 8.941977 ACATTAAATGAGCGAACATGTAACTTA 58.058 29.630 0.00 0.00 34.23 2.24
2945 9670 1.537135 GCTCTGTGATTCCTAGTCCGC 60.537 57.143 0.00 0.00 0.00 5.54
3099 9842 6.211184 TGTTCCCAAACATATCAGCAGAAAAT 59.789 34.615 0.00 0.00 40.45 1.82
3174 9920 8.267183 AGATGTCCAAACTCTTCCAAAATTTTT 58.733 29.630 0.00 0.00 0.00 1.94
3229 9975 2.622447 GCCACCACCCCCATAACCT 61.622 63.158 0.00 0.00 0.00 3.50
3254 10000 7.254852 TCGATAGCATTTAACATTCCCAAAAC 58.745 34.615 0.00 0.00 0.00 2.43
3283 10029 0.606604 TTTAGAGACGACCCCAGTGC 59.393 55.000 0.00 0.00 0.00 4.40
3384 10133 3.425162 AGATCTTGGAGGTGTGGAAAC 57.575 47.619 0.00 0.00 0.00 2.78
3411 10160 1.838112 TCCTTTCCATGTCATGCACC 58.162 50.000 7.35 0.00 0.00 5.01
3430 10182 0.262876 GAGGCCATTCCCTTGGGAAT 59.737 55.000 24.11 24.11 38.92 3.01
3459 10211 4.161565 ACTGCTATCTCCAATTTCACGGTA 59.838 41.667 0.00 0.00 0.00 4.02
3498 10250 3.199508 CCATGAGAATGTGGAGACCTTCT 59.800 47.826 0.00 0.00 39.11 2.85
3550 10302 2.344872 GCCACGAAACCCTACCGT 59.655 61.111 0.00 0.00 36.95 4.83
3561 10313 2.662596 GGACTCATGGTGCCACGA 59.337 61.111 0.00 0.00 0.00 4.35
3781 10545 1.072331 AGTTTCGACCTGGAGTTGCAT 59.928 47.619 0.00 0.00 0.00 3.96
3840 10604 1.818131 GCTTTTTCAACGGGACCCTCT 60.818 52.381 9.41 0.00 0.00 3.69
3976 10829 1.273327 CTCCAACATGGCCAAAGGAAC 59.727 52.381 10.96 0.00 37.47 3.62
4025 11099 3.216187 TGGAATGAAGAAACCAACGGA 57.784 42.857 0.00 0.00 0.00 4.69
4086 11165 0.671781 CTTCTTGCTGTCGTGGAGGG 60.672 60.000 0.00 0.00 0.00 4.30
4094 11173 4.876125 TCGGATGATATCTTCTTGCTGTC 58.124 43.478 15.90 0.38 0.00 3.51
4095 11174 4.944619 TCGGATGATATCTTCTTGCTGT 57.055 40.909 15.90 0.00 0.00 4.40
4108 11187 1.043816 AGAGCACGGAATCGGATGAT 58.956 50.000 0.00 0.00 41.39 2.45
4109 11188 0.103026 CAGAGCACGGAATCGGATGA 59.897 55.000 0.00 0.00 41.39 2.92
4110 11189 1.493950 GCAGAGCACGGAATCGGATG 61.494 60.000 0.00 0.00 41.39 3.51
4111 11190 1.227380 GCAGAGCACGGAATCGGAT 60.227 57.895 0.00 0.00 41.39 4.18
4113 11192 2.892425 GGCAGAGCACGGAATCGG 60.892 66.667 0.00 0.00 41.39 4.18
4114 11193 1.091771 AATGGCAGAGCACGGAATCG 61.092 55.000 0.00 0.00 43.02 3.34
4117 11220 1.448985 GTAAATGGCAGAGCACGGAA 58.551 50.000 0.00 0.00 0.00 4.30
4201 11304 9.429359 GTAAGATAAATCAGTGAATCGGATGAT 57.571 33.333 0.00 0.00 35.98 2.45
4244 11347 5.846714 AGGTATAATCTTAGCAGTCACCCAT 59.153 40.000 0.00 0.00 0.00 4.00
4303 11406 2.930040 CTGATTAATCGCTTGTCACGGT 59.070 45.455 10.80 0.00 0.00 4.83
4346 11449 1.632018 TTTCTGACCATAGGGGCCCG 61.632 60.000 18.95 5.08 44.10 6.13
4369 11472 1.969923 TGAAGGGAAGGCCATGTTTTG 59.030 47.619 5.01 0.00 35.15 2.44
4410 11513 2.025037 TCCAGTTGAATGGGGGATGAAG 60.025 50.000 0.00 0.00 41.01 3.02
4528 11631 1.486997 ATCACCAGTGTGCTCCAGCT 61.487 55.000 0.00 0.00 42.46 4.24
4563 11666 5.200483 TCCCAGGTTCCAAGCAATAATAAG 58.800 41.667 0.00 0.00 0.00 1.73
4600 11703 7.119699 CACTTCTACAGACAATTAATCAGCCAA 59.880 37.037 0.00 0.00 0.00 4.52
4611 11714 3.937706 GAGCATGCACTTCTACAGACAAT 59.062 43.478 21.98 0.00 0.00 2.71
4617 11720 2.159043 GGCTAGAGCATGCACTTCTACA 60.159 50.000 22.83 3.70 44.36 2.74
4650 11753 4.764823 AGTATCTTCCATCAGATCGGTCTC 59.235 45.833 0.00 0.00 35.08 3.36
4652 11755 5.124776 CCTAGTATCTTCCATCAGATCGGTC 59.875 48.000 0.00 0.00 35.08 4.79
4661 11764 3.070159 TGTGCTGCCTAGTATCTTCCATC 59.930 47.826 0.00 0.00 0.00 3.51
4670 11773 4.581409 TGACGTATAATGTGCTGCCTAGTA 59.419 41.667 0.00 0.00 0.00 1.82
4700 11803 2.606587 GGGAGCCACACATGAGGGT 61.607 63.158 0.00 3.65 39.16 4.34
4707 11810 3.640407 GCCTGAGGGAGCCACACA 61.640 66.667 0.00 0.00 33.58 3.72
4731 11834 1.187567 GCAGCCCACTTTTGGTCCAT 61.188 55.000 0.00 0.00 42.10 3.41
4734 11837 0.681175 ATTGCAGCCCACTTTTGGTC 59.319 50.000 0.00 0.00 42.10 4.02
4738 11841 5.118286 GCAATTATATTGCAGCCCACTTTT 58.882 37.500 17.03 0.00 44.34 2.27
4754 11857 1.379309 ACCCGGTTGGCGCAATTAT 60.379 52.632 10.83 0.00 37.83 1.28
4761 11864 2.281208 TTCAAGACCCGGTTGGCG 60.281 61.111 0.00 0.00 37.83 5.69
4843 11946 3.386078 GCATAGTCTCTTCCATCAGGTCA 59.614 47.826 0.00 0.00 35.89 4.02
4846 12137 4.040095 TGATGCATAGTCTCTTCCATCAGG 59.960 45.833 0.00 0.00 35.50 3.86
4849 12140 4.953667 TGTGATGCATAGTCTCTTCCATC 58.046 43.478 0.00 0.00 0.00 3.51
4863 12154 5.175127 AGTGTTGACGTATAATGTGATGCA 58.825 37.500 0.00 0.00 0.00 3.96
4867 12158 4.382254 GGGGAGTGTTGACGTATAATGTGA 60.382 45.833 0.00 0.00 0.00 3.58
4908 12199 2.420568 CGGTCCACGCTTAGGCCTA 61.421 63.158 8.91 8.91 34.82 3.93
4917 12208 3.047877 CCCACTTTCGGTCCACGC 61.048 66.667 0.00 0.00 43.86 5.34
4922 12213 1.244019 ATTGCAGCCCACTTTCGGTC 61.244 55.000 0.00 0.00 0.00 4.79
4942 12233 1.076777 ACCTGGCTGGCGCAATTAT 60.077 52.632 10.83 0.00 40.22 1.28
4949 12240 2.032528 TTCAAGACCTGGCTGGCG 59.967 61.111 10.71 0.00 40.22 5.69
5022 12313 1.678627 ACCATCGGATCAGTCTCTTCG 59.321 52.381 0.00 0.00 0.00 3.79
5023 12314 3.118956 ACAACCATCGGATCAGTCTCTTC 60.119 47.826 0.00 0.00 0.00 2.87
5026 12317 2.969628 ACAACCATCGGATCAGTCTC 57.030 50.000 0.00 0.00 0.00 3.36
5031 12322 2.172505 AGCCAATACAACCATCGGATCA 59.827 45.455 0.00 0.00 0.00 2.92
5036 12327 4.060038 ACTCTAGCCAATACAACCATCG 57.940 45.455 0.00 0.00 0.00 3.84
5037 12328 5.409826 GCATACTCTAGCCAATACAACCATC 59.590 44.000 0.00 0.00 0.00 3.51
5038 12329 5.163205 TGCATACTCTAGCCAATACAACCAT 60.163 40.000 0.00 0.00 0.00 3.55
5039 12330 4.163268 TGCATACTCTAGCCAATACAACCA 59.837 41.667 0.00 0.00 0.00 3.67
5040 12331 4.511826 GTGCATACTCTAGCCAATACAACC 59.488 45.833 0.00 0.00 0.00 3.77
5041 12332 5.360591 AGTGCATACTCTAGCCAATACAAC 58.639 41.667 0.00 0.00 28.79 3.32
5042 12333 5.614324 AGTGCATACTCTAGCCAATACAA 57.386 39.130 0.00 0.00 28.79 2.41
5043 12334 5.363868 AGAAGTGCATACTCTAGCCAATACA 59.636 40.000 0.00 0.00 35.69 2.29
5044 12335 5.848406 AGAAGTGCATACTCTAGCCAATAC 58.152 41.667 0.00 0.00 35.69 1.89
5045 12336 6.549736 TGTAGAAGTGCATACTCTAGCCAATA 59.450 38.462 0.00 0.00 35.69 1.90
5046 12337 5.363868 TGTAGAAGTGCATACTCTAGCCAAT 59.636 40.000 0.00 0.00 35.69 3.16
5047 12338 4.709886 TGTAGAAGTGCATACTCTAGCCAA 59.290 41.667 0.00 0.00 35.69 4.52
5048 12339 4.278310 TGTAGAAGTGCATACTCTAGCCA 58.722 43.478 0.00 0.00 35.69 4.75
5049 12340 4.920640 TGTAGAAGTGCATACTCTAGCC 57.079 45.455 0.00 0.00 35.69 3.93
5050 12341 6.276847 ACAATGTAGAAGTGCATACTCTAGC 58.723 40.000 0.00 0.00 35.69 3.42
5051 12342 6.634837 CGACAATGTAGAAGTGCATACTCTAG 59.365 42.308 0.00 0.00 35.69 2.43
5052 12343 6.317893 TCGACAATGTAGAAGTGCATACTCTA 59.682 38.462 0.00 0.00 35.69 2.43
5053 12344 5.125578 TCGACAATGTAGAAGTGCATACTCT 59.874 40.000 0.00 0.00 35.69 3.24
5054 12345 5.340803 TCGACAATGTAGAAGTGCATACTC 58.659 41.667 0.00 0.00 35.69 2.59
5055 12346 5.324784 TCGACAATGTAGAAGTGCATACT 57.675 39.130 0.00 0.00 39.32 2.12
5056 12347 5.108217 CGATCGACAATGTAGAAGTGCATAC 60.108 44.000 10.26 0.00 0.00 2.39
5057 12348 4.976116 CGATCGACAATGTAGAAGTGCATA 59.024 41.667 10.26 0.00 0.00 3.14
5058 12349 3.798878 CGATCGACAATGTAGAAGTGCAT 59.201 43.478 10.26 0.00 0.00 3.96
5059 12350 3.119637 TCGATCGACAATGTAGAAGTGCA 60.120 43.478 15.15 0.00 0.00 4.57
5060 12351 3.435566 TCGATCGACAATGTAGAAGTGC 58.564 45.455 15.15 0.00 0.00 4.40
5061 12352 7.679659 TTTATCGATCGACAATGTAGAAGTG 57.320 36.000 22.06 0.00 0.00 3.16
5062 12353 8.873215 ATTTTATCGATCGACAATGTAGAAGT 57.127 30.769 22.06 2.03 0.00 3.01
5063 12354 8.968242 TGATTTTATCGATCGACAATGTAGAAG 58.032 33.333 22.06 0.00 0.00 2.85
5064 12355 8.865590 TGATTTTATCGATCGACAATGTAGAA 57.134 30.769 22.06 10.24 0.00 2.10
5065 12356 8.865590 TTGATTTTATCGATCGACAATGTAGA 57.134 30.769 22.06 0.60 0.00 2.59
5097 12388 9.678941 GGATTAGAAATTAATTGGAAATCGGTC 57.321 33.333 0.39 0.00 0.00 4.79
5098 12389 9.421399 AGGATTAGAAATTAATTGGAAATCGGT 57.579 29.630 0.39 1.05 0.00 4.69
5117 12408 7.900069 AGCGTTTCGGTCAGCTAAGGATTAG 62.900 48.000 0.00 0.00 42.01 1.73
5118 12409 3.777478 CGTTTCGGTCAGCTAAGGATTA 58.223 45.455 0.00 0.00 0.00 1.75
5119 12410 2.618053 CGTTTCGGTCAGCTAAGGATT 58.382 47.619 0.00 0.00 0.00 3.01
5120 12411 1.739371 GCGTTTCGGTCAGCTAAGGAT 60.739 52.381 0.00 0.00 0.00 3.24
5121 12412 0.389426 GCGTTTCGGTCAGCTAAGGA 60.389 55.000 0.00 0.00 0.00 3.36
5122 12413 0.389948 AGCGTTTCGGTCAGCTAAGG 60.390 55.000 0.00 0.00 38.29 2.69
5123 12414 2.273370 TAGCGTTTCGGTCAGCTAAG 57.727 50.000 0.00 0.00 38.99 2.18
5124 12415 2.288334 TGTTAGCGTTTCGGTCAGCTAA 60.288 45.455 10.58 10.58 46.11 3.09
5125 12416 1.270274 TGTTAGCGTTTCGGTCAGCTA 59.730 47.619 0.00 0.00 40.73 3.32
5126 12417 0.032952 TGTTAGCGTTTCGGTCAGCT 59.967 50.000 0.00 2.46 43.07 4.24
5127 12418 0.863144 TTGTTAGCGTTTCGGTCAGC 59.137 50.000 0.00 0.00 38.83 4.26
5128 12419 1.862201 TGTTGTTAGCGTTTCGGTCAG 59.138 47.619 0.00 0.00 38.83 3.51
5129 12420 1.937278 TGTTGTTAGCGTTTCGGTCA 58.063 45.000 0.00 0.00 38.83 4.02
5130 12421 3.285745 CTTTGTTGTTAGCGTTTCGGTC 58.714 45.455 0.00 0.00 38.83 4.79
5131 12422 2.540157 GCTTTGTTGTTAGCGTTTCGGT 60.540 45.455 0.00 0.00 41.50 4.69
5132 12423 2.041244 GCTTTGTTGTTAGCGTTTCGG 58.959 47.619 0.00 0.00 0.00 4.30
5133 12424 2.041244 GGCTTTGTTGTTAGCGTTTCG 58.959 47.619 0.00 0.00 38.28 3.46
5134 12425 3.073144 TGGCTTTGTTGTTAGCGTTTC 57.927 42.857 0.00 0.00 38.28 2.78
5135 12426 3.726291 ATGGCTTTGTTGTTAGCGTTT 57.274 38.095 0.00 0.00 38.28 3.60
5136 12427 4.142469 GGATATGGCTTTGTTGTTAGCGTT 60.142 41.667 0.00 0.00 38.28 4.84
5137 12428 3.377172 GGATATGGCTTTGTTGTTAGCGT 59.623 43.478 0.00 0.00 38.28 5.07
5138 12429 3.627577 AGGATATGGCTTTGTTGTTAGCG 59.372 43.478 0.00 0.00 38.28 4.26
5139 12430 4.640201 TGAGGATATGGCTTTGTTGTTAGC 59.360 41.667 0.00 0.00 36.66 3.09
5140 12431 6.150976 TGTTGAGGATATGGCTTTGTTGTTAG 59.849 38.462 0.00 0.00 0.00 2.34
5141 12432 6.007076 TGTTGAGGATATGGCTTTGTTGTTA 58.993 36.000 0.00 0.00 0.00 2.41
5142 12433 4.832266 TGTTGAGGATATGGCTTTGTTGTT 59.168 37.500 0.00 0.00 0.00 2.83
5143 12434 4.406456 TGTTGAGGATATGGCTTTGTTGT 58.594 39.130 0.00 0.00 0.00 3.32
5144 12435 5.587388 ATGTTGAGGATATGGCTTTGTTG 57.413 39.130 0.00 0.00 0.00 3.33
5145 12436 5.716228 TCAATGTTGAGGATATGGCTTTGTT 59.284 36.000 0.00 0.00 32.50 2.83
5146 12437 5.263599 TCAATGTTGAGGATATGGCTTTGT 58.736 37.500 0.00 0.00 32.50 2.83
5147 12438 5.840243 TCAATGTTGAGGATATGGCTTTG 57.160 39.130 0.00 0.00 32.50 2.77
5148 12439 7.293073 AGTATCAATGTTGAGGATATGGCTTT 58.707 34.615 1.65 0.00 41.08 3.51
5149 12440 6.845908 AGTATCAATGTTGAGGATATGGCTT 58.154 36.000 1.65 0.00 41.08 4.35
5150 12441 6.445451 AGTATCAATGTTGAGGATATGGCT 57.555 37.500 1.65 0.00 41.08 4.75
5151 12442 6.314896 GCTAGTATCAATGTTGAGGATATGGC 59.685 42.308 1.65 0.00 41.08 4.40
5152 12443 7.619050 AGCTAGTATCAATGTTGAGGATATGG 58.381 38.462 1.65 0.00 41.08 2.74
5155 12446 9.588096 TCTTAGCTAGTATCAATGTTGAGGATA 57.412 33.333 1.65 0.00 41.08 2.59
5156 12447 8.364142 GTCTTAGCTAGTATCAATGTTGAGGAT 58.636 37.037 1.65 0.00 41.08 3.24
5157 12448 7.201920 GGTCTTAGCTAGTATCAATGTTGAGGA 60.202 40.741 1.65 0.00 41.08 3.71
5158 12449 6.926272 GGTCTTAGCTAGTATCAATGTTGAGG 59.074 42.308 1.65 0.00 41.08 3.86
5159 12450 7.721402 AGGTCTTAGCTAGTATCAATGTTGAG 58.279 38.462 1.65 0.00 41.08 3.02
5160 12451 7.661536 AGGTCTTAGCTAGTATCAATGTTGA 57.338 36.000 0.00 0.00 42.14 3.18
5161 12452 8.723942 AAAGGTCTTAGCTAGTATCAATGTTG 57.276 34.615 0.00 0.00 0.00 3.33
5162 12453 9.167311 CAAAAGGTCTTAGCTAGTATCAATGTT 57.833 33.333 0.00 0.00 0.00 2.71
5163 12454 8.723942 CAAAAGGTCTTAGCTAGTATCAATGT 57.276 34.615 0.00 0.00 0.00 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.